ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39d07 |
|---|---|
| Clone Library Name | barley_pub |
>CFA_ECOLI (P0A9H7) Cyclopropane-fatty-acyl-phospholipid synthase (EC| 2.1.1.79) (Cyclopropane fatty acid synthase) (CFA synthase) Length = 381 Score = 69.7 bits (169), Expect = 7e-12 Identities = 37/96 (38%), Positives = 56/96 (58%) Frame = -3 Query: 589 FIKEYIFPGGCLPSLARITSAMSAASRLCIEQVENIGYHYYPTLIRWRDNFMANKDAILA 410 +I +YIFP GCLPS+ +I A S+ +E N G Y TL+ W + F+A I A Sbjct: 279 WINKYIFPNGCLPSVRQI--AQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEI-A 335 Query: 409 LGFDDKFIRVWEYYFIYCAAGFKSRTLGTYQIVFSR 302 + ++F R++ YY CA F++R + +Q+VFSR Sbjct: 336 DNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSR 371
>CFA_ECOL6 (P0A9H8) Cyclopropane-fatty-acyl-phospholipid synthase (EC| 2.1.1.79) (Cyclopropane fatty acid synthase) (CFA synthase) Length = 381 Score = 69.7 bits (169), Expect = 7e-12 Identities = 37/96 (38%), Positives = 56/96 (58%) Frame = -3 Query: 589 FIKEYIFPGGCLPSLARITSAMSAASRLCIEQVENIGYHYYPTLIRWRDNFMANKDAILA 410 +I +YIFP GCLPS+ +I A S+ +E N G Y TL+ W + F+A I A Sbjct: 279 WINKYIFPNGCLPSVRQI--AQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEI-A 335 Query: 409 LGFDDKFIRVWEYYFIYCAAGFKSRTLGTYQIVFSR 302 + ++F R++ YY CA F++R + +Q+VFSR Sbjct: 336 DNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSR 371
>YLP3_PSEPU (P31049) Hypothetical 44.7 kDa methyltransferase in lpd-3 5'region| (EC 2.1.1.-) (ORF3) Length = 394 Score = 57.8 bits (138), Expect = 3e-08 Identities = 33/103 (32%), Positives = 53/103 (51%) Frame = -3 Query: 598 SSDFIKEYIFPGGCLPSLARITSAMSAASRLCIEQVENIGYHYYPTLIRWRDNFMANKDA 419 + +FI Y+FP G LP L+ I++++ A L + VE++ HY TL W +N Sbjct: 280 AGEFIDRYVFPHGELPHLSMISASICEAG-LEVVDVESLRLHYAKTLHHWSENLENQLHK 338 Query: 418 ILALGFDDKFIRVWEYYFIYCAAGFKSRTLGTYQIVFSRPGND 290 AL +K +R+W Y CA F+ + +QI+ +P D Sbjct: 339 AAAL-VPEKTLRIWRLYLAGCAYAFEKGWINLHQILAVKPYAD 380
>CFA2_MYCLE (Q49807) Cyclopropane-fatty-acyl-phospholipid synthase (EC| 2.1.1.79) (Cyclopropane fatty acid synthase) (CFA synthase) (Cyclopropane mycolic acid synthase) Length = 308 Score = 47.0 bits (110), Expect = 5e-05 Identities = 29/85 (34%), Positives = 42/85 (49%) Frame = -3 Query: 589 FIKEYIFPGGCLPSLARITSAMSAASRLCIEQVENIGYHYYPTLIRWRDNFMANKDAILA 410 FI IFPGG LP ++++ S A +E+ IG HY PTL W A+KD +A Sbjct: 215 FILTEIFPGGRLPKISQVDHYSSNAG-FTVERYHRIGSHYVPTLNAWAAALEAHKDEAIA 273 Query: 409 LGFDDKFIRVWEYYFIYCAAGFKSR 335 L + + +Y C+ F+ R Sbjct: 274 LQ-GRQIYDTYMHYLTGCSDLFRDR 297
>CFA2_MYCTU (P0A5P0) Cyclopropane-fatty-acyl-phospholipid synthase 2 (EC| 2.1.1.79) (Cyclopropane fatty acid synthase) (CFA synthase) (Cyclopropane mycolic acid synthase 2) Length = 302 Score = 46.6 bits (109), Expect = 6e-05 Identities = 28/85 (32%), Positives = 45/85 (52%) Frame = -3 Query: 589 FIKEYIFPGGCLPSLARITSAMSAASRLCIEQVENIGYHYYPTLIRWRDNFMANKDAILA 410 FI IFPGG LP ++++ S A +E+ IG +Y PTL W D A+KD +A Sbjct: 209 FILTEIFPGGRLPRISQVDYYSSNAGWK-VERYHRIGANYVPTLNAWADALQAHKDEAIA 267 Query: 409 LGFDDKFIRVWEYYFIYCAAGFKSR 335 L + + ++ +Y C+ F+ + Sbjct: 268 LKGQETY-DIYMHYLRGCSDLFRDK 291
>CFA2_MYCBO (P0A5P1) Cyclopropane-fatty-acyl-phospholipid synthase 2 (EC| 2.1.1.79) (Cyclopropane fatty acid synthase) (CFA synthase) (Cyclopropane mycolic acid synthase 2) Length = 302 Score = 46.6 bits (109), Expect = 6e-05 Identities = 28/85 (32%), Positives = 45/85 (52%) Frame = -3 Query: 589 FIKEYIFPGGCLPSLARITSAMSAASRLCIEQVENIGYHYYPTLIRWRDNFMANKDAILA 410 FI IFPGG LP ++++ S A +E+ IG +Y PTL W D A+KD +A Sbjct: 209 FILTEIFPGGRLPRISQVDYYSSNAGWK-VERYHRIGANYVPTLNAWADALQAHKDEAIA 267 Query: 409 LGFDDKFIRVWEYYFIYCAAGFKSR 335 L + + ++ +Y C+ F+ + Sbjct: 268 LKGQETY-DIYMHYLRGCSDLFRDK 291
>MMA1_MYCTU (P0A5Q0) Methoxy mycolic acid synthase 1 (EC 2.1.1.-) (Mycolic| methyltransferase A 1) Length = 286 Score = 45.8 bits (107), Expect = 1e-04 Identities = 29/96 (30%), Positives = 46/96 (47%) Frame = -3 Query: 589 FIKEYIFPGGCLPSLARITSAMSAASRLCIEQVENIGYHYYPTLIRWRDNFMANKDAILA 410 F++E IFPGG LPS I AA IE V+ + HY TL W N A ++ +A Sbjct: 193 FLRESIFPGGELPSEPDIVDNAQAAG-FTIEHVQLLQQHYARTLDAWAANLQAARERAIA 251 Query: 409 LGFDDKFIRVWEYYFIYCAAGFKSRTLGTYQIVFSR 302 + ++ + + +Y CA F+ + Q ++ Sbjct: 252 VQSEEVY-NNFMHYLTGCAERFRRGLINVAQFTMTK 286
>MMA1_MYCBO (P0A5Q1) Methoxy mycolic acid synthase 1 (EC 2.1.1.-) (Mycolic| methyltransferase A 1) Length = 286 Score = 45.8 bits (107), Expect = 1e-04 Identities = 29/96 (30%), Positives = 46/96 (47%) Frame = -3 Query: 589 FIKEYIFPGGCLPSLARITSAMSAASRLCIEQVENIGYHYYPTLIRWRDNFMANKDAILA 410 F++E IFPGG LPS I AA IE V+ + HY TL W N A ++ +A Sbjct: 193 FLRESIFPGGELPSEPDIVDNAQAAG-FTIEHVQLLQQHYARTLDAWAANLQAARERAIA 251 Query: 409 LGFDDKFIRVWEYYFIYCAAGFKSRTLGTYQIVFSR 302 + ++ + + +Y CA F+ + Q ++ Sbjct: 252 VQSEEVY-NNFMHYLTGCAERFRRGLINVAQFTMTK 286
>CFA_CITFR (P45509) Cyclopropane-fatty-acyl-phospholipid synthase (EC| 2.1.1.79) (Cyclopropane fatty acid synthase) (CFA synthase) (Fragment) Length = 89 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/76 (31%), Positives = 39/76 (51%) Frame = -3 Query: 529 AMSAASRLCIEQVENIGYHYYPTLIRWRDNFMANKDAILALGFDDKFIRVWEYYFIYCAA 350 A ++ SR +E N G Y TL+ W + F L+ + F R++ YY CA Sbjct: 5 AEASESRFVMEDWHNFGSDYDKTLMAWHERFNQAWPE-LSSRYSATFRRMFNYYLCACAG 63 Query: 349 GFKSRTLGTYQIVFSR 302 F++R + +Q++FSR Sbjct: 64 AFRARDIELWQVLFSR 79
>CFA1_MYCTU (Q11195) Cyclopropane-fatty-acyl-phospholipid synthase 1 (EC| 2.1.1.79) (Cyclopropane fatty acid synthase) (CFA synthase) (Cyclopropane mycolic acid synthase 1) Length = 287 Score = 43.9 bits (102), Expect = 4e-04 Identities = 28/83 (33%), Positives = 42/83 (50%) Frame = -3 Query: 589 FIKEYIFPGGCLPSLARITSAMSAASRLCIEQVENIGYHYYPTLIRWRDNFMANKDAILA 410 FI IFPGG LPS+ + SA + + +V+++ HY TL W ANK +A Sbjct: 194 FIVTEIFPGGRLPSIPMVQECASA-NGFTVTRVQSLQPHYAKTLDLWSAALQANKGQAIA 252 Query: 409 LGFDDKFIRVWEYYFIYCAAGFK 341 L ++ + R + Y CA F+ Sbjct: 253 LQSEEVYERYMK-YLTGCAEMFR 274
>SYT_METMA (Q8PRY4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 634 Score = 32.7 bits (73), Expect = 0.95 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 15/80 (18%) Frame = -3 Query: 508 LCIEQVENIGYHY--YPTLIRW-RDNFMANKDAILALG---FDDKFIRVWEYYFIYCAAG 347 LCI +EN+G H Y IR+ RD + ANKD ++ + + +W+ F Y Sbjct: 377 LCISVLENVGIHINDYEVAIRFTRDFYEANKDLVVNMAKTVNKPVLVEMWDTRFFYFVLK 436 Query: 346 F---------KSRTLGTYQI 314 F K+ L T QI Sbjct: 437 FEFNFVDALAKASALSTVQI 456
>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466| Length = 1526 Score = 30.8 bits (68), Expect = 3.6 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = -3 Query: 451 WRDNFMANKD-AILALGFDDKFIRVWEYYFIYCAAGFKSRTLGTYQIVFSRPGN 293 W ++ + N D + LA G D+ +R+WE C F+ T +VF+ G+ Sbjct: 1202 WVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGS 1255 Score = 30.0 bits (66), Expect = 6.2 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -3 Query: 418 ILALGFDDKFIRVWEYYFIYCAAGFKSRTLGTYQIVFS 305 +LA G DD+ +R+W+ C FK T +VFS Sbjct: 920 MLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFS 957
>SYT_METAC (Q8TLX7) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 635 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 15/80 (18%) Frame = -3 Query: 508 LCIEQVENIGYHY--YPTLIRW-RDNFMANKDAILALG---FDDKFIRVWEYYFIYCAAG 347 LCI+ +EN+G H Y IR+ RD + +NK+ ++ + + +W+ F Y Sbjct: 378 LCIDVLENVGIHIDDYEVAIRFTRDFYESNKELVVNMAKTVNKPVLVEMWDTRFFYFVLK 437 Query: 346 F---------KSRTLGTYQI 314 F K+ L T QI Sbjct: 438 FEFNFVDALAKASALSTVQI 457
>RCO1_NEUCR (P78706) Transcriptional repressor rco-1| Length = 604 Score = 29.6 bits (65), Expect = 8.0 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Frame = -3 Query: 526 MSAASRLCIEQVENI---GYHYYPTLIRWRDNFMANKDAILALGFDDKFIRVWEYYFIYC 356 + +LCI Q ENI G Y ++ D LA G +DK IRVW+ Sbjct: 325 VETGEKLCILQDENIDLTGDLYIRSVCFSPDG------KYLATGAEDKLIRVWDIQSRTI 378 Query: 355 AAGFKSRTLGTYQIVFSRPG 296 F Y + FSR G Sbjct: 379 RNTFHGHEQDIYSLDFSRDG 398 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,314,783 Number of Sequences: 219361 Number of extensions: 2062393 Number of successful extensions: 5255 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 5079 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5248 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
