ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LPXD_XANCP (Q8PAW3) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a... 30 6.9
2INSR_DROME (P09208) Insulin-like receptor precursor (EC 2.7.10.1... 30 9.0

>LPXD_XANCP (Q8PAW3) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 337

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
 Frame = +1

Query: 136 TTYVRVST-FEF*PMKQPKPEATAARDPLRSAREGSDLDALVA-----ERGHGCVVGAEE 297
           T + +++  F+  P++ P   A+A  DP  +    + +   V+       G GCV+GA  
Sbjct: 80  TAFAKIAALFDVAPVRAPGIHASAVIDPTATVSPTAHVGPFVSIGAGSRVGDGCVIGAGS 139

Query: 298 AVGRDEGEEDVADDRAE 348
            +    GE+ V DD  E
Sbjct: 140 II----GEDCVVDDGCE 152



to top

>INSR_DROME (P09208) Insulin-like receptor precursor (EC 2.7.10.1) (DIR) (DInr)|
           (dIRH) [Contains: Insulin-like receptor alpha subunit;
           Insulin-like receptor beta 1 subunit; Insulin-like
           receptor beta 2 subunit]
          Length = 2144

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 21/74 (28%), Positives = 37/74 (50%)
 Frame = -2

Query: 269 PRSATRASRSLPSRAERRGSLAAVASGFGCFMGQNSKVETRTYVVVSLCVCRRTK*SVRA 90
           PR  T+ S+S   + +    +AA A+   C +G    V  R  +++  C CR+   +V +
Sbjct: 5   PRGVTK-SKSKRGKIKMENDMAAAATTTACTLGHIC-VLCRQEMLLDTCCCRQAVEAVDS 62

Query: 89  HS*FQATYSASASS 48
            +  +  YS+S SS
Sbjct: 63  PASSEEAYSSSNSS 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,808,160
Number of Sequences: 219361
Number of extensions: 1343613
Number of successful extensions: 4217
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4212
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6769072002
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top