ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466532.1| Oryza sativa (japonica cultivar-group), mRNA 163 7e-37
2dbj|AK073510.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 7e-37
3gb|BT018018.1| Zea mays clone EL01N0529A07.c mRNA sequence 161 3e-36
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
5dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
6dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
7emb|CT010524.6| Mouse DNA sequence from clone RP23-341L7 on chro... 46 0.11
8emb|AL590103.12| Human DNA sequence from clone RP11-132G19 on ch... 42 1.6
9gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complet... 42 1.6
10ref|XM_479149.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
11ref|XM_507390.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.5
12ref|XM_506462.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.5
13gb|AC073325.9| Homo sapiens BAC clone RP11-351I12 from 7, comple... 40 6.5
14gb|AC145090.1| Pan troglodytes BAC clone RP43-2G11 from 7, compl... 40 6.5
15gb|AC144431.11| Medicago truncatula clone mth2-21i14, complete s... 40 6.5
16emb|AL122000.11|HSJ572F19 Human DNA sequence from clone RP4-572F... 40 6.5
17gb|AC108699.3| Homo sapiens 3q BAC RP11-13I12 (Roswell Park Canc... 40 6.5
18emb|Y07661.1|HSUSF2 H.sapiens USF2 gene 40 6.5
19gb|AC092663.2| Homo sapiens BAC clone RP11-517B1 from 4, complet... 40 6.5
20gb|AC092336.2| Homo sapiens chromosome 5 clone RP11-1C1, complet... 40 6.5
21gb|AD000684.1|CH19R30879 Homo sapiens DNA from chromosome 19-cos... 40 6.5
22dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
23gb|AC012496.10| Homo sapiens BAC clone RP11-341N18 from 2, compl... 40 6.5
24gb|AC005036.1| Homo sapiens BAC clone RP11-364H22 from 2, comple... 40 6.5
25dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
26dbj|AK102448.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
27dbj|AK069145.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
28dbj|AK058885.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
29gb|AC005924.2|AC005924 Homo sapiens Chr.14 PAC RPCI4-794B2 (Rosw... 40 6.5
30emb|AL132838.4|CNS01DTQ Human chromosome 14 DNA sequence BAC R-8... 40 6.5
31emb|CR955007.2| Medicago truncatula chromosome 5 clone mte1-58b2... 40 6.5
32gb|AC150390.2| Branchiostoma floridae clone CH302-115N8, complet... 40 6.5
33emb|AL844210.7| Mouse DNA sequence from clone RP23-235I13 on chr... 40 6.5
34dbj|AB032062.1| Oryza sativa (japonica cultivar-group) OsPAA2 mR... 40 6.5 
>ref|XM_466532.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2561

 Score =  163 bits (82), Expect = 7e-37
 Identities = 195/233 (83%)
 Strand = Plus / Minus

                                                                        
Query: 209  gatagcagctgctgggcgaggtactgcccttctggctcctccagataaattttgtcatcc 268
            ||||| ||||| || || |||||||| |||||||| ||||| || ||||  ||||||  |
Sbjct: 2163 gatagaagctgttgcgcaaggtactggccttctggttcctcaaggtaaaccttgtcagtc 2104

                                                                        
Query: 269  agataattttgtagattattgatagcttctggctgaactttcgagccttgtgctttcaaa 328
            |||||||| ||||||||| |   ||| || | ||||| |   ||||||||| | ||||||
Sbjct: 2103 agataattctgtagattacttgcagcctcagcctgaattcgtgagccttgttccttcaaa 2044

                                                                        
Query: 329  gctggtatgaagtgccgngatattacatctagaattttcatgaactgtgatccatatttc 388
            || |||| ||||  |||  ||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 2043 gcgggtaagaagcaccgcaatattacatctagaagtttcatgaactgtgatccgtatttc 1984

                                                                 
Query: 389  ttgtgaagcgcaaaaccagccaccttgaggaaagcatgaagagcaaaagcagt 441
            |||||||| ||||||||||| |||||||||||||||||||| ||| |||||||
Sbjct: 1983 ttgtgaagtgcaaaaccagcaaccttgaggaaagcatgaagggcacaagcagt 1931
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>dbj|AK073510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046G18, full
            insert sequence
          Length = 2561

 Score =  163 bits (82), Expect = 7e-37
 Identities = 195/233 (83%)
 Strand = Plus / Minus

                                                                        
Query: 209  gatagcagctgctgggcgaggtactgcccttctggctcctccagataaattttgtcatcc 268
            ||||| ||||| || || |||||||| |||||||| ||||| || ||||  ||||||  |
Sbjct: 2163 gatagaagctgttgcgcaaggtactggccttctggttcctcaaggtaaaccttgtcagtc 2104

                                                                        
Query: 269  agataattttgtagattattgatagcttctggctgaactttcgagccttgtgctttcaaa 328
            |||||||| ||||||||| |   ||| || | ||||| |   ||||||||| | ||||||
Sbjct: 2103 agataattctgtagattacttgcagcctcagcctgaattcgtgagccttgttccttcaaa 2044

                                                                        
Query: 329  gctggtatgaagtgccgngatattacatctagaattttcatgaactgtgatccatatttc 388
            || |||| ||||  |||  ||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 2043 gcgggtaagaagcaccgcaatattacatctagaagtttcatgaactgtgatccgtatttc 1984

                                                                 
Query: 389  ttgtgaagcgcaaaaccagccaccttgaggaaagcatgaagagcaaaagcagt 441
            |||||||| ||||||||||| |||||||||||||||||||| ||| |||||||
Sbjct: 1983 ttgtgaagtgcaaaaccagcaaccttgaggaaagcatgaagggcacaagcagt 1931
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>gb|BT018018.1| Zea mays clone EL01N0529A07.c mRNA sequence
          Length = 1102

 Score =  161 bits (81), Expect = 3e-36
 Identities = 200/240 (83%)
 Strand = Plus / Minus

                                                                       
Query: 205 tttcgatagcagctgctgggcgaggtactgcccttctggctcctccagataaattttgtc 264
           ||||||||| |  |||||| ||||||||||||||||||| |||||||| || || |||||
Sbjct: 787 tttcgatagtaattgctggacgaggtactgcccttctggttcctccaggtagatcttgtc 728

                                                                       
Query: 265 atccagataattttgtagattattgatagcttctggctgaactttcgagccttgtgcttt 324
            | ||||||||| |||||||| |||| ||| || | ||| |  ||   ||||||| | ||
Sbjct: 727 gttcagataattctgtagattgttgacagcctcagcctgcatcttgttgccttgttcctt 668

                                                                       
Query: 325 caaagctggtatgaagtgccgngatattacatctagaattttcatgaactgtgatccata 384
           |||||| ||||  |||| ||| || || |||| ||| |||||||||||||| ||||||||
Sbjct: 667 caaagccggtaaaaagtaccgtgaaatcacatataggattttcatgaactgcgatccata 608

                                                                       
Query: 385 tttcttgtgaagcgcaaaaccagccaccttgaggaaagcatgaagagcaaaagcagtggc 444
           |||||||||||| ||||||||||||| ||||||||| || ||||| ||| ||||||||||
Sbjct: 607 tttcttgtgaagtgcaaaaccagccatcttgaggaaggcgtgaagggcacaagcagtggc 548
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  123 bits (62), Expect = 6e-25
 Identities = 169/205 (82%)
 Strand = Plus / Plus

                                                                            
Query: 209      gatagcagctgctgggcgaggtactgcccttctggctcctccagataaattttgtcatcc 268
                ||||| ||||| || || |||||||| |||||||| ||||| || ||||  ||||||  |
Sbjct: 23151908 gatagaagctgttgcgcaaggtactggccttctggttcctcaaggtaaaccttgtcagtc 23151967

                                                                            
Query: 269      agataattttgtagattattgatagcttctggctgaactttcgagccttgtgctttcaaa 328
                |||||||| ||||||||| |   ||| || | ||||| |   ||||||||| | ||||||
Sbjct: 23151968 agataattctgtagattacttgcagcctcagcctgaattcgtgagccttgttccttcaaa 23152027

                                                                            
Query: 329      gctggtatgaagtgccgngatattacatctagaattttcatgaactgtgatccatatttc 388
                || |||| ||||  |||  ||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 23152028 gcgggtaagaagcaccgcaatattacatctagaagtttcatgaactgtgatccgtatttc 23152087

                                         
Query: 389      ttgtgaagcgcaaaaccagccacct 413
                |||||||| ||||||||||| ||||
Sbjct: 23152088 ttgtgaagtgcaaaaccagcaacct 23152112



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 410      accttgaggaaagcatgaagagcaaaagcagt 441
                |||||||||||||||||||| ||| |||||||
Sbjct: 23152201 accttgaggaaagcatgaagggcacaagcagt 23152232
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>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1126_D09
          Length = 138615

 Score =  123 bits (62), Expect = 6e-25
 Identities = 169/205 (82%)
 Strand = Plus / Plus

                                                                          
Query: 209    gatagcagctgctgggcgaggtactgcccttctggctcctccagataaattttgtcatcc 268
              ||||| ||||| || || |||||||| |||||||| ||||| || ||||  ||||||  |
Sbjct: 118946 gatagaagctgttgcgcaaggtactggccttctggttcctcaaggtaaaccttgtcagtc 119005

                                                                          
Query: 269    agataattttgtagattattgatagcttctggctgaactttcgagccttgtgctttcaaa 328
              |||||||| ||||||||| |   ||| || | ||||| |   ||||||||| | ||||||
Sbjct: 119006 agataattctgtagattacttgcagcctcagcctgaattcgtgagccttgttccttcaaa 119065

                                                                          
Query: 329    gctggtatgaagtgccgngatattacatctagaattttcatgaactgtgatccatatttc 388
              || |||| ||||  |||  ||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 119066 gcgggtaagaagcaccgcaatattacatctagaagtttcatgaactgtgatccgtatttc 119125

                                       
Query: 389    ttgtgaagcgcaaaaccagccacct 413
              |||||||| ||||||||||| ||||
Sbjct: 119126 ttgtgaagtgcaaaaccagcaacct 119150



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 410    accttgaggaaagcatgaagagcaaaagcagt 441
              |||||||||||||||||||| ||| |||||||
Sbjct: 119239 accttgaggaaagcatgaagggcacaagcagt 119270
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>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1568_B05
          Length = 115325

 Score =  123 bits (62), Expect = 6e-25
 Identities = 169/205 (82%)
 Strand = Plus / Plus

                                                                        
Query: 209  gatagcagctgctgggcgaggtactgcccttctggctcctccagataaattttgtcatcc 268
            ||||| ||||| || || |||||||| |||||||| ||||| || ||||  ||||||  |
Sbjct: 9139 gatagaagctgttgcgcaaggtactggccttctggttcctcaaggtaaaccttgtcagtc 9198

                                                                        
Query: 269  agataattttgtagattattgatagcttctggctgaactttcgagccttgtgctttcaaa 328
            |||||||| ||||||||| |   ||| || | ||||| |   ||||||||| | ||||||
Sbjct: 9199 agataattctgtagattacttgcagcctcagcctgaattcgtgagccttgttccttcaaa 9258

                                                                        
Query: 329  gctggtatgaagtgccgngatattacatctagaattttcatgaactgtgatccatatttc 388
            || |||| ||||  |||  ||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 9259 gcgggtaagaagcaccgcaatattacatctagaagtttcatgaactgtgatccgtatttc 9318

                                     
Query: 389  ttgtgaagcgcaaaaccagccacct 413
            |||||||| ||||||||||| ||||
Sbjct: 9319 ttgtgaagtgcaaaaccagcaacct 9343



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 410  accttgaggaaagcatgaagagcaaaagcagt 441
            |||||||||||||||||||| ||| |||||||
Sbjct: 9432 accttgaggaaagcatgaagggcacaagcagt 9463
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>emb|CT010524.6| Mouse DNA sequence from clone RP23-341L7 on chromosome 16, complete
              sequence
          Length = 233599

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 409    caccttgaggaaagcatgaagag 431
              |||||||||||||||||||||||
Sbjct: 145039 caccttgaggaaagcatgaagag 145061
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>emb|AL590103.12| Human DNA sequence from clone RP11-132G19 on chromosome 1 Contains a
             novel gene, the 3' end of the HSPG2 gene for  heparan
             sulfate proteoglycan 2 (perlecan), the 5' end of the
             USP31 gene for ubiquitin specific protease 31 and a CpG
             island, complete sequence
          Length = 175162

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 256   aattttgtcatccagataatt 276
             |||||||||||||||||||||
Sbjct: 22203 aattttgtcatccagataatt 22183
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>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence
          Length = 154728

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 290    atagcttctggctgaactttc 310
              |||||||||||||||||||||
Sbjct: 150899 atagcttctggctgaactttc 150919
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>ref|XM_479149.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1025

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 412 cttgaggaaagcatgaagagcaaa 435
           ||||||||||| ||||||||||||
Sbjct: 632 cttgaggaaagaatgaagagcaaa 655
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>ref|XM_507390.1| PREDICTED Oryza sativa (japonica cultivar-group), P0616D06.113 mRNA
          Length = 1040

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 412 cttgaggaaagcatgaagagcaaa 435
           ||||||||||| ||||||||||||
Sbjct: 625 cttgaggaaagaatgaagagcaaa 648
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>ref|XM_506462.2| PREDICTED Oryza sativa (japonica cultivar-group), P0616D06.113 mRNA
          Length = 1610

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 412 cttgaggaaagcatgaagagcaaa 435
           ||||||||||| ||||||||||||
Sbjct: 643 cttgaggaaagaatgaagagcaaa 666
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>gb|AC073325.9| Homo sapiens BAC clone RP11-351I12 from 7, complete sequence
          Length = 168872

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    ccctcagacaaaatagatgc 155
              ||||||||||||||||||||
Sbjct: 114448 ccctcagacaaaatagatgc 114467
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>gb|AC145090.1| Pan troglodytes BAC clone RP43-2G11 from 7, complete sequence
          Length = 173759

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   ccctcagacaaaatagatgc 155
             ||||||||||||||||||||
Sbjct: 53767 ccctcagacaaaatagatgc 53786
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>gb|AC144431.11| Medicago truncatula clone mth2-21i14, complete sequence
          Length = 154482

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   aagtggcacctctattctaa 68
            ||||||||||||||||||||
Sbjct: 2609 aagtggcacctctattctaa 2628
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>emb|AL122000.11|HSJ572F19 Human DNA sequence from clone RP4-572F19 on chromosome 1p22.3-31.3
             Contains STSs and GSSs, complete sequence
          Length = 120444

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    tttactgaacatgttaatct 88
             ||||||||||||||||||||
Sbjct: 36573 tttactgaacatgttaatct 36554
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>gb|AC108699.3| Homo sapiens 3q BAC RP11-13I12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 151580

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   aattttgtcatccagataat 275
             ||||||||||||||||||||
Sbjct: 39230 aattttgtcatccagataat 39249
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>emb|Y07661.1|HSUSF2 H.sapiens USF2 gene
          Length = 14440

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  catgcagtttctccctcaga 143
            ||||||||||||||||||||
Sbjct: 6173 catgcagtttctccctcaga 6154
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>gb|AC092663.2| Homo sapiens BAC clone RP11-517B1 from 4, complete sequence
          Length = 110158

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   aattttgtcatccagataat 275
             ||||||||||||||||||||
Sbjct: 50187 aattttgtcatccagataat 50168
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>gb|AC092336.2| Homo sapiens chromosome 5 clone RP11-1C1, complete sequence
          Length = 147674

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   accttgaggaaagcatgaag 429
             ||||||||||||||||||||
Sbjct: 96203 accttgaggaaagcatgaag 96184
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>gb|AD000684.1|CH19R30879 Homo sapiens DNA from chromosome 19-cosmid R30879 containing USF2,
             genomic sequence
          Length = 41936

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   catgcagtttctccctcaga 143
             ||||||||||||||||||||
Sbjct: 20553 catgcagtttctccctcaga 20534
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 412      cttgaggaaagcatgaagagcaaa 435
                ||||||||||| ||||||||||||
Sbjct: 25237548 cttgaggaaagaatgaagagcaaa 25237525
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>gb|AC012496.10| Homo sapiens BAC clone RP11-341N18 from 2, complete sequence
          Length = 122770

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   aattttgtcatccagataat 275
             ||||||||||||||||||||
Sbjct: 10877 aattttgtcatccagataat 10858
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>gb|AC005036.1| Homo sapiens BAC clone RP11-364H22 from 2, complete sequence
          Length = 199684

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   aattttgtcatccagataat 275
             ||||||||||||||||||||
Sbjct: 35993 aattttgtcatccagataat 35974
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>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0616D06
          Length = 153800

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 412   cttgaggaaagcatgaagagcaaa 435
             ||||||||||| ||||||||||||
Sbjct: 54219 cttgaggaaagaatgaagagcaaa 54196
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>dbj|AK102448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093O06, full
           insert sequence
          Length = 1609

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 412 cttgaggaaagcatgaagagcaaa 435
           ||||||||||| ||||||||||||
Sbjct: 643 cttgaggaaagaatgaagagcaaa 666
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>dbj|AK069145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007E07, full
           insert sequence
          Length = 1025

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 412 cttgaggaaagcatgaagagcaaa 435
           ||||||||||| ||||||||||||
Sbjct: 632 cttgaggaaagaatgaagagcaaa 655
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>dbj|AK058885.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C05, full
           insert sequence
          Length = 1040

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 412 cttgaggaaagcatgaagagcaaa 435
           ||||||||||| ||||||||||||
Sbjct: 625 cttgaggaaagaatgaagagcaaa 648
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>gb|AC005924.2|AC005924 Homo sapiens Chr.14 PAC RPCI4-794B2 (Roswell Park Cancer Institute Human
              PAC Library) complete sequence
          Length = 111107

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    ccagctgatagctccaagcc 176
              ||||||||||||||||||||
Sbjct: 101701 ccagctgatagctccaagcc 101720
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>emb|AL132838.4|CNS01DTQ Human chromosome 14 DNA sequence BAC R-85G20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175326

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   ccagctgatagctccaagcc 176
             ||||||||||||||||||||
Sbjct: 49883 ccagctgatagctccaagcc 49902
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>emb|CR955007.2| Medicago truncatula chromosome 5 clone mte1-58b20, COMPLETE SEQUENCE
          Length = 108616

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aagtggcacctctattctaa 68
             ||||||||||||||||||||
Sbjct: 92539 aagtggcacctctattctaa 92558



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aagtggcacctctattctaa 68
             ||||||||||||||||||||
Sbjct: 73343 aagtggcacctctattctaa 73362
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>gb|AC150390.2| Branchiostoma floridae clone CH302-115N8, complete sequence
          Length = 230518

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   tccagataaattttgtcatc 267
             ||||||||||||||||||||
Sbjct: 68196 tccagataaattttgtcatc 68215
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>emb|AL844210.7| Mouse DNA sequence from clone RP23-235I13 on chromosome X, complete
            sequence
          Length = 140246

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  atccagataattttgtagat 284
            ||||||||||||||||||||
Sbjct: 4626 atccagataattttgtagat 4645
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>dbj|AB032062.1| Oryza sativa (japonica cultivar-group) OsPAA2 mRNA for alpha 1-2
           subunit of 20S proteasome, complete cds
          Length = 1004

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 412 cttgaggaaagcatgaagagcaaa 435
           ||||||||||| ||||||||||||
Sbjct: 595 cttgaggaaagaatgaagagcaaa 618


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,662,517
Number of Sequences: 3902068
Number of extensions: 4662517
Number of successful extensions: 83950
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83844
Number of HSP's gapped (non-prelim): 106
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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