>CCNB2_SOYBN (P25012) G2/mitotic-specific cyclin S13-7 (B-like cyclin)|
           (Fragment)
          Length = 257

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -3

Query: 549 ARVLVMAHATAPESKLKAIYRKYSSEQYG 463
           AR+LV  H+T    KL+ +YRKYS  Q G
Sbjct: 209 ARLLVGFHSTLGNGKLRVVYRKYSDPQKG 237

>ATM_CANGA (Q6FRZ9) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase TEL1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2763

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 166  RVCSFICLNRLHSKYDLLGFRIKRAGLYLLCMFRVCDAIHQTICCLQCND 17
            ++C F+  + L+SKY L  F + R GL+L     +   +   I    CND
Sbjct: 864  KLCQFLAKSLLNSKYQLSDFSMIRLGLFLTSTIELWVNVKYNILNSDCND 913

>FZD5_MOUSE (Q9EQD0) Frizzled 5 precursor (Frizzled-5) (Fz-5) (mFz5)|
          Length = 577

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +3

Query: 321 PGVSSDSKPSFLDQDFKSQAANPKSRPLNPTRPDAEERQLLGG---GGPHVRT 470
           P +  D++   +D +     A+PKS P  PT P  + R L GG   GG  V++
Sbjct: 137 PVLGGDAEVLCMDYNRSETTASPKSFPAKPTLPGPQGRHLPGGECSGGHRVQS 189

>CCN1_ANTMA (P34800) G2/mitotic-specific cyclin-1|
          Length = 473

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
 Frame = -3

Query: 564 GFREP-----ARVLVMAHATAPESKLKAIYRKYSSEQYG 463
           GF EP     A++LV     A + KLK+IYRKYS+ + G
Sbjct: 395 GFSEPQLMDCAKLLVAFPKMAGDQKLKSIYRKYSNLERG 433

>POL_SOCMV (P15629) Enzymatic polyprotein [Contains: Aspartic protease (EC|
           3.4.23.-); Endonuclease; Reverse transcriptase (EC
           2.7.7.49)]
          Length = 692

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = -3

Query: 366 SLDPESLVYYLMIHQGVQQPIYSFICLNRLHSKYDLLGFRIKRA 235
           SLD +S  Y L +H+  + P+ +F C  + H ++++L F +K+A
Sbjct: 295 SLDAKSGYYQLRLHENTK-PLTAFSCPPQKHYEWNVLSFGLKQA 337

>CCNB1_SOYBN (P25011) G2/mitotic-specific cyclin S13-6 (B-like cyclin)|
          Length = 454

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -3

Query: 549 ARVLVMAHATAPESKLKAIYRKYSSEQYG 463
           AR+LV  ++T    KL+ +YRKYS  Q G
Sbjct: 405 ARLLVGFYSTLENGKLRVVYRKYSDPQKG 433

>LRP10_HUMAN (Q7Z4F1) Low-density lipoprotein receptor-related protein 10|
           precursor
          Length = 713

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -1

Query: 524 PPLPRASSRPSTGSTPASSTDVWPSAPQQLPLLSVWPS 411
           PPLP  +  PS  ++PA +T   P AP  LP L + PS
Sbjct: 614 PPLPIKAPLPSASTSPAPTT--VPEAPGPLPSLPLEPS 649

>IF2_XANCP (Q8P7U7) Translation initiation factor IF-2|
          Length = 916

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 PGVSSDSKPSFLDQDFKSQAANPKSRPLNPTRPD 422
           P   + S PS   +  +   A+P SRP  P RPD
Sbjct: 213 PAARAPSSPSSAPRPARPAGASPASRPATPARPD 246

>BCOR_MOUSE (Q8CGN4) BCoR protein (BCL-6 corepressor)|
          Length = 1759

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -1

Query: 563 VSGSLPGCWSWLTPPLPRASSRPSTGSTPASSTDVWPSAPQQLPLLSVWPS 411
           V+  LPG  + L PP PR S+R    + PA+ T  +    +  P +S  PS
Sbjct: 321 VNSGLPGDTALLLPPSPRPSARVHLPTQPAAET--YSEFHKHYPRISTSPS 369

>IF2_XANC8 (Q4UWA2) Translation initiation factor IF-2|
          Length = 902

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 PGVSSDSKPSFLDQDFKSQAANPKSRPLNPTRPD 422
           P   + S PS   +  +   A+P SRP  P RPD
Sbjct: 199 PAARAPSSPSSAPRPARPAGASPASRPATPARPD 232

>CD248_HUMAN (Q9HCU0) Endosialin precursor (Tumor endothelial marker 1) (CD248|
           antigen)
          Length = 757

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +3

Query: 327 VSSDSKPSFLDQDFKSQAANPKSRPLNPTRPDAEERQLLGGGGPHVRTARWSTS 488
           V + ++P+ L     SQ+   ++ P++PT P ++  Q+    GP  + A W  S
Sbjct: 608 VPAATQPAALPTLLPSQSPTNQTSPISPTHPHSKAPQIPREDGPSPKLALWLPS 661

>PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)|
          Length = 1004

 Score = 24.3 bits (51), Expect(2) = 7.9
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 336  DSKPSFLDQDFKSQAANPKSRPLNPTRPDAEERQLLGGGG 455
            D +PS       SQA  P+ RP N     A    L+GG G
Sbjct: 902  DEEPSEEAAMMSSQAQGPQRRPCN---CKASSSSLIGGSG 938



 Score = 23.5 bits (49), Expect(2) = 7.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 181 NSLVYRITYSEHTEQVQPSSLDSKAKQII 267
           ++++Y   +SE T    PSS+ +K + +I
Sbjct: 865 DNVLYSCDFSEKTPPTPPSSIVAKVQSVI 893

>PHF12_MOUSE (Q5SPL2) PHD finger protein 12 (PHD factor 1) (Pf1)|
          Length = 1003

 Score = 24.3 bits (51), Expect(2) = 7.9
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 336  DSKPSFLDQDFKSQAANPKSRPLNPTRPDAEERQLLGGGG 455
            D +PS       SQA  P+ RP N     A    L+GG G
Sbjct: 901  DEEPSEEAAMMSSQAQGPQRRPCN---CKASSSSLIGGSG 937



 Score = 23.5 bits (49), Expect(2) = 7.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 181 NSLVYRITYSEHTEQVQPSSLDSKAKQII 267
           ++++Y   +SE T    PSS+ +K + +I
Sbjct: 864 DNVLYSCDFSEKTPPTPPSSIVAKVQSVI 892

>IF2_XANOR (Q5GXU9) Translation initiation factor IF-2|
          Length = 906

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 PGVSSDSKPSFLDQDFKSQAANPKSRPLNPTRPD 422
           P   + S PS   +  +   A+P SRP  P RPD
Sbjct: 202 PAARAPSSPSSAPRPSRPGGASPASRPSTPARPD 235

>CCNB_DROME (P20439) G2/mitotic-specific cyclin-B|
          Length = 530

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 573 SVVGFREPARVLVMAHATAPESKLKAIYRKYSSEQY 466
           S    R   R++      AP++KLKAIY KY   ++
Sbjct: 471 SAAHLRPITRLIAKLARDAPQAKLKAIYNKYQGSKF 506

>GRLF1_MOUSE (Q91YM2) Glucocorticoid receptor DNA-binding factor 1 (Fragment)|
          Length = 1337

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 557  GSLPGCWSWLTPPLPRASSRPSTGS-TPASSTDVWPSAPQQLPLLS 423
            G+ PG  S + P +P  +S P+T   +P  S    P +P Q PLLS
Sbjct: 1284 GAAPGSPSAMAPTVPFLTSTPATSQPSPPQSPPPTPQSPMQ-PLLS 1328

>SLAP_BACCI (P35824) S-layer-related protein precursor|
          Length = 1616

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 19/67 (28%)
 Frame = -1

Query: 548  PGCWSWLTPP-----LPRASSRPSTGSTPASSTDV-----WPSAPQQLPLL--------- 426
            P  WSW  PP      P AS+RP     P S+T+      W       P L         
Sbjct: 1398 PRRWSWTRPPECSASCPPASNRPGARRRPLSATEAGGPTRWSPPRSASPTLHPTGRARMS 1457

Query: 425  SVWPSGI 405
            S WP  I
Sbjct: 1458 SCWPRSI 1464


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,512,715
Number of Sequences: 219361
Number of extensions: 1627695
Number of successful extensions: 5317
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5310
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)