ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39d10 |
|---|---|
| Clone Library Name | barley_pub |
>AOFB_RAT (P19643) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 32.3 bits (72), Expect = 1.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 577 CCLSELHAVSSLWHLTSIGSSNGTIVVVSSRDGG 678 C +E H VS+LW L + GT ++S+ +GG Sbjct: 171 CVTAETHEVSALWFLWYVKQCGGTTRIISTTNGG 204
>AOFB_PONPY (Q5RE98) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 32.3 bits (72), Expect = 1.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 577 CCLSELHAVSSLWHLTSIGSSNGTIVVVSSRDGG 678 C +E H VS+LW L + GT ++S+ +GG Sbjct: 171 CVTAETHEVSALWFLWYVKQCGGTTRIISTTNGG 204
>AOFB_PIG (Q6PLK3) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 32.3 bits (72), Expect = 1.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 577 CCLSELHAVSSLWHLTSIGSSNGTIVVVSSRDGG 678 C +E H VS+LW L + GT ++S+ +GG Sbjct: 171 CVTAETHEVSALWFLWYVKQCGGTTRIISTTNGG 204
>AOFB_MOUSE (Q8BW75) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 32.3 bits (72), Expect = 1.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 577 CCLSELHAVSSLWHLTSIGSSNGTIVVVSSRDGG 678 C +E H VS+LW L + GT ++S+ +GG Sbjct: 171 CVTAETHEVSALWFLWYVKQCGGTTRIISTTNGG 204
>AOFB_HUMAN (P27338) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 32.3 bits (72), Expect = 1.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 577 CCLSELHAVSSLWHLTSIGSSNGTIVVVSSRDGG 678 C +E H VS+LW L + GT ++S+ +GG Sbjct: 171 CVTAETHEVSALWFLWYVKQCGGTTRIISTTNGG 204
>AOFB_CANFA (Q7YRB7) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 32.3 bits (72), Expect = 1.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 577 CCLSELHAVSSLWHLTSIGSSNGTIVVVSSRDGG 678 C +E H VS+LW L + GT ++S+ +GG Sbjct: 171 CVTAETHEVSALWFLWYVKQCGGTTRIISTTNGG 204
>AOFB_CAVPO (P58028) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 32.0 bits (71), Expect = 2.0 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 577 CCLSELHAVSSLWHLTSIGSSNGTIVVVSSRDGG 678 C +E H VS+LW L + GT ++S+ +GG Sbjct: 171 CFTAETHEVSALWFLWYVKQCGGTTRIISTTNGG 204
>AOFB_BOVIN (P56560) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 32.0 bits (71), Expect = 2.0 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 577 CCLSELHAVSSLWHLTSIGSSNGTIVVVSSRDGG 678 C +E+H VS+LW L + GT + S+ +GG Sbjct: 171 CVTAEIHEVSALWFLWYVKQCGGTTRIFSTSNGG 204
>MTC1_COREQ (P42828) Modification methylase CeqI (EC 2.1.1.72)| (Adenine-specific methyltransferase CeqI) (M.CeqI) Length = 517 Score = 30.8 bits (68), Expect = 4.5 Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = -1 Query: 433 RPRGT-RWRSSSKISGSLARPSHRGRVS*RPCTPNPRPSWRIARPLRWNFP-DESLSCSG 260 RPRG RW S+ SG L P R RP P P ARP R P S C+G Sbjct: 12 RPRGRGRWPRLSRRSGCLEVPGRPRRPFLRPTVPGPTS----ARPRRGRAPHGRSTRCTG 67
>OGT_MYCTU (P0A696) Methylated-DNA--protein-cysteine methyltransferase (EC| 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) Length = 165 Score = 30.0 bits (66), Expect = 7.6 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -2 Query: 348 VPVHQIQGRRGELQGLSGGISLMRASAALE 259 VP H++ G G+L G GGI+ RA LE Sbjct: 124 VPCHRVIGASGKLTGYGGGINRKRALLELE 153
>OGT_MYCBO (P0A697) Methylated-DNA--protein-cysteine methyltransferase (EC| 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) Length = 165 Score = 30.0 bits (66), Expect = 7.6 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -2 Query: 348 VPVHQIQGRRGELQGLSGGISLMRASAALE 259 VP H++ G G+L G GGI+ RA LE Sbjct: 124 VPCHRVIGASGKLTGYGGGINRKRALLELE 153
>CSF1_ASHGO (Q74ZX0) Protein CSF1| Length = 2887 Score = 29.6 bits (65), Expect = 10.0 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Frame = -3 Query: 179 AGLSSSVVTTKEM---FVSEISLRYLFTV*TENISHLVNVHGNRL 54 A SSVV + + ++S++ LRY FT +EN + +HG +L Sbjct: 2062 ADFYSSVVRKQRINTSYLSDMQLRYWFTEDSENTDLFIRIHGAKL 2106
>STA13_MOUSE (Q923Q2) StAR-related lipid transfer protein 13 (StARD13) (START| domain-containing protein 13) Length = 1113 Score = 29.6 bits (65), Expect = 10.0 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -1 Query: 490 SASRST-AQITRKRCCLRSWRPRGTRWRSSSKISGSLARPSHRGRVS*RPCTPNPRPS 320 S R+T + + R R L G R R S + SL RP+ R R S + P+PS Sbjct: 542 SEGRTTPSDVERDRTSLNESEATGVRERRDSGVGASLTRPNRRLRWSSFQLSHQPQPS 599 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,729,292 Number of Sequences: 219361 Number of extensions: 1729945 Number of successful extensions: 4784 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 4632 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4784 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7536258401 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
