ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39f19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
2dbj|AK102304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
3gb|AF162682.1|AF162682 Zea mays mutant sh2-7527 alien mRNA sequence 387 e-104
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 246 7e-62
5dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic D... 246 7e-62
6dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic D... 246 7e-62
7ref|NM_190716.1| Oryza sativa (japonica cultivar-group), predic... 242 1e-60
8gb|AY103854.1| Zea mays PCO070219 mRNA sequence 121 3e-24
9gb|AF293457.1|AF293457S1 Zea mays truncated insertion sequence V... 117 4e-23
10gb|AE016830.1| Enterococcus faecalis V583, complete genome 46 0.14
11emb|AL732395.9| Human DNA sequence from clone RP11-77F5 on chrom... 44 0.54
12ref|NM_120696.2| Arabidopsis thaliana unknown protein AT5G06140 ... 42 2.1
13ref|XM_509473.1| PREDICTED: Pan troglodytes similar to CG1842-PA... 42 2.1
14ref|XM_424703.1| PREDICTED: Gallus gallus similar to ankyrin rep... 42 2.1
15ref|XM_425390.1| PREDICTED: Gallus gallus similar to Williams Be... 42 2.1
16gb|AC091091.2| Gallus gallus clone WAG-93J15, complete sequence 42 2.1
17gb|AY080809.1| Arabidopsis thaliana putative sorting nexin prote... 42 2.1
18dbj|AK091526.1| Homo sapiens cDNA FLJ34207 fis, clone FCBBF30201... 42 2.1
19emb|CR407078.1| Gallus gallus finished cDNA, clone ChEST749e9 42 2.1
20dbj|AB095937.2| Homo sapiens mRNA for KIAA2017 protein, partial cds 42 2.1
21gb|AC079315.30| Homo sapiens 12 BAC RP11-380L11 (Roswell Park Ca... 42 2.1
22emb|BX830901.1|CNS0A0TB Arabidopsis thaliana Full-length cDNA Co... 42 2.1
23gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, c... 42 2.1
24dbj|AP002544.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.1
25gb|AC140260.3| Mus musculus BAC clone RP23-311O16 from 6, comple... 42 2.1
26gb|AC102638.13| Mus musculus chromosome 3, clone RP23-406D2, com... 40 8.4
27ref|NM_175354.2| Mus musculus RIKEN cDNA C030016D13 gene (C03001... 40 8.4
28gb|AY702618.1| Bubalus bubalis breed Haikou mitochondrion, compl... 40 8.4
29gb|AY390369.1| Ailurus fulgens from HeFei Zoo 12S ribosomal RNA ... 40 8.4
30gb|AY390368.1| Ailurus fulgens from Wolong 12S ribosomal RNA gen... 40 8.4
31gb|AY390367.1| Ailurus fulgens from Wolong 12S ribosomal RNA gen... 40 8.4
32gb|AC132595.3| Mus musculus BAC clone RP24-229G7 from chromosome... 40 8.4
33gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 8.4
34gb|AY184437.1| Alces alces 12S ribosomal RNA gene, complete sequ... 40 8.4
35gb|AY395840.1| Glossophaga soricina 12S ribosomal RNA gene, part... 40 8.4
36gb|AY326102.1| Peromyscus maniculatus interphotoreceptor retinoi... 40 8.4
37gb|AY121986.1| Giraffa camelopardalis 12S ribosomal RNA gene, co... 40 8.4
38gb|AY495458.1| Nyctinomops femorosaccus 12S ribosomal RNA, tRNA-... 40 8.4
39gb|AY027824.1| Myotis acathoe isolate 149 12S ribosomal RNA gene... 40 8.4
40gb|AY027823.1| Myotis acathoe isolate 158 12S ribosomal RNA gene... 40 8.4
41gb|AC025540.7| Homo sapiens BAC clone RP11-295N22 from 7, comple... 40 8.4
42gb|AC004485.2| Homo sapiens BAC clone CTB-118E13 from 7, complet... 40 8.4
43gb|AC165968.3| Mus musculus BAC clone RP23-181K4 from chromosome... 40 8.4
44gb|AC142353.1| Pan troglodytes BAC clone RP43-21M1 from 7, compl... 40 8.4
45gb|AC124973.8| Mus musculus strain C57BL/6J clone rp23-329l13 ma... 40 8.4
46emb|AL359770.12| Human DNA sequence from clone RP11-286B9 on chr... 40 8.4
47gb|AY227534.1| Protoxerus stangeri isolate Pst1 12S ribosomal RN... 40 8.4
48gb|AY227526.1| Paraxerus alexandri isolate Pax 12S ribosomal RNA... 40 8.4
49gb|AY227525.1| Funisciurus pyrropus isolate Fpy1 12S ribosomal R... 40 8.4
50gb|AF334513.1| Mesoplodon bidens 12S ribosomal RNA gene, partial... 40 8.4
51emb|AL645532.16| Mouse DNA sequence from clone RP23-295E4 on chr... 40 8.4
52emb|AJ554052.1|CMA554052 Caperea marginata complete mitochondria... 40 8.4
53emb|AJ554051.1|BMY554051 Balaena mysticetus complete mitochondri... 40 8.4
54gb|DQ410815.1| Hipposideros galeritus isolate NNP099 12S ribosom... 40 8.4
55gb|DQ410791.1| Hipposideros ridleyi isolate B160 12S ribosomal R... 40 8.4
56gb|AF263232.1| Rhinopoma hardwickei isolate TK40884 12S ribosoma... 40 8.4
57gb|AF263231.1| Rhinopoma hardwickei isolate TK25643 12S ribosoma... 40 8.4
58gb|DQ191517.1| Petromyscus collinus interphotoreceptor retinoid-... 40 8.4
59gb|S80939.1| 12S rRNA [Ailurus fulgens=red pandas, Mitochondrial... 40 8.4
60gb|AF249983.1|AF249983 Raphicerus melanotis 12S ribosomal RNA ge... 40 8.4
61gb|AF249982.1|AF249982 Raphicerus sharpei 12S ribosomal RNA gene... 40 8.4
62gb|U12826.1|AFU12826 Ailurus fulgens mitochondrion 12S rRNA gene... 40 8.4
63gb|AY488491.1| Bubalus bubalis mitochondrion, complete genome 40 8.4
64gb|U87012.1|BDU87012 Bubalus depressicornis 12S ribosomal RNA ge... 40 8.4
65gb|U87011.1|SCU87011 Syncerus caffer 12S ribosomal RNA gene, mit... 40 8.4
66gb|U87008.1|ACU87008 Antilope cervicapra 12S ribosomal RNA gene,... 40 8.4
67gb|U87007.1|GSU87007 Gazella subgutturosa 12S ribosomal RNA gene... 40 8.4
68gb|U87002.1|RCU87002 Raphicerus campestris 12S ribosomal RNA gen... 40 8.4
69gb|U87001.1|KVU87001 Kobus vardoni 12S ribosomal RNA gene, mitoc... 40 8.4
70gb|U87000.1|KKU87000 Kobus kob 12S ribosomal RNA gene, mitochond... 40 8.4
71gb|U86999.1|KLU86999 Kobus leche 12S ribosomal RNA gene, mitocho... 40 8.4
72gb|U86998.1|KMU86998 Kobus megaceros 12S ribosomal RNA gene, mit... 40 8.4
73gb|U86965.1|KEU86965 Kobus ellipsiprymnus 12S ribosomal RNA gene... 40 8.4
74dbj|AK047713.1| Mus musculus adult male corpus striatum cDNA, RI... 40 8.4
75gb|AF231029.1|AF231029 Pseudonovibos spiralis horn tRNA-Phe gene... 40 8.4
76gb|AF231028.1|AF231028 Bubalus bubalus horn tRNA-Phe gene, parti... 40 8.4
77gb|BC094907.1| Mus musculus cDNA clone IMAGE:30021652 40 8.4
78gb|AY012154.1| Manis pentadactyla 12S ribosomal RNA gene, partia... 40 8.4
79gb|AC147298.4| Pan troglodytes BAC clone RP43-58G7 from chromoso... 40 8.4
80dbj|AP006475.1| Caperea marginata mitochondrial DNA, complete ge... 40 8.4
81dbj|AP006472.1| Balaena mysticetus mitochondrial DNA, complete g... 40 8.4
82gb|AF182175.1|AF182175 Neomys fodiens isolate m146 12S ribosomal... 40 8.4
83gb|AF182174.1|AF182174 Neomys fodiens isolate m122 12S ribosomal... 40 8.4
84gb|AF434822.1| Hylomys suillus 12S ribosomal RNA gene, complete ... 40 8.4
85gb|AF091689.1|AF091689 Bubalus depressicornis 12S ribosomal RNA ... 40 8.4
86gb|AF091688.1|AF091688 Syncerus caffer 12S ribosomal RNA gene, p... 40 8.4
87gb|U13079.1|BMU13079 Balaena mysticetus mitochondrion 12S rRNA g... 40 8.4
88gb|AC148973.4| Mus musculus BAC clone RP24-117C3 from 7, complet... 40 8.4
89gb|U78347.1|TTU78347 Taxidea taxus 12S ribosomal RNA gene, parti... 40 8.4
90gb|DQ275668.1| Antilope cervicapra 12S ribosomal RNA gene, parti... 40 8.4
91emb|Y08511.1|MIAF12S A.fulgens mitochondrial 12S rRNA gene 40 8.4
92emb|AJ245722.1|DSU245722 Dicerorhinus sumatrensis mitochondrial ... 40 8.4
93emb|AL352979.4|CNS05TBZ Human chromosome 14 DNA sequence BAC R-3... 40 8.4
94emb|AL928560.6| Mouse DNA sequence from clone RP23-353N23 on chr... 40 8.4
95gb|AF401509.1| Procapra gutturosa 12S ribosomal RNA gene, partia... 40 8.4
96gb|M86497.1|KOBMTTGRG Kobus ellipsiprymnus mitochondrial 12S and... 40 8.4
97gb|L21885.1|AISMTRG12S Ailurus fulgens mitochondrial 12S ribosom... 40 8.4 
>dbj|AK120353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066C10, full
            insert sequence
          Length = 1652

 Score =  468 bits (236), Expect = e-128
 Identities = 458/532 (86%)
 Strand = Plus / Minus

                                                                        
Query: 88   ttatgaagcggaacaggcttctagctttgggaggacgctgcgccacgcatcagcaatgtc 147
            |||||||| |||||||||||| ||||||||||||||||  ||||| ||||||||||| ||
Sbjct: 1394 ttatgaagtggaacaggcttcgagctttgggaggacgcctcgccatgcatcagcaatatc 1335

                                                                        
Query: 148  tttagctaactttgcttgacctttcgcaaactcatggaatgcaagtccaatatcagctgt 207
            |||||||||||||||||| ||||| ||||| ||||||||||| | |||||||||||||||
Sbjct: 1334 tttagctaactttgcttggcctttggcaaattcatggaatgcgaatccaatatcagctgt 1275

                                                                        
Query: 208  tttctgctcttggaatcgtgcaagctcgtcgttcattacactaactatgtgctcgtacct 267
            ||||||||||||||| ||||||||||| || ||||||||   ||||||||||||  ||||
Sbjct: 1274 tttctgctcttggaaacgtgcaagctcttcattcattactgcaactatgtgctcaaacct 1215

                                                                        
Query: 268  cttcgtagcctcctcactggctgctttcaactcactgaactcagtttctgactcggaaaa 327
            ||| ||||||||||||||| ||||| ||||||| | || ||||| ||||   || |||||
Sbjct: 1214 ctttgtagcctcctcactgtctgctgtcaactctcggacctcagcttctagttcagaaaa 1155

                                                                        
Query: 328  cttctcagggttcatgaacttcattttttcaaggttaagctctttatacttcctctcctg 387
             || |||||||||| |||||||| |||||| || |||| | ||||||| | | ||| |||
Sbjct: 1154 tttatcagggttcacgaacttcaatttttcgagattaacccctttatattccttctgctg 1095

                                                                        
Query: 388  gtccaagtcaaagtgctgcctgaaagcattggctcgatcaagcatagtggcctttattga 447
                || |||   |||||||||||||||||||||||||| | |||||| || ||||||||
Sbjct: 1094 aaataaatcatgatgctgcctgaaagcattggctcgatccaccatagttgcttttattga 1035

                                                                        
Query: 448  ctgcacagcacgcacataatctttcaaaggttcttcaaaattaaagagaaggttatctgc 507
            |||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 1034 ctgcacagcacgtacataatctttcaaaggctcttcaaagttaaagagaaggttgtctgc 975

                                                                        
Query: 508  ctctctttgcagctttattgacaacatttctgacttcgaaccaacttcggaaaacacctt 567
            ||||||||||||||||| ||| ||||| |||||||| || |||||||| ||||| || ||
Sbjct: 974  ctctctttgcagctttactgataacatctctgactttgatccaacttctgaaaaaacttt 915

                                                                
Query: 568  ctccaacgaatccccttcgcaggcgcctaaaagcttaatcgctttcccaaag 619
             ||||| || ||||||||||| || |||||||||||||| || || ||||||
Sbjct: 914  ttccaaggagtccccttcgcaagcacctaaaagcttaatagccttaccaaag 863
to top
>dbj|AK102304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089O16, full
            insert sequence
          Length = 1610

 Score =  468 bits (236), Expect = e-128
 Identities = 458/532 (86%)
 Strand = Plus / Minus

                                                                        
Query: 88   ttatgaagcggaacaggcttctagctttgggaggacgctgcgccacgcatcagcaatgtc 147
            |||||||| |||||||||||| ||||||||||||||||  ||||| ||||||||||| ||
Sbjct: 1358 ttatgaagtggaacaggcttcgagctttgggaggacgcctcgccatgcatcagcaatatc 1299

                                                                        
Query: 148  tttagctaactttgcttgacctttcgcaaactcatggaatgcaagtccaatatcagctgt 207
            |||||||||||||||||| ||||| ||||| ||||||||||| | |||||||||||||||
Sbjct: 1298 tttagctaactttgcttggcctttggcaaattcatggaatgcgaatccaatatcagctgt 1239

                                                                        
Query: 208  tttctgctcttggaatcgtgcaagctcgtcgttcattacactaactatgtgctcgtacct 267
            ||||||||||||||| ||||||||||| || ||||||||   ||||||||||||  ||||
Sbjct: 1238 tttctgctcttggaaacgtgcaagctcttcattcattactgcaactatgtgctcaaacct 1179

                                                                        
Query: 268  cttcgtagcctcctcactggctgctttcaactcactgaactcagtttctgactcggaaaa 327
            ||| ||||||||||||||| ||||| ||||||| | || ||||| ||||   || |||||
Sbjct: 1178 ctttgtagcctcctcactgtctgctgtcaactctcggacctcagcttctagttcagaaaa 1119

                                                                        
Query: 328  cttctcagggttcatgaacttcattttttcaaggttaagctctttatacttcctctcctg 387
             || |||||||||| |||||||| |||||| || |||| | ||||||| | | ||| |||
Sbjct: 1118 tttatcagggttcacgaacttcaatttttcgagattaacccctttatattccttctgctg 1059

                                                                        
Query: 388  gtccaagtcaaagtgctgcctgaaagcattggctcgatcaagcatagtggcctttattga 447
                || |||   |||||||||||||||||||||||||| | |||||| || ||||||||
Sbjct: 1058 aaataaatcatgatgctgcctgaaagcattggctcgatccaccatagttgcttttattga 999

                                                                        
Query: 448  ctgcacagcacgcacataatctttcaaaggttcttcaaaattaaagagaaggttatctgc 507
            |||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 998  ctgcacagcacgtacataatctttcaaaggctcttcaaagttaaagagaaggttgtctgc 939

                                                                        
Query: 508  ctctctttgcagctttattgacaacatttctgacttcgaaccaacttcggaaaacacctt 567
            ||||||||||||||||| ||| ||||| |||||||| || |||||||| ||||| || ||
Sbjct: 938  ctctctttgcagctttactgataacatctctgactttgatccaacttctgaaaaaacttt 879

                                                                
Query: 568  ctccaacgaatccccttcgcaggcgcctaaaagcttaatcgctttcccaaag 619
             ||||| || ||||||||||| || |||||||||||||| || || ||||||
Sbjct: 878  ttccaaggagtccccttcgcaagcacctaaaagcttaatagccttaccaaag 827
to top
>gb|AF162682.1|AF162682 Zea mays mutant sh2-7527 alien mRNA sequence
          Length = 1210

 Score =  387 bits (195), Expect = e-104
 Identities = 306/343 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267  tcttcgtagcctcctcactggctgctttcaactcactgaactcagtttctgactcggaaa 326
            |||| ||||||||||||||| ||||||||||||| || ||||||| |||||  |||| | 
Sbjct: 1066 tctttgtagcctcctcactgtctgctttcaactctctaaactcagattctgcttcggcat 1007

                                                                        
Query: 327  acttctcagggttcatgaacttcattttttcaaggttaagctctttatacttcctctcct 386
            |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 1006 acttctcagggttcatgaacttcaatttttcaagattaagctctttatacttcctctcct 947

                                                                        
Query: 387  ggtccaagtcaaagtgctgcctgaaagcattggctcgatcaagcatagtggcctttattg 446
            | ||||| ||||||||||| ||||||||||| |||||||| ||||||||||| ||||| |
Sbjct: 946  gatccaaatcaaagtgctgtctgaaagcattagctcgatccagcatagtggcttttatag 887

                                                                        
Query: 447  actgcacagcacgcacataatctttcaaaggttcttcaaaattaaagagaaggttatctg 506
            | || | ||||| ||||||||||||||| ||||||||||| ||||||||||| || ||||
Sbjct: 886  attgtagagcacacacataatctttcaagggttcttcaaagttaaagagaagattgtctg 827

                                                                        
Query: 507  cctctctttgcagctttattgacaacatttctgacttcgaaccaacttcggaaaacacct 566
            |||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 826  cctctctttgcagctttattgacaacatctctgactttgaaccaacttcagaaaacacct 767

                                                       
Query: 567  tctccaacgaatccccttcgcaggcgcctaaaagcttaatcgc 609
            | |||| | |||| ||||| || | ||| ||||||||||||||
Sbjct: 766  tttccatcaaatctccttcacaagagcccaaaagcttaatcgc 724
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  246 bits (124), Expect = 7e-62
 Identities = 190/212 (89%)
 Strand = Plus / Plus

                                                                            
Query: 88       ttatgaagcggaacaggcttctagctttgggaggacgctgcgccacgcatcagcaatgtc 147
                |||||||| |||||||||||| ||||||||||||||||  ||||| ||||||||||| ||
Sbjct: 37309737 ttatgaagtggaacaggcttcgagctttgggaggacgcctcgccatgcatcagcaatatc 37309796

                                                                            
Query: 148      tttagctaactttgcttgacctttcgcaaactcatggaatgcaagtccaatatcagctgt 207
                |||||||||||||||||| ||||| ||||| ||||||||||| | |||||||||||||||
Sbjct: 37309797 tttagctaactttgcttggcctttggcaaattcatggaatgcgaatccaatatcagctgt 37309856

                                                                            
Query: 208      tttctgctcttggaatcgtgcaagctcgtcgttcattacactaactatgtgctcgtacct 267
                ||||||||||||||| ||||||||||| || ||||||||   ||||||||||||  ||||
Sbjct: 37309857 tttctgctcttggaaacgtgcaagctcttcattcattactgcaactatgtgctcaaacct 37309916

                                                
Query: 268      cttcgtagcctcctcactggctgctttcaact 299
                ||| ||||||||||||||| ||||| ||||||
Sbjct: 37309917 ctttgtagcctcctcactgtctgctgtcaact 37309948



 Score =  107 bits (54), Expect = 4e-20
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                            
Query: 440      tttattgactgcacagcacgcacataatctttcaaaggttcttcaaaattaaagagaagg 499
                |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 37310539 tttattgactgcacagcacgtacataatctttcaaaggctcttcaaagttaaagagaagg 37310598

                          
Query: 500      ttatctgcct 509
                || |||||||
Sbjct: 37310599 ttgtctgcct 37310608



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                            
Query: 507      cctctctttgcagctttattgacaacatttctgacttcgaaccaacttcggaaaacacct 566
                |||||||||||||||||| ||| ||||| |||||||| || |||||||| ||||| || |
Sbjct: 37310709 cctctctttgcagctttactgataacatctctgactttgatccaacttctgaaaaaactt 37310768

                                                                     
Query: 567      tctccaacgaatccccttcgcaggcgcctaaaagcttaatcgctttcccaaag 619
                | ||||| || ||||||||||| || |||||||||||||| || || ||||||
Sbjct: 37310769 tttccaaggagtccccttcgcaagcacctaaaagcttaatagccttaccaaag 37310821



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 401      tgctgcctgaaagcattggctcgatcaagcatagtggcct 440
                |||||||||||||||||||||||||| | |||||| ||||
Sbjct: 37310390 tgctgcctgaaagcattggctcgatccaccatagttgcct 37310429
to top
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0423B08
          Length = 151490

 Score =  246 bits (124), Expect = 7e-62
 Identities = 190/212 (89%)
 Strand = Plus / Plus

                                                                         
Query: 88    ttatgaagcggaacaggcttctagctttgggaggacgctgcgccacgcatcagcaatgtc 147
             |||||||| |||||||||||| ||||||||||||||||  ||||| ||||||||||| ||
Sbjct: 21771 ttatgaagtggaacaggcttcgagctttgggaggacgcctcgccatgcatcagcaatatc 21830

                                                                         
Query: 148   tttagctaactttgcttgacctttcgcaaactcatggaatgcaagtccaatatcagctgt 207
             |||||||||||||||||| ||||| ||||| ||||||||||| | |||||||||||||||
Sbjct: 21831 tttagctaactttgcttggcctttggcaaattcatggaatgcgaatccaatatcagctgt 21890

                                                                         
Query: 208   tttctgctcttggaatcgtgcaagctcgtcgttcattacactaactatgtgctcgtacct 267
             ||||||||||||||| ||||||||||| || ||||||||   ||||||||||||  ||||
Sbjct: 21891 tttctgctcttggaaacgtgcaagctcttcattcattactgcaactatgtgctcaaacct 21950

                                             
Query: 268   cttcgtagcctcctcactggctgctttcaact 299
             ||| ||||||||||||||| ||||| ||||||
Sbjct: 21951 ctttgtagcctcctcactgtctgctgtcaact 21982



 Score =  107 bits (54), Expect = 4e-20
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                         
Query: 440   tttattgactgcacagcacgcacataatctttcaaaggttcttcaaaattaaagagaagg 499
             |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 22573 tttattgactgcacagcacgtacataatctttcaaaggctcttcaaagttaaagagaagg 22632

                       
Query: 500   ttatctgcct 509
             || |||||||
Sbjct: 22633 ttgtctgcct 22642



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                         
Query: 507   cctctctttgcagctttattgacaacatttctgacttcgaaccaacttcggaaaacacct 566
             |||||||||||||||||| ||| ||||| |||||||| || |||||||| ||||| || |
Sbjct: 22743 cctctctttgcagctttactgataacatctctgactttgatccaacttctgaaaaaactt 22802

                                                                  
Query: 567   tctccaacgaatccccttcgcaggcgcctaaaagcttaatcgctttcccaaag 619
             | ||||| || ||||||||||| || |||||||||||||| || || ||||||
Sbjct: 22803 tttccaaggagtccccttcgcaagcacctaaaagcttaatagccttaccaaag 22855



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 401   tgctgcctgaaagcattggctcgatcaagcatagtggcct 440
             |||||||||||||||||||||||||| | |||||| ||||
Sbjct: 22424 tgctgcctgaaagcattggctcgatccaccatagttgcct 22463
to top
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0679C12
          Length = 153666

 Score =  246 bits (124), Expect = 7e-62
 Identities = 190/212 (89%)
 Strand = Plus / Plus

                                                                          
Query: 88     ttatgaagcggaacaggcttctagctttgggaggacgctgcgccacgcatcagcaatgtc 147
              |||||||| |||||||||||| ||||||||||||||||  ||||| ||||||||||| ||
Sbjct: 146726 ttatgaagtggaacaggcttcgagctttgggaggacgcctcgccatgcatcagcaatatc 146785

                                                                          
Query: 148    tttagctaactttgcttgacctttcgcaaactcatggaatgcaagtccaatatcagctgt 207
              |||||||||||||||||| ||||| ||||| ||||||||||| | |||||||||||||||
Sbjct: 146786 tttagctaactttgcttggcctttggcaaattcatggaatgcgaatccaatatcagctgt 146845

                                                                          
Query: 208    tttctgctcttggaatcgtgcaagctcgtcgttcattacactaactatgtgctcgtacct 267
              ||||||||||||||| ||||||||||| || ||||||||   ||||||||||||  ||||
Sbjct: 146846 tttctgctcttggaaacgtgcaagctcttcattcattactgcaactatgtgctcaaacct 146905

                                              
Query: 268    cttcgtagcctcctcactggctgctttcaact 299
              ||| ||||||||||||||| ||||| ||||||
Sbjct: 146906 ctttgtagcctcctcactgtctgctgtcaact 146937



 Score =  107 bits (54), Expect = 4e-20
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                          
Query: 440    tttattgactgcacagcacgcacataatctttcaaaggttcttcaaaattaaagagaagg 499
              |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 147528 tttattgactgcacagcacgtacataatctttcaaaggctcttcaaagttaaagagaagg 147587

                        
Query: 500    ttatctgcct 509
              || |||||||
Sbjct: 147588 ttgtctgcct 147597



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                          
Query: 507    cctctctttgcagctttattgacaacatttctgacttcgaaccaacttcggaaaacacct 566
              |||||||||||||||||| ||| ||||| |||||||| || |||||||| ||||| || |
Sbjct: 147698 cctctctttgcagctttactgataacatctctgactttgatccaacttctgaaaaaactt 147757

                                                                   
Query: 567    tctccaacgaatccccttcgcaggcgcctaaaagcttaatcgctttcccaaag 619
              | ||||| || ||||||||||| || |||||||||||||| || || ||||||
Sbjct: 147758 tttccaaggagtccccttcgcaagcacctaaaagcttaatagccttaccaaag 147810



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 401    tgctgcctgaaagcattggctcgatcaagcatagtggcct 440
              |||||||||||||||||||||||||| | |||||| ||||
Sbjct: 147379 tgctgcctgaaagcattggctcgatccaccatagttgcct 147418
to top
>ref|NM_190716.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 987

 Score =  242 bits (122), Expect = 1e-60
 Identities = 188/210 (89%)
 Strand = Plus / Minus

                                                                       
Query: 88  ttatgaagcggaacaggcttctagctttgggaggacgctgcgccacgcatcagcaatgtc 147
           |||||||| |||||||||||| ||||||||||||||||  ||||| ||||||||||| ||
Sbjct: 987 ttatgaagtggaacaggcttcgagctttgggaggacgcctcgccatgcatcagcaatatc 928

                                                                       
Query: 148 tttagctaactttgcttgacctttcgcaaactcatggaatgcaagtccaatatcagctgt 207
           |||||||||||||||||| ||||| ||||| ||||||||||| | |||||||||||||||
Sbjct: 927 tttagctaactttgcttggcctttggcaaattcatggaatgcgaatccaatatcagctgt 868

                                                                       
Query: 208 tttctgctcttggaatcgtgcaagctcgtcgttcattacactaactatgtgctcgtacct 267
           ||||||||||||||| ||||||||||| || ||||||||   ||||||||||||  ||||
Sbjct: 867 tttctgctcttggaaacgtgcaagctcttcattcattactgcaactatgtgctcaaacct 808

                                         
Query: 268 cttcgtagcctcctcactggctgctttcaa 297
           ||| ||||||||||||||| ||||| ||||
Sbjct: 807 ctttgtagcctcctcactgtctgctgtcaa 778



 Score =  198 bits (100), Expect = 2e-47
 Identities = 160/180 (88%)
 Strand = Plus / Minus

                                                                       
Query: 440 tttattgactgcacagcacgcacataatctttcaaaggttcttcaaaattaaagagaagg 499
           |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 776 tttattgactgcacagcacgtacataatctttcaaaggctcttcaaagttaaagagaagg 717

                                                                       
Query: 500 ttatctgcctctctttgcagctttattgacaacatttctgacttcgaaccaacttcggaa 559
           || |||||||||||||||||||||| ||| ||||| |||||||| || |||||||| |||
Sbjct: 716 ttgtctgcctctctttgcagctttactgataacatctctgactttgatccaacttctgaa 657

                                                                       
Query: 560 aacaccttctccaacgaatccccttcgcaggcgcctaaaagcttaatcgctttcccaaag 619
           || || || ||||| || ||||||||||| || |||||||||||||| || || ||||||
Sbjct: 656 aaaactttttccaaggagtccccttcgcaagcacctaaaagcttaatagccttaccaaag 597
to top
>gb|AY103854.1| Zea mays PCO070219 mRNA sequence
          Length = 1127

 Score =  121 bits (61), Expect = 3e-24
 Identities = 94/105 (89%)
 Strand = Plus / Minus

                                                                       
Query: 505 tgcctctctttgcagctttattgacaacatttctgacttcgaaccaacttcggaaaacac 564
           |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 222 tgcctctctttgcagctttattgacaacatctctgactttgaaccaacttcagaaaacac 163

                                                        
Query: 565 cttctccaacgaatccccttcgcaggcgcctaaaagcttaatcgc 609
           ||| |||| | |||| ||||| || | ||| ||||||||||||||
Sbjct: 162 cttttccatcaaatctccttcacaagagcccaaaagcttaatcgc 118
to top
>gb|AF293457.1|AF293457S1 Zea mays truncated insertion sequence VADER mutant shrunken-2 (sh2)
            pseudogene, complete sequence
          Length = 6873

 Score =  117 bits (59), Expect = 4e-23
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                        
Query: 507  cctctctttgcagctttattgacaacatttctgacttcgaaccaacttcggaaaacacct 566
            |||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 5543 cctctctttgcagctttattgacaacatctctgactttgaaccaacttcagaaaacacct 5484

                                                       
Query: 567  tctccaacgaatccccttcgcaggcgcctaaaagcttaatcgc 609
            | |||| | |||| ||||| || | ||| ||||||||||||||
Sbjct: 5483 tttccatcaaatctccttcacaagagcccaaaagcttaatcgc 5441



 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                        
Query: 362  ttaagctctttatacttcctctcctggtccaagtcaaagtgctgcctgaaagcattggct 421
            |||||||||||||||||||||||||| ||||| |||||| |||| ||||||||||| |||
Sbjct: 5892 ttaagctctttatacttcctctcctgatccaaatcaaagcgctgtctgaaagcattagct 5833

                               
Query: 422  cgatcaagcatagtggcct 440
            ||||| |||||||||||||
Sbjct: 5832 cgatccagcatagtggcct 5814



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 454  agcacgcacataatctttcaaaggttcttcaaaattaaagagaaggttatctgcct 509
            ||||| ||||||||||||||| ||||||||||| ||||||||||| || |||||||
Sbjct: 5712 agcacacacataatctttcaagggttcttcaaagttaaagagaagattgtctgcct 5657



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 305  aactcagtttctgactcggaaaacttctcagggttcatgaacttcattttttca 358
            ||||||| |||||  |||| | |||||||||||||||||||||||| |||||||
Sbjct: 6152 aactcagattctgcttcggcatacttctcagggttcatgaacttcaatttttca 6099



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 267  tcttcgtagcctcctcactggctgctttcaact 299
            |||| ||||||||||||||| ||||||||||||
Sbjct: 6288 tctttgtagcctcctcactgtctgctttcaact 6256
to top
>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 149     ttagctaactttgcttgaccttt 171
               |||||||||||||||||||||||
Sbjct: 2454598 ttagctaactttgcttgaccttt 2454620
to top
>emb|AL732395.9| Human DNA sequence from clone RP11-77F5 on chromosome 10 Contains the
             3' end of the gene for uncharacterized hematopoietic
             stem/progenitor cells (MDS026), complete sequence
          Length = 54050

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 388   gtccaagtcaaagtgctgcctg 409
             ||||||||||||||||||||||
Sbjct: 23668 gtccaagtcaaagtgctgcctg 23647
to top
>ref|NM_120696.2| Arabidopsis thaliana unknown protein AT5G06140 mRNA, complete cds
          Length = 1427

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 161  gcttgacctttcgcaaactcatggaatgc 189
            ||||| ||||||||||||| |||||||||
Sbjct: 1150 gcttgtcctttcgcaaactgatggaatgc 1122
to top
>ref|XM_509473.1| PREDICTED: Pan troglodytes similar to CG1842-PA (LOC452356), mRNA
          Length = 1611

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 376 cttcctctcctggtccaagtcaaag 400
           ||||||| |||||||||||||||||
Sbjct: 621 cttcctcacctggtccaagtcaaag 597
to top
>ref|XM_424703.1| PREDICTED: Gallus gallus similar to ankyrin repeat domain 32
            (LOC427111), mRNA
          Length = 3478

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 390  ccaagtcaaagtgctgcctga 410
            |||||||||||||||||||||
Sbjct: 1986 ccaagtcaaagtgctgcctga 2006
to top
>ref|XM_425390.1| PREDICTED: Gallus gallus similar to Williams Beuren syndrome
            chromosome region 14 isoform alpha; WS
            basic-helix-loop-helix leucine zipper protein
            (LOC427818), mRNA
          Length = 1806

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 388  gtccaagtcaaagtgctgcct 408
            |||||||||||||||||||||
Sbjct: 1227 gtccaagtcaaagtgctgcct 1207
to top
>gb|AC091091.2| Gallus gallus clone WAG-93J15, complete sequence
          Length = 136822

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 388   gtccaagtcaaagtgctgcct 408
             |||||||||||||||||||||
Sbjct: 18004 gtccaagtcaaagtgctgcct 18024
to top
>gb|AY080809.1| Arabidopsis thaliana putative sorting nexin protein (At5g06140)
           mRNA, partial cds
          Length = 908

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 161 gcttgacctttcgcaaactcatggaatgc 189
           ||||| ||||||||||||| |||||||||
Sbjct: 631 gcttgtcctttcgcaaactgatggaatgc 603
to top
>dbj|AK091526.1| Homo sapiens cDNA FLJ34207 fis, clone FCBBF3020163, moderately
            similar to Chlamydomonas reinhardtii dhc1 gene for
            1-alpha dynein heavy chain
          Length = 2797

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 376  cttcctctcctggtccaagtcaaag 400
            ||||||| |||||||||||||||||
Sbjct: 1811 cttcctcacctggtccaagtcaaag 1787
to top
>emb|CR407078.1| Gallus gallus finished cDNA, clone ChEST749e9
          Length = 1649

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 390 ccaagtcaaagtgctgcctga 410
           |||||||||||||||||||||
Sbjct: 156 ccaagtcaaagtgctgcctga 176
to top
>dbj|AB095937.2| Homo sapiens mRNA for KIAA2017 protein, partial cds
          Length = 9388

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 376  cttcctctcctggtccaagtcaaag 400
            ||||||| |||||||||||||||||
Sbjct: 8406 cttcctcacctggtccaagtcaaag 8382
to top
>gb|AC079315.30| Homo sapiens 12 BAC RP11-380L11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 121450

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 376    cttcctctcctggtccaagtcaaag 400
              ||||||| |||||||||||||||||
Sbjct: 107235 cttcctcacctggtccaagtcaaag 107211
to top
>emb|BX830901.1|CNS0A0TB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS38ZC11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1384

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 161  gcttgacctttcgcaaactcatggaatgc 189
            ||||| ||||||||||||| |||||||||
Sbjct: 1150 gcttgtcctttcgcaaactgatggaatgc 1122
to top
>gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, complete sequence
          Length = 180016

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   ctcctcactggctgctttcaa 297
             |||||||||||||||||||||
Sbjct: 59796 ctcctcactggctgctttcaa 59816
to top
>dbj|AP002544.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBL20
          Length = 35301

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 161 gcttgacctttcgcaaactcatggaatgc 189
           ||||| ||||||||||||| |||||||||
Sbjct: 54  gcttgtcctttcgcaaactgatggaatgc 82
to top
>gb|AC140260.3| Mus musculus BAC clone RP23-311O16 from 6, complete sequence
          Length = 252791

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 512    ctttgcagctttattgacaac 532
              |||||||||||||||||||||
Sbjct: 174768 ctttgcagctttattgacaac 174788
to top
>gb|AC102638.13| Mus musculus chromosome 3, clone RP23-406D2, complete sequence
          Length = 172817

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    catggaatgcaagtccaata 199
              ||||||||||||||||||||
Sbjct: 125163 catggaatgcaagtccaata 125182
to top
>ref|NM_175354.2| Mus musculus RIKEN cDNA C030016D13 gene (C030016D13Rik), mRNA
          Length = 2537

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 agctgttttctgctcttgga 221
           ||||||||||||||||||||
Sbjct: 461 agctgttttctgctcttgga 480
to top
>gb|AY702618.1| Bubalus bubalis breed Haikou mitochondrion, complete genome
          Length = 16359

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 943 aatagcctaaaactcaaagg 962
to top
>gb|AY390369.1| Ailurus fulgens from HeFei Zoo 12S ribosomal RNA gene, partial
          sequence; mitochondrial
          Length = 393

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 61 aatagcctaaaactcaaagg 80
to top
>gb|AY390368.1| Ailurus fulgens from Wolong 12S ribosomal RNA gene, partial
          sequence; mitochondrial
          Length = 393

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 61 aatagcctaaaactcaaagg 80
to top
>gb|AY390367.1| Ailurus fulgens from Wolong 12S ribosomal RNA gene, partial
          sequence; mitochondrial
          Length = 393

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 61 aatagcctaaaactcaaagg 80
to top
>gb|AC132595.3| Mus musculus BAC clone RP24-229G7 from chromosome 7, complete sequence
          Length = 155547

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   actgcacagcacgcacataa 466
             ||||||||||||||||||||
Sbjct: 37142 actgcacagcacgcacataa 37161
to top
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     aaaaaatagcctaaaactca 42
              ||||||||||||||||||||
Sbjct: 990448 aaaaaatagcctaaaactca 990467
to top
>gb|AY184437.1| Alces alces 12S ribosomal RNA gene, complete sequence
          Length = 956

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 497 aatagcctaaaactcaaagg 516
to top
>gb|AY395840.1| Glossophaga soricina 12S ribosomal RNA gene, partial sequence;
           tRNA-Val gene, complete sequence; and 16S ribosomal RNA
           gene, partial sequence; mitochondrial
          Length = 2601

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 507 aatagcctaaaactcaaagg 526
to top
>gb|AY326102.1| Peromyscus maniculatus interphotoreceptor retinoid-binding protein
           (IRBP) gene, partial cds
          Length = 1233

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 266 ctcttcgtagcctcctcactggctgctt 293
           ||||||||||||| |||| |||||||||
Sbjct: 41  ctcttcgtagcctgctcaatggctgctt 14
to top
>gb|AY121986.1| Giraffa camelopardalis 12S ribosomal RNA gene, complete sequence;
           mitochondrial gene for mitochondrial product
          Length = 956

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 497 aatagcctaaaactcaaagg 516
to top
>gb|AY495458.1| Nyctinomops femorosaccus 12S ribosomal RNA, tRNA-Val, and 16S
           ribosomal RNA genes, complete sequence; mitochondrial
          Length = 2613

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 508 aatagcctaaaactcaaagg 527
to top
>gb|AY027824.1| Myotis acathoe isolate 149 12S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 343

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 202 aatagcctaaaactcaaagg 221
to top
>gb|AY027823.1| Myotis acathoe isolate 158 12S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 374

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 202 aatagcctaaaactcaaagg 221
to top
>gb|AC025540.7| Homo sapiens BAC clone RP11-295N22 from 7, complete sequence
          Length = 160896

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   ctctttatacttcctctcct 386
             ||||||||||||||||||||
Sbjct: 27304 ctctttatacttcctctcct 27285
to top
>gb|AC004485.2| Homo sapiens BAC clone CTB-118E13 from 7, complete sequence
          Length = 185516

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    ggttaagctctttatacttc 379
              ||||||||||||||||||||
Sbjct: 183632 ggttaagctctttatacttc 183613
to top
>gb|AC165968.3| Mus musculus BAC clone RP23-181K4 from chromosome 7, complete
            sequence
          Length = 190840

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 447  actgcacagcacgcacataa 466
            ||||||||||||||||||||
Sbjct: 6292 actgcacagcacgcacataa 6311
to top
>gb|AC142353.1| Pan troglodytes BAC clone RP43-21M1 from 7, complete sequence
          Length = 182634

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   ggttaagctctttatacttc 379
             ||||||||||||||||||||
Sbjct: 56194 ggttaagctctttatacttc 56213
to top
>gb|AC124973.8| Mus musculus strain C57BL/6J clone rp23-329l13 map 19, complete
             sequence
          Length = 199006

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   agctgttttctgctcttgga 221
             ||||||||||||||||||||
Sbjct: 27657 agctgttttctgctcttgga 27638
to top
>emb|AL359770.12| Human DNA sequence from clone RP11-286B9 on chromosome 13, complete
             sequence
          Length = 104638

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   gaacttcattttttcaaggt 362
             ||||||||||||||||||||
Sbjct: 21791 gaacttcattttttcaaggt 21810
to top
>gb|AY227534.1| Protoxerus stangeri isolate Pst1 12S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 828

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 494 aatagcctaaaactcaaagg 513
to top
>gb|AY227526.1| Paraxerus alexandri isolate Pax 12S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 816

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 482 aatagcctaaaactcaaagg 501
to top
>gb|AY227525.1| Funisciurus pyrropus isolate Fpy1 12S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 816

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 488 aatagcctaaaactcaaagg 507
to top
>gb|AF334513.1| Mesoplodon bidens 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 430

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 357 aatagcctaaaactcaaagg 338
to top
>emb|AL645532.16| Mouse DNA sequence from clone RP23-295E4 on chromosome 11 Contains two
              novel genes, the 3' end of the Egfr gene for epidermal
              growth factor receptor and the gene for a novel F-box
              domain containing protein, complete sequence
          Length = 161348

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    aaaggttcttcaaaattaaa 492
              ||||||||||||||||||||
Sbjct: 144365 aaaggttcttcaaaattaaa 144346
to top
>emb|AJ554052.1|CMA554052 Caperea marginata complete mitochondrial genome
          Length = 16383

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 577 aatagcctaaaactcaaagg 596
to top
>emb|AJ554051.1|BMY554051 Balaena mysticetus complete mitochondrial genome
          Length = 16390

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 577 aatagcctaaaactcaaagg 596
to top
>gb|DQ410815.1| Hipposideros galeritus isolate NNP099 12S ribosomal RNA gene,
          partial sequence; mitochondrial
          Length = 409

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 37 aatagcctaaaactcaaagg 56
to top
>gb|DQ410791.1| Hipposideros ridleyi isolate B160 12S ribosomal RNA gene, partial
          sequence; mitochondrial
          Length = 409

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 37 aatagcctaaaactcaaagg 56
to top
>gb|AF263232.1| Rhinopoma hardwickei isolate TK40884 12S ribosomal RNA gene,
           complete sequence; tRNA-Val gene, complete sequence; and
           16S ribosomal RNA gene, complete sequence; mitochondrial
           genes for mitochondrial products
          Length = 2600

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 506 aatagcctaaaactcaaagg 525
to top
>gb|AF263231.1| Rhinopoma hardwickei isolate TK25643 12S ribosomal RNA gene,
           complete sequence; tRNA-Val gene, complete sequence; and
           16S ribosomal RNA gene, complete sequence; mitochondrial
           genes for mitochondrial products
          Length = 2600

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 506 aatagcctaaaactcaaagg 525
to top
>gb|DQ191517.1| Petromyscus collinus interphotoreceptor retinoid-binding protein
           (IRBP) gene, partial cds
          Length = 1233

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 266 ctcttcgtagcctcctcactggctgctt 293
           ||||||||||||| |||| |||||||||
Sbjct: 41  ctcttcgtagcctgctcaatggctgctt 14
to top
>gb|S80939.1| 12S rRNA [Ailurus fulgens=red pandas, Mitochondrial, 349 nt]
          Length = 349

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 28 aatagcctaaaactcaaagg 47
to top
>gb|AF249983.1|AF249983 Raphicerus melanotis 12S ribosomal RNA gene, partial sequence;
          mitochondrial gene for mitochondrial product
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|AF249982.1|AF249982 Raphicerus sharpei 12S ribosomal RNA gene, partial sequence;
          mitochondrial gene for mitochondrial product
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|U12826.1|AFU12826 Ailurus fulgens mitochondrion 12S rRNA gene, partial sequence
          Length = 393

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 61 aatagcctaaaactcaaagg 80
to top
>gb|AY488491.1| Bubalus bubalis mitochondrion, complete genome
          Length = 16355

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 567 aatagcctaaaactcaaagg 586
to top
>gb|U87012.1|BDU87012 Bubalus depressicornis 12S ribosomal RNA gene, mitochondrial gene
          for mitochondrial RNA, partial sequence
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|U87011.1|SCU87011 Syncerus caffer 12S ribosomal RNA gene, mitochondrial gene for
          mitochondrial RNA, partial sequence
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|U87008.1|ACU87008 Antilope cervicapra 12S ribosomal RNA gene, mitochondrial gene
          for mitochondrial RNA, partial sequence
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|U87007.1|GSU87007 Gazella subgutturosa 12S ribosomal RNA gene, mitochondrial gene
          for mitochondrial RNA, partial sequence
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|U87002.1|RCU87002 Raphicerus campestris 12S ribosomal RNA gene, mitochondrial gene
          for mitochondrial RNA, partial sequence
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|U87001.1|KVU87001 Kobus vardoni 12S ribosomal RNA gene, mitochondrial gene for
          mitochondrial RNA, partial sequence
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|U87000.1|KKU87000 Kobus kob 12S ribosomal RNA gene, mitochondrial gene for
          mitochondrial RNA, partial sequence
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|U86999.1|KLU86999 Kobus leche 12S ribosomal RNA gene, mitochondrial gene for
          mitochondrial RNA, partial sequence
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|U86998.1|KMU86998 Kobus megaceros 12S ribosomal RNA gene, mitochondrial gene for
          mitochondrial RNA, partial sequence
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>gb|U86965.1|KEU86965 Kobus ellipsiprymnus 12S ribosomal RNA gene, mitochondrial gene
          for mitochondrial RNA, partial sequence
          Length = 241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 5  aatagcctaaaactcaaagg 24
to top
>dbj|AK047713.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
           enriched library, clone:C030016D13 product:hypothetical
           protein, full insert sequence
          Length = 2537

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 agctgttttctgctcttgga 221
           ||||||||||||||||||||
Sbjct: 461 agctgttttctgctcttgga 480
to top
>gb|AF231029.1|AF231029 Pseudonovibos spiralis horn tRNA-Phe gene, partial sequence; and
           12S ribosomal RNA gene, partial sequence; mitochondrial
           genes for mitochondrial products
          Length = 962

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 533 aatagcctaaaactcaaagg 552
to top
>gb|AF231028.1|AF231028 Bubalus bubalus horn tRNA-Phe gene, partial sequence; and 12S
           ribosomal RNA gene, partial sequence; mitochondrial
           genes for mitochondrial products
          Length = 972

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 533 aatagcctaaaactcaaagg 552
to top
>gb|BC094907.1| Mus musculus cDNA clone IMAGE:30021652
          Length = 2610

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 agctgttttctgctcttgga 221
           ||||||||||||||||||||
Sbjct: 495 agctgttttctgctcttgga 514
to top
>gb|AY012154.1| Manis pentadactyla 12S ribosomal RNA gene, partial sequence; and
           tRNA-Val gene, complete sequence; mitochondrial genes
           for mitochondrial products
          Length = 1022

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 504 aatagcctaaaactcaaagg 523
to top
>gb|AC147298.4| Pan troglodytes BAC clone RP43-58G7 from chromosome 7, complete
             sequence
          Length = 228916

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   ggttaagctctttatacttc 379
             ||||||||||||||||||||
Sbjct: 75617 ggttaagctctttatacttc 75598
to top
>dbj|AP006475.1| Caperea marginata mitochondrial DNA, complete genome
          Length = 16384

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 577 aatagcctaaaactcaaagg 596
to top
>dbj|AP006472.1| Balaena mysticetus mitochondrial DNA, complete genome
          Length = 16389

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 577 aatagcctaaaactcaaagg 596
to top
>gb|AF182175.1|AF182175 Neomys fodiens isolate m146 12S ribosomal RNA gene, partial
          sequence; mitochondrial gene for mitochondrial product
          Length = 378

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 59 aatagcctaaaactcaaagg 78
to top
>gb|AF182174.1|AF182174 Neomys fodiens isolate m122 12S ribosomal RNA gene, partial
          sequence; mitochondrial gene for mitochondrial product
          Length = 378

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 59 aatagcctaaaactcaaagg 78
to top
>gb|AF434822.1| Hylomys suillus 12S ribosomal RNA gene, complete sequence;
           mitochondrial gene for mitochondrial product
          Length = 962

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 504 aatagcctaaaactcaaagg 523
to top
>gb|AF091689.1|AF091689 Bubalus depressicornis 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 957

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 498 aatagcctaaaactcaaagg 517
to top
>gb|AF091688.1|AF091688 Syncerus caffer 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 955

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 497 aatagcctaaaactcaaagg 516
to top
>gb|U13079.1|BMU13079 Balaena mysticetus mitochondrion 12S rRNA gene, partial sequence
          Length = 386

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 53 aatagcctaaaactcaaagg 72
to top
>gb|AC148973.4| Mus musculus BAC clone RP24-117C3 from 7, complete sequence
          Length = 197165

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 447  actgcacagcacgcacataa 466
            ||||||||||||||||||||
Sbjct: 7250 actgcacagcacgcacataa 7231
to top
>gb|U78347.1|TTU78347 Taxidea taxus 12S ribosomal RNA gene, partial sequence, tRNA Val
          gene, complete sequence and 16S ribosomal RNA gene,
          partial sequence, mitochondrial genes encoding
          mitochondrial RNAs
          Length = 1062

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 39 aatagcctaaaactcaaagg 58
to top
>gb|DQ275668.1| Antilope cervicapra 12S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 440

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 86  aatagcctaaaactcaaagg 105
to top
>emb|Y08511.1|MIAF12S A.fulgens mitochondrial 12S rRNA gene
          Length = 964

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 507 aatagcctaaaactcaaagg 526
to top
>emb|AJ245722.1|DSU245722 Dicerorhinus sumatrensis mitochondrial 12S rRNA gene
          Length = 973

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 505 aatagcctaaaactcaaagg 524
to top
>emb|AL352979.4|CNS05TBZ Human chromosome 14 DNA sequence BAC R-368P15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 155692

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   aatctttcaaaggttcttca 484
             ||||||||||||||||||||
Sbjct: 37879 aatctttcaaaggttcttca 37898
to top
>emb|AL928560.6| Mouse DNA sequence from clone RP23-353N23 on chromosome 2, complete
              sequence
          Length = 209502

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 478    ttcttcaaaattaaagagaa 497
              ||||||||||||||||||||
Sbjct: 113462 ttcttcaaaattaaagagaa 113443
to top
>gb|AF401509.1| Procapra gutturosa 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 439

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 85  aatagcctaaaactcaaagg 104
to top
>gb|M86497.1|KOBMTTGRG Kobus ellipsiprymnus mitochondrial 12S and 16S ribosomal RNA genes,
           and Phe-, Val-, and Leu-tRNA genes
          Length = 2678

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  aatagcctaaaactcaaagg 46
           ||||||||||||||||||||
Sbjct: 562 aatagcctaaaactcaaagg 581
to top
>gb|L21885.1|AISMTRG12S Ailurus fulgens mitochondrial 12S ribosomal RNA (12S rRNA) gene
          fragment
          Length = 349

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 27 aatagcctaaaactcaaagg 46
          ||||||||||||||||||||
Sbjct: 45 aatagcctaaaactcaaagg 64


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,784,437
Number of Sequences: 3902068
Number of extensions: 5784437
Number of successful extensions: 131190
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130972
Number of HSP's gapped (non-prelim): 218
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top