ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LIFR_MOUSE (P42703) Leukemia inhibitory factor receptor precurso... 28 4.6

>LIFR_MOUSE (P42703) Leukemia inhibitory factor receptor precursor (LIF|
           receptor) (LIF-R) (D-factor/LIF receptor) (CD118
           antigen)
          Length = 1092

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/59 (25%), Positives = 32/59 (54%)
 Frame = -2

Query: 249 KATAVKSASKWRPRPTNVETLLAYFKEKNDXESVDRLMSVLRSRGCAENEEXKSLIDTY 73
           +AT  K    WR   ++ + L+ Y+K     E+  +++S   +  C+ NEE +S+++ +
Sbjct: 527 EATPSKGPDTWREWSSDGKNLIVYWKPLPINEANGKILSY--NVSCSLNEETQSVLEIF 583


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,927,552
Number of Sequences: 219361
Number of extensions: 516073
Number of successful extensions: 1357
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top