Clone Information

BLAST Search Result

Clone Name	rbags39g03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL5A_ORYSA (P49625) 60S ribosomal protein L5-1	235	7e-62
2	RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2	234	1e-61
3	RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5	206	4e-53
4	RL5_ARATH (P49227) 60S ribosomal protein L5	196	3e-50
5	RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)	162	7e-40
6	RL5_BOMMO (O76190) 60S ribosomal protein L5	129	9e-30
7	RL5_STYCL (Q26481) 60S ribosomal protein L5	125	1e-28
8	RL5_HELAN (O65353) 60S ribosomal protein L5	124	3e-28
9	RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)	122	6e-28
10	RL5_CAEEL (P49405) 60S ribosomal protein L5	121	1e-27
11	RL5B_XENLA (P15126) 60S ribosomal protein L5-B	120	4e-27
12	RL5A_XENLA (P15125) 60S ribosomal protein L5-A	119	7e-27
13	RL5B_SCHPO (O74306) 60S ribosomal protein L5-B	119	9e-27
14	RL5_MACFA (Q4R5M0) 60S ribosomal protein L5	119	9e-27
15	RL5_HUMAN (P46777) 60S ribosomal protein L5	119	9e-27
16	RL5_RAT (P09895) 60S ribosomal protein L5	118	1e-26
17	RL5_MOUSE (P47962) 60S ribosomal protein L5	118	1e-26
18	RL5_CHICK (P22451) 60S ribosomal protein L5	118	2e-26
19	RL5_DUNSA (O22608) 60S ribosomal protein L5	117	2e-26
20	RL5A_SCHPO (P52822) 60S ribosomal protein L5-A	117	3e-26
21	RL5_ANOGA (O44248) 60S ribosomal protein L5	108	1e-23
22	RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosoma...	108	1e-23
23	RL18_METKA (Q8TZA5) 50S ribosomal protein L18P	47	6e-05
24	RL18_METJA (P54044) 50S ribosomal protein L18P	44	3e-04
25	RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P	44	4e-04
26	RL18_METMP (Q6LXD4) 50S ribosomal protein L18P	43	6e-04
27	RL18_AERPE (Q9YF94) 50S ribosomal protein L18P	42	0.001
28	RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P	42	0.002
29	RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P	41	0.003
30	RL18_SULTO (Q975J9) 50S ribosomal protein L18P	41	0.003
31	RL18_PYRHO (O59438) 50S ribosomal protein L18P	40	0.007
32	RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)	40	0.007
33	RL18_METVA (P14033) 50S ribosomal protein L18P	36	0.076
34	ZN674_HUMAN (Q2M3X9) Zinc finger protein 674	33	0.49
35	RL18_METTH (O26130) 50S ribosomal protein L18P	33	0.84
36	RL18_SULAC (O05640) 50S ribosomal protein L18P	32	1.9
37	SRYD_DROME (P07664) Serendipity locus protein delta	31	2.4
38	UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstrea...	30	4.2
39	NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (At...	30	5.4
40	SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subun...	30	5.4
41	CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (S...	30	5.4
42	RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)	30	7.1
43	VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein ...	30	7.1
44	ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (E...	30	7.1
45	UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstrea...	29	9.3
46	PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase ...	29	9.3
47	NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated prote...	29	9.3
48	CTR3_RAT (O08812) Cationic amino acid transporter 3 (CAT-3) (Sol...	29	9.3
49	ZN622_CHICK (Q90Y35) Zinc finger protein 622 (Zn-finger protein ...	29	9.3
50	RL18_ARCFU (O28373) 50S ribosomal protein L18P	29	9.3
51	GIDA_BORGA (Q662I6) tRNA uridine 5-carboxymethylaminomethyl modi...	29	9.3

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score =  235 bits (600), Expect = 7e-62
 Identities = 116/145 (80%), Positives = 126/145 (86%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           LIRTTTGNRVF           DIPHSDKRFAGFKKDEK LD++IHRKYIYGGHVADYMR
Sbjct: 150 LIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMR 209

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
           S+A+EEPEK+Q HFSEY+KKGI AD MEA+YKKVHAAIRADP+MAKSTK  P THKRYN 
Sbjct: 210 SMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNL 269

Query: 244 KKLTYEERKASLVERLNALNNSAGA 170
           KKLTYE+RKASLVERLNALN+SAGA
Sbjct: 270 KKLTYEQRKASLVERLNALNSSAGA 294

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>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score =  234 bits (597), Expect = 1e-61
 Identities = 115/145 (79%), Positives = 126/145 (86%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           LIRTTTGNRVF           DIPHSDKRFAGFKKDEK LD++IHRKYIYGGHVADYMR
Sbjct: 150 LIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMR 209

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
           S+A+EEPEK+Q HFSEY+KKGI AD ME++YKKVHAAIRADP+MAKSTK  P THKRYN 
Sbjct: 210 SMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNL 269

Query: 244 KKLTYEERKASLVERLNALNNSAGA 170
           KKLTYE+RKASLVERLNALN+SAGA
Sbjct: 270 KKLTYEQRKASLVERLNALNSSAGA 294

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>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score =  206 bits (524), Expect = 4e-53
 Identities = 100/143 (69%), Positives = 116/143 (81%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           LIRTTTGNRVF           DIPHSDKRFAG+ K+ + LD E+HRKYI+GGHVA YMR
Sbjct: 149 LIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMR 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
           +L ++EPEKYQ+HFSEYIKKGI AD++E +YKKVHAAIRA+P   KS KP PK HKRYN 
Sbjct: 209 TLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNL 268

Query: 244 KKLTYEERKASLVERLNALNNSA 176
           KKLTY+ERKA LVERLNALN++A
Sbjct: 269 KKLTYDERKARLVERLNALNSAA 291

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>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score =  196 bits (499), Expect = 3e-50
 Identities = 95/144 (65%), Positives = 111/144 (77%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           LIRTTTGNRVF           DIPHSDKRFAGF K+ K LDAEIHR YIYGGHV++YM+
Sbjct: 149 LIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMK 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            L ++EPEK QTHFS YIKKG+ A+ +E +YKKVHAAIRA+P+  K+ K APK HKRYN 
Sbjct: 209 LLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNL 268

Query: 244 KKLTYEERKASLVERLNALNNSAG 173
           KKLTYEERK  L+ER+ ALN + G
Sbjct: 269 KKLTYEERKNKLIERVKALNGAGG 292

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>RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)|
          Length = 121

 Score =  162 bits (410), Expect = 7e-40
 Identities = 77/109 (70%), Positives = 88/109 (80%)
 Frame = -3

Query: 499 KDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVH 320
           KD K LDAE+HRKYIYGGHVA YM  L ++EPEKYQ+HFS YIK  ++ D++E +YKKVH
Sbjct: 3   KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVH 62

Query: 319 AAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAG 173
           AAIR DPS  KS K  PKTHKRYN KKLTYEERKA L+ERLNALN + G
Sbjct: 63  AAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAAGG 111

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>RL5_BOMMO (O76190) 60S ribosomal protein L5|
          Length = 299

 Score =  129 bits (323), Expect = 9e-30
 Identities = 68/146 (46%), Positives = 91/146 (62%), Gaps = 8/146 (5%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTG RVF           ++PHS KRF G+  + K  +AE+HR +I+G HVA+YMR
Sbjct: 150 LARTTTGRRVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 209

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPS-MAKSTKPAPKTHKRYN 248
           SL  ++ + ++  FS+YIK G++AD +EA+YKK H AIRADPS   K  K      KR+N
Sbjct: 210 SLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWN 269

Query: 247 PKKLTYEER-------KASLVERLNA 191
            +KLT  ER       KAS ++RL A
Sbjct: 270 KRKLTLAERKNRIKQKKASFIKRLQA 295

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>RL5_STYCL (Q26481) 60S ribosomal protein L5|
          Length = 294

 Score =  125 bits (314), Expect = 1e-28
 Identities = 61/129 (47%), Positives = 85/129 (65%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTG +VF           DIPHS KRF G+  +     AE+HR +I+GGHV++YM+
Sbjct: 149 LARTTTGAKVFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMK 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            L +E+ E ++  FS+YIK G++AD +E +Y K HAAIR DP+  K T  A KT KR+N 
Sbjct: 209 ELEEEDEEAFKRQFSQYIKHGVTADTVEEMYTKAHAAIREDPTPKKKTDFAGKT-KRWNR 267

Query: 244 KKLTYEERK 218
           KK+T+ +R+
Sbjct: 268 KKMTFSQRR 276

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>RL5_HELAN (O65353) 60S ribosomal protein L5|
          Length = 297

 Score =  124 bits (310), Expect = 3e-28
 Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L+RTTTG RVF           +I HS KRF GF  + K  +A++HR++I+G HVA+YMR
Sbjct: 150 LMRTTTGARVFGAMKGAVDGGLNILHSTKRFPGFDSESKEFNADVHRQHIFGQHVAEYMR 209

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA-PKTHKRYN 248
            LA+E+ E Y+  FS+YIK G++AD +E +YKK H AIRA+P+     K A PK  KR+ 
Sbjct: 210 QLAEEDDEAYKRQFSQYIKLGLNADAIEGLYKKAHEAIRANPARKTVAKKAHPK--KRWT 267

Query: 247 PKKLTYEERKASL 209
            KKLT E+R+  +
Sbjct: 268 EKKLTREQRQGKV 280

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>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score =  122 bits (307), Expect = 6e-28
 Identities = 64/149 (42%), Positives = 90/149 (60%), Gaps = 8/149 (5%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RT+TG RVF            IPHS+ RF G+  + + LDAE  +KYI+GGHVA+YM 
Sbjct: 153 LARTSTGARVFGAMKGASDGGIFIPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYME 212

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHK---- 257
           +LAD++ E+Y++ F+ YI+  + AD +E +Y + HAAIR DP   K+   APK  K    
Sbjct: 213 TLADDDEERYKSQFNRYIEDDLEADGLEDLYAEAHAAIREDP-FKKAESEAPKKTKEEWK 271

Query: 256 ----RYNPKKLTYEERKASLVERLNALNN 182
               +Y   KLT E+R A + ER+ AL +
Sbjct: 272 AESLKYKKSKLTREQRAAGVQERIAALRS 300

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>RL5_CAEEL (P49405) 60S ribosomal protein L5|
          Length = 293

 Score =  121 bits (304), Expect = 1e-27
 Identities = 59/135 (43%), Positives = 88/135 (65%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTG+++F           ++PHS+ RF GF ++ K  +AE HR  I G HVADYM 
Sbjct: 149 LARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMT 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            L +E+ ++Y+  FS+++  G++AD++ A Y+KVH+AIRAD S A   K A K  KR+  
Sbjct: 209 YLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPA--AKKAAKPSKRHTA 266

Query: 244 KKLTYEERKASLVER 200
           K+LTY+ERK  + ++
Sbjct: 267 KRLTYDERKQRVADK 281

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>RL5B_XENLA (P15126) 60S ribosomal protein L5-B|
          Length = 295

 Score =  120 bits (300), Expect = 4e-27
 Identities = 57/135 (42%), Positives = 84/135 (62%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTGN+VF            IPHS KRF G+  + K  + E+HRK+I+  ++A+YMR
Sbjct: 149 LTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNIAEYMR 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            L +E+ + Y+  FS+YIK G++AD +E +YKK HA IR +P   K  K   K  KR+N 
Sbjct: 209 LLMEEDEDAYKKQFSQYIKNGVAADQLEDIYKKAHAGIRENPVHEKKPKKEVK-KKRWNR 267

Query: 244 KKLTYEERKASLVER 200
            KL+ E++K  + ++
Sbjct: 268 AKLSLEQKKDRVAQK 282

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>RL5A_XENLA (P15125) 60S ribosomal protein L5-A|
          Length = 295

 Score =  119 bits (298), Expect = 7e-27
 Identities = 58/135 (42%), Positives = 84/135 (62%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTGN+VF            IPHS KRF G+  + K  + E+HRK+I+  +VA+YMR
Sbjct: 149 LTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNVAEYMR 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            L +E+ + Y+  FS+YIK G++AD +E +YKK HA IR +P   K  K   K  KR+N 
Sbjct: 209 LLMEEDEDAYKKQFSQYIKNGVTADQVEDLYKKAHAGIRENPVHEKKPKKEVK-KKRWNR 267

Query: 244 KKLTYEERKASLVER 200
            KL+ E++K  + ++
Sbjct: 268 AKLSLEQKKDRVAQK 282

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>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B|
          Length = 294

 Score =  119 bits (297), Expect = 9e-27
 Identities = 69/149 (46%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RT+TG+RVF            IPHS  RF GF  + + LD E  RKYIYGGHVA+YM 
Sbjct: 150 LKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYME 209

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA---PKTHKR 254
            L D++ E+YQ  FS  I  GI +D +E +Y + +A IR DPS  KS K A        +
Sbjct: 210 MLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLK 269

Query: 253 YNPKKLTYEERKASLVERLNALNNSAGAA 167
           Y  +KLT EERK    ER NA    AG A
Sbjct: 270 YTQRKLTAEERK----ERFNAKVIEAGRA 294

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>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5|
          Length = 296

 Score =  119 bits (297), Expect = 9e-27
 Identities = 59/135 (43%), Positives = 83/135 (61%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTGN+VF            IPHS KRF G+  + K  +AE+HRK+I G +VADYMR
Sbjct: 149 LARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            L +E+ + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   K  KR+N 
Sbjct: 209 YLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNR 267

Query: 244 KKLTYEERKASLVER 200
            K++  ++K  + ++
Sbjct: 268 PKMSLAQKKDRVAQK 282

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>RL5_HUMAN (P46777) 60S ribosomal protein L5|
          Length = 296

 Score =  119 bits (297), Expect = 9e-27
 Identities = 59/135 (43%), Positives = 83/135 (61%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTGN+VF            IPHS KRF G+  + K  +AE+HRK+I G +VADYMR
Sbjct: 149 LARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            L +E+ + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   K  KR+N 
Sbjct: 209 YLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNR 267

Query: 244 KKLTYEERKASLVER 200
            K++  ++K  + ++
Sbjct: 268 PKMSLAQKKDRVAQK 282

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>RL5_RAT (P09895) 60S ribosomal protein L5|
          Length = 296

 Score =  118 bits (296), Expect = 1e-26
 Identities = 59/135 (43%), Positives = 83/135 (61%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTGN+VF            IPHS KRF G+  + K  +AE+HRK+I G +VADYMR
Sbjct: 149 LARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            L +E+ + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   K  KR+N 
Sbjct: 209 YLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNR 267

Query: 244 KKLTYEERKASLVER 200
            K++  ++K  + ++
Sbjct: 268 PKMSLAQKKDRVAQK 282

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>RL5_MOUSE (P47962) 60S ribosomal protein L5|
          Length = 296

 Score =  118 bits (296), Expect = 1e-26
 Identities = 59/135 (43%), Positives = 83/135 (61%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTGN+VF            IPHS KRF G+  + K  +AE+HRK+I G +VADYMR
Sbjct: 149 LARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            L +E+ + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   K  KR+N 
Sbjct: 209 YLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNR 267

Query: 244 KKLTYEERKASLVER 200
            K++  ++K  + ++
Sbjct: 268 PKMSLAQKKDRVAQK 282

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>RL5_CHICK (P22451) 60S ribosomal protein L5|
          Length = 296

 Score =  118 bits (295), Expect = 2e-26
 Identities = 60/135 (44%), Positives = 82/135 (60%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTGN+VF            IPHS KRF G+  + K  +AE+HRK+I G +VADYMR
Sbjct: 149 LARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            L +E+ + Y+  FS+YIK  I+ D ME +YKK HAAIR +P   K  K   K  KR N 
Sbjct: 209 YLMEEDEDAYKKQFSQYIKNNITPDGMEEMYKKAHAAIRDNPVHEKKPKREVK-KKRVNS 267

Query: 244 KKLTYEERKASLVER 200
            K++  ++K  + ++
Sbjct: 268 TKMSLAQKKDRVAQK 282

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>RL5_DUNSA (O22608) 60S ribosomal protein L5|
          Length = 271

 Score =  117 bits (294), Expect = 2e-26
 Identities = 56/121 (46%), Positives = 79/121 (65%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RT+TG++VF           DIPH++KRF G+   +K LD E+ +KYIYGGHVA+Y  
Sbjct: 150 LKRTSTGSKVFAAMKGALDGGLDIPHNEKRFVGYA--DKKLDTEVLQKYIYGGHVAEYQE 207

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
           ++ +EEPEKYQ HFS Y++  I  D +E +YK+VHA IR +P   K  +  P   KR++P
Sbjct: 208 TMQEEEPEKYQAHFSSYVENEIEPDGIEDMYKEVHAKIRENPCPPKKERTKPADAKRWSP 267

Query: 244 K 242
           +
Sbjct: 268 Q 268

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>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A|
          Length = 294

 Score =  117 bits (292), Expect = 3e-26
 Identities = 68/149 (45%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RT+TG+RVF            IPHS  RF GF  + + LD E  RKYIYGGHVA+YM 
Sbjct: 150 LKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYME 209

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA---PKTHKR 254
            L D++ E+YQ  FS  I  GI +D +E +Y + +A IR DPS  KS K A        +
Sbjct: 210 MLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLK 269

Query: 253 YNPKKLTYEERKASLVERLNALNNSAGAA 167
           +  +KLT EERK    ER NA    AG A
Sbjct: 270 HTQRKLTAEERK----ERFNAKVIEAGRA 294

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>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score =  108 bits (270), Expect = 1e-23
 Identities = 54/119 (45%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTG+RVF           +IPHS KRF G+  + KS +AE+HR +I+G HVA+YMR
Sbjct: 150 LARTTTGSRVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMR 209

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIR-ADPSMAKSTKPAPKTHKRY 251
           +L +E+ E ++  FS+YI  GI ADD+E +YK  HA+IR   PS     + +P++  R+
Sbjct: 210 TLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRW 268

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>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S|
           RNA-binding protein)
          Length = 296

 Score =  108 bits (270), Expect = 1e-23
 Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L RTTTG RVF            +PHS+ RF G+  + + +D E+ R YI+GGHV+ YM 
Sbjct: 149 LQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYME 208

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTH----- 260
            LAD++ E++   F  Y+   I AD +E +Y   H AIRADP+   + K   K       
Sbjct: 209 ELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAES 268

Query: 259 KRYNPKKLTYEERKASLVERLNAL 188
           K+Y   KL+ EER A +  ++ AL
Sbjct: 269 KKYRQTKLSKEERAARVAAKIAAL 292

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>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 28/101 (27%), Positives = 50/101 (49%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L R   G+RVF           DIPH           E+ L  E     I G H+A+  R
Sbjct: 111 LHRPVRGSRVFAMLKGALDAGMDIPHG----------EEVLPPEDR---IRGEHIANLAR 157

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRAD 302
            + +E+PE+Y+  FS+Y+++G+  +++   +++V + I  +
Sbjct: 158 QIKEEDPEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEE 198

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>RL18_METJA (P54044) 50S ribosomal protein L18P|
          Length = 195

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 26/98 (26%), Positives = 47/98 (47%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L R T GN +F           +IPH           E+ L +E   + I G H+  Y  
Sbjct: 107 LHRATKGNAIFAILKGALDAGMEIPHG----------EEILPSE---ERIRGEHIKAYAE 153

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 311
            L +++ E+Y+  FS+Y++KG+  + +   ++++ A I
Sbjct: 154 MLKEQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191

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>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P|
          Length = 205

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 28/98 (28%), Positives = 42/98 (42%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L R   G RVF            IPH ++       DE           I G HVA+Y  
Sbjct: 107 LHRPAPGARVFAVLKGALDAGLKIPHGEEVLP----DEDR---------IKGKHVAEYAE 153

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 311
            L +E PE Y+  FS Y+++G+  + +   +++V   I
Sbjct: 154 KLKEENPEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191

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>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P|
          Length = 193

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 29/87 (33%), Positives = 43/87 (49%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L R T G  +F           DIPH DK  A    DE+ L+         G HV +Y  
Sbjct: 107 LHRATKGAAIFAVLKGALDAGMDIPHGDKIIA----DEERLN---------GTHVKNYAE 153

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDM 344
           SL  E+ + Y+  FS+Y++KG++ +D+
Sbjct: 154 SLK-EDADAYKKQFSKYLEKGLNPEDL 179

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>RL18_AERPE (Q9YF94) 50S ribosomal protein L18P|
          Length = 214

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 26/98 (26%), Positives = 46/98 (46%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L +   G+RVF           +IPHS++   G   DE+          +   H+A +  
Sbjct: 108 LHKPVKGSRVFAALKGALDAGVEIPHSEEILPG---DER----------VRCEHIAQWAE 154

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 311
           +L +E  E YQ  FS Y+ +G++ +++    ++V  AI
Sbjct: 155 ALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAI 192

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>RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P|
          Length = 203

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 25/92 (27%), Positives = 44/92 (47%)
 Frame = -3

Query: 586 GNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 407
           G+ VF           ++PHS + F            E +R  I G H+A+Y R L +++
Sbjct: 114 GSSVFAVLKGAVDAGLNVPHSPEIFP-----------EDYR--IRGEHIAEYARMLKEQD 160

Query: 406 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 311
            EK++  F  Y++KG+  + +   + +V A I
Sbjct: 161 EEKFRRQFGGYLEKGLDPEKLPEHFDEVKARI 192

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>RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P|
          Length = 201

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 24/94 (25%), Positives = 46/94 (48%)
 Frame = -3

Query: 592 TTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLAD 413
           T G+ +F           ++PHS++ +            E +R  I G H+A+Y ++L +
Sbjct: 112 TRGSSIFAVLKGAVDAGLNVPHSEEIYP-----------EDYR--INGEHIANYAKALKE 158

Query: 412 EEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 311
           E+   Y+  FS Y+ KG+  + +   +++V A I
Sbjct: 159 EDEALYRKQFSGYLVKGLEPEKLPEHFEEVKAKI 192

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>RL18_SULTO (Q975J9) 50S ribosomal protein L18P|
          Length = 196

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = -3

Query: 586 GNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 407
           G+R+F            IP  D    G K+D            I G H+A Y + L  E 
Sbjct: 114 GSRIFTAIKGAIDAGLSIPVGD---LGIKEDR-----------IKGVHIASYAQKLEAEN 159

Query: 406 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRA 305
           PE ++  FS+Y+++G+   D+ + ++++   I++
Sbjct: 160 PELFKRLFSKYLERGLHPKDLPSHFEEILNKIKS 193

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>RL18_PYRHO (O59438) 50S ribosomal protein L18P|
          Length = 203

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 22/92 (23%), Positives = 45/92 (48%)
 Frame = -3

Query: 586 GNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 407
           G+ +F           ++PHS + F            E +R  I G H+A+Y R L +++
Sbjct: 114 GSSIFAVLKGAIDAGLNVPHSPEIFP-----------EDYR--IRGEHIAEYARMLKEQD 160

Query: 406 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 311
            ++++  F  Y++KG+  + +   +++V A I
Sbjct: 161 EDRFRRQFGGYLEKGLDPEKLPEHFEEVKARI 192

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>RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)|
          Length = 203

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 24/92 (26%), Positives = 43/92 (46%)
 Frame = -3

Query: 586 GNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 407
           G+ VF           ++PHS + F     DE           I G H+A+Y + L +++
Sbjct: 114 GSSVFAVLKGAVDAGLNVPHSPEIFP----DEYR---------IRGEHIAEYAKMLKEQD 160

Query: 406 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 311
            EK++  F  Y+ KG+  + +   +++V A I
Sbjct: 161 EEKFRRQFGGYLVKGLDPEKLPEHFEEVKARI 192

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>RL18_METVA (P14033) 50S ribosomal protein L18P|
          Length = 195

 Score = 36.2 bits (82), Expect = 0.076
 Identities = 26/98 (26%), Positives = 46/98 (46%)
 Frame = -3

Query: 604 LIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMR 425
           L R T G  +F           DIP  ++  A    DE+ L+         G H+  Y  
Sbjct: 109 LHRATKGAAIFAVLKGALDAGMDIPCGEEIIA----DEERLN---------GTHIKQYAE 155

Query: 424 SLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 311
            L ++E E Y+  FS+Y++KG++ +D+   ++++   I
Sbjct: 156 LLKEDE-EAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 192

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>ZN674_HUMAN (Q2M3X9) Zinc finger protein 674|
          Length = 581

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -3

Query: 394 QTHFSEYIKKGISADDMEAVYKKVHAAIR---ADPSMAKSTKPAPKTHKRYNPKKLTYE 227
           +TH  +   KGI       +Y+++H + +   ++   A   KP+P  H R + K+  YE
Sbjct: 328 KTHIRQAFYKGIKCTTSSLIYQRIHTSEKPQCSEHGKASDEKPSPTKHWRTHTKENIYE 386

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>RL18_METTH (O26130) 50S ribosomal protein L18P|
          Length = 192

 Score = 32.7 bits (73), Expect = 0.84
 Identities = 23/92 (25%), Positives = 40/92 (43%)
 Frame = -3

Query: 586 GNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 407
           G++VF           ++PH +        DE           I G H+ +Y  SL +EE
Sbjct: 113 GSKVFAALKGAVDAGLNVPHGESVLP----DESR---------IRGEHIMEYAESLDEEE 159

Query: 406 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 311
             K    FS+Y+++G+S  D+   + ++   I
Sbjct: 160 LRK---RFSKYLERGLSPVDLPEHFDEIKKRI 188

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>RL18_SULAC (O05640) 50S ribosomal protein L18P|
          Length = 197

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 457 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 359
           + G H++ Y + L +E  E Y   FS YI++G+
Sbjct: 143 VNGSHISAYAQKLKNENQELYNKLFSSYIQRGL 175

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>SRYD_DROME (P07664) Serendipity locus protein delta|
          Length = 433

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = -3

Query: 526 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 347
           +D  F    KD++  D EI R+++             DEE E+      E+I + +   D
Sbjct: 126 ADALFVELVKDQEESDTEIKREFV-------------DEEEEEDDDDDDEFICEDVDVGD 172

Query: 346 MEAVYKK 326
            EA+Y K
Sbjct: 173 SEALYGK 179

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>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding|
           factor 1-A) (UBF-1-A) (xUBF-1)
          Length = 677

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -3

Query: 436 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPK 266
           DY + LA+++   Y+T F  ++ KG+S+ D  A YK+ ++  R   S AK   P  K
Sbjct: 531 DYYKKLAEDQQRVYRTQFDTWM-KGLSSQD-RAAYKEQNSNKR--KSTAKIQVPVAK 583

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>NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (AtNAP1)|
           (AtNAP125) (p125Nap1) (NAP of plants) (ARP2/3 regulatory
           protein subunit NAPP) (Protein GNARLED)
          Length = 1425

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +2

Query: 323 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLL 502
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SID+  V L    ++ L 
Sbjct: 302 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDIALVVLKENLVVTLF 359

Query: 503 ETSKSL 520
               SL
Sbjct: 360 RDEVSL 365

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>SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subunit|
           (Epithelial Na+ channel beta subunit) (Beta ENaC)
           (Nonvoltage-gated sodium channel 1 beta subunit) (SCNEB)
           (Beta NaCH)
          Length = 638

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 385 SEFGTSRVPHLLATSCSQQHALHRCTCGESQHP 483
           S++ T+        SC Q H +H C+CG   +P
Sbjct: 373 SDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYP 405

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>CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 618

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 386 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 526
           +S  L G ++   PHV++  P    LA+ L +  LLVL  +  +LVT
Sbjct: 144 ISRTLKGTILLKMPHVLAEYPDFFALALVLLLTGLLVLGASKSALVT 190

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>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)|
          Length = 101

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -3

Query: 376 YIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 200
           Y +K +   D        HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 30  YARKRLVIQDKNKYNTPAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 87

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>VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein VTA1|
           (VPS20-associated protein 1)
          Length = 330

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 25/84 (29%), Positives = 40/84 (47%)
 Frame = -3

Query: 418 ADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKK 239
           AD   E+ QT   +  +  I+ D+ + V K+V     + PS     +PA   HK Y   +
Sbjct: 231 ADSVNEEEQT--VDKNEDAITKDEQQVVKKEVDLTRPSAPS-----EPAAAEHKSYTKDE 283

Query: 238 LTYEERKASLVERLNALNNSAGAA 167
           LT    +AS +E++  L   A +A
Sbjct: 284 LTKIMDRASKIEQIQKLAKYAISA 307

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>ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 928

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
 Frame = -3

Query: 529 HSDKRFAGFKKDEKSLDAEIHRKYIYGG-------HVADYMRSLADEEPEKYQTHFSEYI 371
           H D  F G     +SL       Y  GG       +   +  + AD    +Y T F++ I
Sbjct: 350 HGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRASRYSTEFAKII 409

Query: 370 KKGI---SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRY 251
              I   + DD+EAV K  + A+       K        +++Y
Sbjct: 410 AAPILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKY 452

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>UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstream binding|
           factor 1-B) (UBF-1-B) (xUBF-2)
          Length = 701

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -3

Query: 436 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKT 263
           DY + LA+++   Y+T F  ++ KG+S  D  A YK+ +   R   S  K   P+ K+
Sbjct: 553 DYYKKLAEDQQRLYRTQFDTWM-KGLSTQD-RAAYKEQNTNKR--KSTTKIQAPSSKS 606

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>PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase N2 precursor|
           (EC 3.1.3.48) (R-PTP-N2) (PTP IA-2beta) (Protein
           tyrosine phosphatase-NP) (PTP-NP)
          Length = 1001

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 245 QEAHLRGEEGQPRREAQRPQQL 180
           QE+H RG EGQPR +   P+ +
Sbjct: 340 QESHGRGAEGQPREQTDAPETM 361

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>NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated protein 1)|
           (P125Nap1) (NAP of plants)
          Length = 1359

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 25/94 (26%), Positives = 40/94 (42%)
 Frame = +2

Query: 323 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLL 502
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SIDV  V L    +L L 
Sbjct: 291 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDVAMVVLKENLVLSLF 348

Query: 503 ETSKSLVTVGNVQTTVQSSLKCTKHTVSSRSPDK 604
                L+        +   L+  +   S R+  K
Sbjct: 349 RDEYILLHENYQLYVLPKVLESKRMAKSGRTKQK 382

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>CTR3_RAT (O08812) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 619

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 386 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 526
           +S  L G ++   PHV++  P    LA+ L +  LLVL      LVT
Sbjct: 144 ISQTLKGTILLNMPHVLAEYPDFFALALVLLLTGLLVLGANESGLVT 190

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>ZN622_CHICK (Q90Y35) Zinc finger protein 622 (Zn-finger protein C47)|
          Length = 405

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = -3

Query: 520 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD--D 347
           KRF+ F   E  L ++ H          +  +       +K +    + ++KG++ +  D
Sbjct: 74  KRFSTFNAYENHLKSKKH---------LELEKKAVQAVSKKVKILNEKNLEKGLAVESVD 124

Query: 346 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 245
            + +   +  AIRA PS +    P P +H   +P
Sbjct: 125 KDEMNAAIQQAIRAQPSSSPKKVPLPPSHASSSP 158

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>RL18_ARCFU (O28373) 50S ribosomal protein L18P|
          Length = 189

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 23/85 (27%), Positives = 34/85 (40%)
 Frame = -3

Query: 592 TTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLAD 413
           T G+RVF           ++PHSD+      +             I G H+A Y     +
Sbjct: 113 TRGSRVFAVLRGAVEGGLEVPHSDEVLPDDSR-------------IRGEHIAAYY----E 155

Query: 412 EEPEKYQTHFSEYIKKGISADDMEA 338
             PE+    F EY K+G+   D+ A
Sbjct: 156 MNPER----FGEYEKRGLKPSDLPA 176

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>GIDA_BORGA (Q662I6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 621

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
 Frame = -3

Query: 526 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 347
           SDKR      D   +D E + KY++     + ++ L  +     +    E +KK +S D 
Sbjct: 441 SDKRLIKIGYDLGLVDEERYSKYLFKKRRVEEIKELLKQRRLSLKDVADEQLKKHVSKDF 500

Query: 346 MEAVYK---KVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNAL 188
              +      +   I+ DPS++ S     +     + K   Y  R+  L+++LN L
Sbjct: 501 YHILKDPSISLDNLIKIDPSLSDSKVILEQV--ELDVKYEGYINRQKDLIKKLNNL 554


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,812,972
Number of Sequences: 219361
Number of extensions: 1474154
Number of successful extensions: 5175
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 4925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5159
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

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