ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38n13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK071500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 3e-12
2dbj|AK059612.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 3e-12
3gb|BT016874.1| Zea mays clone Contig707 mRNA sequence 74 2e-10
4gb|BT016861.1| Zea mays clone Contig694 mRNA sequence 74 2e-10
5gb|AY103946.1| Zea mays PCO074099 mRNA sequence 74 2e-10
6dbj|AK103990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 7e-10
7emb|AJ311779.1|NTA311779 Nicotiana tabacum partial mRNA for mito... 66 4e-08
8gb|AY644469.1| Saccharum officinarum mitochondrial 2-oxoglutarat... 64 2e-07
9gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome... 60 3e-06
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 60 3e-06
11emb|AJ311778.1|NTA311778 Nicotiana tabacum mRNA for mitochondria... 58 1e-05
12gb|BT013008.1| Lycopersicon esculentum clone 114243R, mRNA sequence 52 7e-04
13gb|DQ056436.1| Lycopersicon esculentum oxoglutarate/malate trans... 52 7e-04
14dbj|D45075.1|PNI2OMTC Panicum miliaceum mRNA for 2-oxoglutarate/... 52 7e-04
15ref|NM_121981.3| Arabidopsis thaliana binding / oxidative phosph... 44 0.16
16gb|AY700673.1| Helianthus tuberosus putative dicarboxylate/trica... 44 0.16
17gb|AY056307.1| Arabidopsis thaliana putative oxoglutarate/malate... 44 0.16
18gb|AF360153.1| Arabidopsis thaliana putative oxoglutarate/malate... 44 0.16
19emb|BX830426.1|CNS0A1DP Arabidopsis thaliana Full-length cDNA Co... 44 0.16
20emb|BX831268.1|CNS0A0UC Arabidopsis thaliana Full-length cDNA Co... 44 0.16
21emb|BX831238.1|CNS0A0TV Arabidopsis thaliana Full-length cDNA Co... 44 0.16
22gb|AY085901.1| Arabidopsis thaliana clone 19510 mRNA, complete s... 44 0.16
23emb|AJ311780.1|ATH311780 Arabidopsis thaliana mRNA for mitochond... 44 0.16
24gb|AC091230.23| Homo sapiens chromosome 15, clone RP11-414J4, co... 42 0.64
25gb|AC120406.27| Mus musculus chromosome 12, clone RP24-418L10, c... 40 2.5
26ref|XM_867954.1| PREDICTED: Bos taurus similar to jumonji domain... 40 2.5
27ref|XM_881052.1| PREDICTED: Bos taurus similar to jumonji domain... 40 2.5
28ref|XM_881032.1| PREDICTED: Bos taurus similar to jumonji domain... 40 2.5
29gb|AC104880.13| Mus musculus chromosome 12, clone RP23-141H24, c... 40 2.5
30ref|XM_531921.2| PREDICTED: Canis familiaris similar to jumonji ... 40 2.5
31gb|AC117391.8| Homo sapiens 3 BAC RP11-3J15 (Roswell Park Cancer... 40 2.5
32emb|X99853.1|STOXMATR S.tuberosum mRNA for oxoglutarate malate t... 40 2.5
33emb|AJ299250.1|NTA299250 Nicotiana tabacum mRNA for mitochondria... 40 2.5
34dbj|AP006391.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 2.5
35emb|AJ311777.1|NTA311777 Nicotiana tabacum partial mRNA for mito... 40 2.5
36emb|AJ311776.1|NTA311776 Nicotiana tabacum mRNA for mitochondria... 40 2.5
37dbj|D45074.1|PNI2OMTB Panicum miliaceum mRNA for 2-oxoglutarate/... 40 2.5
38dbj|D45073.1|PNI2OMTA Panicum miliaceum mRNA for 2-oxoglutarate/... 40 2.5

>dbj|AK071500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093C11, full
            insert sequence
          Length = 1425

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                        
Query: 96   ctccaactggagatcttatatgccgatcttcttctggtacttntggatttgattcaagaa 155
            ||||||||| ||| ||||||| || |||| ||||| | |||| |||||||||||||||||
Sbjct: 1143 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 1084

                                                   
Query: 156  gagccacgtcatcatgacatgcggggcgatcctgacaca 194
             | ||| |||||||| ||||| || || |||||||||||
Sbjct: 1083 tatccatgtcatcatcacatggggagcaatcctgacaca 1045



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>dbj|AK059612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F09, full
            insert sequence
          Length = 1359

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                        
Query: 96   ctccaactggagatcttatatgccgatcttcttctggtacttntggatttgattcaagaa 155
            ||||||||| ||| ||||||| || |||| ||||| | |||| |||||||||||||||||
Sbjct: 1069 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 1010

                                                   
Query: 156  gagccacgtcatcatgacatgcggggcgatcctgacaca 194
             | ||| |||||||| ||||| || || |||||||||||
Sbjct: 1009 tatccatgtcatcatcacatggggagcaatcctgacaca 971



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>gb|BT016874.1| Zea mays clone Contig707 mRNA sequence
          Length = 1051

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 112 tatatgccgatcttcttctggtacttntggatttgattcaagaagagccacgtcatcatg 171
           |||||||||||||||||||   |||| ||||| ||||||||||| | ||| |||||||||
Sbjct: 350 tatatgccgatcttcttctcaaacttctggatctgattcaagaatatccaggtcatcatg 409

                               
Query: 172 acatgcggggcgatcctgac 191
           ||||| || || ||||||||
Sbjct: 410 acatggggtgcaatcctgac 429



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>gb|BT016861.1| Zea mays clone Contig694 mRNA sequence
          Length = 1412

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 112 tatatgccgatcttcttctggtacttntggatttgattcaagaagagccacgtcatcatg 171
           |||||||||||||||||||   |||| ||||| ||||||||||| | ||| |||||||||
Sbjct: 354 tatatgccgatcttcttctcaaacttctggatctgattcaagaatatccaggtcatcatg 413

                               
Query: 172 acatgcggggcgatcctgac 191
           ||||| || || ||||||||
Sbjct: 414 acatggggtgcaatcctgac 433



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>gb|AY103946.1| Zea mays PCO074099 mRNA sequence
          Length = 1530

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                        
Query: 112  tatatgccgatcttcttctggtacttntggatttgattcaagaagagccacgtcatcatg 171
            |||||||||||||||||||   |||| ||||| ||||||||||| | ||| |||||||||
Sbjct: 1089 tatatgccgatcttcttctcaaacttctggatctgattcaagaatatccaggtcatcatg 1030

                                
Query: 172  acatgcggggcgatcctgac 191
            ||||| || || ||||||||
Sbjct: 1029 acatggggtgcaatcctgac 1010



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>dbj|AK103990.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B11, full
           insert sequence
          Length = 871

 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 96  ctccaactggagatcttatatgccgatcttcttctggtacttntggatttgattcaagaa 155
           ||||||||| ||| ||||||| || |||| ||||| | |||| |||||||||||||||||
Sbjct: 590 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 531

                                                  
Query: 156 gagccacgtcatcatgacatgcggggcgatcctgacaca 194
            | ||| |||||||| ||||| || || |||||| ||||
Sbjct: 530 tatccatgtcatcatcacatggggagcaatcctggcaca 492



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>emb|AJ311779.1|NTA311779 Nicotiana tabacum partial mRNA for mitochondrial
           dicarboxylate/tricarboxylate carrier (dtc4 gene)
          Length = 908

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 135 cttntggatttgattcaagaagagccacgtcatcatgacatgcggggcgatcctgacaca 194
           ||| |||||||| || | ||| | |||||||||||||||||| ||||| ||||| |||||
Sbjct: 658 cttctggatttggttaaggaatatccacgtcatcatgacatgaggggcaatcctaacaca 599

                   
Query: 195 atatactg 202
           ||||||||
Sbjct: 598 atatactg 591



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>gb|AY644469.1| Saccharum officinarum mitochondrial 2-oxoglutarate/malate
            translocator mRNA, complete cds; nuclear gene for
            mitochondrial product
          Length = 1416

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 112  tatatgccgatcttcttctggtacttntggatttgattcaagaagagccacgtcatcatg 171
            |||||||| ||||||||||    ||| ||||| ||||||||||| | ||| |||||||||
Sbjct: 1091 tatatgccaatcttcttctcaatcttctggatctgattcaagaatatccaggtcatcatg 1032

                                   
Query: 172  acatgcggggcgatcctgacaca 194
            ||||| || || |||||||||||
Sbjct: 1031 acatggggtgcaatcctgacaca 1009



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>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02,
             complete sequence
          Length = 75456

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                         
Query: 96    ctccaactggagatcttatatgccgatcttcttctggtacttntggatttgattcaagaa 155
             ||||||||| ||| ||||||| || |||| ||||| | |||| |||||||||||||||||
Sbjct: 53309 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 53250

                          
Query: 156   gagccacgtcatc 168
              | ||| ||||||
Sbjct: 53249 tatccatgtcatc 53237



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                           
Query: 96      ctccaactggagatcttatatgccgatcttcttctggtacttntggatttgattcaagaa 155
               ||||||||| ||| ||||||| || |||| ||||| | |||| |||||||||||||||||
Sbjct: 6615255 ctccaactgaagaccttatattccaatctgcttctcgaacttctggatttgattcaagaa 6615196

                            
Query: 156     gagccacgtcatc 168
                | ||| ||||||
Sbjct: 6615195 tatccatgtcatc 6615183



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>emb|AJ311778.1|NTA311778 Nicotiana tabacum mRNA for mitochondrial
           dicarboxylate/tricarboxylate carrier (dtc3 gene)
          Length = 1144

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 135 cttntggatttgattcaagaagagccacgtcatcatgacatgcggggcgatcctgacaca 194
           ||| |||||||| || | ||| | |||||||||||||||||| || || ||||| |||||
Sbjct: 903 cttctggatttggttaaggaatatccacgtcatcatgacatgaggcgcaatcctaacaca 844

                   
Query: 195 atatactg 202
           ||||||||
Sbjct: 843 atatactg 836



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>gb|BT013008.1| Lycopersicon esculentum clone 114243R, mRNA sequence
          Length = 1356

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 153 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactg 202
           ||||| ||| |||||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 975 gaagatccaagtcatcataacatgaggggcaatcctaacacaatatactg 926



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>gb|DQ056436.1| Lycopersicon esculentum oxoglutarate/malate translocator (ACI36)
           mRNA, complete cds
          Length = 1339

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 153 gaagagccacgtcatcatgacatgcggggcgatcctgacacaatatactg 202
           ||||| ||| |||||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 879 gaagatccaagtcatcataacatgaggggcaatcctaacacaatatactg 830



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>dbj|D45075.1|PNI2OMTC Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator,
            complete cds
          Length = 2371

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 134  acttntggatttgattcaagaagagccacgtcatcatgacatgcggggcgatcctgacac 193
            |||| ||||| ||||||||||| | ||| |||| |||||||||||| || ||||| ||||
Sbjct: 2041 acttctggatctgattcaagaatatccaggtcaacatgacatgcggagcaatcctcacac 1982

             
Query: 194  a 194
            |
Sbjct: 1981 a 1981



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>ref|NM_121981.3| Arabidopsis thaliana binding / oxidative phosphorylation uncoupler
            AT5G19760 mRNA, complete cds
          Length = 1521

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 153  gaagagccacgtcatcatgacatgcggggcgatcctgacaca 194
            ||||| ||| ||||||||||| || ||||| |||||||||||
Sbjct: 1001 gaagatccatgtcatcatgacgtgaggggcaatcctgacaca 960



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>gb|AY700673.1| Helianthus tuberosus putative dicarboxylate/tricarboxylate carrier
           mRNA, partial cds
          Length = 669

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 165 catcatgacatgcggggcgatcctgacacaatatactg 202
           ||||||||| || || |||||||| |||||||||||||
Sbjct: 669 catcatgacgtggggagcgatcctaacacaatatactg 632



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>gb|AY056307.1| Arabidopsis thaliana putative oxoglutarate/malate translocator
           protein (At5g19760) mRNA, complete cds
          Length = 928

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 153 gaagagccacgtcatcatgacatgcggggcgatcctgacaca 194
           ||||| ||| ||||||||||| || ||||| |||||||||||
Sbjct: 855 gaagatccatgtcatcatgacgtgaggggcaatcctgacaca 814



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>gb|AF360153.1| Arabidopsis thaliana putative oxoglutarate/malate translocator
           protein (At5g19760) mRNA, complete cds
          Length = 1219

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 153 gaagagccacgtcatcatgacatgcggggcgatcctgacaca 194
           ||||| ||| ||||||||||| || ||||| |||||||||||
Sbjct: 964 gaagatccatgtcatcatgacgtgaggggcaatcctgacaca 923



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>emb|BX830426.1|CNS0A1DP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB7ZD04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1157

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 153 gaagagccacgtcatcatgacatgcggggcgatcctgacaca 194
           ||||| ||| ||||||||||| || ||||| |||||||||||
Sbjct: 949 gaagatccatgtcatcatgacgtgaggggcaatcctgacaca 908



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>emb|BX831268.1|CNS0A0UC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS73ZB11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1270

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 153 gaagagccacgtcatcatgacatgcggggcgatcctgacaca 194
           ||||| ||| ||||||||||| || ||||| |||||||||||
Sbjct: 950 gaagatccatgtcatcatgacgtgaggggcaatcctgacaca 909



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>emb|BX831238.1|CNS0A0TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS70ZD06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1160

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 153 gaagagccacgtcatcatgacatgcggggcgatcctgacaca 194
           ||||| ||| ||||||||||| || ||||| |||||||||||
Sbjct: 949 gaagatccatgtcatcatgacgtgaggggcaatcctgacaca 908



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>gb|AY085901.1| Arabidopsis thaliana clone 19510 mRNA, complete sequence
          Length = 1166

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 153 gaagagccacgtcatcatgacatgcggggcgatcctgacaca 194
           ||||| ||| ||||||||||| || ||||| |||||||||||
Sbjct: 964 gaagatccatgtcatcatgacgtgaggggcaatcctgacaca 923



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>emb|AJ311780.1|ATH311780 Arabidopsis thaliana mRNA for mitochondrial
           dicarboxylate/tricarboxylate carrier (dtc gene)
          Length = 1192

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 153 gaagagccacgtcatcatgacatgcggggcgatcctgacaca 194
           ||||| ||| ||||||||||| || ||||| |||||||||||
Sbjct: 948 gaagatccatgtcatcatgacgtgaggggcaatcctgacaca 907



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>gb|AC091230.23| Homo sapiens chromosome 15, clone RP11-414J4, complete sequence
          Length = 206482

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     taaaactctgtctaccaaaaa 31
              |||||||||||||||||||||
Sbjct: 161118 taaaactctgtctaccaaaaa 161098



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>gb|AC120406.27| Mus musculus chromosome 12, clone RP24-418L10, complete sequence
          Length = 198624

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    ctctgtctaccaaaaacaac 35
             ||||||||||||||||||||
Sbjct: 67519 ctctgtctaccaaaaacaac 67500



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>ref|XM_867954.1| PREDICTED: Bos taurus similar to jumonji domain containing 1B,
            transcript variant 1 (LOC534005), mRNA
          Length = 6330

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   gagatgcaaagctgctgaaa 60
            ||||||||||||||||||||
Sbjct: 1656 gagatgcaaagctgctgaaa 1637



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>ref|XM_881052.1| PREDICTED: Bos taurus similar to jumonji domain containing 1B,
           transcript variant 3 (LOC534005), mRNA
          Length = 5013

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 41  gagatgcaaagctgctgaaa 60
           ||||||||||||||||||||
Sbjct: 388 gagatgcaaagctgctgaaa 369



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>ref|XM_881032.1| PREDICTED: Bos taurus similar to jumonji domain containing 1B,
           transcript variant 2 (LOC534005), mRNA
          Length = 4872

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 41  gagatgcaaagctgctgaaa 60
           ||||||||||||||||||||
Sbjct: 388 gagatgcaaagctgctgaaa 369



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>gb|AC104880.13| Mus musculus chromosome 12, clone RP23-141H24, complete sequence
          Length = 206848

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    ctctgtctaccaaaaacaac 35
             ||||||||||||||||||||
Sbjct: 28075 ctctgtctaccaaaaacaac 28094



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>ref|XM_531921.2| PREDICTED: Canis familiaris similar to jumonji domain containing 1B
            (LOC474695), mRNA
          Length = 6117

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   gagatgcaaagctgctgaaa 60
            ||||||||||||||||||||
Sbjct: 1732 gagatgcaaagctgctgaaa 1713



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>gb|AC117391.8| Homo sapiens 3 BAC RP11-3J15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170008

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 124    ttcttctggtacttntggatttg 146
              |||||||||||||| ||||||||
Sbjct: 138812 ttcttctggtacttttggatttg 138834



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>emb|X99853.1|STOXMATR S.tuberosum mRNA for oxoglutarate malate translocator
          Length = 1398

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 163 gtcatcatgacatgcggggcgatcctgacacaatatactg 202
           |||||||| ||||| ||||| ||||| | |||||||||||
Sbjct: 879 gtcatcataacatgaggggcaatcctaatacaatatactg 840



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>emb|AJ299250.1|NTA299250 Nicotiana tabacum mRNA for mitochondrial 2-oxoglutarate/malate
           carrier (momc1 gene)
          Length = 1297

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 163 gtcatcatgacatgcggggcgatcctgacacaatatactg 202
           |||||||| ||||| || || ||||| |||||||||||||
Sbjct: 915 gtcatcataacatgaggagcaatcctaacacaatatactg 876



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>dbj|AP006391.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09E08, TM0265,
             complete sequence
          Length = 100864

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   cgatcctgacacaatatact 201
             ||||||||||||||||||||
Sbjct: 91519 cgatcctgacacaatatact 91500



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>emb|AJ311777.1|NTA311777 Nicotiana tabacum partial mRNA for mitochondrial
           dicarboxylate/tricarboxylate carrier (dtc2 gene)
          Length = 1193

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 163 gtcatcatgacatgcggggcgatcctgacacaatatactg 202
           |||||||| ||||| || || ||||| |||||||||||||
Sbjct: 836 gtcatcataacatgaggagcaatcctaacacaatatactg 797



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>emb|AJ311776.1|NTA311776 Nicotiana tabacum mRNA for mitochondrial
           dicarboxylate/tricarboxylate carrier (dtc1 gene)
          Length = 1230

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 163 gtcatcatgacatgcggggcgatcctgacacaatatactg 202
           |||||||| ||||| || || ||||| |||||||||||||
Sbjct: 899 gtcatcataacatgaggagcaatcctaacacaatatactg 860



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>dbj|D45074.1|PNI2OMTB Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator,
            complete cds
          Length = 1783

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 37/43 (86%)
 Strand = Plus / Minus

                                                       
Query: 134  acttntggatttgattcaagaagagccacgtcatcatgacatg 176
            |||| ||||| ||||||||||| | ||| |||| |||||||||
Sbjct: 1494 acttctggatctgattcaagaatatccaagtcaacatgacatg 1452



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>dbj|D45073.1|PNI2OMTA Panicum miliaceum mRNA for 2-oxoglutarate/malate translocator,
            complete cds
          Length = 1446

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 37/43 (86%)
 Strand = Plus / Minus

                                                       
Query: 134  acttntggatttgattcaagaagagccacgtcatcatgacatg 176
            |||| ||||| ||||||||||| | ||| |||| |||||||||
Sbjct: 1021 acttctggatctgattcaagaatatccaagtcaacatgacatg 979


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,888,690
Number of Sequences: 3902068
Number of extensions: 1888690
Number of successful extensions: 123245
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123156
Number of HSP's gapped (non-prelim): 89
length of query: 202
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 180
effective length of database: 17,147,199,772
effective search space: 3086495958960
effective search space used: 3086495958960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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