ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags38o23 |
|---|---|
| Clone Library Name | barley_pub |
>YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I| Length = 601 Score = 47.8 bits (112), Expect = 3e-05 Identities = 29/77 (37%), Positives = 43/77 (55%) Frame = -2 Query: 474 KDVLEILQAESKSKQVEILAKIYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGS 295 K +L++L +V I I+ A+ + E +D ++ VV+G RG LK LLGS Sbjct: 494 KYILKLLSKTVLEVEVNIEV-IHHEKAKHLIIEMIDYIEPSLVVMGSRGRSHLKGVLLGS 552 Query: 294 VSNYVVNNATCPVTVVR 244 SNY+VN ++ PV V R Sbjct: 553 FSNYLVNKSSVPVMVAR 569
>Y531_METJA (Q57951) Hypothetical protein MJ0531| Length = 170 Score = 47.4 bits (111), Expect = 3e-05 Identities = 26/79 (32%), Positives = 45/79 (56%) Frame = -2 Query: 474 KDVLEILQAESKSKQVEILAKIYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGS 295 ++ L+ ++ ++ V+I ++ G ++ E + K D +V+G G L+R LLGS Sbjct: 89 QEALKKVKKMAEEWGVKIHTEMLEGVPANEIVEFAEKKKADLIVMGTTGKTGLERILLGS 148 Query: 294 VSNYVVNNATCPVTVVRGP 238 V+ V+ NA CPV VV+ P Sbjct: 149 VAERVIKNAHCPVLVVKKP 167
>Y1654_SYNY3 (P72817) Hypothetical protein sll1654| Length = 157 Score = 47.0 bits (110), Expect = 4e-05 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 7/101 (6%) Frame = -2 Query: 528 LLEFMEMNVQAR----YGVNPDKDVLEILQA-ESKSKQVEILAKIYW--GDAREKLCEAV 370 LL +E N + +G++ + V ++L+A ++ Q I K G A +C+ Sbjct: 56 LLSVVEKNPPGQDHEAHGMDSPEAVAKLLEAAQAVFSQQGIATKTIEREGMASFTICDVA 115 Query: 369 DDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVV 247 D++ D +V+GCRGLG + SV+ V+N + CPV VV Sbjct: 116 DEVNADLIVMGCRGLGLTTEGVAESVTARVINLSPCPVLVV 156
>Y1101_SYNY3 (P72745) Hypothetical protein slr1101| Length = 108 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = -2 Query: 471 DVLEILQAESKSKQVEILAKIYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSV 292 D LE + ++ + +E A+ G + +C+ D +V+G RG L LLGSV Sbjct: 30 DTLEKRRQQALALDIECQAEQILGSPGKIICQRAKQDNSDIIVVGHRGRWGLSEILLGSV 89 Query: 291 SNYVVNNATCPVTVVRGPN 235 NYV ++A C V VV P+ Sbjct: 90 GNYVFHHAHCCVFVVPTPD 108
>YXIE_BACSU (P42297) Hypothetical protein yxiE precursor| Length = 148 Score = 44.7 bits (104), Expect = 2e-04 Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%) Frame = -2 Query: 474 KDVLEILQ-AESKSKQVEILAKIYW--GDAREKLCEAVDDLKVDSVVLGCRGLGPLKRAL 304 K+ L+IL+ A+ K+ + + A+ + G+ ++ + V +V+G RG+ LK + Sbjct: 69 KEGLKILENAKEKAAEKGVQAETIYANGEPAHEILNHAKEKGVSLIVVGSRGISGLKEMM 128 Query: 303 LGSVSNYVVNNATCPVTVVR 244 LGSVS+ V +TCPV +VR Sbjct: 129 LGSVSHKVSQLSTCPVLIVR 148
>YQA3_THEAQ (P74897) Hypothetical 14.6 kDa protein in QAH/OAS sulfhydrylase| 3'region Length = 137 Score = 42.7 bits (99), Expect = 8e-04 Identities = 24/58 (41%), Positives = 31/58 (53%) Frame = -2 Query: 417 AKIYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 A + G E + +A K D +V+G RGLG + LGS S VV A CPV +VR Sbjct: 80 ALLLQGRPAEAILQAAIGEKADLIVMGTRGLGAVGSLFLGSQSQKVVAEAPCPVLLVR 137
>Y1916_COXBU (P45680) Hypothetical protein CBU1916| Length = 146 Score = 41.2 bits (95), Expect = 0.002 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%) Frame = -2 Query: 498 ARYGVNPDKDVLEILQAESKSKQVEILAK---------IYWGDAREKLCEAVDDLKVDSV 346 A YGV DV ++L E+K + EI ++ + G A+ + E + VD + Sbjct: 50 AAYGVAAGVDVEDMLLEEAKKRMNEIASQLNISSDHQIVKVGPAKFLILEQAKNWGVDLI 109 Query: 345 VLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 ++G G ++ LLGS SN V++ A C V VR Sbjct: 110 IVGSHGRHGIQ-LLLGSTSNAVLHGAKCDVLAVR 142
>Y2028_MYCBO (P64922) Hypothetical protein Mb2028c| Length = 295 Score = 40.8 bits (94), Expect = 0.003 Identities = 20/38 (52%), Positives = 25/38 (65%) Frame = -2 Query: 360 KVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVV 247 + + VVLG G G L R LLGSVS+ +V A CPV V+ Sbjct: 110 EAEMVVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147 Score = 34.3 bits (77), Expect = 0.29 Identities = 19/35 (54%), Positives = 22/35 (62%) Frame = -2 Query: 348 VVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 VV+G G G L LLGSVSN V++ A PV V R Sbjct: 259 VVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
>Y2005_MYCTU (P64921) Hypothetical protein Rv2005c/MT2061| Length = 295 Score = 40.8 bits (94), Expect = 0.003 Identities = 20/38 (52%), Positives = 25/38 (65%) Frame = -2 Query: 360 KVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVV 247 + + VVLG G G L R LLGSVS+ +V A CPV V+ Sbjct: 110 EAEMVVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147 Score = 34.3 bits (77), Expect = 0.29 Identities = 19/35 (54%), Positives = 22/35 (62%) Frame = -2 Query: 348 VVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 VV+G G G L LLGSVSN V++ A PV V R Sbjct: 259 VVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
>Y2019_MYCBO (P0A5F8) Hypothetical protein Mb2019| Length = 317 Score = 39.7 bits (91), Expect = 0.007 Identities = 26/70 (37%), Positives = 37/70 (52%) Frame = -2 Query: 456 LQAESKSKQVEILAKIYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVV 277 L+A S + +I ++ G L +V VVLG RG G + ALLGSVS+ +V Sbjct: 91 LEASSSGRAAQITGEVLHGQIVPTLANI--SRQVAMVVLGYRGQGAVAGALLGSVSSSLV 148 Query: 276 NNATCPVTVV 247 +A PV V+ Sbjct: 149 RHAHGPVAVI 158 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/37 (48%), Positives = 20/37 (54%) Frame = -2 Query: 348 VVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVRGP 238 VV+G G G LGSVS VVN+ PV V R P Sbjct: 274 VVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVARIP 310
>Y1996_MYCTU (P0A5F7) Hypothetical protein Rv1996/MT2052| Length = 317 Score = 39.7 bits (91), Expect = 0.007 Identities = 26/70 (37%), Positives = 37/70 (52%) Frame = -2 Query: 456 LQAESKSKQVEILAKIYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVV 277 L+A S + +I ++ G L +V VVLG RG G + ALLGSVS+ +V Sbjct: 91 LEASSSGRAAQITGEVLHGQIVPTLANI--SRQVAMVVLGYRGQGAVAGALLGSVSSSLV 148 Query: 276 NNATCPVTVV 247 +A PV V+ Sbjct: 149 RHAHGPVAVI 158 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/37 (48%), Positives = 20/37 (54%) Frame = -2 Query: 348 VVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVRGP 238 VV+G G G LGSVS VVN+ PV V R P Sbjct: 274 VVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVARIP 310
>Y1388_SYNY3 (P74148) Hypothetical protein sll1388| Length = 154 Score = 39.3 bits (90), Expect = 0.009 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = -2 Query: 354 DSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 D VVLG RGL L LGSVS+YV+++ C V +V+ Sbjct: 117 DLVVLGRRGLKGLAEVFLGSVSSYVIHHVQCSVLIVQ 153
>USPG_SALTY (P67093) Universal stress protein G| Length = 142 Score = 36.2 bits (82), Expect = 0.077 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = -2 Query: 423 ILAKIYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 I + +G R+ + E ++L D VV+G R + LLGS ++ VV +AT PV VVR Sbjct: 84 IKTHVRFGSVRDVVNEMGEELDADVVVIGSRNPS-ITTHLLGSNASSVVRHATLPVLVVR 142
>USPG_SALTI (P67094) Universal stress protein G| Length = 142 Score = 36.2 bits (82), Expect = 0.077 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = -2 Query: 423 ILAKIYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 I + +G R+ + E ++L D VV+G R + LLGS ++ VV +AT PV VVR Sbjct: 84 IKTHVRFGSVRDVVNEMGEELDADVVVIGSRNPS-ITTHLLGSNASSVVRHATLPVLVVR 142
>USPG_SHIFL (Q83M07) Universal stress protein G| Length = 142 Score = 35.8 bits (81), Expect = 0.10 Identities = 20/56 (35%), Positives = 33/56 (58%) Frame = -2 Query: 411 IYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 + +G R+++ E ++L D VV+G R + LLGS ++ V+ +A PV VVR Sbjct: 88 VRFGSVRDEVNELAEELGADVVVIGSRNPS-ISTHLLGSNASSVIRHANLPVLVVR 142
>USPG_ECOLI (P39177) Universal stress protein G| Length = 142 Score = 35.8 bits (81), Expect = 0.10 Identities = 20/56 (35%), Positives = 33/56 (58%) Frame = -2 Query: 411 IYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 + +G R+++ E ++L D VV+G R + LLGS ++ V+ +A PV VVR Sbjct: 88 VRFGSVRDEVNELAEELGADVVVIGSRNPS-ISTHLLGSNASSVIRHANLPVLVVR 142
>USPG_ECO57 (Q8XBT3) Universal stress protein G| Length = 142 Score = 35.8 bits (81), Expect = 0.10 Identities = 20/56 (35%), Positives = 33/56 (58%) Frame = -2 Query: 411 IYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 + +G R+++ E ++L D VV+G R + LLGS ++ V+ +A PV VVR Sbjct: 88 VRFGSVRDEVNELAEELGADVVVIGSRNPS-ISTHLLGSNASSVIRHANLPVLVVR 142
>Y1154_METTH (O27222) Hypothetical protein MTH1154| Length = 146 Score = 35.4 bits (80), Expect = 0.13 Identities = 21/66 (31%), Positives = 37/66 (56%) Frame = -2 Query: 441 KSKQVEILAKIYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATC 262 ++ V A + GD +++ + ++ VD +V+G G + + LLGSVS VV+ A C Sbjct: 80 ENPNVSFRAVMREGDPADEIVKVAEEEDVDVIVMGT-GKSLVDKHLLGSVSEKVVHYAPC 138 Query: 261 PVTVVR 244 + +VR Sbjct: 139 TIHLVR 144
>USPG_ECOL6 (Q8FK07) Universal stress protein G| Length = 142 Score = 35.0 bits (79), Expect = 0.17 Identities = 20/56 (35%), Positives = 32/56 (57%) Frame = -2 Query: 411 IYWGDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 + +G R+++ E +L D VV+G R + LLGS ++ V+ +A PV VVR Sbjct: 88 VRFGSVRDEVNELAKELDADVVVIGSRNPS-ISTHLLGSNASSVIRHANLPVLVVR 142
>YB54_METTM (Q50777) Hypothetical 16.1 kDa protein in MTR region (ORF143)| Length = 143 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/53 (32%), Positives = 32/53 (60%) Frame = -2 Query: 402 GDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTVVR 244 G+ +++ + ++ VD +++G G + + LLGSVS VV+ A C + +VR Sbjct: 90 GNPADEIVKLAEEEDVDVIIMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHLVR 141
>USPF_SALTY (P67091) Universal stress protein F| Length = 144 Score = 31.2 bits (69), Expect = 2.5 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%) Frame = -2 Query: 465 LEILQAESKSKQVEILAK-----------IYWGDAREKLCEAVDDLKVDSVVLGCRGLGP 319 ++ L+AE+KS+ I+ K + G ++K+ E L D V++ Sbjct: 61 MDDLKAEAKSQLEAIIKKFNLPADRVQAHVAEGSPKDKILEMAKKLPADMVIIASHR-PD 119 Query: 318 LKRALLGSVSNYVVNNATCPVTVVR 244 + LLGS + VV +A C V VVR Sbjct: 120 ITTYLLGSNAAAVVRHAECSVLVVR 144
>USPF_SALTI (P67092) Universal stress protein F| Length = 144 Score = 31.2 bits (69), Expect = 2.5 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%) Frame = -2 Query: 465 LEILQAESKSKQVEILAK-----------IYWGDAREKLCEAVDDLKVDSVVLGCRGLGP 319 ++ L+AE+KS+ I+ K + G ++K+ E L D V++ Sbjct: 61 MDDLKAEAKSQLEAIIKKFNLPADRVQAHVAEGSPKDKILEMAKKLPADMVIIASHR-PD 119 Query: 318 LKRALLGSVSNYVVNNATCPVTVVR 244 + LLGS + VV +A C V VVR Sbjct: 120 ITTYLLGSNAAAVVRHAECSVLVVR 144
>USPE_HAEIN (P44195) Universal stress protein E homolog| Length = 309 Score = 30.8 bits (68), Expect = 3.3 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = -2 Query: 402 GDAREKLCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATC 262 G E + E +++ + V+LG G L ALLG+ + +V++ +C Sbjct: 251 GFPEEVIPEVAKEIEAELVILGTVGRTGLSAALLGNTAEHVISKLSC 297
>SYFA_SULTO (Q971D7) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 469 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -2 Query: 576 ASHKGLWKSTGSPLIPLLEFMEMNVQARYGVNPDKDVLEILQ 451 A KGL K G +IPL++ E + +NP+K +ILQ Sbjct: 106 AKRKGLVKIDGDTVIPLVKDYEAKEEKEALINPEKANKDILQ 147
>ARLY_BACHK (Q6HCP8) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 463 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +1 Query: 55 ITKEITEENTLNLHYKDSQESKKEKYHYSLK*HDLHL 165 +TKE E+ + L Y +E+K+ K H+S++ D+HL Sbjct: 51 VTKEEAEKIKIGLQYL-LEEAKQNKLHFSVEAEDIHL 86
>ARLY_BACC1 (Q72ZA4) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 462 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +1 Query: 55 ITKEITEENTLNLHYKDSQESKKEKYHYSLK*HDLHL 165 +TKE E+ + L Y +E+K+ K H+S++ D+HL Sbjct: 51 VTKEEAEKIKIGLQYL-LEEAKQNKLHFSVEAEDIHL 86
>ARLY_BACAN (Q81KV8) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 462 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +1 Query: 55 ITKEITEENTLNLHYKDSQESKKEKYHYSLK*HDLHL 165 +TKE E+ + L Y +E+K+ K H+S++ D+HL Sbjct: 51 VTKEEAEKIKIGLQYL-LEEAKQNKLHFSVEAEDIHL 86
>VIF_HV2NZ (P05901) Virion infectivity factor (Vif) (SOR protein) (Q protein)| Length = 215 Score = 29.6 bits (65), Expect = 7.2 Identities = 20/87 (22%), Positives = 35/87 (40%) Frame = -2 Query: 558 WKSTGSPLIPLLEFMEMNVQARYGVNPDKDVLEILQAESKSKQVEILAKIYWGDAREKLC 379 W + + PL E + +QA + + P+K L S S ++ + +W D Sbjct: 51 WWTCSRVIFPLKENSHLEIQAYWNLTPEKGWL-----SSHSVRITWYTEKFWTDVTPDCA 105 Query: 378 EAVDDLKVDSVVLGCRGLGPLKRALLG 298 D + S C G ++RA+ G Sbjct: 106 ----DTLIHSTYFSCFTAGEVRRAIRG 128
>PSBQ_CHLRE (P12852) Oxygen-evolving enhancer protein 3, chloroplast precursor| (OEE3) Length = 199 Score = 29.6 bits (65), Expect = 7.2 Identities = 20/74 (27%), Positives = 33/74 (44%) Frame = -2 Query: 501 QARYGVNPDKDVLEILQAESKSKQVEILAKIYWGDAREKLCEAVDDLKVDSVVLGCRGLG 322 QAR ++ K ++ +A + + K YW +ARE+L V L+ D L Sbjct: 89 QARASLDETKKRVKESEARIDADLDVFIQKSYWTEAREQLRRQVGTLRFDLNTLASTKEK 148 Query: 321 PLKRALLGSVSNYV 280 K+A LG ++ Sbjct: 149 EAKKAALGLRKEFI 162
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 337 LQGLRAVEKGTPWKRQQLCRQQCNLPRHSGARTKWI 230 L+G E+ W+++++ RQ N P H A + WI Sbjct: 563 LEGDGLAERWEEWQKEEMFRQDFNYPTHHPAVSGWI 598
>SYR_GLOVI (Q7NDF6) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 601 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 7/80 (8%) Frame = -2 Query: 564 GLWKSTGSPLIPLLEFMEMNVQARYGVNPDKDVLEILQAESKSKQVEILAKI-------Y 406 G W + GS L +L+F V + + +N + +++L K + +++L + Y Sbjct: 146 GRWAALGSSLERILQFAGYTVDSEFYINDAGNQMQLLGLSLKQRYLQVLGEAVELPDGGY 205 Query: 405 WGDAREKLCEAVDDLKVDSV 346 G ++L E + K DS+ Sbjct: 206 KGSYLKELAEQLVADKGDSL 225
>GYRB_BUCAP (P29435) DNA gyrase subunit B (EC 5.99.1.3)| Length = 803 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%) Frame = +1 Query: 28 TCKKQQKYSI-TKEITEENTLN----LHYKDSQESKKEKYHY 138 T K Q +Y I +K + E + LN +H KD++ + +EKYHY Sbjct: 177 TNKTQFQYEILSKRLRELSFLNSNILIHLKDNRTNLEEKYHY 218
>Y2346_MYCBO (P64996) Hypothetical protein Mb2346c| Length = 292 Score = 29.3 bits (64), Expect = 9.5 Identities = 13/45 (28%), Positives = 28/45 (62%) Frame = -2 Query: 384 LCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTV 250 L + V++L+ + +VLG G R L+GS ++ +++++ PV + Sbjct: 95 LLDVVEELEAEVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAI 139
>Y2319_MYCTU (P64995) Hypothetical protein Rv2319c/MT2382| Length = 292 Score = 29.3 bits (64), Expect = 9.5 Identities = 13/45 (28%), Positives = 28/45 (62%) Frame = -2 Query: 384 LCEAVDDLKVDSVVLGCRGLGPLKRALLGSVSNYVVNNATCPVTV 250 L + V++L+ + +VLG G R L+GS ++ +++++ PV + Sbjct: 95 LLDVVEELEAEVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAI 139 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,485,020 Number of Sequences: 219361 Number of extensions: 1875190 Number of successful extensions: 5658 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 5463 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5648 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
