ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39g14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AROG_LYCES (P37216) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 216 4e-56
2AROF_SOLTU (P21357) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 216 6e-56
3AROF_TOBAC (P27608) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 215 7e-56
4AROG_SOLTU (P37822) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 212 6e-55
5AROF_LYCES (P37215) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 206 4e-53
6AROF_ARATH (P29976) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 205 1e-52
7AROG_ARATH (Q00218) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 201 2e-51
8AROF_STRCO (P80574) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 141 1e-33
9AROF_STRLI (P55911) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 135 7e-32
10AROF_NEUCR (P80576) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 111 1e-24
11PHZC_PSEFL (Q51789) Probable phospho-2-dehydro-3-deoxyheptonate ... 83 7e-16
12PHZC_PSECL (Q51517) Probable phospho-2-dehydro-3-deoxyheptonate ... 80 4e-15
13GSPL_PSEAE (P25060) General secretion pathway protein L 31 2.6
14MTR1L_SHEEP (Q28558) Melatonin-related receptor (G protein-coupl... 30 7.5
15NMT1_RAT (Q8K1Q0) Glycylpeptide N-tetradecanoyltransferase 1 (EC... 30 7.5
16NMT1_PONPY (Q5RAF3) Glycylpeptide N-tetradecanoyltransferase 1 (... 30 7.5
17NMT1_MOUSE (O70310) Glycylpeptide N-tetradecanoyltransferase 1 (... 30 7.5
18NMT1_HUMAN (P30419) Glycylpeptide N-tetradecanoyltransferase 1 (... 30 7.5
19NMT1_BOVIN (P31717) Glycylpeptide N-tetradecanoyltransferase 1 (... 30 7.5 
>AROG_LYCES (P37216) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast|
           precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate
           aldolase 2) (DAHP synthetase 2)
           (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2)
          Length = 541

 Score =  216 bits (550), Expect = 4e-56
 Identities = 101/113 (89%), Positives = 106/113 (93%)
 Frame = -2

Query: 619 GQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNV 440
           GQIVTW++DPMHGNTIKAPCGLKTRPFDSI  EVRAFFDVHDQEGSHPGG+HLEMTGQNV
Sbjct: 426 GQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNV 485

Query: 439 TECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKSGLT 281
           TECIGGSRTVTFDDL  RYHTHCDPRLNASQSLEL+FIIAERLRKRR+ S  T
Sbjct: 486 TECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRLGSQST 538
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>AROF_SOLTU (P21357) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast|
           precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate
           aldolase 1) (DAHP synthetase 1)
           (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1)
          Length = 538

 Score =  216 bits (549), Expect = 6e-56
 Identities = 100/110 (90%), Positives = 105/110 (95%)
 Frame = -2

Query: 619 GQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNV 440
           GQIVTW++DPMHGNTIKAPCGLKTRPFDSI  EVRAFFDVHDQEGSHPGG+HLEMTGQNV
Sbjct: 426 GQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNV 485

Query: 439 TECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKS 290
           TECIGGSRTVTFDDL  RYHTHCDPRLNASQSLEL+FIIAERLRKRR+ S
Sbjct: 486 TECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRLGS 535
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>AROF_TOBAC (P27608) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast|
           precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate
           aldolase 1) (DAHP synthetase 1)
           (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1)
          Length = 542

 Score =  215 bits (548), Expect = 7e-56
 Identities = 100/110 (90%), Positives = 105/110 (95%)
 Frame = -2

Query: 619 GQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNV 440
           GQIVTW++DPMHGNTIKAPCGLKTRPFDSI  EVRAFFDVH+QEGSHPGG+HLEMTGQNV
Sbjct: 427 GQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNV 486

Query: 439 TECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKS 290
           TECIGGSRTVTFDDL  RYHTHCDPRLNASQSLELAFIIAERLRKRR+ S
Sbjct: 487 TECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRLGS 536
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>AROG_SOLTU (P37822) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast|
           precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate
           aldolase 2) (DAHP synthetase 2)
           (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2)
          Length = 511

 Score =  212 bits (540), Expect = 6e-55
 Identities = 97/110 (88%), Positives = 105/110 (95%)
 Frame = -2

Query: 619 GQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNV 440
           GQIVTW+ DPMHGNTIKAPCGLKTR FDSI+ EVRAFFDVH+QEGSHPGGIHLEMTGQNV
Sbjct: 399 GQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFFDVHEQEGSHPGGIHLEMTGQNV 458

Query: 439 TECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKS 290
           TECIGGSRTVT+DDLG RYHTHCDPRLNASQSLEL+FI+AERLR+RRM +
Sbjct: 459 TECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRMST 508
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>AROF_LYCES (P37215) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast|
           precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate
           aldolase 1) (DAHP synthetase 1)
           (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1)
          Length = 511

 Score =  206 bits (524), Expect = 4e-53
 Identities = 96/110 (87%), Positives = 102/110 (92%)
 Frame = -2

Query: 619 GQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNV 440
           GQIVTW+ DPMHGNTIKAPCGLKTR FDSI  EVRAFFDVH+QEGSHP  IHLEMTGQNV
Sbjct: 399 GQIVTWVCDPMHGNTIKAPCGLKTRAFDSIQAEVRAFFDVHEQEGSHPWCIHLEMTGQNV 458

Query: 439 TECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKS 290
           TECIGGSRTVT+DDLG RYHTHCDPRLNASQSLEL+FI+AERLR+RRM S
Sbjct: 459 TECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRMSS 508
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>AROF_ARATH (P29976) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast|
           precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate
           aldolase 1) (DAHP synthetase 1)
           (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1)
          Length = 525

 Score =  205 bits (521), Expect = 1e-52
 Identities = 96/110 (87%), Positives = 101/110 (91%)
 Frame = -2

Query: 619 GQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNV 440
           GQIVTW+ DPMHGNTIKAPCGLKTR FDSI+ EVRAF DVH+QEGSH GGIHLEMTGQNV
Sbjct: 412 GQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFLDVHEQEGSHAGGIHLEMTGQNV 471

Query: 439 TECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKS 290
           TECIGGSRTVT+DDL  RYHTHCDPRLNASQSLELAFI+AERLRKRR  S
Sbjct: 472 TECIGGSRTVTYDDLSSRYHTHCDPRLNASQSLELAFIVAERLRKRRTGS 521
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>AROG_ARATH (Q00218) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast|
           precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate
           aldolase 2) (DAHP synthetase 2)
           (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2)
          Length = 507

 Score =  201 bits (510), Expect = 2e-51
 Identities = 95/117 (81%), Positives = 105/117 (89%)
 Frame = -2

Query: 619 GQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNV 440
           GQIVTW++DPMHGNTI AP GLKTR FD+I  E+RAFFDVHDQEGS PGG+HLEMTGQNV
Sbjct: 389 GQIVTWVSDPMHGNTIMAPGGLKTRSFDAIRAELRAFFDVHDQEGSFPGGVHLEMTGQNV 448

Query: 439 TECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKSGLTNNLP 269
           TEC+GGSRT+T++DL  RYHTHCDPRLNASQSLELAFIIAERLRKRR+ SG   NLP
Sbjct: 449 TECVGGSRTITYNDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRLGSG---NLP 502
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>AROF_STRCO (P80574) Phospho-2-dehydro-3-deoxyheptonate aldolase (EC 2.5.1.54)|
           (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP
           synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate
           synthase)
          Length = 449

 Score =  141 bits (356), Expect = 1e-33
 Identities = 63/104 (60%), Positives = 78/104 (75%)
 Frame = -2

Query: 619 GQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNV 440
           G  V WITDPMHGNT +A  G KTR FD +++EV+ FF+VH   G+HPGGIH+E+TG +V
Sbjct: 344 GATVAWITDPMHGNTYEAASGHKTRRFDDVLDEVKGFFEVHKSLGTHPGGIHVELTGDDV 403

Query: 439 TECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLR 308
           TEC+GG   +  DDL  RY T CDPRLN SQSL+LAF++AE  R
Sbjct: 404 TECVGGGDEIFVDDLHQRYETACDPRLNRSQSLDLAFLVAEMYR 447
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>AROF_STRLI (P55911) Phospho-2-dehydro-3-deoxyheptonate aldolase (EC 2.5.1.54)|
           (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP
           synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate
           synthase) (Fragment)
          Length = 146

 Score =  135 bits (341), Expect = 7e-32
 Identities = 61/101 (60%), Positives = 76/101 (75%)
 Frame = -2

Query: 610 VTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVTEC 431
           V WITDPMHGNT +A    KTR FD +++EV+ FF+VH   G+HPGGIH+E+TG +VTEC
Sbjct: 44  VAWITDPMHGNTYEAAPVHKTRRFDDVLDEVKGFFEVHKSLGTHPGGIHVELTGDDVTEC 103

Query: 430 IGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLR 308
           +GG   +  DDL  RY T CDPRLN SQSL+LAF++AE  R
Sbjct: 104 VGGGDEIFVDDLHQRYETACDPRLNRSQSLDLAFLVAEMYR 144
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>AROF_NEUCR (P80576) Phospho-2-dehydro-3-deoxyheptonate aldolase (EC 2.5.1.54)|
           (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP
           synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate
           synthase)
          Length = 481

 Score =  111 bits (278), Expect = 1e-24
 Identities = 51/104 (49%), Positives = 68/104 (65%)
 Frame = -2

Query: 610 VTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVTEC 431
           V W  DPMHGNT     G+KTR F  I +E++    +H +E S+ GG+HLE+TG  VTEC
Sbjct: 365 VVWQCDPMHGNTQSVSGGIKTRKFSDIFSELQQTLRIHKEEKSYLGGMHLELTGDAVTEC 424

Query: 430 IGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRR 299
           +GG   +  DDL   Y + CDPRLN  Q+LELAF++A+  R+ R
Sbjct: 425 LGGGAGLDEDDLSTNYTSFCDPRLNEKQALELAFLVADHYRQER 468
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>PHZC_PSEFL (Q51789) Probable phospho-2-dehydro-3-deoxyheptonate aldolase (EC|
           2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase)
           (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate
           7-phosphate synthase)
          Length = 400

 Score = 82.8 bits (203), Expect = 7e-16
 Identities = 41/93 (44%), Positives = 54/93 (58%)
 Frame = -2

Query: 619 GQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNV 440
           G  + W++DPMHGNTI APCG KTR   +I +E+ AF       G   GG+HLE T  +V
Sbjct: 293 GHKIIWLSDPMHGNTIVAPCGNKTRMVQTITDEITAFKHAVVSAGGVAGGLHLETTPDDV 352

Query: 439 TECIGGSRTVTFDDLGDRYHTHCDPRLNASQSL 341
           +EC   S       +G  Y + CDPRLN  Q++
Sbjct: 353 SEC--ASDAAGLGQVGSHYKSLCDPRLNPWQAI 383
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>PHZC_PSECL (Q51517) Probable phospho-2-dehydro-3-deoxyheptonate aldolase (EC|
           2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase)
           (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate
           7-phosphate synthase)
          Length = 400

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 40/93 (43%), Positives = 52/93 (55%)
 Frame = -2

Query: 619 GQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNV 440
           G  + W++DPMHGNTI APCG KTR   +I  E+ AF       G    G+HLE T  +V
Sbjct: 293 GHKIIWLSDPMHGNTIVAPCGNKTRMVQAITEEIAAFKHAVTSAGGVAAGLHLETTPDDV 352

Query: 439 TECIGGSRTVTFDDLGDRYHTHCDPRLNASQSL 341
           +EC   S       +  RY + CDPRLN  Q++
Sbjct: 353 SEC--ASDAAGLHQVASRYKSLCDPRLNPWQAI 383
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>GSPL_PSEAE (P25060) General secretion pathway protein L|
          Length = 382

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = -2

Query: 544 PFDSIMNEVRAFFDVHDQEGSHPGGIH--LEMTGQNVTECIGGSRTVTFDDLGDRYHTHC 371
           P D  +  +RA FD H  + +  GG    L + GQ  T  IGG  TV+ + L D      
Sbjct: 277 PEDRKLINLRAQFDQHLADSASSGGEGQLLGLLGQAAT-VIGGEPTVSVEQL-DFSAARG 334

Query: 370 DPRLNASQSLELAFIIAERLRKRRMKSGLTNNL 272
           D  L         F + ERLR R  +SGL   L
Sbjct: 335 DVALQVRAP---GFDVLERLRSRLSESGLAVQL 364
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>MTR1L_SHEEP (Q28558) Melatonin-related receptor (G protein-coupled receptor 50)|
           (H9)
          Length = 575

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
 Frame = +1

Query: 355 HSALGRSECGSGHP----GHRRSRSA 420
           H A G+ EC SGHP    GH RS SA
Sbjct: 373 HGAAGQPECVSGHPKPASGHSRSVSA 398
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>NMT1_RAT (Q8K1Q0) Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97)|
           (Peptide N-myristoyltransferase 1)
           (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1)
           (Type I N-myristoyltransferase)
          Length = 496

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
 Frame = +3

Query: 420 DPPMHSVTFCPVISRWM--PPGWLPSWSC 500
           D  M    + P    W   PPGWLP W C
Sbjct: 184 DDNMFRFDYSPEFLLWALRPPGWLPQWHC 212
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>NMT1_PONPY (Q5RAF3) Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97)|
           (Peptide N-myristoyltransferase 1)
           (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1)
           (Type I N-myristoyltransferase)
          Length = 496

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
 Frame = +3

Query: 420 DPPMHSVTFCPVISRWM--PPGWLPSWSC 500
           D  M    + P    W   PPGWLP W C
Sbjct: 184 DDNMFRFDYSPEFLLWALRPPGWLPQWHC 212
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>NMT1_MOUSE (O70310) Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97)|
           (Peptide N-myristoyltransferase 1)
           (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1)
           (Type I N-myristoyltransferase)
          Length = 496

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
 Frame = +3

Query: 420 DPPMHSVTFCPVISRWM--PPGWLPSWSC 500
           D  M    + P    W   PPGWLP W C
Sbjct: 184 DDNMFRFDYSPEFLLWALRPPGWLPQWHC 212
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>NMT1_HUMAN (P30419) Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97)|
           (Peptide N-myristoyltransferase 1)
           (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1)
           (Type I N-myristoyltransferase)
          Length = 496

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
 Frame = +3

Query: 420 DPPMHSVTFCPVISRWM--PPGWLPSWSC 500
           D  M    + P    W   PPGWLP W C
Sbjct: 184 DDNMFRFDYSPEFLLWALRPPGWLPQWHC 212
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>NMT1_BOVIN (P31717) Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97)|
           (Peptide N-myristoyltransferase 1)
           (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1)
           (Type I N-myristoyltransferase)
          Length = 497

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
 Frame = +3

Query: 420 DPPMHSVTFCPVISRWM--PPGWLPSWSC 500
           D  M    + P    W   PPGWLP W C
Sbjct: 184 DDNMFRFDYSPEFLLWALRPPGWLPQWHC 212


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,412,960
Number of Sequences: 219361
Number of extensions: 2004207
Number of successful extensions: 5482
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5478
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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