ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39d22 |
|---|---|
| Clone Library Name | barley_pub |
>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)| (Ath-ExpAlpha-1.14) Length = 252 Score = 117 bits (293), Expect = 2e-26 Identities = 53/91 (58%), Positives = 64/91 (70%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 F +NG DYFE SI+SVSIKGS+TGW+ MSRNWG NWQSNA L GQ+LSF Sbjct: 162 FRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFS 221 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTFATNKQF 288 +T+TDG T F NV P+ W FGQ +++N QF Sbjct: 222 ITTTDGATRVFLNVVPSSWSFGQIYSSNVQF 252
>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)| (Ath-ExpAlpha-1.3) Length = 248 Score = 113 bits (283), Expect = 3e-25 Identities = 51/91 (56%), Positives = 64/91 (70%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FT+NGH YF + SV++KGSRT W MSRNWG NWQSN LL+GQ+LSF+ Sbjct: 158 FTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFK 217 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTFATNKQF 288 VT++DG+T+ N+APA W FGQTF T +QF Sbjct: 218 VTASDGRTVVSNNIAPASWSFGQTF-TGRQF 247
>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)| (Ath-ExpAlpha-1.2) Length = 250 Score = 113 bits (283), Expect = 3e-25 Identities = 51/85 (60%), Positives = 59/85 (69%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FT+NGH YF + S +KGSRTGW MSRNWG NWQSN+ L+GQSLSF+ Sbjct: 160 FTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFK 219 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTF 306 VT++DGQTI NVA AGW FGQTF Sbjct: 220 VTTSDGQTIVSNNVANAGWSFGQTF 244
>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)| (Ath-ExpAlpha-1.1) Length = 249 Score = 109 bits (273), Expect = 5e-24 Identities = 48/86 (55%), Positives = 60/86 (69%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FT+NGH YF + S +IKGSRT W MSRNWG NWQSN+ L+GQ+LSF+ Sbjct: 159 FTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFK 218 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTFA 303 VT++DG+T+ N APAGW +GQTFA Sbjct: 219 VTTSDGRTVVSFNAAPAGWSYGQTFA 244
>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)| (Ath-ExpAlpha-1.7) Length = 260 Score = 106 bits (265), Expect = 4e-23 Identities = 48/85 (56%), Positives = 59/85 (69%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FT+NGH YF I S+KGS+TGWM ++RNWG NWQSNA+L GQSLSF+ Sbjct: 169 FTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFR 228 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTF 306 VTS+D +T T N+AP+ W FGQTF Sbjct: 229 VTSSDRRTSTSWNIAPSNWQFGQTF 253
>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)| (AtEx14) (Ath-ExpAlpha-1.5) Length = 255 Score = 105 bits (263), Expect = 7e-23 Identities = 49/91 (53%), Positives = 59/91 (64%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FT+NGH YF + SVSIKG+ T W MSRNWG NWQSNA L GQ+LSF+ Sbjct: 162 FTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFK 221 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTFATNKQF 288 VT++DG+T+ N P W FGQT+ T KQF Sbjct: 222 VTTSDGRTVISNNATPRNWSFGQTY-TGKQF 251
>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)| (Ath-ExpAlpha-1.6) Length = 257 Score = 103 bits (256), Expect = 4e-22 Identities = 47/85 (55%), Positives = 57/85 (67%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FT+NGH YF I S+KGSRTGWM +SRNWG NWQSNA+L GQ+LSF+ Sbjct: 166 FTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFR 225 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTF 306 VT +D +T T N+ P+ W FGQTF Sbjct: 226 VTGSDRRTSTSWNMVPSNWQFGQTF 250
>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)| (Ath-ExpAlpha-1.9) Length = 262 Score = 102 bits (253), Expect = 1e-21 Identities = 49/86 (56%), Positives = 59/86 (68%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FTVNG YF I VS+KGS+T W+ MSRNWG NWQSNA+L GQSLSF+ Sbjct: 171 FTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFR 230 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTFA 303 VT++D ++ T NVAPA W FGQTF+ Sbjct: 231 VTASDRRSSTSWNVAPATWQFGQTFS 256
>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)| (Ath-ExpAlpha-1.4) Length = 255 Score = 102 bits (253), Expect = 1e-21 Identities = 49/91 (53%), Positives = 60/91 (65%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FT+NGH YF + SVS+KGSRT W MSRNWG NWQSN+ L+GQSLSF Sbjct: 164 FTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFV 223 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTFATNKQF 288 VT++D +++ NVAP W FGQT+ T QF Sbjct: 224 VTTSDRRSVVSFNVAPPTWSFGQTY-TGGQF 253
>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)| (Ath-ExpAlpha-1.11) Length = 253 Score = 100 bits (248), Expect = 4e-21 Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 1/86 (1%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRT-GWMPMSRNWGVNWQSNALLSGQSLSF 384 FT+NGH YF + +VSIKGS+T W MSRNWG NWQSN+ ++ QSLSF Sbjct: 163 FTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSF 222 Query: 383 QVTSTDGQTITFPNVAPAGWGFGQTF 306 QVT++DG+T+ +VAP+ W FGQT+ Sbjct: 223 QVTTSDGRTLVSNDVAPSNWQFGQTY 248
>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)| (Ath-ExpAlpha-1.10) Length = 258 Score = 99.8 bits (247), Expect = 5e-21 Identities = 44/86 (51%), Positives = 58/86 (67%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FT+NG YF + VS+KGS T W+ +SRNWG NWQSNALL GQSLSF+ Sbjct: 167 FTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFR 226 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTFA 303 V ++DG++ T N+AP+ W FGQT++ Sbjct: 227 VKTSDGRSSTSNNIAPSNWQFGQTYS 252
>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)| (Ath-ExpAlpha-1.12) Length = 255 Score = 99.0 bits (245), Expect = 8e-21 Identities = 47/86 (54%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTG-WMPMSRNWGVNWQSNALLSGQSLSF 384 FT+NG+ YF+ IR+VS+KGS+T W MSRNWG NWQSN L GQSLSF Sbjct: 165 FTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSF 224 Query: 383 QVTSTDGQTITFPNVAPAGWGFGQTF 306 QVT +DG+T+ +V P W FGQTF Sbjct: 225 QVTDSDGRTVVSYDVVPHDWQFGQTF 250
>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)| (Ath-ExpAlpha-1.8) Length = 257 Score = 97.8 bits (242), Expect = 2e-20 Identities = 45/85 (52%), Positives = 57/85 (67%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FT+NG YF +I + +KG+ T WM MSRNWG NWQSN++L GQSLSF+ Sbjct: 166 FTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFR 225 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTF 306 VTS+D ++ T N+APA W FGQTF Sbjct: 226 VTSSDRRSSTSWNIAPANWKFGQTF 250
>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)| (Ath-ExpAlpha-1.22) Length = 266 Score = 95.1 bits (235), Expect = 1e-19 Identities = 47/91 (51%), Positives = 56/91 (61%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 FTV+G F I +V IKGSRTGW+PM RNWG NW NA L Q+LSF+ Sbjct: 174 FTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFE 233 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTFATNKQF 288 VTS+D T+T NV+P W +GQTF KQF Sbjct: 234 VTSSDRSTVTSYNVSPKNWNYGQTF-EGKQF 263
>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)| (AtEx17) (Ath-ExpAlpha-1.13) Length = 255 Score = 88.2 bits (217), Expect = 1e-17 Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 1/92 (1%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTG-WMPMSRNWGVNWQSNALLSGQSLSF 384 FT+NG +YFE I V IKGS++ W MSRNWG N+QSN L+GQSLSF Sbjct: 164 FTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSF 223 Query: 383 QVTSTDGQTITFPNVAPAGWGFGQTFATNKQF 288 +V +DG NV P+ W FGQ+F +N F Sbjct: 224 KVQLSDGSIKAALNVVPSNWRFGQSFKSNVNF 255
>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)| (Expansin S2) (Ath-ExpAlpha-1.24) Length = 252 Score = 87.0 bits (214), Expect = 3e-17 Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 2/93 (2%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSR-TGWMPMSRNWGVNWQSNALLSGQSLSF 384 FT+ G F S+RSV+++GS+ W+ M+RNWG NWQS+ L GQ LSF Sbjct: 159 FTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSF 218 Query: 383 QVTSTDGQTITFPNVAPAGWGFGQTFAT-NKQF 288 +VT TD +T TF NV P+ W FGQTF++ +QF Sbjct: 219 KVTLTDSKTQTFLNVVPSSWWFGQTFSSRGRQF 251
>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)| (AtEx26) (Ath-ExpAlpha-1.16) Length = 279 Score = 87.0 bits (214), Expect = 3e-17 Identities = 39/85 (45%), Positives = 52/85 (61%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 F G+ YF I+ V +K ++TGW+ M +NWG NW ++ +L+GQ LSF+ Sbjct: 189 FETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFR 248 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTF 306 VT+TDG T F NV P WGFGQTF Sbjct: 249 VTTTDGITKDFWNVMPKNWGFGQTF 273
>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)| (AtEx22) (Ath-ExpAlpha-1.15) Length = 273 Score = 87.0 bits (214), Expect = 3e-17 Identities = 39/85 (45%), Positives = 52/85 (61%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 F G+ YF I+ V +KG++TGW+ M +NWG NW + +L+GQ LSF+ Sbjct: 183 FETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFR 242 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTF 306 VT++DG T F NV P WGFGQTF Sbjct: 243 VTTSDGITKDFWNVMPKNWGFGQTF 267
>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)| (Ath-ExpAlpha-1.17) Length = 269 Score = 84.7 bits (208), Expect = 2e-16 Identities = 37/85 (43%), Positives = 50/85 (58%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 F G+ YF I+ + +KG +TGW+ M +NWG NW + L+GQ +SF+ Sbjct: 179 FETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFR 238 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTF 306 VT++DG T F NV P WGFGQTF Sbjct: 239 VTTSDGVTKDFNNVMPNNWGFGQTF 263
>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)| (AtEx25) (Ath-ExpAlpha-1.18) Length = 276 Score = 84.7 bits (208), Expect = 2e-16 Identities = 37/85 (43%), Positives = 50/85 (58%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 F G+ YF I+ + +KG +TGW+ M +NWG NW + L+GQ +SF+ Sbjct: 186 FETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFR 245 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTF 306 VT++DG T F NV P WGFGQTF Sbjct: 246 VTTSDGVTKDFNNVMPNNWGFGQTF 270
>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)| (AtEx21) (Ath-ExpAlpha-1.20) Length = 256 Score = 82.0 bits (201), Expect = 1e-15 Identities = 38/69 (55%), Positives = 48/69 (69%) Frame = -1 Query: 494 IRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQVTSTDGQTITFPNVAPAGWGFG 315 I +VS KGS+T W+ MSR WG NW +N L+GQS+S +VT++DG T F +V PA WGFG Sbjct: 188 IIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFG 247 Query: 314 QTFATNKQF 288 QTF F Sbjct: 248 QTFDGKTNF 256
>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)| (Ath-ExpAlpha-1.26) Length = 262 Score = 78.6 bits (192), Expect = 1e-14 Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 1/92 (1%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 F G+ Y+ I+S+++KGSRT W+ MS NWG ++Q+ + L GQSLSF+ Sbjct: 170 FQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFR 229 Query: 380 VTS-TDGQTITFPNVAPAGWGFGQTFATNKQF 288 VTS T G+TI NVAPA W G+T+ + F Sbjct: 230 VTSYTTGETIYAWNVAPANWSGGKTYKSTANF 261
>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)| (Ath-ExpAlpha-1.23) Length = 256 Score = 77.8 bits (190), Expect = 2e-14 Identities = 39/91 (42%), Positives = 52/91 (57%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 F+++G +F + V +KG T W+PM+RNWG NW S+ L GQSLSF+ Sbjct: 165 FSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFE 224 Query: 380 VTSTDGQTITFPNVAPAGWGFGQTFATNKQF 288 VT G+TI +VAP W FG T+ KQF Sbjct: 225 VTLKGGKTIASYDVAPPYWRFGMTY-QGKQF 254
>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)| (Ath-ExpAlpha-1.25) Length = 257 Score = 74.7 bits (182), Expect = 2e-13 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 F G+ Y+ I+++++KGSRTGW+ MS NWG ++Q+ + L GQSLSF+ Sbjct: 165 FKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFR 224 Query: 380 VTS-TDGQTITFPNVAPAGWGFGQTFATNKQFS 285 +TS T QTI N APA W G+T+ + F+ Sbjct: 225 LTSYTTRQTIYAYNAAPASWSAGKTYQSKANFN 257
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 66.2 bits (160), Expect = 6e-11 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Frame = -1 Query: 560 FTVNGHDYFEXXXXXXXXXXXSIRSVSIKGSRTGWMPMSRNWGVNWQSNALLSGQSLSFQ 381 F + G+ +F ++R++ IKG+RT W+ M +NWG W + +L+GQ LSF+ Sbjct: 221 FEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFR 280 Query: 380 VTSTDGQTITFPNVAPAGWGF-GQTF 306 +T++DG F +V P W GQ+F Sbjct: 281 LTTSDGVMKEFIDVTPPDWKCNGQSF 306
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 40.8 bits (94), Expect = 0.003 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Frame = -1 Query: 458 WMPMSRNWGVNWQSNALLSGQS-LSFQVTSTD-GQTITFPNVAPAGWGFGQTFATNKQF 288 W+ MS++WG W+ + ++ LS +VTS + G+T+ NV PA W G + +N F Sbjct: 215 WLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273
>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea| m I) Length = 269 Score = 37.7 bits (86), Expect = 0.023 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -1 Query: 458 WMPMSRNWGVNWQSNA--LLSGQSLSFQVTSTDGQTITFPNVAPAGWGFGQTFATNKQF 288 W PM +WG W+ + L G S ++TS G+ + +V PA W + +N QF Sbjct: 211 WKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAVYTSNVQF 268
>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)| (Fragment) Length = 191 Score = 37.4 bits (85), Expect = 0.029 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -1 Query: 458 WMPMSRNWGVNWQSNA--LLSGQSLSFQVTSTDGQTITFPNVAPAGWGFGQTFATNKQF 288 W PM +WG W+ + L G S ++TS G+ + ++ PA W + +N QF Sbjct: 133 WKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 190
>EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXPL3)| (Ath-ExpBeta-2.3) Length = 263 Score = 36.2 bits (82), Expect = 0.066 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = -1 Query: 458 WMPMSRNWGVNWQSNALLSGQSLSFQVTST---DGQTITFPNVAPAGWGFGQTFATNKQF 288 W MSR+ G W ++ + +G +L F+ T T DG+T+ V PA W G+ + Q Sbjct: 189 WSYMSRSHGAVWATDKVPTG-ALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGVQI 247 Query: 287 S 285 + Sbjct: 248 T 248
>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)| (Ath-ExpBeta-1.6) Length = 264 Score = 32.7 bits (73), Expect = 0.73 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = -1 Query: 458 WMPMSRNWGVNW-QSNALLSGQSLSFQVTSTDGQTITFPNVAPAGWGFGQTFATNKQFS 285 W+ M WG NW L G T + G+T++ +V P W T+++ FS Sbjct: 203 WLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLNFS 261
>TOM40_DROME (Q9U4L6) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) (Male sterile protein 15) Length = 344 Score = 32.3 bits (72), Expect = 0.95 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = -1 Query: 410 LLSGQSLSFQVTSTDGQTITFPNVAPAGWGFGQTFATNKQFS 285 L G S FQV+ TI NV P+G+ FG T+ K+FS Sbjct: 85 LNKGLSNHFQVS----HTINMSNVVPSGYRFGATYVGTKEFS 122
>EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXPL1)| (Ath-ExpBeta-2.1) Length = 265 Score = 30.8 bits (68), Expect = 2.8 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = -1 Query: 473 GSRTGWMPMSRNWGVNWQSNALLSGQSLSFQVTST---DGQTITFPNVAPAGWGFGQTFA 303 GS W M+R+ G W ++ + +G ++ F+ T DG+ I +V P+ W G+ + Sbjct: 185 GSSPNWGYMTRSHGAVWVTDKVPTG-AIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYD 243 Query: 302 TNKQFS 285 Q + Sbjct: 244 AGVQIT 249
>SWR1_USTMA (Q4P328) Helicase SWR1 (EC 3.6.1.-)| Length = 1830 Score = 30.8 bits (68), Expect = 2.8 Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Frame = +3 Query: 477 DGHRPD-GTHAADVADEHELE 536 DG RPD G HAAD D HE+E Sbjct: 1778 DGARPDNGAHAADALDAHEIE 1798
>EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXPL2)| (Ath-ExpBeta-2.2) Length = 265 Score = 30.4 bits (67), Expect = 3.6 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -1 Query: 458 WMPMSRNWGVNWQSNALLSGQSLSFQVTST---DGQTITFPNVAPAGWGFGQTFATNKQF 288 W M+R+ G W ++ + +G +L F+ T DG+ + V PA W G+++ Q Sbjct: 190 WSYMTRSHGAVWVTDKVPNG-ALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDAGVQI 248 Query: 287 S 285 + Sbjct: 249 T 249
>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)| (Ath-ExpBeta-1.5) Length = 271 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = -1 Query: 458 WMPMSRNWGVNW-QSNALLSGQSLSFQVTSTDGQTITFPNVAPAGWGFGQTFATNKQFS 285 W+ M WG NW L G T ++ +T++ +V P+ W T+ + FS Sbjct: 210 WISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNFS 268
>FLAA_AQUAE (O67803) Flagellin| Length = 518 Score = 29.6 bits (65), Expect = 6.1 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = -1 Query: 440 NWGVNWQSNALLSGQSLSFQVTSTDGQTITFPNVAPAGWGFGQT 309 N G + ++ SG SL+F T TDG +ITF ++ G+ F T Sbjct: 190 NIGTTNTNYSVASGDSLAF--TFTDGTSITFNSLNQLGYDFNNT 231
>VP2_CAVCI (P69485) Protein VP2| Length = 216 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 92 GRRAKCMDD*HITHTTPRPEKISRRRCRQMIEYYASITDQEIPYTPKERTG 244 G+RAK D H + TP +R++ + + + + D+E +TP E G Sbjct: 132 GKRAKRKLDYHYSQPTP-----NRKKVYKTVRWQDELADREADFTPSEEDG 177
>VP2_CAVC1 (P69484) Protein VP2| Length = 216 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 92 GRRAKCMDD*HITHTTPRPEKISRRRCRQMIEYYASITDQEIPYTPKERTG 244 G+RAK D H + TP +R++ + + + + D+E +TP E G Sbjct: 132 GKRAKRKLDYHYSQPTP-----NRKKVYKTVRWQDELADREADFTPSEEDG 177
>VP2_CAV26 (P54092) Protein VP2| Length = 216 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 92 GRRAKCMDD*HITHTTPRPEKISRRRCRQMIEYYASITDQEIPYTPKERTG 244 G+RAK D H + TP +R++ + + + + D+E +TP E G Sbjct: 132 GKRAKRKLDYHYSQPTP-----NRKKVYKTVRWQDELADREADFTPSEEDG 177
>Y2306_MYCTU (Q50659) Hypothetical protein Rv2306c/MT2363 precursor| Length = 208 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 4/30 (13%) Frame = -3 Query: 405 QRAEPLVPGHQHRRPD----DHLPQRRSRR 328 +RA+ V H RRPD DHLPQR S R Sbjct: 59 RRAQRGVDEHPWRRPDERPNDHLPQRNSER 88
>ILVD1_ACIAD (Q6FCR9) Dihydroxy-acid dehydratase 1 (EC 4.2.1.9) (DAD 1)| Length = 609 Score = 29.3 bits (64), Expect = 8.0 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = -2 Query: 118 IIHAFGSASELESTFTMDNMQKVSSNL 38 ++H +ASE E FTMD++ ++S N+ Sbjct: 282 VLHLLAAASEAEVDFTMDDIDRLSRNV 308
>VP2_CAV82 (P54093) Protein VP2| Length = 216 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 92 GRRAKCMDD*HITHTTPRPEKISRRRCRQMIEYYASITDQEIPYTPKERTG 244 G+RAK D H + TP +R++ + + + + D+E +TP E G Sbjct: 132 GKRAKRKLDYHYSQPTP-----NRKKVYKTVRWKDELADREADFTPSEEDG 177 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,209,306 Number of Sequences: 219361 Number of extensions: 1460057 Number of successful extensions: 4245 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 4139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4234 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
