ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472198.1| Oryza sativa (japonica cultivar-group), predic... 531 e-148
2dbj|AK103713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 531 e-148
3dbj|AK061349.1| Oryza sativa (japonica cultivar-group) cDNA clon... 531 e-148
4gb|AY109988.1| Zea mays CL3444_1 mRNA sequence 256 8e-65
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
6emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4,... 174 2e-40
7dbj|AP006685.1| Lotus japonicus genomic DNA, chromosome 1, clone... 66 2e-07
8dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone... 66 2e-07
9dbj|AP004471.1| Lotus japonicus genomic DNA, chromosome 3, clone... 66 2e-07
10ref|NM_213167.1| Danio rerio zgc:85787 (zgc:85787), mRNA 46 0.14
11gb|BC068386.1| Danio rerio zgc:85787, mRNA (cDNA clone MGC:85787... 46 0.14
12emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chr... 46 0.14
13gb|AC005191.1|AC005191 Homo sapiens PAC clone RP1-269O5 from Xq2... 46 0.14
14gb|AC102341.10| Mus musculus chromosome 8, clone RP23-214E1, com... 44 0.57
15gb|AC127682.4| Mus musculus BAC clone RP24-170O17 from 8, comple... 44 0.57
16gb|AC151909.5| Mus musculus BAC clone RP23-60H14 from chromosome... 44 0.57
17gb|AY704216.1| Mus musculus reelin (Reln) mRNA, partial cds 42 2.2
18ref|XM_359934.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.2
19ref|NM_011261.1| Mus musculus reelin (Reln), mRNA 42 2.2
20gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, com... 42 2.2
21gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, com... 42 2.2
22gb|AC006629.1| Caenorhabditis elegans cosmid F12E12, complete se... 42 2.2
23gb|U24703.1|MMU24703 Mus musculus reelin mRNA, complete cds 42 2.2
24ref|XM_477946.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
25ref|XM_506311.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 8.9
26gb|AC161425.3| Mus musculus BAC clone RP23-265K1 from chromosome... 40 8.9
27gb|AC121795.3| Mus musculus BAC clone RP23-421P13 from chromosom... 40 8.9
28gb|AC121950.2| Mus musculus BAC clone RP24-216M19 from 6, comple... 40 8.9
29emb|Z99758.8|HS800F24 Human DNA sequence from clone RP4-800F24 o... 40 8.9
30emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chr... 40 8.9
31emb|BX037236.1|CNS090W8 Single read from an extremity of a full-... 40 8.9
32emb|BX037235.1|CNS090W7 Single read from an extremity of a full-... 40 8.9
33emb|BX029240.1|CNS08UQ4 Single read from an extremity of a full-... 40 8.9
34emb|BX029239.1|CNS08UQ3 Single read from an extremity of a full-... 40 8.9
35emb|BX024216.1|CNS08QUK Single read from an extremity of a full-... 40 8.9
36gb|AY189120.1| Mus musculus nebulin (Neb) gene, complete sequence 40 8.9
37gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, com... 40 8.9
38gb|AC019026.12| Mus musculus chromosome 6 clone RP23-188E5 strai... 40 8.9
39gb|AC010536.8| Homo sapiens chromosome 16 clone RP11-278A23, com... 40 8.9
40gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nippo... 40 8.9
41gb|AC159254.2| Mus musculus BAC clone RP24-112C23 from chromosom... 40 8.9
42ref|NM_058991.1| Caenorhabditis elegans D1007.13 (D1007.13) mRNA... 40 8.9
43dbj|AK082689.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 8.9
44dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
45dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
46gb|AC010200.8| Homo sapiens 12 BAC RP11-575G13 (Roswell Park Can... 40 8.9
47gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.9
48dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
49emb|AL928570.14| Mouse DNA sequence from clone RP23-183A10 on ch... 40 8.9
50gb|AC157091.6| Mus musculus 6 BAC RP24-359O2 (Roswell Park Cance... 40 8.9
51ref|XM_311452.2| Anopheles gambiae str. PEST ENSANGP00000018551 ... 40 8.9
52gb|AC002482.1|AC002482 Human BAC clone CTA-208O3, complete sequence 40 8.9
53ref|XM_307095.2| Anopheles gambiae str. PEST ENSANGP00000012074 ... 40 8.9
54dbj|AK101282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
55dbj|AK063477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
56dbj|AK059613.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
57emb|CT571252.9| Mouse DNA sequence from clone RP24-91J7 on chrom... 40 8.9
58gb|AE016830.1| Enterococcus faecalis V583, complete genome 40 8.9
59gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
60gb|AC129294.3| Mus musculus BAC clone RP24-548E8 from 3, complet... 40 8.9
61emb|AL845355.11| Mouse DNA sequence from clone RP23-330F15 on ch... 40 8.9
62dbj|AB209049.1| Homo sapiens mRNA for nucleoside-diphosphate kin... 40 8.9 
>ref|XM_472198.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1044

 Score =  531 bits (268), Expect = e-148
 Identities = 415/464 (89%)
 Strand = Plus / Minus

                                                                        
Query: 187  tcctgcaacgccttcatcaagtatagcctgttgaaactctggccagcaaccccattgata 246
            |||||||| |||||||| ||||| |||||||||||| |||| |||||||||||||| |||
Sbjct: 1037 tcctgcaaggccttcattaagtagagcctgttgaaattctgaccagcaaccccattaata 978

                                                                        
Query: 247  tggttgcagtaactcgagatctgattggttacgagataaccctccaagcgggatggctca 306
            |||||||||||||| ||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 977  tggttgcagtaactggagatctgattggttacaagataaccctccaaacgtgacggctca 918

                                                                        
Query: 307  ggaagcggcttgaagatagggttggatggatcttcttctggcaacggctcctcgccagca 366
            |||| ||||||||| || || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 917  ggaatcggcttgaaaatgggattggatgggtcttcttctggcaatggctcctctccagca 858

                                                                        
Query: 367  gcctttctcgacatgttctcttgccttctcttttgaagccatgcctgttgctgtgactgt 426
            || ||||| | ||| |||||||||||||||||||| ||||||||||| ||||||||||| 
Sbjct: 857  gcttttcttgccatattctcttgccttctcttttggagccatgcctgctgctgtgactgc 798

                                                                        
Query: 427  tgccttcctaggttgcgatagtaatattggaacttgttttgctctgatgaaagaccatcc 486
            || |||   |  |||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 797  tgtcttgagacattgcgatagtaatattggaacttgttctgctctgatgaaagatcatcc 738

                                                                        
Query: 487  atgcacccaatcataaattctaggttcctttccataaagggtgcagtcgacaatttaaga 546
            ||||| ||||||| |||||| | |||||||||||| || || ||||| ||||||||||| 
Sbjct: 737  atgcagccaatcagaaattccaagttcctttccatgaatggagcagttgacaatttaagg 678

                                                                        
Query: 547  cggtcaaagtcacactgtgaaacaggtgactcaggttccagctccttcatgaaggcactg 606
            |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 677  cggtcaaaatcacactgtgaaacaggtgattcaggttccagctccgtcatgaaggcactg 618

                                                        
Query: 607  acaagcgccgagttggacactttaatcggtatctcctcgaaaat 650
            ||||| || |||||||| |||||||||||||||||||| |||||
Sbjct: 617  acaagtgcagagttggaaactttaatcggtatctcctcaaaaat 574
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>dbj|AK103713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137H02, full
            insert sequence
          Length = 1289

 Score =  531 bits (268), Expect = e-148
 Identities = 415/464 (89%)
 Strand = Plus / Minus

                                                                        
Query: 187  tcctgcaacgccttcatcaagtatagcctgttgaaactctggccagcaaccccattgata 246
            |||||||| |||||||| ||||| |||||||||||| |||| |||||||||||||| |||
Sbjct: 1121 tcctgcaaggccttcattaagtagagcctgttgaaattctgaccagcaaccccattaata 1062

                                                                        
Query: 247  tggttgcagtaactcgagatctgattggttacgagataaccctccaagcgggatggctca 306
            |||||||||||||| ||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 1061 tggttgcagtaactggagatctgattggttacaagataaccctccaaacgtgacggctca 1002

                                                                        
Query: 307  ggaagcggcttgaagatagggttggatggatcttcttctggcaacggctcctcgccagca 366
            |||| ||||||||| || || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1001 ggaatcggcttgaaaatgggattggatgggtcttcttctggcaatggctcctctccagca 942

                                                                        
Query: 367  gcctttctcgacatgttctcttgccttctcttttgaagccatgcctgttgctgtgactgt 426
            || ||||| | ||| |||||||||||||||||||| ||||||||||| ||||||||||| 
Sbjct: 941  gcttttcttgccatattctcttgccttctcttttggagccatgcctgctgctgtgactgc 882

                                                                        
Query: 427  tgccttcctaggttgcgatagtaatattggaacttgttttgctctgatgaaagaccatcc 486
            || |||   |  |||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 881  tgtcttgagacattgcgatagtaatattggaacttgttctgctctgatgaaagatcatcc 822

                                                                        
Query: 487  atgcacccaatcataaattctaggttcctttccataaagggtgcagtcgacaatttaaga 546
            ||||| ||||||| |||||| | |||||||||||| || || ||||| ||||||||||| 
Sbjct: 821  atgcagccaatcagaaattccaagttcctttccatgaatggagcagttgacaatttaagg 762

                                                                        
Query: 547  cggtcaaagtcacactgtgaaacaggtgactcaggttccagctccttcatgaaggcactg 606
            |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 761  cggtcaaaatcacactgtgaaacaggtgattcaggttccagctccgtcatgaaggcactg 702

                                                        
Query: 607  acaagcgccgagttggacactttaatcggtatctcctcgaaaat 650
            ||||| || |||||||| |||||||||||||||||||| |||||
Sbjct: 701  acaagtgcagagttggaaactttaatcggtatctcctcaaaaat 658
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>dbj|AK061349.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F07, full
           insert sequence
          Length = 1158

 Score =  531 bits (268), Expect = e-148
 Identities = 415/464 (89%)
 Strand = Plus / Minus

                                                                       
Query: 187 tcctgcaacgccttcatcaagtatagcctgttgaaactctggccagcaaccccattgata 246
           |||||||| |||||||| ||||| |||||||||||| |||| |||||||||||||| |||
Sbjct: 988 tcctgcaaggccttcattaagtagagcctgttgaaattctgaccagcaaccccattaata 929

                                                                       
Query: 247 tggttgcagtaactcgagatctgattggttacgagataaccctccaagcgggatggctca 306
           |||||||||||||| ||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 928 tggttgcagtaactggagatctgattggttacaagataaccctccaaacgtgacggctca 869

                                                                       
Query: 307 ggaagcggcttgaagatagggttggatggatcttcttctggcaacggctcctcgccagca 366
           |||| ||||||||| || || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 868 ggaatcggcttgaaaatgggattggatgggtcttcttctggcaatggctcctctccagca 809

                                                                       
Query: 367 gcctttctcgacatgttctcttgccttctcttttgaagccatgcctgttgctgtgactgt 426
           || ||||| | ||| |||||||||||||||||||| ||||||||||| ||||||||||| 
Sbjct: 808 gcttttcttgccatattctcttgccttctcttttggagccatgcctgctgctgtgactgc 749

                                                                       
Query: 427 tgccttcctaggttgcgatagtaatattggaacttgttttgctctgatgaaagaccatcc 486
           || |||   |  |||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 748 tgtcttgagacattgcgatagtaatattggaacttgttctgctctgatgaaagatcatcc 689

                                                                       
Query: 487 atgcacccaatcataaattctaggttcctttccataaagggtgcagtcgacaatttaaga 546
           ||||| ||||||| |||||| | |||||||||||| || || ||||| ||||||||||| 
Sbjct: 688 atgcagccaatcagaaattccaagttcctttccatgaatggagcagttgacaatttaagg 629

                                                                       
Query: 547 cggtcaaagtcacactgtgaaacaggtgactcaggttccagctccttcatgaaggcactg 606
           |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 628 cggtcaaaatcacactgtgaaacaggtgattcaggttccagctccgtcatgaaggcactg 569

                                                       
Query: 607 acaagcgccgagttggacactttaatcggtatctcctcgaaaat 650
           ||||| || |||||||| |||||||||||||||||||| |||||
Sbjct: 568 acaagtgcagagttggaaactttaatcggtatctcctcaaaaat 525
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>gb|AY109988.1| Zea mays CL3444_1 mRNA sequence
          Length = 1334

 Score =  256 bits (129), Expect = 8e-65
 Identities = 214/244 (87%)
 Strand = Plus / Plus

                                                                       
Query: 401 gaagccatgcctgttgctgtgactgttgccttcctaggttgcgatagtaatattggaact 460
           ||||||||||||| |||||||||||||| |||   || ||||| |  |||||||||||||
Sbjct: 430 gaagccatgcctgctgctgtgactgttgtcttgagagattgcggttataatattggaact 489

                                                                       
Query: 461 tgttttgctctgatgaaagaccatccatgcacccaatcataaattctaggttcctttcca 520
           |||| ||||||||||||||| |||||||||||||||||| |||||| | |||||||||||
Sbjct: 490 tgttctgctctgatgaaagatcatccatgcacccaatcagaaattccaagttcctttcca 549

                                                                       
Query: 521 taaagggtgcagtcgacaatttaagacggtcaaagtcacactgtgaaacaggtgactcag 580
           ||||     |||| ||||||||||| ||||| | ||||||||| | ||||||||| ||||
Sbjct: 550 taaannnnncagttgacaatttaagtcggtccaggtcacactgggtaacaggtgattcag 609

                                                                       
Query: 581 gttccagctccttcatgaaggcactgacaagcgccgagttggacactttaatcggtatct 640
           |||||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||
Sbjct: 610 gttccagctccttcatgaaggcactgacaagcgctgagttggaaacttttattggtatct 669

               
Query: 641 cctc 644
           ||||
Sbjct: 670 cctc 673



 Score =  170 bits (86), Expect = 4e-39
 Identities = 161/186 (86%)
 Strand = Plus / Plus

                                                                       
Query: 180 ctaatcttcctgcaacgccttcatcaagtatagcctgttgaaactctggccagcaacccc 239
           |||||| || ||||| |||||||||| ||||||||||| |||| |||| |||||||||||
Sbjct: 209 ctaatcctcatgcaaggccttcatcaggtatagcctgtcgaaattctgaccagcaacccc 268

                                                                       
Query: 240 attgatatggttgcagtaactcgagatctgattggttacgagataaccctccaagcggga 299
            ||||||||||||||||||||  |||||||||| ||||| ||||| |||||||| || ||
Sbjct: 269 gttgatatggttgcagtaactgcagatctgattagttactagatagccctccaatcgtga 328

                                                                       
Query: 300 tggctcaggaagcggcttgaagatagggttggatggatcttcttctggcaacggctcctc 359
            ||||||||||  ||||| || ||||| |||||||||||||||||||| |  ||||||||
Sbjct: 329 gggctcaggaataggcttaaatataggattggatggatcttcttctggtagtggctcctc 388

                 
Query: 360 gccagc 365
            |||||
Sbjct: 389 accagc 394
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  174 bits (88), Expect = 2e-40
 Identities = 139/156 (89%)
 Strand = Plus / Plus

                                                                            
Query: 237      cccattgatatggttgcagtaactcgagatctgattggttacgagataaccctccaagcg 296
                |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 18412019 cccattaatatggttgcagtaactggagatctgattggttacaagataaccctccaaacg 18412078

                                                                            
Query: 297      ggatggctcaggaagcggcttgaagatagggttggatggatcttcttctggcaacggctc 356
                 || |||||||||| ||||||||| || || |||||||| |||||||||||||| |||||
Sbjct: 18412079 tgacggctcaggaatcggcttgaaaatgggattggatgggtcttcttctggcaatggctc 18412138

                                                    
Query: 357      ctcgccagcagcctttctcgacatgttctcttgcct 392
                ||| |||||||| ||||| | ||| |||||||||||
Sbjct: 18412139 ctctccagcagcttttcttgccatattctcttgcct 18412174



 Score =  115 bits (58), Expect = 2e-22
 Identities = 94/106 (88%)
 Strand = Plus / Plus

                                                                            
Query: 459      cttgttttgctctgatgaaagaccatccatgcacccaatcataaattctaggttcctttc 518
                |||||| ||||||||||||||| |||||||||| ||||||| |||||| | |||||||||
Sbjct: 18412499 cttgttctgctctgatgaaagatcatccatgcagccaatcagaaattccaagttcctttc 18412558

                                                              
Query: 519      cataaagggtgcagtcgacaatttaagacggtcaaagtcacactgt 564
                ||| || || ||||| ||||||||||| |||||||| |||||||||
Sbjct: 18412559 catgaatggagcagttgacaatttaaggcggtcaaaatcacactgt 18412604



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                            
Query: 561      ctgtgaaacaggtgactcaggttccagctccttcatgaaggcactgacaagcgccgagtt 620
                ||||||||||||||| ||||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 18412695 ctgtgaaacaggtgattcaggttccagctccgtcatgaaggcactgacaagtgcagagtt 18412754

                             
Query: 621      ggacactttaatc 633
                ||| |||||||||
Sbjct: 18412755 ggaaactttaatc 18412767



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                            
Query: 390      ccttctcttttgaagccatgcctgttgctgtgactgttgccttcctaggttgcgatagta 449
                |||||||||||| ||||||||||| ||||||||||| || |||   |  |||||||||||
Sbjct: 18412339 ccttctcttttggagccatgcctgctgctgtgactgctgtcttgagacattgcgatagta 18412398

                           
Query: 450      atattggaact 460
                |||||||||||
Sbjct: 18412399 atattggaact 18412409



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 187      tcctgcaacgccttcatcaagtatagcctgttgaaactctggccagcaaccc 238
                |||||||| |||||||| ||||| |||||||||||| |||| ||||||||||
Sbjct: 18411595 tcctgcaaggccttcattaagtagagcctgttgaaattctgaccagcaaccc 18411646
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>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15,
              complete sequence
          Length = 133413

 Score =  174 bits (88), Expect = 2e-40
 Identities = 139/156 (89%)
 Strand = Plus / Plus

                                                                          
Query: 237    cccattgatatggttgcagtaactcgagatctgattggttacgagataaccctccaagcg 296
              |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 113942 cccattaatatggttgcagtaactggagatctgattggttacaagataaccctccaaacg 114001

                                                                          
Query: 297    ggatggctcaggaagcggcttgaagatagggttggatggatcttcttctggcaacggctc 356
               || |||||||||| ||||||||| || || |||||||| |||||||||||||| |||||
Sbjct: 114002 tgacggctcaggaatcggcttgaaaatgggattggatgggtcttcttctggcaatggctc 114061

                                                  
Query: 357    ctcgccagcagcctttctcgacatgttctcttgcct 392
              ||| |||||||| ||||| | ||| |||||||||||
Sbjct: 114062 ctctccagcagcttttcttgccatattctcttgcct 114097



 Score =  115 bits (58), Expect = 2e-22
 Identities = 94/106 (88%)
 Strand = Plus / Plus

                                                                          
Query: 459    cttgttttgctctgatgaaagaccatccatgcacccaatcataaattctaggttcctttc 518
              |||||| ||||||||||||||| |||||||||| ||||||| |||||| | |||||||||
Sbjct: 114422 cttgttctgctctgatgaaagatcatccatgcagccaatcagaaattccaagttcctttc 114481

                                                            
Query: 519    cataaagggtgcagtcgacaatttaagacggtcaaagtcacactgt 564
              ||| || || ||||| ||||||||||| |||||||| |||||||||
Sbjct: 114482 catgaatggagcagttgacaatttaaggcggtcaaaatcacactgt 114527



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                          
Query: 561    ctgtgaaacaggtgactcaggttccagctccttcatgaaggcactgacaagcgccgagtt 620
              ||||||||||||||| ||||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 114618 ctgtgaaacaggtgattcaggttccagctccgtcatgaaggcactgacaagtgcagagtt 114677

                           
Query: 621    ggacactttaatc 633
              ||| |||||||||
Sbjct: 114678 ggaaactttaatc 114690



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                          
Query: 390    ccttctcttttgaagccatgcctgttgctgtgactgttgccttcctaggttgcgatagta 449
              |||||||||||| ||||||||||| ||||||||||| || |||   |  |||||||||||
Sbjct: 114262 ccttctcttttggagccatgcctgctgctgtgactgctgtcttgagacattgcgatagta 114321

                         
Query: 450    atattggaact 460
              |||||||||||
Sbjct: 114322 atattggaact 114332



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                  
Query: 187    tcctgcaacgccttcatcaagtatagcctgttgaaactctggccagcaaccc 238
              |||||||| |||||||| ||||| |||||||||||| |||| ||||||||||
Sbjct: 113518 tcctgcaaggccttcattaagtagagcctgttgaaattctgaccagcaaccc 113569
to top
>dbj|AP006685.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45M12, TM0378b,
             complete sequence
          Length = 86433

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                         
Query: 288   ctccaagcgggatggctcaggaagcggcttgaagatagggttggatggatcttcttctgg 347
             |||||| || ||||||||||| || |||||||| || ||||| || |||||||| || ||
Sbjct: 76290 ctccaaccgtgatggctcaggtagtggcttgaaaatggggtttgaaggatcttcctcagg 76349

                                  
Query: 348   caacggctcctcgccagcagc 368
             ||| |||||||| ||||||||
Sbjct: 76350 caaaggctcctccccagcagc 76370
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>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055,
             complete sequence
          Length = 94516

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                         
Query: 288   ctccaagcgggatggctcaggaagcggcttgaagatagggttggatggatcttcttctgg 347
             |||||| || ||||||||||| || |||||||| || ||||| || |||||||| || ||
Sbjct: 50885 ctccaaccgtgatggctcaggtagtggcttgaaaatggggtttgaaggatcttcctcagg 50944

                                  
Query: 348   caacggctcctcgccagcagc 368
             ||| |||||||| ||||||||
Sbjct: 50945 caaaggctcctccccagcagc 50965
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>dbj|AP004471.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT15H09, TM0005,
             complete sequence
          Length = 97710

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                         
Query: 288   ctccaagcgggatggctcaggaagcggcttgaagatagggttggatggatcttcttctgg 347
             |||||| || ||||||||||| || |||||||| || ||||| || |||||||| || ||
Sbjct: 80049 ctccaaccgtgatggctcaggtagtggcttgaaaatggggtttgaaggatcttcctcagg 80108

                                  
Query: 348   caacggctcctcgccagcagc 368
             ||| |||||||| ||||||||
Sbjct: 80109 caaaggctcctccccagcagc 80129
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>ref|NM_213167.1| Danio rerio zgc:85787 (zgc:85787), mRNA
          Length = 3524

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 239 cattgatatggttgcagtaactc 261
           |||||||||||||||||||||||
Sbjct: 999 cattgatatggttgcagtaactc 977
to top
>gb|BC068386.1| Danio rerio zgc:85787, mRNA (cDNA clone MGC:85787 IMAGE:6961124),
           complete cds
          Length = 3524

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 239 cattgatatggttgcagtaactc 261
           |||||||||||||||||||||||
Sbjct: 999 cattgatatggttgcagtaactc 977
to top
>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete
              sequence
          Length = 189900

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 136    atacagtgttaagttaaaatctc 158
              |||||||||||||||||||||||
Sbjct: 122516 atacagtgttaagttaaaatctc 122538
to top
>gb|AC005191.1|AC005191 Homo sapiens PAC clone RP1-269O5 from Xq23, complete sequence
          Length = 185893

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 65    tatctcattttggcaaaacaaaa 87
             |||||||||||||||||||||||
Sbjct: 25044 tatctcattttggcaaaacaaaa 25022
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>gb|AC102341.10| Mus musculus chromosome 8, clone RP23-214E1, complete sequence
          Length = 187701

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 383    tctcttgccttctcttttgaagccatgcctgttg 416
              |||||||| ||||||||||||||||  |||||||
Sbjct: 138178 tctcttgcattctcttttgaagccagtcctgttg 138211
to top
>gb|AC127682.4| Mus musculus BAC clone RP24-170O17 from 8, complete sequence
          Length = 144298

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 383   tctcttgccttctcttttgaagccatgcctgttg 416
             |||||||| ||||||||||||||||  |||||||
Sbjct: 15319 tctcttgcattctcttttgaagccagtcctgttg 15286
to top
>gb|AC151909.5| Mus musculus BAC clone RP23-60H14 from chromosome 8, complete sequence
          Length = 208855

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 383   tctcttgccttctcttttgaagccatgcctgttg 416
             |||||||| ||||||||||||||||  |||||||
Sbjct: 78051 tctcttgcattctcttttgaagccagtcctgttg 78084
to top
>gb|AY704216.1| Mus musculus reelin (Reln) mRNA, partial cds
          Length = 2241

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  ttgcagtaactcgagatctga 270
            |||||||||||||||||||||
Sbjct: 1271 ttgcagtaactcgagatctga 1291
to top
>ref|XM_359934.1| Magnaporthe grisea 70-15 hypothetical protein (MG04843.4) partial
           mRNA
          Length = 2178

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 342 ttctggcaacggctcctcgcc 362
           |||||||||||||||||||||
Sbjct: 285 ttctggcaacggctcctcgcc 265
to top
>ref|NM_011261.1| Mus musculus reelin (Reln), mRNA
          Length = 11673

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  ttgcagtaactcgagatctga 270
            |||||||||||||||||||||
Sbjct: 4145 ttgcagtaactcgagatctga 4165
to top
>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 250    ttgcagtaactcgagatctga 270
              |||||||||||||||||||||
Sbjct: 211802 ttgcagtaactcgagatctga 211782
to top
>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   ttgcagtaactcgagatctga 270
             |||||||||||||||||||||
Sbjct: 53383 ttgcagtaactcgagatctga 53363
to top
>gb|AC006629.1| Caenorhabditis elegans cosmid F12E12, complete sequence
          Length = 27659

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 449   aatattggaacttgttttgct 469
             |||||||||||||||||||||
Sbjct: 24205 aatattggaacttgttttgct 24225
to top
>gb|U24703.1|MMU24703 Mus musculus reelin mRNA, complete cds
          Length = 11673

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  ttgcagtaactcgagatctga 270
            |||||||||||||||||||||
Sbjct: 4145 ttgcagtaactcgagatctga 4165
to top
>ref|XM_477946.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1421

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 383 tctcttgccttctcttttgaagcc 406
           ||||||||||||||||||| ||||
Sbjct: 802 tctcttgccttctcttttgcagcc 779
to top
>ref|XM_506311.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0027N13.110
           mRNA
          Length = 2157

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 383 tctcttgccttctcttttgaagcc 406
           ||||||||||||||||||| ||||
Sbjct: 798 tctcttgccttctcttttgcagcc 775
to top
>gb|AC161425.3| Mus musculus BAC clone RP23-265K1 from chromosome 3, complete sequence
          Length = 214631

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    atacagtgttaagttaaaat 155
              ||||||||||||||||||||
Sbjct: 156464 atacagtgttaagttaaaat 156483
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>gb|AC121795.3| Mus musculus BAC clone RP23-421P13 from chromosome 17, complete
             sequence
          Length = 204354

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 368   cctttctcgacatgttctcttgcc 391
             |||||||| |||||||||||||||
Sbjct: 78184 cctttctccacatgttctcttgcc 78207
to top
>gb|AC121950.2| Mus musculus BAC clone RP24-216M19 from 6, complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     acacaacctcaaaacaaatg 41
              ||||||||||||||||||||
Sbjct: 163637 acacaacctcaaaacaaatg 163618
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>emb|Z99758.8|HS800F24 Human DNA sequence from clone RP4-800F24 on chromosome 1q24 Contains
             part of the NME7 gene for protein expressed in
             non-metastatic cells 7 (nucleoside-diphosphate kinase) and
             a novel gene, complete sequence
          Length = 140788

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ggttgcagtaactcgagatc 267
             ||||||||||||||||||||
Sbjct: 95013 ggttgcagtaactcgagatc 95032
to top
>emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chromosome 1 Contains a novel
              gene, the 5' end of the CAMTA1 gene for calmodulin binding
              transcription activator 1, a ribosomal protein L37 (RPL37)
              pseudogene and a CpG island, complete sequence
          Length = 204394

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    tcctcgccagcagcctttct 374
              ||||||||||||||||||||
Sbjct: 172953 tcctcgccagcagcctttct 172934
to top
>emb|BX037236.1|CNS090W8 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA9CE02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1008

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 322 atagggttggatggatcttcttct 345
           |||||||||||| |||||||||||
Sbjct: 724 atagggttggatagatcttcttct 747
to top
>emb|BX037235.1|CNS090W7 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA9CE02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1044

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 322 atagggttggatggatcttcttct 345
           |||||||||||| |||||||||||
Sbjct: 481 atagggttggatagatcttcttct 458
to top
>emb|BX029240.1|CNS08UQ4 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA43CH02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 964

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 322 atagggttggatggatcttcttct 345
           |||||||||||| |||||||||||
Sbjct: 723 atagggttggatagatcttcttct 746
to top
>emb|BX029239.1|CNS08UQ3 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA43CH02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 958

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 322 atagggttggatggatcttcttct 345
           |||||||||||| |||||||||||
Sbjct: 481 atagggttggatagatcttcttct 458
to top
>emb|BX024216.1|CNS08QUK Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA36DG06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 288

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 322 atagggttggatggatcttcttct 345
           |||||||||||| |||||||||||
Sbjct: 246 atagggttggatagatcttcttct 223
to top
>gb|AY189120.1| Mus musculus nebulin (Neb) gene, complete sequence
          Length = 202402

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  aactcgagatctgattggtt 276
            ||||||||||||||||||||
Sbjct: 2143 aactcgagatctgattggtt 2162
to top
>gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, complete sequence
          Length = 181022

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   catgttctcttgccttctct 397
             ||||||||||||||||||||
Sbjct: 40046 catgttctcttgccttctct 40065
to top
>gb|AC019026.12| Mus musculus chromosome 6 clone RP23-188E5 strain C57BL6/J, complete
             sequence
          Length = 157996

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    acacaacctcaaaacaaatg 41
             ||||||||||||||||||||
Sbjct: 87423 acacaacctcaaaacaaatg 87404
to top
>gb|AC010536.8| Homo sapiens chromosome 16 clone RP11-278A23, complete sequence
          Length = 208236

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   gatacagtgttaagttaaaa 154
             ||||||||||||||||||||
Sbjct: 98897 gatacagtgttaagttaaaa 98878
to top
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0060A14, from chromosome 10, complete sequence
          Length = 151343

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aaaataggcaatgagcatgc 103
             ||||||||||||||||||||
Sbjct: 46470 aaaataggcaatgagcatgc 46489
to top
>gb|AC159254.2| Mus musculus BAC clone RP24-112C23 from chromosome 12, complete
             sequence
          Length = 163438

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   ttgaagccatgcctgttgct 418
             ||||||||||||||||||||
Sbjct: 21512 ttgaagccatgcctgttgct 21531
to top
>ref|NM_058991.1| Caenorhabditis elegans D1007.13 (D1007.13) mRNA, complete cds
          Length = 801

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 77  gcaaaacaaaataggcaatgagca 100
           |||||||||||| |||||||||||
Sbjct: 131 gcaaaacaaaattggcaatgagca 108
to top
>dbj|AK082689.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:C230087D09 product:reelin, full
           insert sequence
          Length = 2555

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 251 tgcagtaactcgagatctga 270
           ||||||||||||||||||||
Sbjct: 677 tgcagtaactcgagatctga 696
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       aaaataggcaatgagcatgc 103
                ||||||||||||||||||||
Sbjct: 13354093 aaaataggcaatgagcatgc 13354112
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 383      tctcttgccttctcttttgaagcc 406
                ||||||||||||||||||| ||||
Sbjct: 15816846 tctcttgccttctcttttgcagcc 15816869
to top
>gb|AC010200.8| Homo sapiens 12 BAC RP11-575G13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158149

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    ggttgcagtaactcgagatc 267
              ||||||||||||||||||||
Sbjct: 121941 ggttgcagtaactcgagatc 121960
to top
>gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-340A17, complete
             sequence
          Length = 228371

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 568   acaggtgactcaggttccag 587
             ||||||||||||||||||||
Sbjct: 44803 acaggtgactcaggttccag 44822
to top
>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0027N13
          Length = 179669

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 383   tctcttgccttctcttttgaagcc 406
             ||||||||||||||||||| ||||
Sbjct: 56360 tctcttgccttctcttttgcagcc 56383
to top
>emb|AL928570.14| Mouse DNA sequence from clone RP23-183A10 on chromosome X, complete
             sequence
          Length = 91550

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tcattttggcaaaacaaaat 88
             ||||||||||||||||||||
Sbjct: 41154 tcattttggcaaaacaaaat 41173
to top
>gb|AC157091.6| Mus musculus 6 BAC RP24-359O2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 206538

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    acacaacctcaaaacaaatg 41
             ||||||||||||||||||||
Sbjct: 95627 acacaacctcaaaacaaatg 95608
to top
>ref|XM_311452.2| Anopheles gambiae str. PEST ENSANGP00000018551
           (ENSANGG00000016062), partial mRNA
          Length = 1479

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 322 atagggttggatggatcttcttct 345
           |||||||||||| |||||||||||
Sbjct: 103 atagggttggatagatcttcttct 80
to top
>gb|AC002482.1|AC002482 Human BAC clone CTA-208O3, complete sequence
          Length = 107815

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    catgttctcttgccttctct 397
              ||||||||||||||||||||
Sbjct: 103145 catgttctcttgccttctct 103126
to top
>ref|XM_307095.2| Anopheles gambiae str. PEST ENSANGP00000012074
           (ENSANGG00000009585), partial mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 322 atagggttggatggatcttcttct 345
           |||||||||||| |||||||||||
Sbjct: 37  atagggttggatagatcttcttct 14
to top
>dbj|AK101282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033D05, full
           insert sequence
          Length = 1419

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 383 tctcttgccttctcttttgaagcc 406
           ||||||||||||||||||| ||||
Sbjct: 800 tctcttgccttctcttttgcagcc 777
to top
>dbj|AK063477.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-B04, full
           insert sequence
          Length = 2160

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 383 tctcttgccttctcttttgaagcc 406
           ||||||||||||||||||| ||||
Sbjct: 798 tctcttgccttctcttttgcagcc 775
to top
>dbj|AK059613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F11, full
           insert sequence
          Length = 762

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 383 tctcttgccttctcttttgaagcc 406
           ||||||||||||||||||| ||||
Sbjct: 119 tctcttgccttctcttttgcagcc 96
to top
>emb|CT571252.9| Mouse DNA sequence from clone RP24-91J7 on chromosome 12, complete
             sequence
          Length = 189925

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   ttgaagccatgcctgttgct 418
             ||||||||||||||||||||
Sbjct: 67359 ttgaagccatgcctgttgct 67378
to top
>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      tcattttggcaaaacaaaat 88
               ||||||||||||||||||||
Sbjct: 1987702 tcattttggcaaaacaaaat 1987683
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       aaaataggcaatgagcatgc 103
                ||||||||||||||||||||
Sbjct: 13361433 aaaataggcaatgagcatgc 13361452
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>gb|AC129294.3| Mus musculus BAC clone RP24-548E8 from 3, complete sequence
          Length = 159390

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   atacagtgttaagttaaaat 155
             ||||||||||||||||||||
Sbjct: 80655 atacagtgttaagttaaaat 80674
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>emb|AL845355.11| Mouse DNA sequence from clone RP23-330F15 on chromosome 2, complete
             sequence
          Length = 97155

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   aactcgagatctgattggtt 276
             ||||||||||||||||||||
Sbjct: 78132 aactcgagatctgattggtt 78113
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>dbj|AB209049.1| Homo sapiens mRNA for nucleoside-diphosphate kinase 7 isoform a
            variant protein
          Length = 4897

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 248  ggttgcagtaactcgagatc 267
            ||||||||||||||||||||
Sbjct: 1230 ggttgcagtaactcgagatc 1211


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,880,062
Number of Sequences: 3902068
Number of extensions: 5880062
Number of successful extensions: 103137
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102889
Number of HSP's gapped (non-prelim): 241
length of query: 650
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 627
effective length of database: 17,143,297,704
effective search space: 10748847660408
effective search space used: 10748847660408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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