ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39d21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467229.1| Oryza sativa (japonica cultivar-group), mRNA 502 e-139
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 502 e-139
3dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic D... 502 e-139
4dbj|AK072634.1| Oryza sativa (japonica cultivar-group) cDNA clon... 502 e-139
5dbj|AK063776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
7dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
8ref|NM_197733.1| Oryza sativa (japonica cultivar-group) hypothet... 46 0.100
9tpg|BK005031.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 46 0.100
10gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 46 0.100
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.100
12dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.100
13dbj|AK119644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.100
14dbj|AK106282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.100
15dbj|AK070091.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.100
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.100
17ref|XM_365502.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.39
18ref|XM_864628.1| PREDICTED: Bos taurus similar to Adapter-relate... 42 1.6
19ref|XM_535479.2| PREDICTED: Canis familiaris similar to Adapter-... 42 1.6
20ref|NM_112914.3| Arabidopsis thaliana structural constituent of ... 40 6.2
21gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
22gb|BT000934.1| Arabidopsis thaliana clone C105254 unknown protei... 40 6.2
23gb|AY090951.1| Arabidopsis thaliana At3g20230 mRNA sequence 40 6.2
24gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 6.2
25gb|AC154531.2| Mus musculus BAC clone RP23-468B10 from chromosom... 40 6.2
26ref|XM_392550.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 6.2
27dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
28emb|BX824415.1|CNS0A6QL Arabidopsis thaliana Full-length cDNA Co... 40 6.2
29emb|BX825691.1|CNS0A6FK Arabidopsis thaliana Full-length cDNA Co... 40 6.2
30emb|BX826252.1|CNS0A6AH Arabidopsis thaliana Full-length cDNA Co... 40 6.2
31emb|BX825936.1|CNS0A4UE Arabidopsis thaliana Full-length cDNA Co... 40 6.2
32gb|AY086535.1| Arabidopsis thaliana clone 256294 mRNA, complete ... 40 6.2
33dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.2
34dbj|AB119059.1| Nannochloris bacillaris NbftsZ2 gene for plastid... 40 6.2
35dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 6.2
36emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.2
37gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 6.2 
>ref|XM_467229.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 980

 Score =  502 bits (253), Expect = e-139
 Identities = 321/344 (93%)
 Strand = Plus / Minus

                                                                       
Query: 75  gaacttgcctatgcaaagatgatgccatactccttaatggtgtcgatgacaatcccgagc 134
           |||||||||||  |||| || ||||| | ||||||||||||||||||||| || || |||
Sbjct: 594 gaacttgcctaaacaaatataatgccgtgctccttaatggtgtcgatgacgatgccaagc 535

                                                                       
Query: 135 ttcccctcgatcctctcgttcttcttgggctcgtacgccatggcgaagacgtcggcgtcc 194
           ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 534 ttcccctcgatcctctcgttcttcttgggctcgtaggacatggcgaagacgtcggcgtcc 475

                                                                       
Query: 195 atggacctctcggntatgagacggccgatggtcctgcaggcgttgtcgtctatgagggac 254
           |||||||||||||  ||||| ||||||||||||||||||||||||||||| | |||||| 
Sbjct: 474 atggacctctcggcgatgaggcggccgatggtcctgcaggcgttgtcgtcgacgagggag 415

                                                                       
Query: 255 ggcagcgtggtcctgaggtccttggcgttggtggtggcgacggcgataaccttgctggtg 314
           ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 414 ggcagcgtggtcctgaggtccttggcgttggtgctggcgacggagatgaccttgctggtg 355

                                                                       
Query: 315 ccccggtgcatgaccttggcgtggacgaagcgcttggagaagaagacgttgagcaggaac 374
           |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 cccctgtgcacgaccttggcgtggacgaagcgcttggagaagaagacgttgagcaggaac 295

                                                       
Query: 375 gggcgcatgtacatgtccgtgcgctgcttccacgacttgcggtt 418
           || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ggccgcatgtacatgtccgtgcgctgcttccacgacttgcggtt 251
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  502 bits (253), Expect = e-139
 Identities = 321/344 (93%)
 Strand = Plus / Plus

                                                                            
Query: 75       gaacttgcctatgcaaagatgatgccatactccttaatggtgtcgatgacaatcccgagc 134
                |||||||||||  |||| || ||||| | ||||||||||||||||||||| || || |||
Sbjct: 28309579 gaacttgcctaaacaaatataatgccgtgctccttaatggtgtcgatgacgatgccaagc 28309638

                                                                            
Query: 135      ttcccctcgatcctctcgttcttcttgggctcgtacgccatggcgaagacgtcggcgtcc 194
                ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 28309639 ttcccctcgatcctctcgttcttcttgggctcgtaggacatggcgaagacgtcggcgtcc 28309698

                                                                            
Query: 195      atggacctctcggntatgagacggccgatggtcctgcaggcgttgtcgtctatgagggac 254
                |||||||||||||  ||||| ||||||||||||||||||||||||||||| | |||||| 
Sbjct: 28309699 atggacctctcggcgatgaggcggccgatggtcctgcaggcgttgtcgtcgacgagggag 28309758

                                                                            
Query: 255      ggcagcgtggtcctgaggtccttggcgttggtggtggcgacggcgataaccttgctggtg 314
                ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 28309759 ggcagcgtggtcctgaggtccttggcgttggtgctggcgacggagatgaccttgctggtg 28309818

                                                                            
Query: 315      ccccggtgcatgaccttggcgtggacgaagcgcttggagaagaagacgttgagcaggaac 374
                |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28309819 cccctgtgcacgaccttggcgtggacgaagcgcttggagaagaagacgttgagcaggaac 28309878

                                                            
Query: 375      gggcgcatgtacatgtccgtgcgctgcttccacgacttgcggtt 418
                || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 28309879 ggccgcatgtacatgtccgtgcgctgcttccacgacttgcggtt 28309922
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>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1743_B12
          Length = 175645

 Score =  502 bits (253), Expect = e-139
 Identities = 321/344 (93%)
 Strand = Plus / Plus

                                                                          
Query: 75     gaacttgcctatgcaaagatgatgccatactccttaatggtgtcgatgacaatcccgagc 134
              |||||||||||  |||| || ||||| | ||||||||||||||||||||| || || |||
Sbjct: 101336 gaacttgcctaaacaaatataatgccgtgctccttaatggtgtcgatgacgatgccaagc 101395

                                                                          
Query: 135    ttcccctcgatcctctcgttcttcttgggctcgtacgccatggcgaagacgtcggcgtcc 194
              ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 101396 ttcccctcgatcctctcgttcttcttgggctcgtaggacatggcgaagacgtcggcgtcc 101455

                                                                          
Query: 195    atggacctctcggntatgagacggccgatggtcctgcaggcgttgtcgtctatgagggac 254
              |||||||||||||  ||||| ||||||||||||||||||||||||||||| | |||||| 
Sbjct: 101456 atggacctctcggcgatgaggcggccgatggtcctgcaggcgttgtcgtcgacgagggag 101515

                                                                          
Query: 255    ggcagcgtggtcctgaggtccttggcgttggtggtggcgacggcgataaccttgctggtg 314
              ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 101516 ggcagcgtggtcctgaggtccttggcgttggtgctggcgacggagatgaccttgctggtg 101575

                                                                          
Query: 315    ccccggtgcatgaccttggcgtggacgaagcgcttggagaagaagacgttgagcaggaac 374
              |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101576 cccctgtgcacgaccttggcgtggacgaagcgcttggagaagaagacgttgagcaggaac 101635

                                                          
Query: 375    gggcgcatgtacatgtccgtgcgctgcttccacgacttgcggtt 418
              || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 101636 ggccgcatgtacatgtccgtgcgctgcttccacgacttgcggtt 101679
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>dbj|AK072634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132I06, full
           insert sequence
          Length = 979

 Score =  502 bits (253), Expect = e-139
 Identities = 321/344 (93%)
 Strand = Plus / Minus

                                                                       
Query: 75  gaacttgcctatgcaaagatgatgccatactccttaatggtgtcgatgacaatcccgagc 134
           |||||||||||  |||| || ||||| | ||||||||||||||||||||| || || |||
Sbjct: 593 gaacttgcctaaacaaatataatgccgtgctccttaatggtgtcgatgacgatgccaagc 534

                                                                       
Query: 135 ttcccctcgatcctctcgttcttcttgggctcgtacgccatggcgaagacgtcggcgtcc 194
           ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 533 ttcccctcgatcctctcgttcttcttgggctcgtaggacatggcgaagacgtcggcgtcc 474

                                                                       
Query: 195 atggacctctcggntatgagacggccgatggtcctgcaggcgttgtcgtctatgagggac 254
           |||||||||||||  ||||| ||||||||||||||||||||||||||||| | |||||| 
Sbjct: 473 atggacctctcggcgatgaggcggccgatggtcctgcaggcgttgtcgtcgacgagggag 414

                                                                       
Query: 255 ggcagcgtggtcctgaggtccttggcgttggtggtggcgacggcgataaccttgctggtg 314
           ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 413 ggcagcgtggtcctgaggtccttggcgttggtgctggcgacggagatgaccttgctggtg 354

                                                                       
Query: 315 ccccggtgcatgaccttggcgtggacgaagcgcttggagaagaagacgttgagcaggaac 374
           |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cccctgtgcacgaccttggcgtggacgaagcgcttggagaagaagacgttgagcaggaac 294

                                                       
Query: 375 gggcgcatgtacatgtccgtgcgctgcttccacgacttgcggtt 418
           || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ggccgcatgtacatgtccgtgcgctgcttccacgacttgcggtt 250
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>dbj|AK063776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-D02, full
           insert sequence
          Length = 496

 Score =  238 bits (120), Expect = 1e-59
 Identities = 170/187 (90%)
 Strand = Plus / Minus

                                                                       
Query: 75  gaacttgcctatgcaaagatgatgccatactccttaatggtgtcgatgacaatcccgagc 134
           |||||||||||  |||| || ||||| | ||||||||||||||||||||| || || |||
Sbjct: 187 gaacttgcctaaacaaatataatgccgtgctccttaatggtgtcgatgacgatgccaagc 128

                                                                       
Query: 135 ttcccctcgatcctctcgttcttcttgggctcgtacgccatggcgaagacgtcggcgtcc 194
           ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 127 ttcccctcgatcctctcgttcttcttgggctcgtaggacatggcgaagacgtcggcgtcc 68

                                                                       
Query: 195 atggacctctcggntatgagacggccgatggtcctgcaggcgttgtcgtctatgagggac 254
           |||||||||||||  ||||| ||||||||||||||||||||||||||||| | |||||| 
Sbjct: 67  atggacctctcggcgatgaggcggccgatggtcctgcaggcgttgtcgtcgacgagggag 8

                  
Query: 255 ggcagcg 261
           |||||||
Sbjct: 7   ggcagcg 1
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  141 bits (71), Expect = 2e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 308      gctggtgccccggtgcatgaccttggcgtggacgaagcgcttggagaagaagacgttgag 367
                ||||||||||| |||||  ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 17709032 gctggtgcccctgtgcacaaccttggcgtggacgaatcgcttggagaagaagacgttgag 17709091

                                                                   
Query: 368      caggaacgggcgcatgtacatgtccgtgcgctgcttccacgacttgcggtt 418
                ||| ||||| ||||||||||||||| ||| |||||| || |||||||||||
Sbjct: 17709092 cagaaacggccgcatgtacatgtccatgcactgcttacatgacttgcggtt 17709142



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 332      ggcgtggacgaagcgcttggaga 354
                |||||||||||||||||||||||
Sbjct: 26127218 ggcgtggacgaagcgcttggaga 26127240
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>dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1288_C01
          Length = 111223

 Score =  141 bits (71), Expect = 2e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                         
Query: 308   gctggtgccccggtgcatgaccttggcgtggacgaagcgcttggagaagaagacgttgag 367
             ||||||||||| |||||  ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 86930 gctggtgcccctgtgcacaaccttggcgtggacgaatcgcttggagaagaagacgttgag 86989

                                                                
Query: 368   caggaacgggcgcatgtacatgtccgtgcgctgcttccacgacttgcggtt 418
             ||| ||||| ||||||||||||||| ||| |||||| || |||||||||||
Sbjct: 86990 cagaaacggccgcatgtacatgtccatgcactgcttacatgacttgcggtt 87040
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>ref|NM_197733.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0042H09.18), mRNA
          Length = 564

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 338 gacgaagcgcttggagaagaagacgttgagc 368
           ||||||||||||||||| |||||||| ||||
Sbjct: 297 gacgaagcgcttggagatgaagacgtcgagc 267
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>tpg|BK005031.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY
            transcription factor 28 (WRKY28) gene, complete cds
          Length = 4123

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 332  ggcgtggacgaagcgcttggaga 354
            |||||||||||||||||||||||
Sbjct: 3574 ggcgtggacgaagcgcttggaga 3552
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>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
             sequence
          Length = 144191

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 338   gacgaagcgcttggagaagaagacgttgagc 368
             ||||||||||||||||| |||||||| ||||
Sbjct: 81582 gacgaagcgcttggagatgaagacgtcgagc 81612
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 338      gacgaagcgcttggagaagaagacgttgagc 368
                ||||||||||||||||| |||||||| ||||
Sbjct: 21528475 gacgaagcgcttggagatgaagacgtcgagc 21528445
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>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062J02
          Length = 151636

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 332    ggcgtggacgaagcgcttggaga 354
              |||||||||||||||||||||||
Sbjct: 106463 ggcgtggacgaagcgcttggaga 106485
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>dbj|AK119644.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-G04, full
           insert sequence
          Length = 1335

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 332 ggcgtggacgaagcgcttggaga 354
           |||||||||||||||||||||||
Sbjct: 552 ggcgtggacgaagcgcttggaga 530
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>dbj|AK106282.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-A04, full
           insert sequence
          Length = 1413

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 332 ggcgtggacgaagcgcttggaga 354
           |||||||||||||||||||||||
Sbjct: 630 ggcgtggacgaagcgcttggaga 608
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>dbj|AK070091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040K18, full
           insert sequence
          Length = 1003

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 338 gacgaagcgcttggagaagaagacgttgagc 368
           ||||||||||||||||| |||||||| ||||
Sbjct: 607 gacgaagcgcttggagatgaagacgtcgagc 577
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 338      gacgaagcgcttggagaagaagacgttgagc 368
                ||||||||||||||||| |||||||| ||||
Sbjct: 21540138 gacgaagcgcttggagatgaagacgtcgagc 21540108
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>ref|XM_365502.1| Magnaporthe grisea 70-15 hypothetical protein (MG02204.4) partial
            mRNA
          Length = 1614

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 274  ccttggcgttggtggtggcgac 295
            ||||||||||||||||||||||
Sbjct: 1301 ccttggcgttggtggtggcgac 1322
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>ref|XM_864628.1| PREDICTED: Bos taurus similar to Adapter-related protein complex 4
           epsilon 1 subunit (Epsilon subunit of AP-4) (AP-4
           adapter complex epsilon subunit) (LOC613640), mRNA
          Length = 1353

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  agcaactgtttctgctcctac 70
           |||||||||||||||||||||
Sbjct: 192 agcaactgtttctgctcctac 212
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>ref|XM_535479.2| PREDICTED: Canis familiaris similar to Adapter-related protein
           complex 4 epsilon 1 subunit (Epsilon subunit of AP-4)
           (AP-4 adapter complex epsilon subunit) (LOC478304), mRNA
          Length = 4153

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  agcaactgtttctgctcctac 70
           |||||||||||||||||||||
Sbjct: 227 agcaactgtttctgctcctac 247
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>ref|NM_112914.3| Arabidopsis thaliana structural constituent of ribosome AT3G20230
           mRNA, complete cds
          Length = 1454

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggagaagaagacgttgagcaggaacgggcgcatgtacatgtccgtgcgctgcttccacg 408
           |||||||||| || || || ||||| || | ||||||||||||||| | ||| ||||| |
Sbjct: 374 tggagaagaacacattcagaaggaaaggcctcatgtacatgtccgttctctgtttccatg 315

               
Query: 409 actt 412
           ||||
Sbjct: 314 actt 311
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>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07,
             complete sequence
          Length = 156163

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   aaccttgctggtgccccggt 321
             ||||||||||||||||||||
Sbjct: 54926 aaccttgctggtgccccggt 54945
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>gb|BT000934.1| Arabidopsis thaliana clone C105254 unknown protein (At3g20230)
           mRNA, complete cds
          Length = 595

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggagaagaagacgttgagcaggaacgggcgcatgtacatgtccgtgcgctgcttccacg 408
           |||||||||| || || || ||||| || | ||||||||||||||| | ||| ||||| |
Sbjct: 295 tggagaagaacacattcagaaggaaaggcctcatgtacatgtccgttctctgtttccatg 236

               
Query: 409 actt 412
           ||||
Sbjct: 235 actt 232
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>gb|AY090951.1| Arabidopsis thaliana At3g20230 mRNA sequence
          Length = 1368

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggagaagaagacgttgagcaggaacgggcgcatgtacatgtccgtgcgctgcttccacg 408
           |||||||||| || || || ||||| || | ||||||||||||||| | ||| ||||| |
Sbjct: 792 tggagaagaacacattcagaaggaaaggcctcatgtacatgtccgttctctgtttccatg 733

               
Query: 409 actt 412
           ||||
Sbjct: 732 actt 729
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 361     cgttgagcaggaacgggcgcatgt 384
               ||||||||||||||| ||||||||
Sbjct: 3232798 cgttgagcaggaacgagcgcatgt 3232775
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>gb|AC154531.2| Mus musculus BAC clone RP23-468B10 from chromosome 14, complete sequence
          Length = 180565

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 306    ttgctggtgccccggtgcatgacc 329
              ||||||||||||| ||||||||||
Sbjct: 126222 ttgctggtgccccagtgcatgacc 126199
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>ref|XM_392550.2| PREDICTED: Apis mellifera similar to ENSANGP00000019435
           (LOC409020), mRNA
          Length = 8601

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 agaagaagacgttgagcagg 371
           ||||||||||||||||||||
Sbjct: 500 agaagaagacgttgagcagg 519
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 302      aaccttgctggtgccccggt 321
                ||||||||||||||||||||
Sbjct: 18415089 aaccttgctggtgccccggt 18415108
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>emb|BX824415.1|CNS0A6QL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH47ZF09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 846

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggagaagaagacgttgagcaggaacgggcgcatgtacatgtccgtgcgctgcttccacg 408
           |||||||||| || || || ||||| || | ||||||||||||||| | ||| ||||| |
Sbjct: 374 tggagaagaacacattcagaaggaaaggcctcatgtacatgtccgttctctgtttccatg 315

               
Query: 409 actt 412
           ||||
Sbjct: 314 actt 311
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>emb|BX825691.1|CNS0A6FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL56ZG05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 817

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggagaagaagacgttgagcaggaacgggcgcatgtacatgtccgtgcgctgcttccacg 408
           |||||||||| || || || ||||| || | ||||||||||||||| | ||| ||||| |
Sbjct: 300 tggagaagaacacattcagaaggaaaggcctcatgtacatgtccgttctctgtttccatg 241

               
Query: 409 actt 412
           ||||
Sbjct: 240 actt 237
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>emb|BX826252.1|CNS0A6AH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL94ZD09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 612

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggagaagaagacgttgagcaggaacgggcgcatgtacatgtccgtgcgctgcttccacg 408
           |||||||||| || || || ||||| || | ||||||||||||||| | ||| ||||| |
Sbjct: 305 tggagaagaacacattcagaaggaaaggcctcatgtacatgtccgttctctgtttccatg 246

               
Query: 409 actt 412
           ||||
Sbjct: 245 actt 242
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>emb|BX825936.1|CNS0A4UE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL74ZA05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 609

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggagaagaagacgttgagcaggaacgggcgcatgtacatgtccgtgcgctgcttccacg 408
           |||||||||| || || || ||||| || | ||||||||||||||| | ||| ||||| |
Sbjct: 300 tggagaagaacacattcagaaggaaaggcctcatgtacatgtccgttctctgtttccatg 241

               
Query: 409 actt 412
           ||||
Sbjct: 240 actt 237
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>gb|AY086535.1| Arabidopsis thaliana clone 256294 mRNA, complete sequence
          Length = 865

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 349 tggagaagaagacgttgagcaggaacgggcgcatgtacatgtccgtgcgctgcttccacg 408
           |||||||||| || || || ||||| || | ||||||||||||||| | ||| ||||| |
Sbjct: 307 tggagaagaacacattcagaaggaaaggcctcatgtacatgtccgttctctgtttccatg 248

               
Query: 409 actt 412
           ||||
Sbjct: 247 actt 244
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     tctcgttcttcttgggctcg 167
               ||||||||||||||||||||
Sbjct: 8640041 tctcgttcttcttgggctcg 8640022
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>dbj|AB119059.1| Nannochloris bacillaris NbftsZ2 gene for plastid division protein
           FtsZ2, complete cds
          Length = 2196

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 270 aggtccttggcgttggtggtggcg 293
           |||| |||||||||||||||||||
Sbjct: 487 aggtacttggcgttggtggtggcg 510
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>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21
          Length = 83253

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 349   tggagaagaagacgttgagcaggaacgggcgcatgtacatgtccgtgcgctgcttccacg 408
             |||||||||| || || || ||||| || | ||||||||||||||| | ||| ||||| |
Sbjct: 76126 tggagaagaacacattcagaaggaaaggcctcatgtacatgtccgttctctgtttccatg 76185

                 
Query: 409   actt 412
             ||||
Sbjct: 76186 actt 76189
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 353     gaagaagacgttgagcaggaacgg 376
               ||||||||||| ||||||||||||
Sbjct: 4080261 gaagaagacgtcgagcaggaacgg 4080284



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 268     tgaggtccttggcgttggtg 287
               ||||||||||||||||||||
Sbjct: 2583952 tgaggtccttggcgttggtg 2583933
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 321     tgcatgaccttggcgtggac 340
               ||||||||||||||||||||
Sbjct: 6721044 tgcatgaccttggcgtggac 6721025


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,677,685
Number of Sequences: 3902068
Number of extensions: 2677685
Number of successful extensions: 48337
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48050
Number of HSP's gapped (non-prelim): 287
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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