ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RS17D_ARATH (Q9LZ17) 40S ribosomal protein S17-4 70 9e-13
2RS17C_ARATH (Q9SQZ1) 40S ribosomal protein S17-3 70 1e-12
3RS17_LYCES (P49215) 40S ribosomal protein S17 70 1e-12
4RS17B_ARATH (Q9SJ36) 40S ribosomal protein S17-2 67 8e-12
5RS17A_ARATH (P49205) 40S ribosomal protein S17-1 67 1e-11
6RS17_THEPA (Q4MYY1) 40S ribosomal protein S17 54 9e-08
7RS17_THEAN (Q967G1) 40S ribosomal protein S17 54 9e-08
8RS17A_SCHPO (O42984) 40S ribosomal protein S17-A 50 2e-06
9RS17B_SCHPO (Q9P7J6) 40S ribosomal protein S17-B 49 4e-06
10RS17_SPOFR (Q962R2) 40S ribosomal protein S17 48 7e-06
11RS17_DROME (P17704) 40S ribosomal protein S17 44 1e-04
12RS17_ANOGA (Q9U9L1) 40S ribosomal protein S17 43 2e-04
13RS17_RAT (P04644) 40S ribosomal protein S17 43 2e-04
14RS17_PIG (Q6QAP7) 40S ribosomal protein S17 43 2e-04
15RS17_MOUSE (P63276) 40S ribosomal protein S17 43 2e-04
16RS17_HUMAN (P08708) 40S ribosomal protein S17 43 2e-04
17RS17_FELCA (P63275) 40S ribosomal protein S17 43 2e-04
18RS17_CRIGR (P63274) 40S ribosomal protein S17 43 2e-04
19RS17_COTJA (Q7ZUB2) 40S ribosomal protein S17 43 2e-04
20RS17_CHICK (P08636) 40S ribosomal protein S17 43 2e-04
21RS17_CANFA (P63273) 40S ribosomal protein S17 43 2e-04
22RS17_ICTPU (Q90YQ6) 40S ribosomal protein S17 43 2e-04
23RS17_DICDI (P42520) Probable 40S ribosomal protein S17 40 0.002
24RS17_NEUCR (P27770) 40S ribosomal protein S17 (CRP3) 39 0.002
25RS17B_YEAST (P14127) 40S ribosomal protein S17-B (RP51B) 36 0.020
26RS17A_YEAST (P02407) 40S ribosomal protein S17-A (RP51A) 36 0.020
27RS17_CAEEL (O01692) 40S ribosomal protein S17 36 0.026
28MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1 30 1.4
29MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 ... 30 1.9
30VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (V... 30 1.9
31YR705_MIMIV (Q5UNW3) Hypothetical protein R705 30 1.9
32DPO3X_MYCPN (P75177) DNA polymerase III gamma/tau subunit (EC 2.... 29 2.4
33GUAA_BORPE (Q7VVM4) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 29 2.4
34GUAA_BORPA (Q7WAV6) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 29 2.4
35GUAA_BORBR (Q7WK13) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 29 2.4
36PP220_ASFB7 (Q08358) Polyprotein pp220 (220 kDa polyprotein) [Co... 29 3.2
37SCS2_YEAST (P40075) Vesicle-associated membrane protein-associat... 29 3.2
38RS10_WOLPM (Q73H86) 30S ribosomal protein S10 28 4.1
39YIA1_RHISP (P17983) Insertion element ISR1 hypothetical 11 kDa p... 28 5.4
40IE63_SHV21 (P13199) 52 kDa immediate-early phosphoprotein 28 5.4
41ATG13_ASPFU (Q4WHN5) Autophagy-related protein 13 28 5.4
42HOXT_RALEU (P31913) Protein hoxT 28 7.0
43ALL5_HEVBR (Q39967) Major latex allergen Hev b 5 28 7.0
44EAD_EBV (P03191) Early antigen protein D (EA-D) 28 7.0
45WDR50_HUMAN (Q9Y5J1) WD-repeat protein 50 28 7.0
46GUAA_BURS3 (Q39F73) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 28 7.0
47SURE_AERPE (Q9YDW8) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleosid... 27 9.2
48HAK10_ORYSA (Q67VS5) Potassium transporter 10 (OsHAK10) 27 9.2 
>RS17D_ARATH (Q9LZ17) 40S ribosomal protein S17-4|
          Length = 140

 Score = 70.5 bits (171), Expect = 9e-13
 Identities = 31/43 (72%), Positives = 40/43 (93%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGV 250
           EEERERRMDFVP++SA++ DEI+VDKET++MLA LGM+D PG+
Sbjct: 74  EEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGI 116
to top
>RS17C_ARATH (Q9SQZ1) 40S ribosomal protein S17-3|
          Length = 139

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 32/64 (50%), Positives = 50/64 (78%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVERAPEVTASKKXLPPAV 199
           EEERERRMDFVP++SA+++D+++VDKET++MLA LGM+D+ G+ +      +++ + PAV
Sbjct: 74  EEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQ----VETQQAMAPAV 129

Query: 198 QRTP 187
              P
Sbjct: 130 FGRP 133
to top
>RS17_LYCES (P49215) 40S ribosomal protein S17|
          Length = 143

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVERAPEVTASKKXLP 208
           EEERERRMDFVP++SA++ D I VDKET+DML+ LGM+DLPGV +      +   LP
Sbjct: 74  EEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQAAEPQAVAALP 130
to top
>RS17B_ARATH (Q9SJ36) 40S ribosomal protein S17-2|
          Length = 139

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 30/43 (69%), Positives = 39/43 (90%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGV 250
           EEERERRMDFVP++SA++ DEI+VDKET++MLA LGM+D  G+
Sbjct: 74  EEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGI 116
to top
>RS17A_ARATH (P49205) 40S ribosomal protein S17-1|
          Length = 140

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 30/43 (69%), Positives = 39/43 (90%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGV 250
           EEERERRMDFVP++SA++ DEI+VDKET++MLA LGM+D  G+
Sbjct: 74  EEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTLGI 116
to top
>RS17_THEPA (Q4MYY1) 40S ribosomal protein S17|
          Length = 129

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 27/44 (61%), Positives = 36/44 (81%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERRMD++PEKS LEV  I+VD++T DML FL ++ LP ++
Sbjct: 74  EEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS-LPNLK 116
to top
>RS17_THEAN (Q967G1) 40S ribosomal protein S17|
          Length = 130

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 27/44 (61%), Positives = 36/44 (81%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERRMD++PEKS LEV  I+VD++T DML FL ++ LP ++
Sbjct: 74  EEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS-LPNLK 116
to top
>RS17A_SCHPO (O42984) 40S ribosomal protein S17-A|
          Length = 131

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVERAP 238
           EEERER+  +VPE S LEVD + VD++T DML  LG   +P    AP
Sbjct: 75  EEERERKDQYVPEVSELEVDRVNVDQDTKDMLKSLGYDQIPVRVLAP 121
to top
>RS17B_SCHPO (Q9P7J6) 40S ribosomal protein S17-B|
          Length = 132

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGV 250
           EEERER+  +VPE S LE D+I VD++T DML  LG   +P V
Sbjct: 75  EEERERKDQYVPEVSELEKDKINVDQDTKDMLKALGYDSIPTV 117
to top
>RS17_SPOFR (Q962R2) 40S ribosomal protein S17|
          Length = 132

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 25/50 (50%), Positives = 32/50 (64%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVERAPEVT 229
           EEERERR ++VPE SALE D I VD +T DML  L   ++ G++     T
Sbjct: 74  EEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 123
to top
>RS17_DROME (P17704) 40S ribosomal protein S17|
          Length = 130

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VP  SALE D I VD +T +ML  L   ++ G++
Sbjct: 74  EEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQ 117
to top
>RS17_ANOGA (Q9U9L1) 40S ribosomal protein S17|
          Length = 130

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 22/35 (62%), Positives = 26/35 (74%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFL 274
           EEERERR ++VP+ SALE D I VD ET +ML  L
Sbjct: 74  EEERERRDNYVPDVSALEQDIIEVDPETKEMLKHL 108
to top
>RS17_RAT (P04644) 40S ribosomal protein S17|
          Length = 134

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VPE SAL+ + I VD +T +ML  L    L  ++
Sbjct: 74  EEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQ 117
to top
>RS17_PIG (Q6QAP7) 40S ribosomal protein S17|
          Length = 134

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VPE SAL+ + I VD +T +ML  L    L  ++
Sbjct: 74  EEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQ 117
to top
>RS17_MOUSE (P63276) 40S ribosomal protein S17|
          Length = 134

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VPE SAL+ + I VD +T +ML  L    L  ++
Sbjct: 74  EEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQ 117
to top
>RS17_HUMAN (P08708) 40S ribosomal protein S17|
          Length = 134

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VPE SAL+ + I VD +T +ML  L    L  ++
Sbjct: 74  EEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQ 117
to top
>RS17_FELCA (P63275) 40S ribosomal protein S17|
          Length = 134

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VPE SAL+ + I VD +T +ML  L    L  ++
Sbjct: 74  EEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQ 117
to top
>RS17_CRIGR (P63274) 40S ribosomal protein S17|
          Length = 134

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VPE SAL+ + I VD +T +ML  L    L  ++
Sbjct: 74  EEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQ 117
to top
>RS17_COTJA (Q7ZUB2) 40S ribosomal protein S17|
          Length = 134

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VPE SAL+ + I VD +T +ML  L    L  ++
Sbjct: 74  EEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQ 117
to top
>RS17_CHICK (P08636) 40S ribosomal protein S17|
          Length = 134

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VPE SAL+ + I VD +T +ML  L    L  ++
Sbjct: 74  EEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQ 117
to top
>RS17_CANFA (P63273) 40S ribosomal protein S17|
          Length = 134

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VPE SAL+ + I VD +T +ML  L    L  ++
Sbjct: 74  EEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQ 117
to top
>RS17_ICTPU (Q90YQ6) 40S ribosomal protein S17|
          Length = 133

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVE 247
           EEERERR ++VPE SAL+ + I VD +T +ML  L    L  ++
Sbjct: 74  EEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQ 117
to top
>RS17_DICDI (P42520) Probable 40S ribosomal protein S17|
          Length = 134

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 14/32 (43%), Positives = 28/32 (87%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDML 283
           EEERE+R ++VP++SA++ +E+++D++  +ML
Sbjct: 74  EEEREKRDNYVPQESAIKTNEVKIDRDVEEML 105
to top
>RS17_NEUCR (P27770) 40S ribosomal protein S17 (CRP3)|
          Length = 146

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSAL------EVDEIRVDKETMDMLAFLGMADLP 256
           EEERER+  +VPE SAL      E  ++ VD ET D+L  LG   +P
Sbjct: 75  EEERERKDQYVPEVSALDFTQNSESGQLDVDTETKDLLKHLGFDSIP 121
to top
>RS17B_YEAST (P14127) 40S ribosomal protein S17-B (RP51B)|
          Length = 136

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDE----IRVDKETMDMLAFLGM 268
           EEERER+  +VPE SAL++      + VD +T D++  LG+
Sbjct: 75  EEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGL 115
to top
>RS17A_YEAST (P02407) 40S ribosomal protein S17-A (RP51A)|
          Length = 136

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDE----IRVDKETMDMLAFLGM 268
           EEERER+  +VPE SAL++      + VD +T D++  LG+
Sbjct: 75  EEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGL 115
to top
>RS17_CAEEL (O01692) 40S ribosomal protein S17|
          Length = 130

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSAL---EVDEIRVDKETMDMLAFLGMADLPGV 250
           EEERERR +++PE S +   ++  I+VD +T DML   G  +LP V
Sbjct: 75  EEERERRDNYMPEISTVDPSQLTSIKVDTDTSDMLKAAGF-NLPNV 119
to top
>MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1|
          Length = 2171

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
 Frame = -1

Query: 372  ERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVERAPEVTASKKXLPPAV-- 199
            ER+R    V  +++ E+ E +V K+T+   AF    + P   R  +    ++ +P  +  
Sbjct: 884  ERDRESLKVEIETSEEIQEKQVQKQTLPSKAFEREVERPVANRECDPAELEEKVPKVILE 943

Query: 198  QRTPRWQPRLGS-----PASSPYP 142
            + T R +P  GS      ASSP P
Sbjct: 944  RDTQRGEPEGGSQDQKGQASSPIP 967
to top
>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor|
            with BRCT domains 1)
          Length = 2089

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
 Frame = -1

Query: 372  ERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVERAPEVTASKKXLPPAV-- 199
            ER+R    V  +++ E+ E +V K+T+   AF    + P   R  +    ++ +P  +  
Sbjct: 884  ERDRESLKVEIETSEEIQEKQVQKQTLPSKAFEREVERPVANRECDPAELEEKVPKVILE 943

Query: 198  QRTPRWQPRLGS-----PASSPYP 142
            + T R +P  GS      ASSP P
Sbjct: 944  RDTQRGEPEGGSQDQKGQASSPTP 967
to top
>VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (VTG I) [Contains:|
            Lipovitellin-1 (LV1); Phosvitin (PV); Lipovitellin-2
            (LV2)]
          Length = 1704

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 233  TSGARSTPGRSAMPRNASMSIVSLSTRISSTSRADFSGTKSMRRSRSS 376
            +S + S+  RS+   ++S S    S +I   +R + S + S RRSRSS
Sbjct: 1087 SSSSSSSESRSSRSSSSSSSSSRSSRKIDLAARTNSSSSSSSRRSRSS 1134
to top
>YR705_MIMIV (Q5UNW3) Hypothetical protein R705|
          Length = 313

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 24/75 (32%), Positives = 39/75 (52%)
 Frame = +2

Query: 152 DDAGEPRRGCHRGVRCTAGGRXFLDAVTSGARSTPGRSAMPRNASMSIVSLSTRISSTSR 331
           +D  + RRG     R  +       + +SG+RS+  RS+  R++     S ST   ++SR
Sbjct: 187 EDGEDGRRGRRSNSRRRSSNARSTSSRSSGSRSSGSRSSGSRSSG----SRSTGSKTSSR 242

Query: 332 ADFSGTKSMRRSRSS 376
           +  SG+K+ R S SS
Sbjct: 243 S--SGSKTSRSSGSS 255
to top
>DPO3X_MYCPN (P75177) DNA polymerase III gamma/tau subunit (EC 2.7.7.7)|
          Length = 681

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = -1

Query: 366 ERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVERAPEVTASKKXLPPAVQRTP 187
           E+    V  ++  E+ E+    ET    A     DL G+   PEV   +   P +V+ T 
Sbjct: 421 EQPQTIVQPEAQQEITEVEQPTETSPAPA----TDLFGLAIKPEVVRKRGRRPLSVENTD 476

Query: 186 RWQP---RLGSPASSPYP 142
            +QP   +L  P S P P
Sbjct: 477 FFQPAVKKLIQPVSKPAP 494
to top
>GUAA_BORPE (Q7VVM4) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 530

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 178 LPPRGPLYGWRKXFFGRGDLGSALDAREIGHAEERQHVHRLLVD 309
           +P  G  YG +      G   S  D RE G+AE R H H  L+D
Sbjct: 78  VPVLGICYGMQSMAQQLGGTVSFSDHREFGYAEVRAHGHTKLLD 121
to top
>GUAA_BORPA (Q7WAV6) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 530

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 178 LPPRGPLYGWRKXFFGRGDLGSALDAREIGHAEERQHVHRLLVD 309
           +P  G  YG +      G   S  D RE G+AE R H H  L+D
Sbjct: 78  VPVLGICYGMQSMAQQLGGTVSFSDHREFGYAEVRAHGHTKLLD 121
to top
>GUAA_BORBR (Q7WK13) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 530

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 178 LPPRGPLYGWRKXFFGRGDLGSALDAREIGHAEERQHVHRLLVD 309
           +P  G  YG +      G   S  D RE G+AE R H H  L+D
Sbjct: 78  VPVLGICYGMQSMAQQLGGTVSFSDHREFGYAEVRAHGHTKLLD 121
to top
>PP220_ASFB7 (Q08358) Polyprotein pp220 (220 kDa polyprotein) [Contains: p34; p14;|
            p37; p150]
          Length = 2474

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -1

Query: 342  EKSALEVDEIRV--DKETMDMLAFLGMADLPGVERAPEVTASKKXLPPAVQRTPRWQPRL 169
            EK    V E R   D   M+   +  + D  G  ++ ++  S + + P+ Q TP+W+P L
Sbjct: 1014 EKFQRIVQEARTMNDFGMMNQTNYSILPDEDGYTQSSQLLPSDRFISPSTQPTPKWRPAL 1073
to top
>SCS2_YEAST (P40075) Vesicle-associated membrane protein-associated protein|
           SCS2 (VAMP-associated protein SCS2) (VAP homolog 1)
           (Cholin sensitivity suppressor protein 2)
          Length = 243

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -1

Query: 324 VDEIRVDKETMDMLAFLGMADLPGV-ERAPEVTASKKXLPPAVQRTPRWQPRLGSPASSP 148
           V+ +  D E  ++ A +   ++P   E  P V   K+ +PP VQ+T   +    +  S+P
Sbjct: 145 VEPVVQDSEPKEVPAVVNEKEVPAEPETQPPVQVKKEEVPPVVQKTVPHENEKQTSNSTP 204

Query: 147 YPYHAL 130
            P + +
Sbjct: 205 APQNQI 210
to top
>RS10_WOLPM (Q73H86) 30S ribosomal protein S10|
          Length = 109

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 212 RXFLDAVTSGARSTPGRSAMPRNASMSIVSLSTRISSTSRADFSGTKSMR 361
           R F+D +   +    G  A+PR  S  IV+ S  +   SR  F    S R
Sbjct: 22  RKFIDELKRSSAKLSGPIALPRKDSKFIVNRSPHVDKKSREQFEMRTSRR 71
to top
>YIA1_RHISP (P17983) Insertion element ISR1 hypothetical 11 kDa protein A1|
          Length = 93

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 24/73 (32%), Positives = 31/73 (42%)
 Frame = +1

Query: 145 VRRRCGGT*ARLPPRGPLYGWRKXFFGRGDLGSALDAREIGHAEERQHVHRLLVDADLVD 324
           +RRR   T +  P  GP  G  +  FG   L   L  R  GHA  R+ V R+  D  L  
Sbjct: 12  IRRRARTTRSARPAEGP--GQERRRFGYRRLHVLL--RREGHAVNRKRVQRIYRDEQLTV 67

Query: 325 LKSRLLRDEVHAA 363
            +      + HAA
Sbjct: 68  RRRAPQASDGHAA 80
to top
>IE63_SHV21 (P13199) 52 kDa immediate-early phosphoprotein|
          Length = 417

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 227 RPKXXFRQPYNGPRGGNRA*VPPHRRRTPIMLYKFLLDLL 108
           RP   FR+PY+ PR G     PP   R P +L  F + +L
Sbjct: 120 RPSRPFRKPYSHPRNGPLRNGPP---RAPPLLKLFDISIL 156
to top
>ATG13_ASPFU (Q4WHN5) Autophagy-related protein 13|
          Length = 958

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -1

Query: 246 RAPEVTASKKXLPPAVQRTPRWQPRLGSPASSP 148
           +AP ++AS   + P +  +PR +P + +P+S P
Sbjct: 419 KAPPLSASPSLIDPPLGASPRSRPIVSAPSSEP 451
to top
>HOXT_RALEU (P31913) Protein hoxT|
          Length = 179

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -1

Query: 333 ALEVDEIRVDKETMDMLAFLGMADLPGVERAPEVTA 226
           A EVD +R  +E    +A   MAD+P V RA  V A
Sbjct: 8   ACEVDRVRHLEEAFCCIAATRMADIPVVNRALSVEA 43
to top
>ALL5_HEVBR (Q39967) Major latex allergen Hev b 5|
          Length = 150

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
 Frame = -1

Query: 375 EERERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVERAPEVTASKKX---LPP 205
           EE +      P  S  E  +   +KE          A  P  E+A EV   +K     P 
Sbjct: 24  EETKTEEPAAPPASEQETADATPEKEEPTAAPAEPEAPAPETEKAEEVEKIEKTEEPAPE 83

Query: 204 AVQRTPRWQPRLGSPASSPYPYH 136
           A Q TP  +P    P +   P H
Sbjct: 84  ADQTTPEEKPAEPEPVAEEEPKH 106
to top
>EAD_EBV (P03191) Early antigen protein D (EA-D)|
          Length = 404

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
 Frame = -1

Query: 255 GVERAPEVTASKKXLPPAVQRTPRWQ----PRLGSPA 157
           G+++ P  T S    PP   RTP W+    P   SPA
Sbjct: 323 GLQQRPRHTVSPSPSPPPPPRTPTWESPARPETPSPA 359
to top
>WDR50_HUMAN (Q9Y5J1) WD-repeat protein 50|
          Length = 556

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSALEVDEIRVDKETMDML 283
           E E E + +F P+K  + VDE   D+E +DM+
Sbjct: 125 EVENEAKGNFPPQKKPVWVDEEDEDEEMVDMM 156
to top
>GUAA_BURS3 (Q39F73) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 539

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = +1

Query: 178 LPPRGPLYGWRKXFFGRGDLGSALDAREIGHAEERQHVHRLLVDADLVDLKSRLLRDEVH 357
           +P  G  YG +      G      D RE G+AE R H H  L+D  + D K+    DE H
Sbjct: 75  VPVLGICYGMQTMAVQLGGKVEWSDHREFGYAEMRAHGHTRLLDG-IEDFKT----DEGH 129
to top
>SURE_AERPE (Q9YDW8) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside|
           5'-monophosphate phosphohydrolase)
          Length = 267

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/72 (25%), Positives = 31/72 (43%)
 Frame = -1

Query: 369 RERRMDFVPEKSALEVDEIRVDKETMDMLAFLGMADLPGVERAPEVTASKKXLPPAVQRT 190
           RE   D +PE  ++ +  +    ET+   A L + ++P   R  +VT          +R 
Sbjct: 132 REEETDCLPEALSISLAVVETSVETLSSSAGLMVVNIPRSPRGFKVTR-------PCRRV 184

Query: 189 PRWQPRLGSPAS 154
           PR+   +G   S
Sbjct: 185 PRFSGEIGEEGS 196
to top
>HAK10_ORYSA (Q67VS5) Potassium transporter 10 (OsHAK10)|
          Length = 843

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
 Frame = -1

Query: 378 EEERERRMDFVPEKSA--LEVDEIRVDKETMDMLAFLGMADLPGVER----APEVTASKK 217
           E+E E RM  +P  S   +E D       + D +   G     G  R    A E+ +   
Sbjct: 684 EKEEEERMSVIPSGSIRMMEEDGGAGAPSSEDTVGGSGSGSGRGSSRGGGGAREIMSPSP 743

Query: 216 XLPPAVQRTPRWQPRLGSPASSPYP 142
             PP V   PR + R   PA+SP P
Sbjct: 744 SPPPVVV-APRKRVRFVLPAASPRP 767


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,570,754
Number of Sequences: 219361
Number of extensions: 959367
Number of successful extensions: 3133
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 3012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3122
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top