| Clone Name | rbags38n22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | GIDRP_HUMAN (Q7Z5L2) Growth inhibition and differentiation-relat... | 31 | 3.3 | 2 | BTD_FUGRU (Q8AV84) Biotinidase precursor (EC 3.5.1.12) | 30 | 4.3 | 3 | C12E1_DROME (Q9VGZ0) Probable cytochrome P450 12e1, mitochondria... | 30 | 5.7 | 4 | ACOX_PICPA (Q9Y7B1) Acyl-coenzyme A oxidase (EC 1.3.3.6) (Acyl-C... | 29 | 9.7 |
|---|
>GIDRP_HUMAN (Q7Z5L2) Growth inhibition and differentiation-related protein 88| (Putative mitochondrial space protein 32.1) Length = 792 Score = 30.8 bits (68), Expect = 3.3 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = -2 Query: 565 DDLHVLHEDTEASVLAANTRFYNAFKN-GDFT 473 D+LHV HE + +VLA T + FKN GD T Sbjct: 341 DELHVKHEPPDTAVLAHETHRDSGFKNVGDIT 372
>BTD_FUGRU (Q8AV84) Biotinidase precursor (EC 3.5.1.12)| Length = 504 Score = 30.4 bits (67), Expect = 4.3 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = -3 Query: 210 MAHGIFAFTMLHTSKNKMLTLSGGLCCILHSRWRYMPSWVILYMTGIY 67 M + F F +L+ + +M +G CC L RW LY G + Sbjct: 354 MMYDPFTFALLNATDGEMRVCNGTFCCYLQYRWVTETGRTELYALGAF 401
>C12E1_DROME (Q9VGZ0) Probable cytochrome P450 12e1, mitochondrial precursor (EC| 1.14.-.-) (CYPXIIE1) Length = 514 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -2 Query: 451 KGDYVYVVHPGAGRISGYDVVLQSWEMVCNADYEFPLNIELKNIEVHV 308 +G +Y + PG R +DVVL + +V D N ++ N+E V Sbjct: 373 EGIRMYPIGPGTLRRMPHDVVLSGYRVVAGTDVGIAANYQMANMEQFV 420
>ACOX_PICPA (Q9Y7B1) Acyl-coenzyme A oxidase (EC 1.3.3.6) (Acyl-CoA oxidase)| Length = 719 Score = 29.3 bits (64), Expect = 9.7 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 12/89 (13%) Frame = -2 Query: 454 AKGDYVYVVHPGAGRISGYDVVLQSWE------------MVCNADYEFPLNIELKNIEVH 311 A G + Y + G G+ VV +WE ++CN L K E Sbjct: 423 ACGGHGYSSYSGFGKAYNDWVVQCTWEGDNNILASNAGRLLCN------LLSSCKKKEKK 476 Query: 310 VRGDLGYVTCLELVKTKGKSWGKQIATNV 224 ++GDL Y+ + + + W KQ TN+ Sbjct: 477 IKGDLSYLNGISNIDKEAICWNKQSMTNL 505 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,372,606 Number of Sequences: 219361 Number of extensions: 2236922 Number of successful extensions: 5861 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 5655 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5861 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)