>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  265 bits (677), Expect(2) = 6e-90
 Identities = 131/132 (99%), Positives = 131/132 (99%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTRDD IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG
Sbjct: 296 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 355

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA
Sbjct: 356 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 415

Query: 318 NQDAMKTGSFYG 283
           NQDAMKTGSFYG
Sbjct: 416 NQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 6e-90
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -1

Query: 235 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 122
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  217 bits (552), Expect(2) = 1e-69
 Identities = 101/132 (76%), Positives = 119/132 (90%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV   G
Sbjct: 306 APTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVG 365

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           ++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDA
Sbjct: 366 VDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDA 425

Query: 318 NQDAMKTGSFYG 283
           N DA+K G+FYG
Sbjct: 426 NNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 1e-69
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -1

Query: 238 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 122
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  209 bits (533), Expect(2) = 8e-68
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G
Sbjct: 306 APTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLG 365

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           +E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDA
Sbjct: 366 VEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDA 425

Query: 318 NQDAMKTGSFYG 283
           N DA+  G+FYG
Sbjct: 426 NADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 8e-68
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -1

Query: 235 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 122
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  209 bits (531), Expect(2) = 2e-66
 Identities = 98/132 (74%), Positives = 116/132 (87%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G
Sbjct: 304 APTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVG 363

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           ++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDA
Sbjct: 364 VDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDA 423

Query: 318 NQDAMKTGSFYG 283
           N+DA+  G+F+G
Sbjct: 424 NKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 2e-66
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -1

Query: 235 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 128
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  233 bits (593), Expect = 5e-61
 Identities = 109/132 (82%), Positives = 123/132 (93%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G
Sbjct: 293 APTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIG 352

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           +ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG A
Sbjct: 353 VENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQA 412

Query: 318 NQDAMKTGSFYG 283
           N DAMKTG+FYG
Sbjct: 413 NDDAMKTGAFYG 424

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  233 bits (593), Expect = 5e-61
 Identities = 109/132 (82%), Positives = 123/132 (93%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTRDD +GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG
Sbjct: 296 APTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTG 355

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           +ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDA
Sbjct: 356 VENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDA 415

Query: 318 NQDAMKTGSFYG 283
           N DAMKTGSFYG
Sbjct: 416 NSDAMKTGSFYG 427

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  220 bits (560), Expect = 4e-57
 Identities = 102/132 (77%), Positives = 121/132 (91%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   G
Sbjct: 306 APTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVG 365

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           +++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDA
Sbjct: 366 VDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDA 425

Query: 318 NQDAMKTGSFYG 283
           N DAM TG+FYG
Sbjct: 426 NSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  219 bits (558), Expect = 6e-57
 Identities = 101/131 (77%), Positives = 121/131 (92%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  TG
Sbjct: 302 APTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETG 361

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           +ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+A
Sbjct: 362 VENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEA 421

Query: 318 NQDAMKTGSFY 286
           N+DAMKTGSF+
Sbjct: 422 NEDAMKTGSFF 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  218 bits (556), Expect = 1e-56
 Identities = 105/130 (80%), Positives = 119/130 (91%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  TG
Sbjct: 310 APTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTG 369

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           IE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDA
Sbjct: 370 IEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDA 429

Query: 318 NQDAMKTGSF 289
           N DA+ TG+F
Sbjct: 430 NADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  217 bits (552), Expect = 3e-56
 Identities = 104/128 (81%), Positives = 119/128 (92%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG
Sbjct: 305 APTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTG 364

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           IE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDA
Sbjct: 365 IELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDA 424

Query: 318 NQDAMKTG 295
           N DA+ TG
Sbjct: 425 NADAINTG 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  216 bits (551), Expect = 4e-56
 Identities = 100/130 (76%), Positives = 119/130 (91%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV   G
Sbjct: 306 APTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVG 365

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           ++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDA
Sbjct: 366 VDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDA 425

Query: 318 NQDAMKTGSF 289
           NQDA+K G+F
Sbjct: 426 NQDAIKRGTF 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  213 bits (541), Expect = 6e-55
 Identities = 103/131 (78%), Positives = 114/131 (87%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV  TG
Sbjct: 310 APTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTG 369

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           IE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDA
Sbjct: 370 IEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDA 429

Query: 318 NQDAMKTGSFY 286
           N DA+  GSF+
Sbjct: 430 NADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  208 bits (529), Expect = 1e-53
 Identities = 93/131 (70%), Positives = 119/131 (90%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTRDD +GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   G
Sbjct: 308 APTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVG 367

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           ++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+A
Sbjct: 368 VDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNA 427

Query: 318 NQDAMKTGSFY 286
           N+DA+K+GSF+
Sbjct: 428 NEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  199 bits (507), Expect = 5e-51
 Identities = 90/131 (68%), Positives = 117/131 (89%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IGVCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   G
Sbjct: 310 APTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVG 369

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 319
           ++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+A
Sbjct: 370 VDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNA 429

Query: 318 NQDAMKTGSFY 286
           N+DA+K+GSF+
Sbjct: 430 NEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  168 bits (426), Expect = 1e-41
 Identities = 78/107 (72%), Positives = 92/107 (85%)
 Frame = -2

Query: 678 APTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 499
           APTR+D IG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW    G
Sbjct: 303 APTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVG 362

Query: 498 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 358
           +E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 363 VERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  142 bits (359), Expect = 7e-34
 Identities = 71/116 (61%), Positives = 86/116 (74%)
 Frame = -2

Query: 675 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 496
           PTR+D IGVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+  TG+
Sbjct: 280 PTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGV 339

Query: 495 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 328
           + IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 340 DKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  110 bits (276), Expect = 3e-24
 Identities = 49/110 (44%), Positives = 73/110 (66%)
 Frame = -2

Query: 675 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 496
           P RD+ +G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   G 
Sbjct: 180 PHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGY 239

Query: 495 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 346
           EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 240 ENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  105 bits (262), Expect = 1e-22
 Identities = 48/110 (43%), Positives = 71/110 (64%)
 Frame = -2

Query: 675 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 496
           P RDD +G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   G 
Sbjct: 180 PNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGF 239

Query: 495 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 346
           E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 240 ERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 597 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 418
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -2

Query: 453 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 298
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 297 GSFYG*KILHTHPPSLAA 244
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -2

Query: 600 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 421
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 420 KLLEYGHMLVQEQDNVKRV 364
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 514 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 639
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 350 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 454
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -2

Query: 453 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 298
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 297 GSFYG*KILHTHPPSLAA 244
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -2

Query: 516 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 409
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,731,981
Number of Sequences: 219361
Number of extensions: 1884816
Number of successful extensions: 5722
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5719
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)