ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK111684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
2dbj|AK069115.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 5e-57
3ref|XM_478073.1| Oryza sativa (japonica cultivar-group), mRNA 129 1e-26
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
5dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
6dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 92 3e-15
9emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111... 92 3e-15
10gb|AY574038.1| Gossypium hirsutum cyclopropane fatty acid syntha... 52 0.002
11ref|NM_113256.3| Arabidopsis thaliana cyclopropane-fatty-acyl-ph... 50 0.009
12gb|BT000811.1| Arabidopsis thaliana At3g23520 mRNA sequence 50 0.009
13gb|AY065013.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, compl... 50 0.009
14gb|AY064962.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, compl... 50 0.009
15gb|BT006344.1| Arabidopsis thaliana At3g23510/MEE5_5 gene, compl... 50 0.009
16dbj|AK176391.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 50 0.009
17gb|BT001134.1| Arabidopsis thaliana At3g23510/MEE5_5 mRNA, compl... 50 0.009
18gb|AC131036.4| Mus musculus chromosome 5, clone RP23-358D12, com... 44 0.57
19gb|AC163275.4| Mus musculus chromosome 5, clone RP23-458G12, com... 44 0.57
20dbj|AK083447.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 44 0.57
21gb|AY342401.1| Homo sapiens vitamin D (1,25-dihydroxyvitamin D3)... 42 2.2
22gb|AC004466.1| Homo sapiens 12 PAC RPCI5-1057I20 (Roswell Park C... 42 2.2
23gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
24gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
25emb|AL139137.15| Human DNA sequence from clone RP11-58O13 on chr... 40 8.8
26gb|AC092931.8| Homo sapiens 3 BAC RP11-131O20 (Roswell Park Canc... 40 8.8
27emb|AL050322.13|HSJ727I10 Human DNA sequence from clone RP4-727I... 40 8.8
28emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chro... 40 8.8
29emb|AL831789.6| Zebrafish DNA sequence from clone CH211-207O21 i... 40 8.8
30gb|AC093795.3| Homo sapiens BAC clone RP11-299P3 from 4, complet... 40 8.8
31dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
32dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
36gb|AC003036.1|AC003036 Homo sapiens Xp22 PAC RPCI1-108M6 (Roswel... 40 8.8
37ref|NM_001007158.1| Danio rerio polycomb group ring finger 1 (pc... 40 8.8
38dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
39dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
40dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
41dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
42dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, ... 40 8.8
43dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
44emb|CR846102.12| Zebrafish DNA sequence from clone DKEY-50I13 in... 40 8.8
45gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 8.8 
>dbj|AK111684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169K10, full
            insert sequence
          Length = 1367

 Score =  232 bits (117), Expect = 1e-57
 Identities = 303/365 (83%)
 Strand = Plus / Minus

                                                                        
Query: 284  cagcttgtcattgccaggtcgcgaaaatacaatctggtaagttccaagcgtccgtgactt 343
            ||||||||| |||||||| || || || |||||||||||  ||||||| || ||||||||
Sbjct: 1129 cagcttgtcgttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgactt 1070

                                                                        
Query: 344  gaaaccggccgcgcagtatatgaaataatactcccatacacgaatgaacttgtcgtcaaa 403
            ||| || || ||||||||||||||||| ||||||||||  || ||||||||||| || ||
Sbjct: 1069 gaacccagctgcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaa 1010

                                                                        
Query: 404  tcccagagccaaaattgcatctttgttggccataaagttatccctccagcgtatcagcgt 463
            |||||| | |   ||  | ||| |||| ||||| ||||| |||| |||||||||||||||
Sbjct: 1009 tcccagggactttatctcttctctgttagccatgaagttgtcccgccagcgtatcagcgt 950

                                                                        
Query: 464  cgggtagtaatggtatccgatgttctcaacctgctcgatgcagagccttgacgcagcgga 523
             |||||||| ||||| || || ||||| |  ||||||||||| ||||| ||||  | |||
Sbjct: 949  ggggtagtagtggtacccaatattctccaagtgctcgatgcatagcctcgacgaggtgga 890

                                                                        
Query: 524  catggcagacgtgatccgggccaaggaaggaaggcaaccccctggaaagatgtattcctt 583
            |||||| || || ||||| | |||||| |||||||||||||| ||||| |||||||||||
Sbjct: 889  catggcggatgttatccgagacaaggatggaaggcaacccccaggaaatatgtattcctt 830

                                                                        
Query: 584  tatgaagtctgaacttctcctgtattcctcataccgttcttctggaatcgatataaactg 643
             |||||||||||||| | ||||||||| || ||||||||||| || || || || |||||
Sbjct: 829  gatgaagtctgaactccccctgtattcttcgtaccgttcttcagggatggagatgaactg 770

                 
Query: 644  gagga 648
            |||||
Sbjct: 769  gagga 765
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>dbj|AK069115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H02, full
            insert sequence
          Length = 2846

 Score =  230 bits (116), Expect = 5e-57
 Identities = 281/336 (83%)
 Strand = Plus / Minus

                                                                        
Query: 309  aatacaatctggtaagttccaagcgtccgtgacttgaaaccggccgcgcagtatatgaaa 368
            ||||||||||||||   |||||| ||||  || || |||||||| |||||||||||||||
Sbjct: 2629 aatacaatctggtagtctccaagtgtcctggatttaaaaccggctgcgcagtatatgaaa 2570

                                                                        
Query: 369  taatactcccatacacgaatgaacttgtcgtcaaatcccagagccaaaattgcatctttg 428
            || |||||||||  |||||||||||| || ||||| ||||| |||||||||  |||||| 
Sbjct: 2569 tagtactcccatgtacgaatgaacttctcatcaaagcccagggccaaaattttatcttta 2510

                                                                        
Query: 429  ttggccataaagttatccctccagcgtatcagcgtcgggtagtaatggtatccgatgttc 488
            |||||||| ||||| ||||||||||||||||| || |  || |||||||| || || |||
Sbjct: 2509 ttggccatgaagttgtccctccagcgtatcagagttgtataataatggtacccaatattc 2450

                                                                        
Query: 489  tcaacctgctcgatgcagagccttgacgcagcggacatggcagacgtgatccgggccaag 548
            ||||| ||||| |||||||||||||| ||||| ||||||||||| || ||||| | ||  
Sbjct: 2449 tcaacgtgctcaatgcagagccttgatgcagcagacatggcagatgttatccgagtcaga 2390

                                                                        
Query: 549  gaaggaaggcaaccccctggaaagatgtattcctttatgaagtctgaacttctcctgtat 608
            ||||||||||| || || || || |||||||| || || |||||||| ||||||| ||| 
Sbjct: 2389 gaaggaaggcatccaccagggaatatgtattctttaataaagtctgagcttctccggtac 2330

                                                
Query: 609  tcctcataccgttcttctggaatcgatataaactgg 644
            || ||||||||||| || ||||| || |||||||||
Sbjct: 2329 tcatcataccgttcctccggaattgagataaactgg 2294
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>ref|XM_478073.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2397

 Score =  129 bits (65), Expect = 1e-26
 Identities = 182/221 (82%)
 Strand = Plus / Minus

                                                                        
Query: 284  cagcttgtcattgccaggtcgcgaaaatacaatctggtaagttccaagcgtccgtgactt 343
            ||||||||| |||||||| || || || |||||||||||  ||||||| || ||||||||
Sbjct: 2352 cagcttgtcgttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgactt 2293

                                                                        
Query: 344  gaaaccggccgcgcagtatatgaaataatactcccatacacgaatgaacttgtcgtcaaa 403
            ||| || || ||||||||||||||||| ||||||||||  || ||||||||||| || ||
Sbjct: 2292 gaacccagctgcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaa 2233

                                                                        
Query: 404  tcccagagccaaaattgcatctttgttggccataaagttatccctccagcgtatcagcgt 463
            |||||| | |   ||  | ||| |||| ||||| ||||| |||| |||||||||||||||
Sbjct: 2232 tcccagggactttatctcttctctgttagccatgaagttgtcccgccagcgtatcagcgt 2173

                                                     
Query: 464  cgggtagtaatggtatccgatgttctcaacctgctcgatgc 504
             |||||||| ||||| || || ||||| |  ||||||||||
Sbjct: 2172 ggggtagtagtggtacccaatattctccaagtgctcgatgc 2132
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                            
Query: 521      ggacatggcagacgtgatccgggccaaggaaggaaggcaaccccctggaaagatgtattc 580
                ||||||||| || || ||||| | |||||| |||||||||||||| ||||| ||||||||
Sbjct: 17064961 ggacatggcggatgttatccgagacaaggatggaaggcaacccccaggaaatatgtattc 17064902

                                                                            
Query: 581      ctttatgaagtctgaacttctcctgtattcctcataccgttcttctggaatcgatataaa 640
                ||| |||||||||||||| ||||||||||| || ||||||||||| || || || || ||
Sbjct: 17064901 cttgatgaagtctgaactcctcctgtattcttcgtaccgttcttcagggatggagatgaa 17064842

                        
Query: 641      ctggagga 648
                ||||||||
Sbjct: 17064841 ctggagga 17064834



 Score =  107 bits (54), Expect = 5e-20
 Identities = 108/126 (85%)
 Strand = Plus / Minus

                                                                            
Query: 284      cagcttgtcattgccaggtcgcgaaaatacaatctggtaagttccaagcgtccgtgactt 343
                ||||||||| |||||||| || || || |||||||||||  ||||||| || ||||||||
Sbjct: 17066597 cagcttgtcgttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgactt 17066538

                                                                            
Query: 344      gaaaccggccgcgcagtatatgaaataatactcccatacacgaatgaacttgtcgtcaaa 403
                ||| || || ||||||||||||||||| ||||||||||  || ||||||||||| || ||
Sbjct: 17066537 gaacccagctgcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaa 17066478

                      
Query: 404      tcccag 409
                ||||||
Sbjct: 17066477 tcccag 17066472



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                            
Query: 427      tgttggccataaagttatccctccagcgtatcagcgtcgggtagtaatggtatccgatgt 486
                |||| ||||| ||||| |||| ||||||||||||||| |||||||| ||||| || || |
Sbjct: 17066276 tgttagccatgaagttgtcccgccagcgtatcagcgtggggtagtagtggtacccaatat 17066217

                                  
Query: 487      tctcaacctgctcgatgc 504
                |||| |  ||||||||||
Sbjct: 17066216 tctccaagtgctcgatgc 17066199
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>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0016H06
          Length = 148158

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                          
Query: 521    ggacatggcagacgtgatccgggccaaggaaggaaggcaaccccctggaaagatgtattc 580
              ||||||||| || || ||||| | |||||| |||||||||||||| ||||| ||||||||
Sbjct: 144372 ggacatggcggatgttatccgagacaaggatggaaggcaacccccaggaaatatgtattc 144313

                                                                          
Query: 581    ctttatgaagtctgaacttctcctgtattcctcataccgttcttctggaatcgatataaa 640
              ||| |||||||||||||| ||||||||||| || ||||||||||| || || || || ||
Sbjct: 144312 cttgatgaagtctgaactcctcctgtattcttcgtaccgttcttcagggatggagatgaa 144253

                      
Query: 641    ctggagga 648
              ||||||||
Sbjct: 144252 ctggagga 144245



 Score =  107 bits (54), Expect = 5e-20
 Identities = 108/126 (85%)
 Strand = Plus / Minus

                                                                          
Query: 284    cagcttgtcattgccaggtcgcgaaaatacaatctggtaagttccaagcgtccgtgactt 343
              ||||||||| |||||||| || || || |||||||||||  ||||||| || ||||||||
Sbjct: 146008 cagcttgtcgttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgactt 145949

                                                                          
Query: 344    gaaaccggccgcgcagtatatgaaataatactcccatacacgaatgaacttgtcgtcaaa 403
              ||| || || ||||||||||||||||| ||||||||||  || ||||||||||| || ||
Sbjct: 145948 gaacccagctgcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaa 145889

                    
Query: 404    tcccag 409
              ||||||
Sbjct: 145888 tcccag 145883



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                          
Query: 427    tgttggccataaagttatccctccagcgtatcagcgtcgggtagtaatggtatccgatgt 486
              |||| ||||| ||||| |||| ||||||||||||||| |||||||| ||||| || || |
Sbjct: 145687 tgttagccatgaagttgtcccgccagcgtatcagcgtggggtagtagtggtacccaatat 145628

                                
Query: 487    tctcaacctgctcgatgc 504
              |||| |  ||||||||||
Sbjct: 145627 tctccaagtgctcgatgc 145610
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>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0571D04
          Length = 149302

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                         
Query: 521   ggacatggcagacgtgatccgggccaaggaaggaaggcaaccccctggaaagatgtattc 580
             ||||||||| || || ||||| | |||||| |||||||||||||| ||||| ||||||||
Sbjct: 18087 ggacatggcggatgttatccgagacaaggatggaaggcaacccccaggaaatatgtattc 18028

                                                                         
Query: 581   ctttatgaagtctgaacttctcctgtattcctcataccgttcttctggaatcgatataaa 640
             ||| |||||||||||||| ||||||||||| || ||||||||||| || || || || ||
Sbjct: 18027 cttgatgaagtctgaactcctcctgtattcttcgtaccgttcttcagggatggagatgaa 17968

                     
Query: 641   ctggagga 648
             ||||||||
Sbjct: 17967 ctggagga 17960



 Score =  107 bits (54), Expect = 5e-20
 Identities = 108/126 (85%)
 Strand = Plus / Minus

                                                                         
Query: 284   cagcttgtcattgccaggtcgcgaaaatacaatctggtaagttccaagcgtccgtgactt 343
             ||||||||| |||||||| || || || |||||||||||  ||||||| || ||||||||
Sbjct: 19723 cagcttgtcgttgccaggccgagacaacacaatctggtagtttccaagtgtacgtgactt 19664

                                                                         
Query: 344   gaaaccggccgcgcagtatatgaaataatactcccatacacgaatgaacttgtcgtcaaa 403
             ||| || || ||||||||||||||||| ||||||||||  || ||||||||||| || ||
Sbjct: 19663 gaacccagctgcgcagtatatgaaatagtactcccatatgcggatgaacttgtcatcgaa 19604

                   
Query: 404   tcccag 409
             ||||||
Sbjct: 19603 tcccag 19598



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 427   tgttggccataaagttatccctccagcgtatcagcgtcgggtagtaatggtatccgatgt 486
             |||| ||||| ||||| |||| ||||||||||||||| |||||||| ||||| || || |
Sbjct: 19402 tgttagccatgaagttgtcccgccagcgtatcagcgtggggtagtagtggtacccaatat 19343

                               
Query: 487   tctcaacctgctcgatgc 504
             |||| |  ||||||||||
Sbjct: 19342 tctccaagtgctcgatgc 19325
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 118/142 (83%)
 Strand = Plus / Minus

                                                                           
Query: 504     cagagccttgacgcagcggacatggcagacgtgatccgggccaaggaaggaaggcaaccc 563
               ||||||||||| ||||| ||||||||||| || ||||| | ||  ||||||||||| || 
Sbjct: 9538811 cagagccttgatgcagcagacatggcagatgttatccgagtcagagaaggaaggcatcca 9538752

                                                                           
Query: 564     cctggaaagatgtattcctttatgaagtctgaacttctcctgtattcctcataccgttct 623
               || || || |||||||| || || |||||||| ||||||| ||| || ||||||||||| 
Sbjct: 9538751 ccagggaatatgtattctttaataaagtctgagcttctccggtactcatcataccgttcc 9538692

                                     
Query: 624     tctggaatcgatataaactgga 645
               || ||||| || ||||||||||
Sbjct: 9538691 tccggaattgagataaactgga 9538670



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                           
Query: 345     aaaccggccgcgcagtatatgaaataatactcccatacacgaatgaacttgtcgtcaaat 404
               |||||||| ||||||||||||||||| |||||||||  |||||||||||| || ||||| 
Sbjct: 9539479 aaaccggctgcgcagtatatgaaatagtactcccatgtacgaatgaacttctcatcaaag 9539420

                              
Query: 405     cccagagccaaaatt 419
               ||||| |||||||||
Sbjct: 9539419 cccagggccaaaatt 9539405



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                           
Query: 423     tctttgttggccataaagttatccctccagcgtatcagcgtcgggtagtaatggtatccg 482
               ||||| |||||||| ||||| ||||||||||||||||| || |  || |||||||| || 
Sbjct: 9538995 tctttattggccatgaagttgtccctccagcgtatcagagttgtataataatggtaccca 9538936

                                     
Query: 483     atgttctcaacctgctcgatgc 504
               || |||||||| ||||| ||||
Sbjct: 9538935 atattctcaacgtgctcaatgc 9538914
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 118/142 (83%)
 Strand = Plus / Minus

                                                                           
Query: 504     cagagccttgacgcagcggacatggcagacgtgatccgggccaaggaaggaaggcaaccc 563
               ||||||||||| ||||| ||||||||||| || ||||| | ||  ||||||||||| || 
Sbjct: 9538696 cagagccttgatgcagcagacatggcagatgttatccgagtcagagaaggaaggcatcca 9538637

                                                                           
Query: 564     cctggaaagatgtattcctttatgaagtctgaacttctcctgtattcctcataccgttct 623
               || || || |||||||| || || |||||||| ||||||| ||| || ||||||||||| 
Sbjct: 9538636 ccagggaatatgtattctttaataaagtctgagcttctccggtactcatcataccgttcc 9538577

                                     
Query: 624     tctggaatcgatataaactgga 645
               || ||||| || ||||||||||
Sbjct: 9538576 tccggaattgagataaactgga 9538555



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                           
Query: 345     aaaccggccgcgcagtatatgaaataatactcccatacacgaatgaacttgtcgtcaaat 404
               |||||||| ||||||||||||||||| |||||||||  |||||||||||| || ||||| 
Sbjct: 9539364 aaaccggctgcgcagtatatgaaatagtactcccatgtacgaatgaacttctcatcaaag 9539305

                              
Query: 405     cccagagccaaaatt 419
               ||||| |||||||||
Sbjct: 9539304 cccagggccaaaatt 9539290



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                           
Query: 423     tctttgttggccataaagttatccctccagcgtatcagcgtcgggtagtaatggtatccg 482
               ||||| |||||||| ||||| ||||||||||||||||| || |  || |||||||| || 
Sbjct: 9538880 tctttattggccatgaagttgtccctccagcgtatcagagttgtataataatggtaccca 9538821

                                     
Query: 483     atgttctcaacctgctcgatgc 504
               || |||||||| ||||| ||||
Sbjct: 9538820 atattctcaacgtgctcaatgc 9538799
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>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 165137

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 118/142 (83%)
 Strand = Plus / Minus

                                                                        
Query: 504  cagagccttgacgcagcggacatggcagacgtgatccgggccaaggaaggaaggcaaccc 563
            ||||||||||| ||||| ||||||||||| || ||||| | ||  ||||||||||| || 
Sbjct: 2122 cagagccttgatgcagcagacatggcagatgttatccgagtcagagaaggaaggcatcca 2063

                                                                        
Query: 564  cctggaaagatgtattcctttatgaagtctgaacttctcctgtattcctcataccgttct 623
            || || || |||||||| || || |||||||| ||||||| ||| || ||||||||||| 
Sbjct: 2062 ccagggaatatgtattctttaataaagtctgagcttctccggtactcatcataccgttcc 2003

                                  
Query: 624  tctggaatcgatataaactgga 645
            || ||||| || ||||||||||
Sbjct: 2002 tccggaattgagataaactgga 1981



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 345  aaaccggccgcgcagtatatgaaataatactcccatacacgaatgaacttgtcgtcaaat 404
            |||||||| ||||||||||||||||| |||||||||  |||||||||||| || ||||| 
Sbjct: 2790 aaaccggctgcgcagtatatgaaatagtactcccatgtacgaatgaacttctcatcaaag 2731

                           
Query: 405  cccagagccaaaatt 419
            ||||| |||||||||
Sbjct: 2730 cccagggccaaaatt 2716



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                        
Query: 423  tctttgttggccataaagttatccctccagcgtatcagcgtcgggtagtaatggtatccg 482
            ||||| |||||||| ||||| ||||||||||||||||| || |  || |||||||| || 
Sbjct: 2306 tctttattggccatgaagttgtccctccagcgtatcagagttgtataataatggtaccca 2247

                                  
Query: 483  atgttctcaacctgctcgatgc 504
            || |||||||| ||||| ||||
Sbjct: 2246 atattctcaacgtgctcaatgc 2225
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>gb|AY574038.1| Gossypium hirsutum cyclopropane fatty acid synthase (CPA-FAS-3) mRNA,
            complete cds
          Length = 2912

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 570  aagatgtattcctttatgaagtctgaacttctcctgtattcctcataccgttcttctgga 629
            |||||||||||||| ||||| || || |||| ||||||||| |  |||||||| ||||| 
Sbjct: 2381 aagatgtattccttgatgaaatccgagcttcgcctgtattcattgtaccgttcctctggt 2322

                          
Query: 630  atcgatataaactg 643
            || ||||| |||||
Sbjct: 2321 attgatatgaactg 2308
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>ref|NM_113256.3| Arabidopsis thaliana cyclopropane-fatty-acyl-phospholipid synthase/
            oxidoreductase AT3G23530 mRNA, complete cds
          Length = 3148

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 94/117 (80%)
 Strand = Plus / Minus

                                                                        
Query: 483  atgttctcaacctgctcgatgcagagccttgacgcagcggacatggcagacgtgatccgg 542
            ||||||||||| || |||||||| ||||| || | || ||||||||| |  ||||  | |
Sbjct: 2681 atgttctcaacatgttcgatgcatagcctagaagaagaggacatggctgtagtgactctg 2622

                                                                     
Query: 543  gccaaggaaggaaggcaaccccctggaaagatgtattcctttatgaagtctgaactt 599
            || || ||||||||||| || || || || |||||||| || ||||| |||||||||
Sbjct: 2621 gctaaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctgaactt 2565
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>gb|BT000811.1| Arabidopsis thaliana At3g23520 mRNA sequence
          Length = 3084

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 94/117 (80%)
 Strand = Plus / Minus

                                                                        
Query: 483  atgttctcaacctgctcgatgcagagccttgacgcagcggacatggcagacgtgatccgg 542
            ||||||||||| || |||||||| ||||| || | || ||||||||| |  ||||  | |
Sbjct: 2655 atgttctcaacatgttcgatgcatagcctagaagaagaggacatggctgtagtgactctg 2596

                                                                     
Query: 543  gccaaggaaggaaggcaaccccctggaaagatgtattcctttatgaagtctgaactt 599
            || || ||||||||||| || || || || |||||||| || ||||| |||||||||
Sbjct: 2595 gctaaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctgaactt 2539
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>gb|AY065013.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, complete cds
          Length = 3149

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 94/117 (80%)
 Strand = Plus / Minus

                                                                        
Query: 483  atgttctcaacctgctcgatgcagagccttgacgcagcggacatggcagacgtgatccgg 542
            ||||||||||| || |||||||| ||||| || | || ||||||||| |  ||||  | |
Sbjct: 2681 atgttctcaacatgttcgatgcatagcctagaagaagaggacatggctgtagtgactctg 2622

                                                                     
Query: 543  gccaaggaaggaaggcaaccccctggaaagatgtattcctttatgaagtctgaactt 599
            || || ||||||||||| || || || || |||||||| || ||||| |||||||||
Sbjct: 2621 gctaaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctgaactt 2565
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>gb|AY064962.1| Arabidopsis thaliana AT3g23510/MEE5_5 mRNA, complete cds
          Length = 2988

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 94/117 (80%)
 Strand = Plus / Minus

                                                                        
Query: 483  atgttctcaacctgctcgatgcagagccttgacgcagcggacatggcagacgtgatccgg 542
            ||||||||||| || |||||||| ||||| || | || ||||||||| |  ||||  | |
Sbjct: 2600 atgttctcaacatgttcgatgcatagcctagaagaagaggacatggctgtagtgactctg 2541

                                                                     
Query: 543  gccaaggaaggaaggcaaccccctggaaagatgtattcctttatgaagtctgaactt 599
            || || ||||||||||| || || || || |||||||| || ||||| |||||||||
Sbjct: 2540 gctaaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctgaactt 2484
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>gb|BT006344.1| Arabidopsis thaliana At3g23510/MEE5_5 gene, complete cds
          Length = 2604

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 94/117 (80%)
 Strand = Plus / Minus

                                                                        
Query: 483  atgttctcaacctgctcgatgcagagccttgacgcagcggacatggcagacgtgatccgg 542
            ||||||||||| || |||||||| ||||| || | || ||||||||| |  ||||  | |
Sbjct: 2357 atgttctcaacatgttcgatgcatagcctagaagaagaggacatggctgtagtgactctg 2298

                                                                     
Query: 543  gccaaggaaggaaggcaaccccctggaaagatgtattcctttatgaagtctgaactt 599
            || || ||||||||||| || || || || |||||||| || ||||| |||||||||
Sbjct: 2297 gctaaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctgaactt 2241
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>dbj|AK176391.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL24-10-D10
          Length = 2986

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 94/117 (80%)
 Strand = Plus / Minus

                                                                        
Query: 483  atgttctcaacctgctcgatgcagagccttgacgcagcggacatggcagacgtgatccgg 542
            ||||||||||| || |||||||| ||||| || | || ||||||||| |  ||||  | |
Sbjct: 2589 atgttctcaacatgttcgatgcatagcctagaagaagaggacatggctgtagtgactctg 2530

                                                                     
Query: 543  gccaaggaaggaaggcaaccccctggaaagatgtattcctttatgaagtctgaactt 599
            || || ||||||||||| || || || || |||||||| || ||||| |||||||||
Sbjct: 2529 gctaaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctgaactt 2473
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>gb|BT001134.1| Arabidopsis thaliana At3g23510/MEE5_5 mRNA, complete cds
          Length = 2604

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 94/117 (80%)
 Strand = Plus / Minus

                                                                        
Query: 483  atgttctcaacctgctcgatgcagagccttgacgcagcggacatggcagacgtgatccgg 542
            ||||||||||| || |||||||| ||||| || | || ||||||||| |  ||||  | |
Sbjct: 2357 atgttctcaacatgttcgatgcatagcctagaagaagaggacatggctgtagtgactctg 2298

                                                                     
Query: 543  gccaaggaaggaaggcaaccccctggaaagatgtattcctttatgaagtctgaactt 599
            || || ||||||||||| || || || || |||||||| || ||||| |||||||||
Sbjct: 2297 gctaaagaaggaaggcatccaccagggaatatgtattctttaatgaaatctgaactt 2241
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>gb|AC131036.4| Mus musculus chromosome 5, clone RP23-358D12, complete sequence
          Length = 197112

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 182   gcatgctattatatgtaggtat 203
             ||||||||||||||||||||||
Sbjct: 46074 gcatgctattatatgtaggtat 46095
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>gb|AC163275.4| Mus musculus chromosome 5, clone RP23-458G12, complete sequence
          Length = 176643

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 182   gcatgctattatatgtaggtat 203
             ||||||||||||||||||||||
Sbjct: 91048 gcatgctattatatgtaggtat 91069
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>dbj|AK083447.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030016M01
            product:unclassifiable, full insert sequence
          Length = 2177

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 182  gcatgctattatatgtaggtat 203
            ||||||||||||||||||||||
Sbjct: 1829 gcatgctattatatgtaggtat 1850
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>gb|AY342401.1| Homo sapiens vitamin D (1,25-dihydroxyvitamin D3) receptor (VDR) gene,
             complete cds
          Length = 67076

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 536   gatccgggccaaggaaggaaggcaacccc 564
             |||| ||||||||| ||||||||||||||
Sbjct: 49623 gatcagggccaaggtaggaaggcaacccc 49651
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>gb|AC004466.1| Homo sapiens 12 PAC RPCI5-1057I20 (Roswell Park Cancer Institute Human
             PAC library) complete sequence
          Length = 122186

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 536   gatccgggccaaggaaggaaggcaacccc 564
             |||| ||||||||| ||||||||||||||
Sbjct: 33820 gatcagggccaaggtaggaaggcaacccc 33848
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>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03,
             complete sequence
          Length = 146278

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   gcgaaggggttatcggtgtt 280
             ||||||||||||||||||||
Sbjct: 37562 gcgaaggggttatcggtgtt 37543
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>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0109A13,
              complete sequence
          Length = 134258

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    gcgaaggggttatcggtgtt 280
              ||||||||||||||||||||
Sbjct: 112989 gcgaaggggttatcggtgtt 112970
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>emb|AL139137.15| Human DNA sequence from clone RP11-58O13 on chromosome 1, complete
             sequence
          Length = 137269

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   tggtcaatattttcacacac 135
             ||||||||||||||||||||
Sbjct: 66155 tggtcaatattttcacacac 66174
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>gb|AC092931.8| Homo sapiens 3 BAC RP11-131O20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152737

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   gcagtatatgaaataatact 375
             ||||||||||||||||||||
Sbjct: 23939 gcagtatatgaaataatact 23920
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>emb|AL050322.13|HSJ727I10 Human DNA sequence from clone RP4-727I10 on chromosome 20 Contains a
             novel gene, ESTs, STSs and GSSs, complete sequence
          Length = 114152

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   tgcatctttgttggccataa 438
             ||||||||||||||||||||
Sbjct: 46097 tgcatctttgttggccataa 46078
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>emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chromosome 11 Contains
            the genes for olfactory receptor MOR135-14 and -3 , two
            olfactory receptor MOR135 pseudogenes, the gene for a
            novel olfactory receptor family MOR135 member, a zinc
            finger protein pseudogene, the 5' end of the gene for a
            novel KRAB box domain containing protein and a CpG
            island, complete sequence
          Length = 194873

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 559  aaccccctggaaagatgtat 578
            ||||||||||||||||||||
Sbjct: 8037 aaccccctggaaagatgtat 8056
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>emb|AL831789.6| Zebrafish DNA sequence from clone CH211-207O21 in linkage group 14
              Contains the zebrafish fgf24 gene for fibroblast growth
              factor 24, a novel gene for a RING finger protein, the
              lbx1h gene for lady bird-like homeobox 1 homolog,
              (Drosophila) and eight CpG islands, complete sequence
          Length = 217649

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    atattttcacacactcctat 141
              ||||||||||||||||||||
Sbjct: 151936 atattttcacacactcctat 151917
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>gb|AC093795.3| Homo sapiens BAC clone RP11-299P3 from 4, complete sequence
          Length = 183917

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    gcagtatatgaaataatact 375
              ||||||||||||||||||||
Sbjct: 106009 gcagtatatgaaataatact 106028
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 261      gcgaaggggttatcggtgtt 280
                ||||||||||||||||||||
Sbjct: 27286237 gcgaaggggttatcggtgtt 27286218
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 261     gcgaaggggttatcggtgtt 280
               ||||||||||||||||||||
Sbjct: 6588630 gcgaaggggttatcggtgtt 6588649
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 261      gcgaaggggttatcggtgtt 280
                ||||||||||||||||||||
Sbjct: 15329664 gcgaaggggttatcggtgtt 15329683



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 261     gcgaaggggttatcggtgtt 280
               ||||||||||||||||||||
Sbjct: 1774526 gcgaaggggttatcggtgtt 1774545
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 261      gcgaaggggttatcggtgtt 280
                ||||||||||||||||||||
Sbjct: 14886647 gcgaaggggttatcggtgtt 14886628
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 261      gcgaaggggttatcggtgtt 280
                ||||||||||||||||||||
Sbjct: 17714711 gcgaaggggttatcggtgtt 17714730
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>gb|AC003036.1|AC003036 Homo sapiens Xp22 PAC RPCI1-108M6 (Roswell Park Cancer Center PAC
             library) complete sequence
          Length = 123203

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 602   cctgtattcctcataccgtt 621
             ||||||||||||||||||||
Sbjct: 97439 cctgtattcctcataccgtt 97458
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>ref|NM_001007158.1| Danio rerio polycomb group ring finger 1 (pcgf1), mRNA
          Length = 878

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 atattttcacacactcctat 141
           ||||||||||||||||||||
Sbjct: 807 atattttcacacactcctat 788
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>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0062G05
          Length = 152802

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    gcgaaggggttatcggtgtt 280
              ||||||||||||||||||||
Sbjct: 115295 gcgaaggggttatcggtgtt 115314
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>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0009H02
          Length = 155388

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   gcgaaggggttatcggtgtt 280
             ||||||||||||||||||||
Sbjct: 56887 gcgaaggggttatcggtgtt 56906
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>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1151D08
          Length = 152824

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   gcgaaggggttatcggtgtt 280
             ||||||||||||||||||||
Sbjct: 87300 gcgaaggggttatcggtgtt 87319
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>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0021C10
          Length = 119527

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   gcgaaggggttatcggtgtt 280
             ||||||||||||||||||||
Sbjct: 70725 gcgaaggggttatcggtgtt 70744
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>dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, map 22, complete
              sequences
          Length = 224098

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    cgaaggggttatcggtgttg 281
              ||||||||||||||||||||
Sbjct: 124824 cgaaggggttatcggtgttg 124805
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>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1790_D02
          Length = 162928

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   gcgaaggggttatcggtgtt 280
             ||||||||||||||||||||
Sbjct: 15240 gcgaaggggttatcggtgtt 15259
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>emb|CR846102.12| Zebrafish DNA sequence from clone DKEY-50I13 in linkage group 14,
              complete sequence
          Length = 174004

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 2      aggagaaaaatgttgagtaagaaaacct 29
              |||||||||||  |||||||||||||||
Sbjct: 128916 aggagaaaaattctgagtaagaaaacct 128943
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 67      atgaatcaatcaacgaatca 86
               ||||||||||||||||||||
Sbjct: 1346963 atgaatcaatcaacgaatca 1346982


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,138,941
Number of Sequences: 3902068
Number of extensions: 6138941
Number of successful extensions: 93905
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 93623
Number of HSP's gapped (non-prelim): 282
length of query: 648
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 625
effective length of database: 17,143,297,704
effective search space: 10714561065000
effective search space used: 10714561065000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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