ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38p18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY596604.1| Saccharum officinarum clone SCRLLR1038D03, comple... 68 4e-08
2gb|AY104141.1| Zea mays PCO097932 mRNA sequence 56 2e-04
3gb|BT017823.1| Zea mays clone EL01N0508B10.c mRNA sequence 52 0.002
4gb|AY107916.1| Zea mays PCO138780 mRNA sequence 52 0.002
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
6dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
7dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
8dbj|AK100439.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
9dbj|AK072195.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
10dbj|AK070157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
11dbj|AK065855.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
12emb|AL080315.18|HSDJ6P5 Human DNA sequence from clone RP1-6P5 on... 44 0.61
13ref|XM_641940.1| Dictyostelium discoideum filamin/ABP280 repeat-... 42 2.4
14gb|AC009403.5| Homo sapiens PAC clone RP5-1015O24 from 7, comple... 42 2.4
15emb|AL662928.4| Human DNA sequence from clone RP11-92H11 on chro... 42 2.4
16gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Can... 42 2.4
17ref|NM_076622.3| Caenorhabditis elegans C15H9.7 (kynureninase) m... 42 2.4
18dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
19gb|AF303267.1|AF303267 Caenorhabditis elegans kynureninase (XG72... 42 2.4
20gb|AC092845.6| Homo sapiens BAC clone RP11-480J15 from 2, comple... 42 2.4
21gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079... 42 2.4
22gb|AC068538.8| Homo sapiens BAC clone RP11-141G4 from 2, complet... 42 2.4
23gb|U56965.1| Caenorhabditis elegans cosmid C15H9, complete sequence 42 2.4
24gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.67... 42 2.4
25gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
26gb|AC124739.2| Mus musculus BAC clone RP23-344H4 from chromosome... 40 9.5
27gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome... 40 9.5
28gb|AC127246.3| Mus musculus BAC clone RP24-424L20 from chromosom... 40 9.5
29ref|XM_738076.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 9.5
30gb|AC163723.3| Mus musculus BAC clone RP23-450O11 from chromosom... 40 9.5
31emb|X99688.1|HSTYL H.sapiens mRNA from TYL gene 40 9.5
32gb|AC136504.23| Medicago truncatula clone mth2-13m6, complete se... 40 9.5
33gb|BC056513.1| Danio rerio La ribonucleoprotein domain family, m... 40 9.5
34emb|BX548163.15| Zebrafish DNA sequence from clone CH211-135J7 i... 40 9.5
35gb|AC154636.2| Mus musculus BAC clone RP23-302E1 from chromosome... 40 9.5
36dbj|AK083827.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 9.5
37emb|BX890605.4| Mouse DNA sequence from clone RP23-29K12 on chro... 40 9.5
38gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, comple... 40 9.5
39gb|AC006210.4| Homo sapiens X BAC GS1-309P15 (Genome Systems Hum... 40 9.5
40gb|AC140780.3| Mus musculus BAC clone RP24-500J16 from chromosom... 40 9.5
41emb|CT573324.3| CH251-10E6, complete sequence 40 9.5
42emb|CR385063.6| Zebrafish DNA sequence from clone CH211-250G4 in... 40 9.5
43emb|CT572990.6| Mouse DNA sequence from clone RP24-393N9 on chro... 40 9.5
44gb|AC158366.5| Mus musculus BAC clone RP23-33N12 from chromosome... 40 9.5
45emb|AJ555625.1|PBE555625 Plasmodium berghei mRNA for metacaspase... 40 9.5
46gb|AC150747.2| Mus musculus BAC clone RP23-249E15 from 5, comple... 40 9.5
47emb|AL929494.8| Zebrafish DNA sequence from clone CH211-127N19 i... 40 9.5 
>gb|AY596604.1| Saccharum officinarum clone SCRLLR1038D03, complete sequence
          Length = 2630

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/73 (87%), Gaps = 2/73 (2%)
 Strand = Plus / Minus

                                                                        
Query: 446  tctgaaacctacacttaagtcacagactgaat--aaggctactttcctgagcccatggaa 503
            ||||||||||| ||||| ||||||  |||||   ||||||||||||||||||  ||||||
Sbjct: 2161 tctgaaacctaaacttacgtcacaacctgaagtgaaggctactttcctgagcaaatggaa 2102

                         
Query: 504  cttctccaagctc 516
            |||||||||||||
Sbjct: 2101 cttctccaagctc 2089



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                        
Query: 604  atcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaaac 663
            ||||||||||||| ||||| ||||||||||| ||||| |||||||| | |||||| ||||
Sbjct: 1971 atcaaccaggaacagattctgaagtgatgtgcccacctctagcacctgagggattgaaac 1912



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 378  gtgctatagtaaatgacccacataa 402
            |||||||| ||||||||||||||||
Sbjct: 2221 gtgctatattaaatgacccacataa 2197
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>gb|AY104141.1| Zea mays PCO097932 mRNA sequence
          Length = 1519

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 604  atcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaaaac 663
            |||| |||||||| ||||| ||||||||||| ||||| |||||||| | |||||| ||||
Sbjct: 1413 atcatccaggaacagattctgaagtgatgtgcccacctctagcacctgagggattgaaac 1354
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>gb|BT017823.1| Zea mays clone EL01N0508B10.c mRNA sequence
          Length = 1099

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 490 ctgagcccatggaacttctccaagctcaca 519
           ||||||| ||||||||||||||||||||||
Sbjct: 331 ctgagccaatggaacttctccaagctcaca 302
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>gb|AY107916.1| Zea mays PCO138780 mRNA sequence
          Length = 465

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 490 ctgagcccatggaacttctccaagctcaca 519
           ||||||| ||||||||||||||||||||||
Sbjct: 214 ctgagccaatggaacttctccaagctcaca 185
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 602      atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaa 660
                ||||||||||||||| || ||||| |||||||  |||||| | || |||| ||||||||
Sbjct: 32432037 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaa 32431979
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>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665A11
          Length = 166421

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 602   atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaa 660
             ||||||||||||||| || ||||| |||||||  |||||| | || |||| ||||||||
Sbjct: 19558 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaa 19500
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>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1143G03
          Length = 137770

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 602    atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaa 660
              ||||||||||||||| || ||||| |||||||  |||||| | || |||| ||||||||
Sbjct: 111534 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaa 111476
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>dbj|AK100439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089F03, full
            insert sequence
          Length = 3369

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 602  atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaa 660
            ||||||||||||||| || ||||| |||||||  |||||| | || |||| ||||||||
Sbjct: 2604 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaa 2546
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>dbj|AK072195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151K20, full
            insert sequence
          Length = 3262

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 602  atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaa 660
            ||||||||||||||| || ||||| |||||||  |||||| | || |||| ||||||||
Sbjct: 2605 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaa 2547
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>dbj|AK070157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046D01, full
            insert sequence
          Length = 3981

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 602  atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaa 660
            ||||||||||||||| || ||||| |||||||  |||||| | || |||| ||||||||
Sbjct: 2603 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaa 2545
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>dbj|AK065855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042G10, full
            insert sequence
          Length = 2473

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 602  atatcaaccaggaaccgattcagaagtgatgtgtccaccactagcaccagggggattaa 660
            ||||||||||||||| || ||||| |||||||  |||||| | || |||| ||||||||
Sbjct: 1829 atatcaaccaggaacagactcagaggtgatgtacccaccatttgccccagtgggattaa 1771
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>emb|AL080315.18|HSDJ6P5 Human DNA sequence from clone RP1-6P5 on chromosome 6 Contains a
             eukaryotic translation elongation factor 1 delta (guanine
             nucleotide exchange protein) (EEF1D) pseudogene and a
             ribosomal protein L21 (RPL21) pseudogene, complete
             sequence
          Length = 158980

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 339   tacatgttctccagtctatttg 360
             ||||||||||||||||||||||
Sbjct: 80019 tacatgttctccagtctatttg 79998
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>ref|XM_641940.1| Dictyostelium discoideum filamin/ABP280 repeat-containing protein
            (DDB0229956), partial mRNA
          Length = 4158

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 433  ataatgagattaatctgaaac 453
            |||||||||||||||||||||
Sbjct: 1661 ataatgagattaatctgaaac 1681
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>gb|AC009403.5| Homo sapiens PAC clone RP5-1015O24 from 7, complete sequence
          Length = 168418

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 442   ttaatctgaaacctacacttaagtcacag 470
             |||||||||||||| ||||||| ||||||
Sbjct: 19130 ttaatctgaaaccttcacttaaatcacag 19158
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>emb|AL662928.4| Human DNA sequence from clone RP11-92H11 on chromosome 1, complete
             sequence
          Length = 88568

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 407   ggggatccgtctctttttgtt 427
             |||||||||||||||||||||
Sbjct: 70901 ggggatccgtctctttttgtt 70921
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>gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178328

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   ggcacataaacattaaaaact 277
             |||||||||||||||||||||
Sbjct: 92346 ggcacataaacattaaaaact 92366
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>ref|NM_076622.3| Caenorhabditis elegans C15H9.7 (kynureninase) mRNA, complete cds
          Length = 1518

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 491 tgagcccatggaacttctcca 511
           |||||||||||||||||||||
Sbjct: 374 tgagcccatggaacttctcca 354
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 260      acataaacattaaaaactaga 280
                |||||||||||||||||||||
Sbjct: 16847337 acataaacattaaaaactaga 16847357
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>gb|AF303267.1|AF303267 Caenorhabditis elegans kynureninase (XG726) mRNA, complete cds
          Length = 1518

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 491 tgagcccatggaacttctcca 511
           |||||||||||||||||||||
Sbjct: 374 tgagcccatggaacttctcca 354
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>gb|AC092845.6| Homo sapiens BAC clone RP11-480J15 from 2, complete sequence
          Length = 85660

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 16   atcaatggatacctgggaggg 36
            |||||||||||||||||||||
Sbjct: 1935 atcaatggatacctgggaggg 1915
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>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete
             sequence
          Length = 147452

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   acataaacattaaaaactaga 280
             |||||||||||||||||||||
Sbjct: 31789 acataaacattaaaaactaga 31809
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>gb|AC068538.8| Homo sapiens BAC clone RP11-141G4 from 2, complete sequence
          Length = 173169

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     atcaatggatacctgggaggg 36
              |||||||||||||||||||||
Sbjct: 173104 atcaatggatacctgggaggg 173084
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>gb|U56965.1| Caenorhabditis elegans cosmid C15H9, complete sequence
          Length = 41752

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 491   tgagcccatggaacttctcca 511
             |||||||||||||||||||||
Sbjct: 19485 tgagcccatggaacttctcca 19505
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>gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.678_P_16, complete sequence
          Length = 156420

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 257    ggcacataaacattaaaaact 277
              |||||||||||||||||||||
Sbjct: 105046 ggcacataaacattaaaaact 105026
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 260      acataaacattaaaaactaga 280
                |||||||||||||||||||||
Sbjct: 16856377 acataaacattaaaaactaga 16856397
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>gb|AC124739.2| Mus musculus BAC clone RP23-344H4 from chromosome 12, complete sequence
          Length = 224632

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   ggaacttctccaagctcaca 519
             ||||||||||||||||||||
Sbjct: 81366 ggaacttctccaagctcaca 81385
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>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence
          Length = 233527

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    gtaaaaagaagagacaggaa 212
              ||||||||||||||||||||
Sbjct: 228327 gtaaaaagaagagacaggaa 228346
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>gb|AC127246.3| Mus musculus BAC clone RP24-424L20 from chromosome 16, complete
             sequence
          Length = 181475

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   gtaaaaagaagagacaggaa 212
             ||||||||||||||||||||
Sbjct: 74304 gtaaaaagaagagacaggaa 74285
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>ref|XM_738076.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000661.00.0)
            partial mRNA
          Length = 1788

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 418  tctttttgttggtctataat 437
            ||||||||||||||||||||
Sbjct: 1143 tctttttgttggtctataat 1124
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>gb|AC163723.3| Mus musculus BAC clone RP23-450O11 from chromosome 16, complete sequence
          Length = 181338

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    gtaaaaagaagagacaggaa 212
              ||||||||||||||||||||
Sbjct: 122502 gtaaaaagaagagacaggaa 122483
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>emb|X99688.1|HSTYL H.sapiens mRNA from TYL gene
          Length = 4307

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 648  ccagggggattaaaactgct 667
            ||||||||||||||||||||
Sbjct: 4277 ccagggggattaaaactgct 4296
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>gb|AC136504.23| Medicago truncatula clone mth2-13m6, complete sequence
          Length = 107180

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    acatgacacatctataaaat 56
             ||||||||||||||||||||
Sbjct: 60900 acatgacacatctataaaat 60919
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>gb|BC056513.1| Danio rerio La ribonucleoprotein domain family, member 1, mRNA
           (cDNA clone IMAGE:6788848), partial cds
          Length = 2500

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 ccagttcatccactgcacagagtt 325
           |||||||||||||||| |||||||
Sbjct: 656 ccagttcatccactgcccagagtt 679
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>emb|BX548163.15| Zebrafish DNA sequence from clone CH211-135J7 in linkage group 10,
             complete sequence
          Length = 132400

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   cacataaacattaaaaacta 278
             ||||||||||||||||||||
Sbjct: 98929 cacataaacattaaaaacta 98948
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>gb|AC154636.2| Mus musculus BAC clone RP23-302E1 from chromosome 12, complete sequence
          Length = 179631

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   ggaacttctccaagctcaca 519
             ||||||||||||||||||||
Sbjct: 14586 ggaacttctccaagctcaca 14567
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>dbj|AK083827.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130017D19 product:similar to
           ZINC FINGER PROTEIN 125 (FRAGMENT) [Mus musculus], full
           insert sequence
          Length = 3639

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 500 ggaacttctccaagctcaca 519
           ||||||||||||||||||||
Sbjct: 532 ggaacttctccaagctcaca 551
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>emb|BX890605.4| Mouse DNA sequence from clone RP23-29K12 on chromosome 2, complete
             sequence
          Length = 148620

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   agaagagacaggaaggcccc 218
             ||||||||||||||||||||
Sbjct: 87876 agaagagacaggaaggcccc 87895
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>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence
          Length = 196848

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 125   tacctggtcctaataaaaacaaat 148
             ||||||||||||||||||| ||||
Sbjct: 70952 tacctggtcctaataaaaaaaaat 70929
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>gb|AC006210.4| Homo sapiens X BAC GS1-309P15 (Genome Systems Human BAC Library)
             complete sequence
          Length = 185638

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    atgacacatctataaaatgtccaa 62
             ||||||||||||||| ||||||||
Sbjct: 65207 atgacacatctataatatgtccaa 65184
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>gb|AC140780.3| Mus musculus BAC clone RP24-500J16 from chromosome 5, complete sequence
          Length = 166260

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    ataaacattaaaaactagat 281
              ||||||||||||||||||||
Sbjct: 145979 ataaacattaaaaactagat 145960
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>emb|CT573324.3| CH251-10E6, complete sequence
          Length = 169419

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    atgacacatctataaaatgtccaa 62
             ||||||||||||||| ||||||||
Sbjct: 61717 atgacacatctataatatgtccaa 61694
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>emb|CR385063.6| Zebrafish DNA sequence from clone CH211-250G4 in linkage group 19,
             complete sequence
          Length = 72609

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    gagggacatgacacatctat 51
             ||||||||||||||||||||
Sbjct: 51430 gagggacatgacacatctat 51449
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>emb|CT572990.6| Mouse DNA sequence from clone RP24-393N9 on chromosome 12, complete
             sequence
          Length = 90243

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   ggaacttctccaagctcaca 519
             ||||||||||||||||||||
Sbjct: 73664 ggaacttctccaagctcaca 73683
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>gb|AC158366.5| Mus musculus BAC clone RP23-33N12 from chromosome 12, complete sequence
          Length = 212215

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   ggaacttctccaagctcaca 519
             ||||||||||||||||||||
Sbjct: 97646 ggaacttctccaagctcaca 97665
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>emb|AJ555625.1|PBE555625 Plasmodium berghei mRNA for metacaspase 1 (mc1 gene)
          Length = 1782

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 418  tctttttgttggtctataat 437
            ||||||||||||||||||||
Sbjct: 1146 tctttttgttggtctataat 1127
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>gb|AC150747.2| Mus musculus BAC clone RP23-249E15 from 5, complete sequence
          Length = 209364

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    ataaacattaaaaactagat 281
              ||||||||||||||||||||
Sbjct: 181515 ataaacattaaaaactagat 181534
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>emb|AL929494.8| Zebrafish DNA sequence from clone CH211-127N19 in linkage group 20,
             complete sequence
          Length = 98841

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   cacataaacattaaaaacta 278
             ||||||||||||||||||||
Sbjct: 68357 cacataaacattaaaaacta 68338


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,592,833
Number of Sequences: 3902068
Number of extensions: 6592833
Number of successful extensions: 122064
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121846
Number of HSP's gapped (non-prelim): 217
length of query: 693
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 670
effective length of database: 17,143,297,704
effective search space: 11486009461680
effective search space used: 11486009461680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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