ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_471939.1| Oryza sativa (japonica cultivar-group), predic... 143 9e-31
2emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4,... 143 9e-31
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
4dbj|AK060427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 9e-31
5gb|AY107582.1| Zea mays PCO101470 mRNA sequence 105 2e-19
6gb|BT018618.1| Zea mays clone EL01N0501G06.d mRNA sequence 103 8e-19
7ref|XM_465609.1| Oryza sativa (japonica cultivar-group), mRNA 101 3e-18
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
9dbj|AP004870.3| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
10dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
11dbj|AK068629.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 3e-18
12gb|AY109170.1| Zea mays PCO119966 mRNA sequence 96 2e-16
13gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 46 0.15
14emb|CR855277.16| Zebrafish DNA sequence from clone DKEY-71B5 in ... 46 0.15
15emb|AL928629.6| Mouse DNA sequence from clone RP23-117F22 on chr... 46 0.15
16emb|AL009028.1|HS164L12 Human DNA sequence from clone RP1-164L12... 44 0.61
17emb|AL670230.12| Mouse DNA sequence from clone RP23-15D12 on chr... 44 0.61
18gb|AC140026.11| Medicago truncatula clone mth2-36j24, complete s... 42 2.4
19emb|AL357973.10| Human DNA sequence from clone RP4-675H14 on chr... 42 2.4
20gb|AC008667.10| Homo sapiens chromosome 5 clone CTB-35F21, compl... 42 2.4
21gb|AC013737.5| Homo sapiens chromosome 10 clone RP11-313B15, com... 42 2.4
22ref|NM_069657.1| Caenorhabditis elegans F36H1.3 (F36H1.3) mRNA, ... 42 2.4
23ref|NM_060806.3| Caenorhabditis elegans T26E3.4 (T26E3.4) mRNA, ... 42 2.4
24gb|AC023794.37| Homo sapiens 12 BAC RP11-834C11 (Roswell Park Ca... 42 2.4
25gb|AF119155.1|HS2NRG05 Homo sapiens alternatively spliced neureg... 42 2.4
26emb|Z68760.2|CEF36H1 Caenorhabditis elegans Cosmid F36H1, comple... 42 2.4
27emb|Z82053.1|CET26E3 Caenorhabditis elegans Cosmid T26E3, comple... 42 2.4
28ref|XM_638728.1| Dictyostelium discoideum PI3kinase (DDB0185203)... 40 9.5
29gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, com... 40 9.5
30gb|AC163655.3| Mus musculus BAC clone RP23-264P21 from chromosom... 40 9.5
31gb|AC102874.7| Mus musculus chromosome 1, clone RP24-500O1, comp... 40 9.5
32gb|AC145984.3| Pan troglodytes BAC clone RP43-17F10 from 7, comp... 40 9.5
33emb|CR847538.15| Zebrafish DNA sequence from clone DKEY-191C17 i... 40 9.5
34emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14... 40 9.5
35gb|AC123840.4| Mus musculus BAC clone RP23-399K5 from chromosome... 40 9.5
36gb|AC124503.2| Mus musculus BAC clone RP23-417F2 from chromosome... 40 9.5
37ref|XM_736982.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 9.5
38gb|AC146154.3| Pan troglodytes BAC clone RP43-37E8 from 7, compl... 40 9.5
39emb|AL390732.10| Human DNA sequence from clone RP11-439N12 on ch... 40 9.5
40emb|AL133549.11| Human DNA sequence from clone RP11-32F11 on chr... 40 9.5
41emb|CR450848.13| Zebrafish DNA sequence from clone CH211-149E23 ... 40 9.5
42gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 40 9.5
43gb|AC023449.11| Homo sapiens chromosome 15, clone RP11-345J18, c... 40 9.5
44ref|XM_683650.1| PREDICTED: Danio rerio similar to CG32425-PA, i... 40 9.5
45gb|AF317810.1|AF317810 Anopheles pseudopunctipennis glucose-6-ph... 40 9.5
46emb|BX255965.12| Zebrafish DNA sequence from clone CH211-270C19,... 40 9.5
47gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175... 40 9.5
48gb|AC010287.9| Homo sapiens chromosome 16 clone CTA-331F8, compl... 40 9.5
49gb|AC109512.12| Homo sapiens chromosome 15, clone RP11-931B1, co... 40 9.5
50gb|AC012183.9| Homo sapiens chromosome 16 clone RP11-451N19, com... 40 9.5
51gb|AC023469.6| Homo sapiens BAC clone RP11-501P16 from 2, comple... 40 9.5
52emb|AL928863.14| Zebrafish DNA sequence from clone CH211-152B13,... 40 9.5
53emb|BX005163.13| Mouse DNA sequence from clone RP23-408E16 on ch... 40 9.5
54gb|AC141427.5| Mus musculus BAC clone RP23-100O21 from chromosom... 40 9.5
55emb|AL732472.16| Mouse DNA sequence from clone RP23-41P22 on chr... 40 9.5
56gb|AC156016.2| Mus musculus BAC clone RP24-320A12 from chromosom... 40 9.5
57gb|U23478.1|DDU23478 Dictyostelium discoideum phosphatidylinosit... 40 9.5
58emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chro... 40 9.5
59emb|AL844160.4| Mouse DNA sequence from clone RP23-340N6 on chro... 40 9.5 
>ref|XM_471939.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 807

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                       
Query: 564 tccaatttctctttctcaatttcaacttttctttcctcggcatgctgagcaacgccatta 623
           ||||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||| 
Sbjct: 788 tccaacttctctttctcaatttcaacttttctttcctcggcatgttgagctaagccattc 729

                                                                       
Query: 624 gccagtgcctggtagtgaaaatccagtgtctgcataaggttctggaacctggctgggtcc 683
           || |||||||||||| | ||||| || |||||||| ||| |||||||||||||||| || 
Sbjct: 728 gcgagtgcctggtagcggaaatctagagtctgcatcaggctctggaacctggctggatca 669

                   
Query: 684 gatgcttg 691
           ||||||||
Sbjct: 668 gatgcttg 661
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>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08,
             complete sequence
          Length = 130521

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                         
Query: 564   tccaatttctctttctcaatttcaacttttctttcctcggcatgctgagcaacgccatta 623
             ||||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||| 
Sbjct: 79687 tccaacttctctttctcaatttcaacttttctttcctcggcatgttgagctaagccattc 79628

                                                                         
Query: 624   gccagtgcctggtagtgaaaatccagtgtctgcataaggttctggaacctggctgggtcc 683
             || |||||||||||| | ||||| || |||||||| ||| |||||||||||||||| || 
Sbjct: 79627 gcgagtgcctggtagcggaaatctagagtctgcatcaggctctggaacctggctggatca 79568

                     
Query: 684   gatgcttg 691
             ||||||||
Sbjct: 79567 gatgcttg 79560



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 143   tcgtattggtaatccaccaataaccgcccaatcatatacactctaca 189
             |||||||| ||||||||||| ||  ||||||||||||||||||||||
Sbjct: 80082 tcgtattgataatccaccaacaattgcccaatcatatacactctaca 80036
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                            
Query: 564      tccaatttctctttctcaatttcaacttttctttcctcggcatgctgagcaacgccatta 623
                ||||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||| 
Sbjct: 15893122 tccaacttctctttctcaatttcaacttttctttcctcggcatgttgagctaagccattc 15893063

                                                                            
Query: 624      gccagtgcctggtagtgaaaatccagtgtctgcataaggttctggaacctggctgggtcc 683
                || |||||||||||| | ||||| || |||||||| ||| |||||||||||||||| || 
Sbjct: 15893062 gcgagtgcctggtagcggaaatctagagtctgcatcaggctctggaacctggctggatca 15893003

                        
Query: 684      gatgcttg 691
                ||||||||
Sbjct: 15893002 gatgcttg 15892995



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                               
Query: 143      tcgtattggtaatccaccaataaccgcccaatcatatacactctaca 189
                |||||||| ||||||||||| ||  ||||||||||||||||||||||
Sbjct: 15893517 tcgtattgataatccaccaacaattgcccaatcatatacactctaca 15893471
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>dbj|AK060427.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-A01, full
           insert sequence
          Length = 500

 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                       
Query: 564 tccaatttctctttctcaatttcaacttttctttcctcggcatgctgagcaacgccatta 623
           ||||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||| 
Sbjct: 171 tccaacttctctttctcaatttcaacttttctttcctcggcatgttgagctaagccattc 112

                                                                       
Query: 624 gccagtgcctggtagtgaaaatccagtgtctgcataaggttctggaacctggctgggtcc 683
           || |||||||||||| | ||||| || |||||||| ||| |||||||||||||||| || 
Sbjct: 111 gcgagtgcctggtagcggaaatctagagtctgcatcaggctctggaacctggctggatca 52

                   
Query: 684 gatgcttg 691
           ||||||||
Sbjct: 51  gatgcttg 44
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>gb|AY107582.1| Zea mays PCO101470 mRNA sequence
          Length = 543

 Score =  105 bits (53), Expect = 2e-19
 Identities = 113/133 (84%)
 Strand = Plus / Minus

                                                                       
Query: 545 tcactgtgcatttgatttctccaatttctctttctcaatttcaacttttctttcctcggc 604
           ||||||||||||||  |||||  |||||||| |||||||||||| |||||||| ||||||
Sbjct: 138 tcactgtgcatttgccttctcagatttctctctctcaatttcaatttttctttgctcggc 79

                                                                       
Query: 605 atgctgagcaacgccattagccagtgcctggtagtgaaaatccagtgtctgcataaggtt 664
           ||| ||  | | |||| |||| || ||||| ||  | ||||||| |||||||||||||||
Sbjct: 78  atgttgtcctatgccactagcaagcgcctgataacggaaatccaatgtctgcataaggtt 19

                        
Query: 665 ctggaacctggct 677
           |||||||||||||
Sbjct: 18  ctggaacctggct 6
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>gb|BT018618.1| Zea mays clone EL01N0501G06.d mRNA sequence
          Length = 1573

 Score =  103 bits (52), Expect = 8e-19
 Identities = 112/132 (84%)
 Strand = Plus / Minus

                                                                        
Query: 545  tcactgtgcatttgatttctccaatttctctttctcaatttcaacttttctttcctcggc 604
            ||||||||||||||  |||||  |||||||| |||||||||||| |||||||| ||||||
Sbjct: 1092 tcactgtgcatttgccttctcagatttctctctctcaatttcaatttttctttgctcggc 1033

                                                                        
Query: 605  atgctgagcaacgccattagccagtgcctggtagtgaaaatccagtgtctgcataaggtt 664
            ||| ||  | | |||| |||| || ||||| ||  | ||||||| |||||||||||||||
Sbjct: 1032 atgttgtcctatgccactagcaagcgcctgataacggaaatccaatgtctgcataaggtt 973

                        
Query: 665  ctggaacctggc 676
            ||||||||||||
Sbjct: 972  ctggaacctggc 961
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>ref|XM_465609.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2534

 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                        
Query: 544  atcactgtgcatttgatttctccaatttctctttctcaatttcaacttttctttcctcgg 603
            |||| |||||||||| ||||||||| |||||||||||||| |||||| |||||||||| |
Sbjct: 2030 atcattgtgcatttgctttctccaacttctctttctcaatctcaactcttctttcctcag 1971

                                                                        
Query: 604  catgctgagcaacgccattagccagtgcctggtagtgaaaatccagtgtctgcataaggt 663
            |||| ||||| | |||| |||| || ||||| ||  ||||||| || || ||||| ||| 
Sbjct: 1970 catgttgagctatgccactagcaagggcctgataacgaaaatcaagagtttgcatgaggc 1911

                       
Query: 664  tctggaacctg 674
            |||||||||||
Sbjct: 1910 tctggaacctg 1900
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                            
Query: 544      atcactgtgcatttgatttctccaatttctctttctcaatttcaacttttctttcctcgg 603
                |||| |||||||||| ||||||||| |||||||||||||| |||||| |||||||||| |
Sbjct: 16315256 atcattgtgcatttgctttctccaacttctctttctcaatctcaactcttctttcctcag 16315197

                                                                            
Query: 604      catgctgagcaacgccattagccagtgcctggtagtgaaaatccagtgtctgcataaggt 663
                |||| ||||| | |||| |||| || ||||| ||  ||||||| || || ||||| ||| 
Sbjct: 16315196 catgttgagctatgccactagcaagggcctgataacgaaaatcaagagtttgcatgaggc 16315137

                           
Query: 664      tctggaacctg 674
                |||||||||||
Sbjct: 16315136 tctggaacctg 16315126
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>dbj|AP004870.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           PAC clone:P0419C03
          Length = 146929

 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                       
Query: 544 atcactgtgcatttgatttctccaatttctctttctcaatttcaacttttctttcctcgg 603
           |||| |||||||||| ||||||||| |||||||||||||| |||||| |||||||||| |
Sbjct: 922 atcattgtgcatttgctttctccaacttctctttctcaatctcaactcttctttcctcag 863

                                                                       
Query: 604 catgctgagcaacgccattagccagtgcctggtagtgaaaatccagtgtctgcataaggt 663
           |||| ||||| | |||| |||| || ||||| ||  ||||||| || || ||||| ||| 
Sbjct: 862 catgttgagctatgccactagcaagggcctgataacgaaaatcaagagtttgcatgaggc 803

                      
Query: 664 tctggaacctg 674
           |||||||||||
Sbjct: 802 tctggaacctg 792
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>dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0487H05
          Length = 176057

 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                          
Query: 544    atcactgtgcatttgatttctccaatttctctttctcaatttcaacttttctttcctcgg 603
              |||| |||||||||| ||||||||| |||||||||||||| |||||| |||||||||| |
Sbjct: 149743 atcattgtgcatttgctttctccaacttctctttctcaatctcaactcttctttcctcag 149684

                                                                          
Query: 604    catgctgagcaacgccattagccagtgcctggtagtgaaaatccagtgtctgcataaggt 663
              |||| ||||| | |||| |||| || ||||| ||  ||||||| || || ||||| ||| 
Sbjct: 149683 catgttgagctatgccactagcaagggcctgataacgaaaatcaagagtttgcatgaggc 149624

                         
Query: 664    tctggaacctg 674
              |||||||||||
Sbjct: 149623 tctggaacctg 149613
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>dbj|AK068629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153G19, full
            insert sequence
          Length = 2531

 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                        
Query: 544  atcactgtgcatttgatttctccaatttctctttctcaatttcaacttttctttcctcgg 603
            |||| |||||||||| ||||||||| |||||||||||||| |||||| |||||||||| |
Sbjct: 2027 atcattgtgcatttgctttctccaacttctctttctcaatctcaactcttctttcctcag 1968

                                                                        
Query: 604  catgctgagcaacgccattagccagtgcctggtagtgaaaatccagtgtctgcataaggt 663
            |||| ||||| | |||| |||| || ||||| ||  ||||||| || || ||||| ||| 
Sbjct: 1967 catgttgagctatgccactagcaagggcctgataacgaaaatcaagagtttgcatgaggc 1908

                       
Query: 664  tctggaacctg 674
            |||||||||||
Sbjct: 1907 tctggaacctg 1897
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>gb|AY109170.1| Zea mays PCO119966 mRNA sequence
          Length = 615

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 111/132 (84%)
 Strand = Plus / Minus

                                                                       
Query: 545 tcactgtgcatttgatttctccaatttctctttctcaatttcaacttttctttcctcggc 604
           ||||||||||||||  |||||  ||||||| ||||||||||||  |||||||| ||||||
Sbjct: 375 tcactgtgcatttgccttctcagatttctccttctcaatttcattttttctttgctcggc 316

                                                                       
Query: 605 atgctgagcaacgccattagccagtgcctggtagtgaaaatccagtgtctgcataaggtt 664
           ||| || |||| |||| |||| || || || ||   |||||||| ||| |||||||||||
Sbjct: 315 atgttgtgcaatgccactagcaagcgcttgataagaaaaatccaatgtatgcataaggtt 256

                       
Query: 665 ctggaacctggc 676
           ||||||||||||
Sbjct: 255 ctggaacctggc 244
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>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 567    aatttctctttctcaatttcaac 589
              |||||||||||||||||||||||
Sbjct: 929909 aatttctctttctcaatttcaac 929931
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>emb|CR855277.16| Zebrafish DNA sequence from clone DKEY-71B5 in linkage group 16, complete
              sequence
          Length = 245559

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 538    tcattcatcactgtgcatttgat 560
              |||||||||||||||||||||||
Sbjct: 236401 tcattcatcactgtgcatttgat 236423
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>emb|AL928629.6| Mouse DNA sequence from clone RP23-117F22 on chromosome X, complete
             sequence
          Length = 105692

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 573   tctttctcaatttcaacttttct 595
             |||||||||||||||||||||||
Sbjct: 84252 tctttctcaatttcaacttttct 84274
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>emb|AL009028.1|HS164L12 Human DNA sequence from clone RP1-164L12 on chromosome Xq13.1-21.2
             Contains the 5' end of the ITM2A gene for integral
             membrane protein 2A, complete sequence
          Length = 135090

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 569   tttctctttctcaatttcaacttttctttc 598
             ||||| ||||||||||||||||||| ||||
Sbjct: 32751 tttctttttctcaatttcaacttttatttc 32722
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>emb|AL670230.12| Mouse DNA sequence from clone RP23-15D12 on chromosome X, complete
              sequence
          Length = 207966

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 202    agctataagagaacttggggac 223
              ||||||||||||||||||||||
Sbjct: 110822 agctataagagaacttggggac 110843
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>gb|AC140026.11| Medicago truncatula clone mth2-36j24, complete sequence
          Length = 162172

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 564  tccaatttctctttctcaatt 584
            |||||||||||||||||||||
Sbjct: 6765 tccaatttctctttctcaatt 6745
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>emb|AL357973.10| Human DNA sequence from clone RP4-675H14 on chromosome 1, complete
             sequence
          Length = 106846

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 548   ctgtgcatttgatttctccaa 568
             |||||||||||||||||||||
Sbjct: 40322 ctgtgcatttgatttctccaa 40302
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>gb|AC008667.10| Homo sapiens chromosome 5 clone CTB-35F21, complete sequence
          Length = 189049

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                           
Query: 537    ctcattcatcactgtgca-tttgatttct 564
              |||||||||||||||||| ||||||||||
Sbjct: 159682 ctcattcatcactgtgcactttgatttct 159654
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>gb|AC013737.5| Homo sapiens chromosome 10 clone RP11-313B15, complete sequence
          Length = 203259

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 562    tctccaatttctctttctcaa 582
              |||||||||||||||||||||
Sbjct: 180725 tctccaatttctctttctcaa 180705
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>ref|NM_069657.1| Caenorhabditis elegans F36H1.3 (F36H1.3) mRNA, complete cds
          Length = 1794

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 573  tctttctcaatttcaactttt 593
            |||||||||||||||||||||
Sbjct: 1442 tctttctcaatttcaactttt 1422
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>ref|NM_060806.3| Caenorhabditis elegans T26E3.4 (T26E3.4) mRNA, complete cds
          Length = 894

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 569 tttctctttctcaatttcaactttt 593
           |||||||||||||||||| ||||||
Sbjct: 416 tttctctttctcaatttcgactttt 392
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>gb|AC023794.37| Homo sapiens 12 BAC RP11-834C11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 198488

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 234   caaagggctcatttaacaaat 254
             |||||||||||||||||||||
Sbjct: 98002 caaagggctcatttaacaaat 97982
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>gb|AF119155.1|HS2NRG05 Homo sapiens alternatively spliced neuregulin 2 (NRG2) gene, exon 5
          Length = 326

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                        
Query: 537 ctcattcatcactgtgca-tttgatttct 564
           |||||||||||||||||| ||||||||||
Sbjct: 21  ctcattcatcactgtgcactttgatttct 49
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>emb|Z68760.2|CEF36H1 Caenorhabditis elegans Cosmid F36H1, complete sequence
          Length = 38608

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 573   tctttctcaatttcaactttt 593
             |||||||||||||||||||||
Sbjct: 28860 tctttctcaatttcaactttt 28840
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>emb|Z82053.1|CET26E3 Caenorhabditis elegans Cosmid T26E3, complete sequence
          Length = 32242

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 569   tttctctttctcaatttcaactttt 593
             |||||||||||||||||| ||||||
Sbjct: 11062 tttctctttctcaatttcgactttt 11038
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>ref|XM_638728.1| Dictyostelium discoideum PI3kinase (DDB0185203), partial mRNA
          Length = 5094

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 561  ttctccaatttctctttctc 580
            ||||||||||||||||||||
Sbjct: 1577 ttctccaatttctctttctc 1558
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>gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, complete sequence
          Length = 154199

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 581    aatttcaacttttctttcct 600
              ||||||||||||||||||||
Sbjct: 136871 aatttcaacttttctttcct 136852
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>gb|AC163655.3| Mus musculus BAC clone RP23-264P21 from chromosome 6, complete sequence
          Length = 185583

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 569   tttctctttctcaatttcaacttt 592
             |||||||||||||||||| |||||
Sbjct: 91669 tttctctttctcaatttccacttt 91692
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>gb|AC102874.7| Mus musculus chromosome 1, clone RP24-500O1, complete sequence
          Length = 166507

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 581  aatttcaacttttctttcct 600
            ||||||||||||||||||||
Sbjct: 5716 aatttcaacttttctttcct 5697
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>gb|AC145984.3| Pan troglodytes BAC clone RP43-17F10 from 7, complete sequence
          Length = 186825

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 516    acaaacaaaccattgctata 535
              ||||||||||||||||||||
Sbjct: 175466 acaaacaaaccattgctata 175485
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>emb|CR847538.15| Zebrafish DNA sequence from clone DKEY-191C17 in linkage group 8,
             complete sequence
          Length = 63430

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 519   aacaaaccattgctataact 538
             ||||||||||||||||||||
Sbjct: 24783 aacaaaccattgctataact 24764
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>emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14 on chromosome 3,
             complete sequence
          Length = 96467

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   actctggcctgcaacaaaac 510
             ||||||||||||||||||||
Sbjct: 68133 actctggcctgcaacaaaac 68114
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>gb|AC123840.4| Mus musculus BAC clone RP23-399K5 from chromosome 13, complete sequence
          Length = 191185

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   aagacaaacaaaccattgct 532
             ||||||||||||||||||||
Sbjct: 55086 aagacaaacaaaccattgct 55105
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>gb|AC124503.2| Mus musculus BAC clone RP23-417F2 from chromosome 10, complete sequence
          Length = 206343

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 569    tttctctttctcaatttcaa 588
              ||||||||||||||||||||
Sbjct: 131423 tttctctttctcaatttcaa 131442
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>ref|XM_736982.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000082.05.0)
           partial mRNA
          Length = 2361

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 574 ctttctcaatttcaacttttcttt 597
           |||||||| |||||||||||||||
Sbjct: 694 ctttctcattttcaacttttcttt 671
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>gb|AC146154.3| Pan troglodytes BAC clone RP43-37E8 from 7, complete sequence
          Length = 240699

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 516    acaaacaaaccattgctata 535
              ||||||||||||||||||||
Sbjct: 100068 acaaacaaaccattgctata 100049
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>emb|AL390732.10| Human DNA sequence from clone RP11-439N12 on chromosome 9 Contains a
              novel gene similar to mouse 9130404H11Rik protein, the CER1
              gene for cerberus 1 homolog, cysteine knot superfamily
              (Xenopus laevis) and the 3' end of a novel gene (FLJ25416),
              complete sequence
          Length = 143246

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    catcataacaagtgtgtagt 315
              ||||||||||||||||||||
Sbjct: 101867 catcataacaagtgtgtagt 101848
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>emb|AL133549.11| Human DNA sequence from clone RP11-32F11 on chromosome 9p24.1-24.3
             Contains the 3'end of the RFX3 gene for regulatory factor
             X 3 (influences HLA class II expression), a novel gene and
             a CpG island, complete sequence
          Length = 162237

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 569   tttctctttctcaatttcaa 588
             ||||||||||||||||||||
Sbjct: 83049 tttctctttctcaatttcaa 83030
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>emb|CR450848.13| Zebrafish DNA sequence from clone CH211-149E23 in linkage group 15,
             complete sequence
          Length = 191457

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   aactcattcatcactgtgca 554
             ||||||||||||||||||||
Sbjct: 79030 aactcattcatcactgtgca 79011
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>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 576    ttctcaatttcaacttttct 595
              ||||||||||||||||||||
Sbjct: 495414 ttctcaatttcaacttttct 495433
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>gb|AC023449.11| Homo sapiens chromosome 15, clone RP11-345J18, complete sequence
          Length = 175336

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 501    gcaacaaaactcaagacaaa 520
              ||||||||||||||||||||
Sbjct: 101713 gcaacaaaactcaagacaaa 101732
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>ref|XM_683650.1| PREDICTED: Danio rerio similar to CG32425-PA, isoform A (LOC560255),
            mRNA
          Length = 6279

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 535  aactcattcatcactgtgca 554
            ||||||||||||||||||||
Sbjct: 3313 aactcattcatcactgtgca 3332
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>gb|AF317810.1|AF317810 Anopheles pseudopunctipennis glucose-6-phosphate dehydrogenase
           (G6pd) gene, partial cds
          Length = 501

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 569 tttctctttctcaatttcaacttt 592
           ||||||||| ||||||||||||||
Sbjct: 161 tttctctttttcaatttcaacttt 184
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>emb|BX255965.12| Zebrafish DNA sequence from clone CH211-270C19, complete sequence
          Length = 148298

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 95    atggattcactgaatcctgcaacg 118
             |||| |||||||||||||||||||
Sbjct: 51228 atggcttcactgaatcctgcaacg 51205
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>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4,
              complete sequence
          Length = 413138

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 561    ttctccaatttctctttctc 580
              ||||||||||||||||||||
Sbjct: 135611 ttctccaatttctctttctc 135630
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>gb|AC010287.9| Homo sapiens chromosome 16 clone CTA-331F8, complete sequence
          Length = 198949

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 570    ttctctttctcaatttcaac 589
              ||||||||||||||||||||
Sbjct: 192048 ttctctttctcaatttcaac 192029
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>gb|AC109512.12| Homo sapiens chromosome 15, clone RP11-931B1, complete sequence
          Length = 189975

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 501    gcaacaaaactcaagacaaa 520
              ||||||||||||||||||||
Sbjct: 178090 gcaacaaaactcaagacaaa 178109
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>gb|AC012183.9| Homo sapiens chromosome 16 clone RP11-451N19, complete sequence
          Length = 220173

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 570    ttctctttctcaatttcaac 589
              ||||||||||||||||||||
Sbjct: 144733 ttctctttctcaatttcaac 144752
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>gb|AC023469.6| Homo sapiens BAC clone RP11-501P16 from 2, complete sequence
          Length = 133922

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 502   caacaaaactcaagacaaacaaac 525
             ||||||||||||||||||| ||||
Sbjct: 90285 caacaaaactcaagacaaaaaaac 90308
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>emb|AL928863.14| Zebrafish DNA sequence from clone CH211-152B13, complete sequence
          Length = 142564

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 535    aactcattcatcactgtgca 554
              ||||||||||||||||||||
Sbjct: 112354 aactcattcatcactgtgca 112373
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>emb|BX005163.13| Mouse DNA sequence from clone RP23-408E16 on chromosome X, complete
              sequence
          Length = 188605

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 554    atttgatttctccaatttct 573
              ||||||||||||||||||||
Sbjct: 180784 atttgatttctccaatttct 180803
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>gb|AC141427.5| Mus musculus BAC clone RP23-100O21 from chromosome 6, complete sequence
          Length = 187833

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 569    tttctctttctcaatttcaacttt 592
              |||||||||||||||||| |||||
Sbjct: 185369 tttctctttctcaatttccacttt 185346
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>emb|AL732472.16| Mouse DNA sequence from clone RP23-41P22 on chromosome 2, complete
            sequence
          Length = 129369

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 419  gcctcaggcctccaaaaacaagta 442
            |||||||||||||||| |||||||
Sbjct: 3472 gcctcaggcctccaaatacaagta 3495
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>gb|AC156016.2| Mus musculus BAC clone RP24-320A12 from chromosome 14, complete
             sequence
          Length = 154465

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   gcaccacccataaacaaata 351
             ||||||||||||||||||||
Sbjct: 96052 gcaccacccataaacaaata 96033
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>gb|U23478.1|DDU23478 Dictyostelium discoideum phosphatidylinositol-4,5-diphosphate
            3-kinase (PIK3) mRNA, partial cds
          Length = 4758

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 561  ttctccaatttctctttctc 580
            ||||||||||||||||||||
Sbjct: 1241 ttctccaatttctctttctc 1222
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>emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chromosome 2, complete
              sequence
          Length = 188624

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 503    aacaaaactcaagacaaacaaacc 526
              |||||||||||||| |||||||||
Sbjct: 183231 aacaaaactcaagaaaaacaaacc 183208
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>emb|AL844160.4| Mouse DNA sequence from clone RP23-340N6 on chromosome 4, complete
             sequence
          Length = 207022

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 575   tttctcaatttcaacttttctttc 598
             |||||||||||||| |||||||||
Sbjct: 83605 tttctcaatttcaatttttctttc 83582


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,750,008
Number of Sequences: 3902068
Number of extensions: 6750008
Number of successful extensions: 164112
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 163879
Number of HSP's gapped (non-prelim): 232
length of query: 694
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 671
effective length of database: 17,143,297,704
effective search space: 11503152759384
effective search space used: 11503152759384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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