ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38n19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial pre... 119 9e-27
2MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial pre... 114 3e-25
3MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial pre... 112 1e-24
4MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial pre... 110 2e-24
5MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precu... 110 2e-24
6MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial pre... 109 6e-24
7PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (P... 100 4e-21
8MPCP_YEAST (P23641) Mitochondrial phosphate carrier protein (Pho... 72 1e-12
9MFRN_CAEBR (Q620A6) Mitoferrin 35 0.17
10YQ51_CAEEL (Q09461) Putative mitochondrial carrier C16C10.1 32 1.1
11SRFAA_BACSU (P27206) Surfactin synthetase subunit 1 32 1.1
12MFRN_CAEEL (Q23125) Mitoferrin 32 1.1
13LEP4_MYXXA (O30387) Type 4 prepilin-like proteins leader peptide... 32 1.5
14ESPC_ECO27 (Q9EZE7) Serine protease espC precursor (EC 3.4.21.-)... 32 1.5
15TENR_CHICK (Q00546) Tenascin-R precursor (TN-R) (Restrictin) 31 2.5
16PALF_KLULA (Q6CTM7) pH-response regulator protein palF/RIM8 30 4.3
17KUP_XANCP (Q8P6E6) Probable potassium transport system protein kup 30 4.3
18M1_DHVI1 (Q01479) Matrix protein 1 (M1) 30 4.3
19MFRN2_MOUSE (Q8R0Z5) Mitoferrin-2 (Mitochondrial iron transporte... 30 5.6
20FA57B_MOUSE (Q7TNV1) Protein FAM57B 30 5.6
21HDA4_CAEBR (Q613L4) Histone deacetylase 4 30 5.6
22ACHX_ONCVO (P54247) Acetylcholine receptor protein, non-alpha ch... 30 5.6
23ACHA3_HUMAN (P32297) Neuronal acetylcholine receptor protein, al... 30 7.3
24YG5F_YEAST (P53320) Putative mitochondrial carrier YGR257C 30 7.3
25Y076_MYCPN (P75041) Hypothetical protein MG061 homolog 1 (R02_or... 30 7.3
26TM86A_BOVIN (Q3MHQ7) Transmembrane protein 86A 29 9.6
27NU4M_ACACA (Q37375) NADH-ubiquinone oxidoreductase chain 4 (EC 1... 29 9.6
28TM86A_MOUSE (Q9D8N3) Transmembrane protein 86A 29 9.6
29C43BP_BOVIN (Q9GKI7) Goodpasture antigen-binding protein (EC 2.7... 29 9.6

>MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial precursor|
           (Phosphate transport protein) (PTP)
          Length = 349

 Score =  119 bits (297), Expect = 9e-27
 Identities = 64/108 (59%), Positives = 76/108 (70%)
 Frame = -2

Query: 615 PVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGMLG 436
           P P+AECSK  QL ++FA GYIAGVFCAIVSHPAD +VS LN  K ATVG  V K+G  G
Sbjct: 236 PKPRAECSKGEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNQDKTATVGSIVGKLGFAG 295

Query: 435 LFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 292
           ++ +GL  RI+MIGTLT  QW IYDA KV + +P     PP A + ES
Sbjct: 296 VW-KGLGPRIIMIGTLTALQWFIYDAVKVWLRMP----RPPPAEMPES 338



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>MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial precursor (PTP)|
          Length = 340

 Score =  114 bits (284), Expect = 3e-25
 Identities = 60/109 (55%), Positives = 73/109 (66%)
 Frame = -2

Query: 615 PVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGMLG 436
           P P+AECSK+ QL ++F  GYIAGVFCAIVSHPAD +VS LN    AT G  +KK+G  G
Sbjct: 229 PKPRAECSKAEQLVVTFVAGYIAGVFCAIVSHPADTVVSKLNQDSQATAGGILKKLGFAG 288

Query: 435 LFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEESA 289
           ++ +GL  RI+MIGTLT  QW IYD+ KV + LP     PP  P    A
Sbjct: 289 VW-KGLVPRIIMIGTLTALQWFIYDSVKVALNLPRP--PPPEMPASLKA 334



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>MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 362

 Score =  112 bits (279), Expect = 1e-24
 Identities = 57/108 (52%), Positives = 75/108 (69%)
 Frame = -2

Query: 615 PVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGMLG 436
           P P++ECSK  QL ++F  GYIAGVFCAIVSHPAD++VS LN  KG++  + +K++G  G
Sbjct: 251 PKPRSECSKPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSSASEVLKRLGFRG 310

Query: 435 LFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 292
           ++ +GL  RI+MIGTLT  QW IYD+ KV   LP     PP   + ES
Sbjct: 311 VW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 353



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>MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 357

 Score =  110 bits (276), Expect = 2e-24
 Identities = 56/108 (51%), Positives = 75/108 (69%)
 Frame = -2

Query: 615 PVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGMLG 436
           P P++EC+K+ QL ++F  GYIAGVFCAIVSHPAD++VS LN  KG+T    ++++G  G
Sbjct: 246 PKPRSECTKAEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSTASQVLQRLGFRG 305

Query: 435 LFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 292
           ++ +GL  RI+MIGTLT  QW IYD+ KV   LP     PP   + ES
Sbjct: 306 VW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 348



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>MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 356

 Score =  110 bits (276), Expect = 2e-24
 Identities = 56/108 (51%), Positives = 75/108 (69%)
 Frame = -2

Query: 615 PVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGMLG 436
           P P++EC+K+ QL ++F  GYIAGVFCAIVSHPAD++VS LN  KG+T    ++++G  G
Sbjct: 245 PKPRSECTKAEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSTASQVLQRLGFRG 304

Query: 435 LFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 292
           ++ +GL  RI+MIGTLT  QW IYD+ KV   LP     PP   + ES
Sbjct: 305 VW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 347



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>MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 362

 Score =  109 bits (273), Expect = 6e-24
 Identities = 57/108 (52%), Positives = 74/108 (68%)
 Frame = -2

Query: 615 PVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGMLG 436
           P P++ECSK  QL ++F  GYIAGVFCAIVSHPAD++VS LN  KG++    +K++G  G
Sbjct: 251 PKPRSECSKPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSSASLVLKRLGFKG 310

Query: 435 LFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEES 292
           ++ +GL  RI+MIGTLT  QW IYD+ KV   LP     PP   + ES
Sbjct: 311 VW-KGLFARIIMIGTLTALQWFIYDSVKVYFRLP----RPPPPEMPES 353



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>PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (Phosphate|
           transport protein 2) (PTP 2) (mPic 2) (Pi carrier
           isoform 2)
          Length = 300

 Score =  100 bits (248), Expect = 4e-21
 Identities = 54/103 (52%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
 Frame = -2

Query: 615 PVPKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAV------K 454
           P  K E +   Q+ +SF GGY+AG+ CA VSHPAD +VS +N+ + A    +V      +
Sbjct: 199 PKKKEEMNALQQISVSFVGGYLAGILCAAVSHPADVMVSKINSERKANESMSVASKRIYQ 258

Query: 453 KIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTG 325
           KIG  GL+  GL +RIVMIGTLT  QW IYD+FK  VGLPTTG
Sbjct: 259 KIGFTGLWN-GLMVRIVMIGTLTSFQWLIYDSFKAYVGLPTTG 300



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>MPCP_YEAST (P23641) Mitochondrial phosphate carrier protein (Phosphate|
           transport protein) (PTP) (mPic 1) (Mitochondrial import
           receptor) (p32)
          Length = 311

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
 Frame = -2

Query: 609 PKAECSKSSQLGISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGA----TVG---DAVKK 451
           PK + S +S   ++   G  AG+  AIVS PAD L+S +N  K A    TVG      K+
Sbjct: 204 PKEKLSSTSTTLLNLLSGLTAGLAAAIVSQPADTLLSKVNKTKKAPGQSTVGLLAQLAKQ 263

Query: 450 IGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTT 328
           +G  G F  GLP R+VM+GTLT  Q+GIY + K  +G P T
Sbjct: 264 LGFFGSFA-GLPTRLVMVGTLTSLQFGIYGSLKSTLGCPPT 303



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>MFRN_CAEBR (Q620A6) Mitoferrin|
          Length = 311

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 22/96 (22%)
 Frame = -2

Query: 564 AGGYIAGVFCAIVSHPADNLVSFLNNAKGAT------------------VGDAVKKI--- 448
           AGG +AG   A V+ P D + + LN  + A                   + DAV+ I   
Sbjct: 210 AGG-LAGGLAAAVTTPMDCVKTVLNTQQAAEADPSNRRIFLKARYRYRGISDAVRTIYSQ 268

Query: 447 -GMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMV 343
            GM G F+ GL  R++     T   W +Y+ FK M+
Sbjct: 269 RGMAG-FSCGLQARVIFQVPATALSWSVYELFKFML 303



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>YQ51_CAEEL (Q09461) Putative mitochondrial carrier C16C10.1|
          Length = 360

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
 Frame = -2

Query: 573 ISFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGM----------LGLFTR 424
           +SF  G  AGV  +I +HP D + +      G ++ D  K I            +  F+ 
Sbjct: 270 VSFVSGAAAGVVASIFTHPFDVIKTNCQIRIGGSIDDMNKSITTVIKDMYHSRGISAFSS 329

Query: 423 GLPLRIVMIGTLTGAQWGIYDAFKVM 346
           GL  R+V +          Y+ FK +
Sbjct: 330 GLVPRLVKVSPSCAIMISFYEYFKFL 355



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>SRFAA_BACSU (P27206) Surfactin synthetase subunit 1|
          Length = 3588

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = +1

Query: 325  AGGRESHHNFKRIIDSPLSTSKSTN---HDDTKGEPSGEKAQHANLLNSIAHCSTLGIVE 495
            A   ES+H   R +  PL ++   N      T G P G    HAN+L ++   + L I E
Sbjct: 1626 ADEEESYHADARNLALPLDSAAMANLTYTSGTTGTPKGNIVTHANILRTVKETNYLSITE 1685

Query: 496  E 498
            +
Sbjct: 1686 Q 1686



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>MFRN_CAEEL (Q23125) Mitoferrin|
          Length = 312

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 22/96 (22%)
 Frame = -2

Query: 564 AGGYIAGVFCAIVSHPADNLVSFLNNAKGAT------------------VGDAVKKI--- 448
           AGG +AG   A ++ P D + + LN  + A                   + DAV+ I   
Sbjct: 211 AGG-LAGGLAAALTTPMDCVKTVLNTQQAAEADPANRRIFLQARYRYRGISDAVRTIYSQ 269

Query: 447 -GMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMV 343
            G+ G F+ GL  R++     T   W +Y+ FK M+
Sbjct: 270 RGLSG-FSCGLQARVIFQVPATALSWSVYELFKFML 304



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>LEP4_MYXXA (O30387) Type 4 prepilin-like proteins leader peptide-processing|
           enzyme [Includes: Leader peptidase (EC 3.4.23.43)
           (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)]
          Length = 335

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -2

Query: 285 LIFAAMTMYSWLWLLVDGTVSVTCLAPKIFCYCSRWLLSLS 163
           L FA +  + W + LV   V V+ L P  F     W+L LS
Sbjct: 95  LFFACLRRFGWTYELVPALVLVSLLVPLAFIDLDHWILPLS 135



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>ESPC_ECO27 (Q9EZE7) Serine protease espC precursor (EC 3.4.21.-)|
           (EPEC-secreted protein C)
          Length = 1305

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 7/121 (5%)
 Frame = +1

Query: 274 SKNQSS*FLYRSNWWSTAGGRESHHNF-------KRIIDSPLSTSKSTNHDDTKGEPSGE 432
           S N  S ++Y     S +G  E +H F       + I+D  +  +   N  +++    G 
Sbjct: 508 SVNNQSNYMYHG---SVSGNTEINHQFDTQKNNSRLILDGNVDITNDINIKNSQLTMQGH 564

Query: 433 KAQHANLLNSIAHCSTLGIVEERDKVVSRMRNNSTENTGNVATSKADTQXXXXXXXXXXN 612
              HA        C   G++ E+D V    +  ++ N  N    K + Q          N
Sbjct: 565 ATSHAVFREGGVTCMLPGVICEKDYVSGIQQQENSANKNNNTDYKTNNQVSSFEQPDWEN 624

Query: 613 R 615
           R
Sbjct: 625 R 625



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>TENR_CHICK (Q00546) Tenascin-R precursor (TN-R) (Restrictin)|
          Length = 1353

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -1

Query: 382 CSVGNL*CV*SYGGTP-DHRRCSTSCSGRGISLIDFCCYDDVFLVVVIGGWDC 227
           C  G   C   Y G      RC  +CSGRG+     C  +D +     GG DC
Sbjct: 275 CDNGTCVCAEGYAGEDCGWLRCPNACSGRGVCQDGLCICEDGY-----GGQDC 322



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>PALF_KLULA (Q6CTM7) pH-response regulator protein palF/RIM8|
          Length = 572

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 114 GGQKKAYFACLMSSSHLIETITICYNNKRFWVLNK*LIQSHPPI 245
           GG+ K  F+C ++  +L+ +I     + R+WV  +   Q  PPI
Sbjct: 133 GGEHKFPFSCKINGKNLVSSIDFKKGSIRYWVQAELHAQKTPPI 176



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>KUP_XANCP (Q8P6E6) Probable potassium transport system protein kup|
          Length = 635

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 419 SPLVKRPNMPIFLTASPTVAPLALLRN 499
           +P  + P M +FLTA P V P AL+ N
Sbjct: 480 APPARVPGMAVFLTADPMVVPHALMHN 506



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>M1_DHVI1 (Q01479) Matrix protein 1 (M1)|
          Length = 270

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = +2

Query: 56  LRSNSLAVLKLIMSSIKLSRGAKKGLFRLLNEFLSSDRDNNHLLQ*QKILGAKQVTDTV 232
           L SN L   K  M+S+K    AK GL  + N   S DR+   +L    IL  + +  TV
Sbjct: 73  LISNRLKGGKYDMNSVKKGYKAKDGLQEISNYISSLDREGKQVLACMLILSTQSIGKTV 131



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>MFRN2_MOUSE (Q8R0Z5) Mitoferrin-2 (Mitochondrial iron transporter 2) (Solute|
           carrier family 25 member 28) (Mitochondrial RNA splicing
           protein 3/4 homolog) (MRS3/4)
          Length = 364

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 14/86 (16%)
 Frame = -2

Query: 558 GYIAGVFCAIVSHPADNLVSFLN---------NAKGATVGDA-----VKKIGMLGLFTRG 421
           G  AG   A  + P D   + LN         N  G   G A     V ++G +  + RG
Sbjct: 268 GACAGAVAAAATTPLDVCKTLLNTQESLALNSNITGHITGMASAFRTVYQVGGVTAYFRG 327

Query: 420 LPLRIVMIGTLTGAQWGIYDAFKVMV 343
           +  R++     T   W +Y+ FK ++
Sbjct: 328 VQARVIYQIPSTAIAWSVYEFFKYLI 353



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>FA57B_MOUSE (Q7TNV1) Protein FAM57B|
          Length = 225

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -3

Query: 557 ATLPVFSVLLFLIRLTTLSRSSTMPRVLQWAMLLRRLACWAFSPEGSP 414
           A LP+ SV + +     L  +  +   L W  L+ R AC  F P GSP
Sbjct: 169 AGLPLLSVPMAIPAHVNLGAALLLAPQLYWFFLICRGACRLFRPRGSP 216



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>HDA4_CAEBR (Q613L4) Histone deacetylase 4|
          Length = 892

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
 Frame = +2

Query: 242 NNHNQEYIVIAAKINQADSSTGATGGAP---PVVGSPTITLNAS 364
           ++ +  + V+ A++ +A SSTG+TGGA    PV+ S +  L A+
Sbjct: 5   SSSSSSFPVVFARMEEASSSTGSTGGAMAGIPVIPSTSAALLAN 48



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>ACHX_ONCVO (P54247) Acetylcholine receptor protein, non-alpha chain (Fragment)|
          Length = 436

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -3

Query: 611 FRRPSAASLPSWVSALLVATLPVFSVLLFLIRLTTLSRSSTMPRVLQW 468
           FRRPS   +P WV  L +  LP    +LF+ R T +     + RV  +
Sbjct: 284 FRRPSTHRMPIWVKWLFLRILP---KILFMRRPTLIKVDEAVRRVADY 328



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>ACHA3_HUMAN (P32297) Neuronal acetylcholine receptor protein, alpha-3 subunit|
           precursor
          Length = 503

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -3

Query: 611 FRRPSAASLPSWVSALLVATLPVFSVLLFLIRLTTLSRSSTMPRVLQWAML 459
           +R P+  ++PSWV  + +  LP    ++F+ R T+   ++  PR L  A L
Sbjct: 328 YRTPTTHTMPSWVKTVFLNLLP---RVMFMTRPTSNEGNAQKPRPLYGAEL 375



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>YG5F_YEAST (P53320) Putative mitochondrial carrier YGR257C|
          Length = 366

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
 Frame = -2

Query: 570 SFAGGYIAGVFCAIVSHPADN-----LVSFLNNA--KGATVGDAVKKI--------GMLG 436
           SFA G I+G+  AI +HP D       +S +NN+  KG      + K         G+  
Sbjct: 271 SFASGCISGMIAAICTHPFDVGKTRWQISMMNNSDPKGGNRSRNMFKFLETIWRTEGLAA 330

Query: 435 LFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVG 340
           L+T GL  R++ I          Y+  K + G
Sbjct: 331 LYT-GLAARVIKIRPSCAIMISSYEISKKVFG 361



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>Y076_MYCPN (P75041) Hypothetical protein MG061 homolog 1 (R02_orf564o)|
          Length = 564

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 21/72 (29%), Positives = 30/72 (41%)
 Frame = -2

Query: 456 KKIGMLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVMVGLPTTGGAPPVAPVEESA*LIF 277
           K IGM G+        +V++  LTG  W I  A           G   + P+ E A   F
Sbjct: 305 KMIGMYGICL------VVLVNPLTGGWWNILQAVSPASSFNVKDGVKTLKPL-EGAGGYF 357

Query: 276 AAMTMYSWLWLL 241
           A +   + LW+L
Sbjct: 358 AGLPTLAILWVL 369



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>TM86A_BOVIN (Q3MHQ7) Transmembrane protein 86A|
          Length = 240

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 593 ASLPSWVSALLVATLPVFSVLLFLI 519
           +S PSWVSA L+  LP+F + LFL+
Sbjct: 32  SSSPSWVSA-LIKCLPIFCLWLFLL 55



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>NU4M_ACACA (Q37375) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 497

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = -3

Query: 563 LVATLPVFSVLLFLIRLTTLSRSSTMPRVLQWAMLL 456
           LV+T+P+FS+ LF++ L+ +S   T   + ++ +LL
Sbjct: 375 LVSTMPIFSLCLFILILSNISFPGTSSFIGEFLILL 410



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>TM86A_MOUSE (Q9D8N3) Transmembrane protein 86A|
          Length = 241

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 593 ASLPSWVSALLVATLPVFSVLLFLI 519
           +S PSWVSA L+  LP+F + LFL+
Sbjct: 32  SSSPSWVSA-LIKCLPIFCLWLFLL 55



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>C43BP_BOVIN (Q9GKI7) Goodpasture antigen-binding protein (EC 2.7.11.9) (GPBP)|
           (Collagen type IV alpha-3-binding protein) (StAR-related
           lipid transfer protein 11) (StARD11) (START
           domain-containing protein 11)
          Length = 624

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +1

Query: 373 PLSTSKSTNHDDTKGEPSGEKAQHANLLNSIAHCSTLGIVEERDKVVSRM 522
           P  T K  N  D KGE    KA  A +L +++HC  L +V+  D    RM
Sbjct: 229 PHVTPKGINGIDFKGEAITFKATTAGILATLSHCIEL-MVKREDSWQKRM 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,089,165
Number of Sequences: 219361
Number of extensions: 2279342
Number of successful extensions: 5947
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5932
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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