>RL34_TOBAC (P41098) 60S ribosomal protein L34|
          Length = 120

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           GK+IQGIPHLRPTEYKRSRLSRNRRTVNR YGGVLSG AVRERIIRAF
Sbjct: 48  GKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

>RL34_PEA (P40590) 60S ribosomal protein L34|
          Length = 120

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           GK+IQGIPHLRPTEYKRSRLSRNRRTVNR YGGVLSG AVRERIIRAF
Sbjct: 48  GKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95

>RL34_ARATH (Q42351) 60S ribosomal protein L34|
          Length = 120

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           GK+IQGIPHLRP+EYKRSRLSRNRRTVNR YGGVLSG AVRERIIRAF
Sbjct: 48  GKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

>RL34A_SCHPO (O42846) 60S ribosomal protein L34-A|
          Length = 112

 Score = 57.4 bits (137), Expect = 8e-09
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           G  +QGIP LRP E+  +RLS N++TV R YGG LS  AV++RI+RAF
Sbjct: 48  GVPLQGIPALRPREF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAF 93

>RL34B_SCHPO (Q9URT8) 60S ribosomal protein L34-B (60S ribosomal protein L34-2)|
          Length = 111

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           G  +QGIP LRP E+  +RLS N++ V R YGG LS  AV++RI+RAF
Sbjct: 48  GVPLQGIPALRPREF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAF 93

>RL34_AEDTR (Q9NB34) 60S ribosomal protein L34|
          Length = 138

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = -1

Query: 391 KKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           +K+ GI   RP+E  R R+ R  +TV R +GGVL  + +RERIIRAF
Sbjct: 48  EKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 92

>RL34_AEDAL (P45842) 60S ribosomal protein L34 (L31)|
          Length = 129

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = -1

Query: 391 KKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           +K+ GI   RP+E  R R+ R  +TV R +GGVL  + +RERIIRAF
Sbjct: 48  EKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 92

>RL34A_YEAST (P87262) 60S ribosomal protein L34-A|
          Length = 121

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 23/48 (47%), Positives = 31/48 (64%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           G  +QGI  LRP +Y  + +S+  +TV+R YGG      V+ERIIRAF
Sbjct: 48  GSALQGISTLRPRQY--ATVSKTHKTVSRAYGGSRCANCVKERIIRAF 93

>RL34B_YEAST (P40525) 60S ribosomal protein L34-B|
          Length = 121

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 22/48 (45%), Positives = 31/48 (64%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           G  +QGI  LRP +Y  + +S+  +TV+R YGG      V+ERI+RAF
Sbjct: 48  GSALQGISTLRPRQY--ATVSKTHKTVSRAYGGSRCANCVKERIVRAF 93

>RL34_ENCCU (Q8SSA2) 60S ribosomal protein L34|
          Length = 110

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = -1

Query: 376 IPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           I  +RP E+ R ++S  R  VNRPYG    G+ VRE+II AF
Sbjct: 53  IARMRPAEFSRQKVSARR--VNRPYGATTCGRCVREKIISAF 92

>RL34_ICTPU (Q90YT5) 60S ribosomal protein L34|
          Length = 116

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 19/46 (41%), Positives = 30/46 (65%)
 Frame = -1

Query: 388 KIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           +++GI  +RP    R  LS+ ++ V+R YGG +  + VR+RI RAF
Sbjct: 51  RLRGIRAVRPQVLMR--LSKTKKHVSRAYGGSMCAKCVRDRIKRAF 94

>RL34_BRARE (Q7ZWJ7) 60S ribosomal protein L34|
          Length = 116

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 19/46 (41%), Positives = 30/46 (65%)
 Frame = -1

Query: 388 KIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           +++GI  +RP    R  LS+ ++ V+R YGG +  + VR+RI RAF
Sbjct: 51  RLRGIRAVRPQVLMR--LSKTKKHVSRAYGGSMCAKCVRDRIKRAF 94

>RL34_HUMAN (P49207) 60S ribosomal protein L34|
          Length = 116

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 18/46 (39%), Positives = 30/46 (65%)
 Frame = -1

Query: 388 KIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           +++G+  +RP    R  LS+ ++ V+R YGG +  + VR+RI RAF
Sbjct: 51  RLRGVRAVRPKVLMR--LSKTKKHVSRAYGGSMCAKCVRDRIKRAF 94

>RL34_METTH (O26137) 50S ribosomal protein L34e|
          Length = 88

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRE 269
           GK + G+P  RP E ++  LS++++  NRPYGG       R+
Sbjct: 41  GKPLHGVPRGRPYEIRK--LSKSKKRPNRPYGGYYCSSCARK 80

>RL34_MOUSE (Q9D1R9) 60S ribosomal protein L34|
          Length = 116

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 18/46 (39%), Positives = 30/46 (65%)
 Frame = -1

Query: 388 KIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 251
           +++G+  +RP    R  LS+ ++ V+R YGG +  + VR+RI RAF
Sbjct: 51  RLRGVRAVRPKVLMR--LSKTQKHVSRAYGGSMCAKCVRDRIKRAF 94

>RL34_AERPE (P58026) 50S ribosomal protein L34e|
          Length = 95

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRA 254
           G+ + G+P  RP   +R  LS+  +   RPYGGVL    + E I  A
Sbjct: 46  GRPLGGVPRGRPPRVRR--LSKTAKRPERPYGGVLCSTCLAEMIFEA 90

>RL34_METJA (P54053) 50S ribosomal protein L34e|
          Length = 89

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 15/46 (32%), Positives = 28/46 (60%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIR 257
           G ++ G+P  RP E ++  L +++R   RPYGG L  + ++  +I+
Sbjct: 41  GAELHGVPRGRPVEIRK--LPKSQRRPERPYGGYLCPRCLKRLMIQ 84

>RL34_METKA (Q8TZB2) 50S ribosomal protein L34e|
          Length = 113

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -1

Query: 394 GKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERI 263
           G+++ G+   R  E K +  ++ R   NRPYGGVL  +  R+ I
Sbjct: 41  GRRLNGVMRGRNVELKNAPKTQKRP--NRPYGGVLCPECARKLI 82

>AGI_URTDI (P11218) Lectin/endochitinase precursor (EC 3.2.1.14) (Agglutinin)|
           (UDA)
          Length = 372

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3

Query: 311 PSLWWCSIWSGCSGEDHPCFPCGRAKDCE 225
           P+LW CSIW  C G+  P   CGR   CE
Sbjct: 36  PALWCCSIWGWC-GDSEPY--CGRT--CE 59

>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 10/35 (28%)
 Frame = -3

Query: 284  SGCSGEDHPCFP----------CGRAKDCEEGSED 210
            +GC+G +  C P          C   KDCE+GS++
Sbjct: 1051 AGCNGNEFQCHPDGNCVPDLWRCDGEKDCEDGSDE 1085

>LRP_CAEEL (Q04833) Low-density lipoprotein receptor-related protein precursor|
            (LRP)
          Length = 4753

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
 Frame = -3

Query: 278  CSGEDHPCFP----CGRAKDCEEGSEDP 207
            C G+D  C P    C    DC +GS++P
Sbjct: 3634 CGGDDAKCIPKLWYCDGEPDCRDGSDEP 3661

>BTKL_DROME (P08630) Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C)|
          Length = 786

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/42 (30%), Positives = 16/42 (38%)
 Frame = -3

Query: 311 PSLWWCSIWSGCSGEDHPCFPCGRAKDCEEGSEDPEDQGEAA 186
           P LW    WS C G     F C  A    E + +P +    A
Sbjct: 196 PGLWSGKKWSCCKGLSRTTFGCRAAAHWREANNNPSNGSSPA 237

>LRP2_RAT (P98158) Low-density lipoprotein receptor-related protein 2 precursor|
            (Megalin) (Glycoprotein 330) (gp330)
          Length = 4660

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
 Frame = -3

Query: 296  CSIWSGCSGEDHPCFP----CGRAKDCEEGSEDPE 204
            CS      G +  C P    C   KDC +GS++P+
Sbjct: 3514 CSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPD 3548

>AXUD1_MOUSE (P59054) Axin-1 up-regulated gene 1 protein (TGF-beta-induced|
           apoptosis protein 3) (TAIP-3)
          Length = 583

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -3

Query: 314 EPSLWWCSIWSGCSGEDHPCFPCGRAKDCEEGSEDPEDQGE 192
           +P    CS+       DH  FPCG    C EG E+P  + E
Sbjct: 246 DPETCSCSLAGIKCQMDHTSFPCG---CCREGCENPNGRVE 283

>CO7_PONPY (Q5RAD0) Complement component C7 precursor|
          Length = 843

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 320 NSEPSLWWCSIWSGCSGEDHPCFPCGRAKDCEE 222
           ++E +   C +W  C  E   C  C  A +CEE
Sbjct: 768 SAEKACGACPLWGKCDAESSKCV-CREASECEE 799

>CO7_HUMAN (P10643) Complement component C7 precursor|
          Length = 843

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 320 NSEPSLWWCSIWSGCSGEDHPCFPCGRAKDCEE 222
           ++E +   C +W  C  E   C  C  A +CEE
Sbjct: 768 SAEKACGACPLWGKCDAESSKCV-CREASECEE 799

>AXUD1_HUMAN (Q96S65) Axin-1 up-regulated gene 1 protein (TGF-beta-induced|
           apoptosis protein 3) (TAIP-3) (URAX1 protein)
          Length = 589

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -3

Query: 314 EPSLWWCSIWSGCSGEDHPCFPCGRAKDCEEGSEDP 207
           +P    CS+       DH  FPCG    C EG E+P
Sbjct: 246 DPETCSCSLAGIKCQMDHTAFPCG---CCREGCENP 278

>YM17_PARTE (P15618) Hypothetical 26.3 kDa protein (ORF17)|
          Length = 221

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 180 FDGCFSLVFWIFRTFFTIF 236
           F   F++VFW+F  F+T F
Sbjct: 172 FSAFFTIVFWLFLLFYTFF 190


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,284,186
Number of Sequences: 219361
Number of extensions: 991105
Number of successful extensions: 2270
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2261
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)