ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39b20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234677.1|HVU234677 Hordeum vulgare genomic DNA fragment; c... 660 0.0
2ref|XM_480492.1| Oryza sativa (japonica cultivar-group), mRNA 127 4e-26
3gb|AY644645.1| Oryza sativa (indica cultivar-group) putative nuc... 127 4e-26
4dbj|AK103422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
5dbj|AK059471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
7dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
8ref|XM_473923.1| Oryza sativa (japonica cultivar-group), predic... 70 8e-09
9dbj|AK103446.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 8e-09
10dbj|AK063918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 8e-09
11emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, stra... 50 0.007
12emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 50 0.007
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
14ref|XM_748256.1| Aspergillus fumigatus Af293 hypothetical protei... 44 0.44
15emb|AJ344214.2|YEN344214 Yersinia enterocolitica (type 0:8) yts1... 44 0.44
16emb|AL824703.12| Mouse DNA sequence from clone RP23-317M2 on chr... 44 0.44
17gb|AC123695.10| Mus musculus chromosome 15, clone RP23-328C23, c... 42 1.8
18gb|AC069559.27| Mus musculus strain C57BL/6J clone rp23-136j2 ma... 42 1.8
19gb|AC160125.2| Mus musculus BAC clone RP23-317M11 from chromosom... 42 1.8
20gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.8
21emb|AL606660.3|OSJN00111 Oryza sativa genomic DNA, chromosome 4,... 42 1.8
22gb|AC009385.8| Drosophila melanogaster 3L BAC RP98-23M20 (Roswel... 42 1.8
23gb|AC009380.6| Drosophila melanogaster 3L BAC RP98-17L5 (Roswell... 42 1.8
24ref|NM_140792.1| Drosophila melanogaster MYPT-75D CG6896-RA (MYP... 42 1.8
25gb|AY075426.1| Drosophila melanogaster LD46604 full length cDNA 42 1.8
26gb|BT024069.1| Zea mays clone EL01N0450D06 mRNA sequence 42 1.8
27gb|AY105669.1| Zea mays PCO148095 mRNA sequence 42 1.8
28gb|AE003519.3| Drosophila melanogaster chromosome 3L, section 66... 42 1.8
29gb|AC159965.5| Mus musculus chromosome 15, clone RP23-471C16, co... 42 1.8
30emb|AL929037.3| Mouse DNA sequence from clone RP23-297K24 on chr... 42 1.8
31emb|AL732449.5| Mouse DNA sequence from clone RP23-191F11 on chr... 42 1.8
32gb|AC121514.14| Mus musculus chromosome 8, clone RP24-394H9, com... 40 6.9
33gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.9
34gb|AC091295.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.9
35gb|AC158936.4| Mus musculus chromosome 3, clone RP23-235P13, com... 40 6.9
36gb|AC135239.3| Mus musculus BAC clone RP23-324D2 from chromosome... 40 6.9
37gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cance... 40 6.9
38emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in ... 40 6.9
39gb|AC104884.10| Mus musculus chromosome 3, clone RP24-281E9, com... 40 6.9
40gb|AC148607.16| Medicago truncatula clone mth2-43g15, complete s... 40 6.9
41gb|AC162031.12| Medicago truncatula clone mth2-194a22, complete ... 40 6.9
42gb|AC137819.19| Medicago truncatula clone mth2-21i24, complete s... 40 6.9
43emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in... 40 6.9
44ref|XM_499995.1| Yarrowia lipolytica CLIB122, YALI0A11869g predi... 40 6.9
45gb|AC158295.5| Mus musculus chromosome 8, clone RP24-208G23, com... 40 6.9
46emb|CR859732.1| Pongo pygmaeus mRNA; cDNA DKFZp468I108 (from clo... 40 6.9
47gb|AC087115.10| Mus Musculus Strain C57Bl6/J Chromosome 8 RP23-9... 40 6.9
48gb|AC144670.1| Homo sapiens chromosome 8, clone XXfos-85539D6, c... 40 6.9
49gb|AC121769.4| Mus musculus BAC clone RP23-340N4 from chromosome... 40 6.9
50emb|BX323076.9| Zebrafish DNA sequence from clone DKEY-106A24 in... 40 6.9
51emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in ... 40 6.9
52dbj|AP006545.1| Homo sapiens genomic DNA, chromosome 8p11.21, cl... 40 6.9
53emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, c... 40 6.9
54gb|AC152923.2| Mus musculus BAC clone RP24-267O6 from 5, complet... 40 6.9
55emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 6.9
56emb|AL844871.11| Mouse DNA sequence from clone RP23-271B15 on ch... 40 6.9
57emb|AL772236.11| Mouse DNA sequence from clone RP23-98F14 on chr... 40 6.9
58dbj|AB022785.1| Homo sapiens ASH2L gene, complete cds, similar t... 40 6.9
59dbj|AB020982.1| Homo sapiens ASH2L mRNA, complete cds, similar t... 40 6.9
60dbj|AP000065.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 6.9 
>emb|AJ234677.1|HVU234677 Hordeum vulgare genomic DNA fragment; clone MWG0957.uni
          Length = 345

 Score =  660 bits (333), Expect = 0.0
 Identities = 337/339 (99%)
 Strand = Plus / Minus

                                                                       
Query: 135 ttctttcctgcgctagctgtaccagcactctgcctgctctgatagcctcggccacctcct 194
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttcttacctgcgctagctgtaccagcactctgcctgctctgatagcctcggccacctcct 280

                                                                       
Query: 195 ctaccaccatctcggccaccagatcggccaaacctgccaccgccatcacggccacctgac 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctaccaccatctcggccaccagatcggccaaacctgccaccgccatcacggccacctgac 220

                                                                       
Query: 255 cggccaaacctgccgccgccatcacgaccaccagatcggccgaacctgccaccgccagaa 314
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 219 cggccaaacctgccgccgccatcacgaccaccagatcggscgaacctgccaccgccagaa 160

                                                                       
Query: 315 cggccaccatccctaccaccagatcgaccacccccaccaccaaattgacccttaggctta 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 cggccaccatccctaccaccagatcgaccacccccaccaccaaattgacccttaggctta 100

                                                                       
Query: 375 gcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctcaagtgctttc 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99  gcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctcaagtgctttc 40

                                                  
Query: 435 gaaaaggaactctcatcagtaaaatccatgtaagctatt 473
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 39  gaaaaggaactctcatcagtaaaatccatgtaagctatt 1
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>ref|XM_480492.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2090

 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                        
Query: 366  ttaggcttagcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctca 425
            |||||||| |||||| ||||||||| |||| |||||||||||||||| ||||| || |||
Sbjct: 1582 ttaggcttggcttcatcaacatacaggttgtagccaccaaggtcagacccacttagttca 1523

                                                                        
Query: 426  agtgctttcgaaaaggaactctcatcagtaaaatccatgtaagctattcctttgcttgca 485
            ||||| ||||| ||||||  || |||  ||||||| ||||| ||||| ||||||||||||
Sbjct: 1522 agtgccttcgagaaggaagcctgatccttaaaatctatgtatgctatccctttgcttgca 1463

                                        
Query: 486  ccattctcatgatccatcggaactgaga 513
            ||| | ||| ||||||| ||||||||||
Sbjct: 1462 ccagtttcacgatccatgggaactgaga 1435



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                  
Query: 123  ccaaatgttgtcttctttcctgcgctagctgtaccagcactctgcctgctctga 176
            ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1813 ccaaaagttgtcttctttcctgtactagctgtaccagcactctgcctgctctga 1760
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>gb|AY644645.1| Oryza sativa (indica cultivar-group) putative nucleolin (NUC) mRNA,
            complete cds
          Length = 2039

 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                        
Query: 366  ttaggcttagcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctca 425
            |||||||| |||||| ||||||||| |||| |||||||||||||||| ||||| || |||
Sbjct: 1495 ttaggcttggcttcatcaacatacaggttgtagccaccaaggtcagacccacttagttca 1436

                                                                        
Query: 426  agtgctttcgaaaaggaactctcatcagtaaaatccatgtaagctattcctttgcttgca 485
            ||||| ||||| ||||||  || |||  ||||||| ||||| ||||| ||||||||||||
Sbjct: 1435 agtgccttcgagaaggaagcctgatccttaaaatctatgtatgctatccctttgcttgca 1376

                                        
Query: 486  ccattctcatgatccatcggaactgaga 513
            ||| | ||| ||||||| ||||||||||
Sbjct: 1375 ccagtttcacgatccatgggaactgaga 1348



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 84/96 (87%), Gaps = 3/96 (3%)
 Strand = Plus / Minus

                                                                        
Query: 123  ccaaatgttgtcttctttcctgcgctagctgtaccagcactctgcctgctctgata---g 179
            ||||| ||||||||||||||||  |||||||||||||||||||||||||||||| |   |
Sbjct: 1726 ccaaaagttgtcttctttcctgtactagctgtaccagcactctgcctgctctgaaaaccg 1667

                                                
Query: 180  cctcggccacctcctctaccaccatctcggccacca 215
            ||||| || |||| ||| |||||||||| |||||||
Sbjct: 1666 cctcgtccgcctcttctgccaccatctctgccacca 1631
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>dbj|AK103422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K11, full
            insert sequence
          Length = 2089

 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                        
Query: 366  ttaggcttagcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctca 425
            |||||||| |||||| ||||||||| |||| |||||||||||||||| ||||| || |||
Sbjct: 1581 ttaggcttggcttcatcaacatacaggttgtagccaccaaggtcagacccacttagttca 1522

                                                                        
Query: 426  agtgctttcgaaaaggaactctcatcagtaaaatccatgtaagctattcctttgcttgca 485
            ||||| ||||| ||||||  || |||  ||||||| ||||| ||||| ||||||||||||
Sbjct: 1521 agtgccttcgagaaggaagcctgatccttaaaatctatgtatgctatccctttgcttgca 1462

                                        
Query: 486  ccattctcatgatccatcggaactgaga 513
            ||| | ||| ||||||| ||||||||||
Sbjct: 1461 ccagtttcacgatccatgggaactgaga 1434



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                  
Query: 123  ccaaatgttgtcttctttcctgcgctagctgtaccagcactctgcctgctctga 176
            ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1812 ccaaaagttgtcttctttcctgtactagctgtaccagcactctgcctgctctga 1759
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>dbj|AK059471.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-E02, full
           insert sequence
          Length = 1160

 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                       
Query: 366 ttaggcttagcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctca 425
           |||||||| |||||| ||||||||| |||| |||||||||||||||| ||||| || |||
Sbjct: 712 ttaggcttggcttcatcaacatacaggttgtagccaccaaggtcagacccacttagttca 653

                                                                       
Query: 426 agtgctttcgaaaaggaactctcatcagtaaaatccatgtaagctattcctttgcttgca 485
           ||||| ||||| ||||||  || |||  ||||||| ||||| ||||| ||||||||||||
Sbjct: 652 agtgccttcgagaaggaagcctgatccttaaaatctatgtatgctatccctttgcttgca 593

                                       
Query: 486 ccattctcatgatccatcggaactgaga 513
           ||| | ||| ||||||| ||||||||||
Sbjct: 592 ccagtttcacgatccatgggaactgaga 565



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                 
Query: 123 ccaaatgttgtcttctttcctgcgctagctgtaccagcactctgcctgctctga 176
           ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 943 ccaaaagttgtcttctttcctgtactagctgtaccagcactctgcctgctctga 890
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                           
Query: 366     ttaggcttagcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctca 425
               |||||||| |||||| ||||||||| |||| |||||||||||||||| ||||| || |||
Sbjct: 5416545 ttaggcttggcttcatcaacatacaggttgtagccaccaaggtcagacccacttagttca 5416604

                                                              
Query: 426     agtgctttcgaaaaggaactctcatcagtaaaatccatgtaagctat 472
               ||||| ||||| ||||||  || |||  ||||||| ||||| |||||
Sbjct: 5416605 agtgccttcgagaaggaagcctgatccttaaaatctatgtatgctat 5416651



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                             
Query: 147     ctagctgtaccagcactctgcctgctctga 176
               ||||||||||||||||||||||||||||||
Sbjct: 5416338 ctagctgtaccagcactctgcctgctctga 5416367



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                       
Query: 474     cctttgcttgcaccattctcatgatccatcggaactgaga 513
               ||||||||||||||| | ||| ||||||| ||||||||||
Sbjct: 5417144 cctttgcttgcaccagtttcacgatccatgggaactgaga 5417183
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>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056O06
          Length = 151038

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                         
Query: 366   ttaggcttagcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctca 425
             |||||||| |||||| ||||||||| |||| |||||||||||||||| ||||| || |||
Sbjct: 86356 ttaggcttggcttcatcaacatacaggttgtagccaccaaggtcagacccacttagttca 86415

                                                            
Query: 426   agtgctttcgaaaaggaactctcatcagtaaaatccatgtaagctat 472
             ||||| ||||| ||||||  || |||  ||||||| ||||| |||||
Sbjct: 86416 agtgccttcgagaaggaagcctgatccttaaaatctatgtatgctat 86462



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                           
Query: 147   ctagctgtaccagcactctgcctgctctga 176
             ||||||||||||||||||||||||||||||
Sbjct: 86149 ctagctgtaccagcactctgcctgctctga 86178



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 474   cctttgcttgcaccattctcatgatccatcggaactgaga 513
             ||||||||||||||| | ||| ||||||| ||||||||||
Sbjct: 86955 cctttgcttgcaccagtttcacgatccatgggaactgaga 86994
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>ref|XM_473923.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2124

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 117  tcgtcaccaaatgttgtcttctttcctgcgctagctgtaccagcactctgc 167
            |||||||| |||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 2117 tcgtcaccgaatgttgtcttctttcctgcactaggtgtaccagcgctctgc 2067



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                        
Query: 375  gcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctcaagtgctttc 434
            |||||| ||||||||||| || | ||||| |||||||||||| | || ||   |||||||
Sbjct: 1883 gcttcatcaacatacaagctgtatccaccgaggtcagatccattcagttcgtatgctttc 1824

                                                                 
Query: 435  gaaaaggaactctcatcagtaaaatccatgtaagctattcctttgcttgcacc 487
            || |||||||  |  || | |||||||||||| || || ||||||||||||||
Sbjct: 1823 gacaaggaaccgttgtccgcaaaatccatgtacgccatccctttgcttgcacc 1771
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>dbj|AK103446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129G11, full
            insert sequence
          Length = 2447

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 117  tcgtcaccaaatgttgtcttctttcctgcgctagctgtaccagcactctgc 167
            |||||||| |||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 2259 tcgtcaccgaatgttgtcttctttcctgcactaggtgtaccagcgctctgc 2209



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                        
Query: 375  gcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctcaagtgctttc 434
            |||||| ||||||||||| || | ||||| |||||||||||| | || ||   |||||||
Sbjct: 2025 gcttcatcaacatacaagctgtatccaccgaggtcagatccattcagttcgtatgctttc 1966

                                                                 
Query: 435  gaaaaggaactctcatcagtaaaatccatgtaagctattcctttgcttgcacc 487
            || |||||||  |  || | |||||||||||| || || ||||||||||||||
Sbjct: 1965 gacaaggaaccgttgtccgcaaaatccatgtacgccatccctttgcttgcacc 1913
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>dbj|AK063918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B06, full
            insert sequence
          Length = 1943

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 117  tcgtcaccaaatgttgtcttctttcctgcgctagctgtaccagcactctgc 167
            |||||||| |||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 1704 tcgtcaccgaatgttgtcttctttcctgcactaggtgtaccagcgctctgc 1654



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                        
Query: 375  gcttcagcaacatacaagttgcagccaccaaggtcagatccactaagctcaagtgctttc 434
            |||||| ||||||||||| || | ||||| |||||||||||| | || ||   |||||||
Sbjct: 1470 gcttcatcaacatacaagctgtatccaccgaggtcagatccattcagttcgtatgctttc 1411

                                                                 
Query: 435  gaaaaggaactctcatcagtaaaatccatgtaagctattcctttgcttgcacc 487
            || |||||||  |  || | |||||||||||| || || ||||||||||||||
Sbjct: 1410 gacaaggaaccgttgtccgcaaaatccatgtacgccatccctttgcttgcacc 1358
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>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11
          Length = 347636

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 224   aaacctgccaccgccatcacggcca 248
             |||||||||||||||||||||||||
Sbjct: 17695 aaacctgccaccgccatcacggcca 17671
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>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 117    tcgtcaccaaatgttgtcttctttcctgc 145
              |||||||| ||||||||||||||||||||
Sbjct: 162573 tcgtcaccgaatgttgtcttctttcctgc 162545



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 375    gcttcagcaacatacaagttgcagccaccaaggtcagatcca 416
              |||||| ||||||||||| || | ||||| ||||||||||||
Sbjct: 162223 gcttcatcaacatacaagctgtatccaccgaggtcagatcca 162182
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 117      tcgtcaccaaatgttgtcttctttcctgc 145
                |||||||| ||||||||||||||||||||
Sbjct: 31584890 tcgtcaccgaatgttgtcttctttcctgc 31584862



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 375      gcttcagcaacatacaagttgcagccaccaaggtcagatcca 416
                |||||| ||||||||||| || | ||||| ||||||||||||
Sbjct: 31584540 gcttcatcaacatacaagctgtatccaccgaggtcagatcca 31584499



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 117      tcgtcaccaaatgttgtcttctttcctgc 145
                |||||||| ||||| ||||||||||||||
Sbjct: 31593989 tcgtcaccgaatgtcgtcttctttcctgc 31593961
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>ref|XM_748256.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g13050)
           partial mRNA
          Length = 2334

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 194 tctaccaccatctcggccacca 215
           ||||||||||||||||||||||
Sbjct: 386 tctaccaccatctcggccacca 407
to top
>emb|AJ344214.2|YEN344214 Yersinia enterocolitica (type 0:8) yts1S gene, yts1C gene, yts1D gene,
             yts1E gene, yts1F gene, yts1G gene, yts1H gene, yts1I
             gene, yts1J gene, yts1K gene, yts1L gene, yts1M gene,
             yts1O gene and chiY gene
          Length = 16996

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 219   cggccaaacctgccaccgccatcacggcca 248
             ||||||||||||||||||||| ||| ||||
Sbjct: 10225 cggccaaacctgccaccgccagcaccgcca 10196
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>emb|AL824703.12| Mouse DNA sequence from clone RP23-317M2 on chromosome 4, complete
             sequence
          Length = 80922

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 186   ccacctcctctaccaccatctc 207
             ||||||||||||||||||||||
Sbjct: 53503 ccacctcctctaccaccatctc 53524
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>gb|AC123695.10| Mus musculus chromosome 15, clone RP23-328C23, complete sequence
          Length = 217334

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 124    caaatgttgtcttctttcctg 144
              |||||||||||||||||||||
Sbjct: 211136 caaatgttgtcttctttcctg 211116
to top
>gb|AC069559.27| Mus musculus strain C57BL/6J clone rp23-136j2 map 9, complete sequence
          Length = 185365

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 124   caaatgttgtcttctttcctg 144
             |||||||||||||||||||||
Sbjct: 79351 caaatgttgtcttctttcctg 79371
to top
>gb|AC160125.2| Mus musculus BAC clone RP23-317M11 from chromosome 9, complete sequence
          Length = 209835

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 124    caaatgttgtcttctttcctg 144
              |||||||||||||||||||||
Sbjct: 148680 caaatgttgtcttctttcctg 148660
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 303    ccaccgccagaacggccacca 323
              |||||||||||||||||||||
Sbjct: 631902 ccaccgccagaacggccacca 631922
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>emb|AL606660.3|OSJN00111 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085C12,
            complete sequence
          Length = 122721

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 117  tcgtcaccaaatgttgtcttctttcctgc 145
            |||||||| ||||| ||||||||||||||
Sbjct: 8806 tcgtcaccgaatgtcgtcttctttcctgc 8778
to top
>gb|AC009385.8| Drosophila melanogaster 3L BAC RP98-23M20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 178628

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 202    catctcggccaccagatcggc 222
              |||||||||||||||||||||
Sbjct: 131972 catctcggccaccagatcggc 131952
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>gb|AC009380.6| Drosophila melanogaster 3L BAC RP98-17L5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187973

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   catctcggccaccagatcggc 222
             |||||||||||||||||||||
Sbjct: 76303 catctcggccaccagatcggc 76283
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>ref|NM_140792.1| Drosophila melanogaster MYPT-75D CG6896-RA (MYPT-75D), mRNA
          Length = 3973

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 202 catctcggccaccagatcggc 222
           |||||||||||||||||||||
Sbjct: 920 catctcggccaccagatcggc 900
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>gb|AY075426.1| Drosophila melanogaster LD46604 full length cDNA
          Length = 3975

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 202 catctcggccaccagatcggc 222
           |||||||||||||||||||||
Sbjct: 901 catctcggccaccagatcggc 881
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>gb|BT024069.1| Zea mays clone EL01N0450D06 mRNA sequence
          Length = 2497

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 120  tcaccaaatgttgtcttctttcctgcgctagctgtaccagc 160
            |||||||| || |||||||||||||  |||||||| |||||
Sbjct: 2348 tcaccaaaggtggtcttctttcctgtactagctgtcccagc 2308



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 369  ggcttagcttcagcaacatacaagttgcagccaccaaggtc 409
            ||||| |||||| | ||||||||| || |||||||||||||
Sbjct: 2114 ggcttggcttcatcgacatacaagctgtagccaccaaggtc 2074



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 456  aaatccatgtaagctattcctttgcttgcacca 488
            ||||||||||| || |||||||||||| |||||
Sbjct: 2027 aaatccatgtacgccattcctttgcttacacca 1995
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>gb|AY105669.1| Zea mays PCO148095 mRNA sequence
          Length = 983

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 369 ggcttagcttcagcaacatacaagttgcagccaccaaggtc 409
           ||||| |||||| | ||||||||| || |||||||||||||
Sbjct: 876 ggcttggcttcatcgacatacaagctgtagccaccaaggtc 836



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 456 aaatccatgtaagctattcctttgcttgcacca 488
           ||||||||||| || |||||||||||| |||||
Sbjct: 789 aaatccatgtacgccattcctttgcttacacca 757
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>gb|AE003519.3| Drosophila melanogaster chromosome 3L, section 66 of 83 of the complete
             sequence
          Length = 294542

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   catctcggccaccagatcggc 222
             |||||||||||||||||||||
Sbjct: 36133 catctcggccaccagatcggc 36113
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>gb|AC159965.5| Mus musculus chromosome 15, clone RP23-471C16, complete sequence
          Length = 173156

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 124    caaatgttgtcttctttcctg 144
              |||||||||||||||||||||
Sbjct: 153118 caaatgttgtcttctttcctg 153138
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>emb|AL929037.3| Mouse DNA sequence from clone RP23-297K24 on chromosome 2, complete
              sequence
          Length = 156705

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 96     tgtggctcaaacagtttctaa 116
              |||||||||||||||||||||
Sbjct: 147855 tgtggctcaaacagtttctaa 147835
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>emb|AL732449.5| Mouse DNA sequence from clone RP23-191F11 on chromosome X, complete
             sequence
          Length = 160779

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   caaatgttgtcttctttcctg 144
             |||||||||||||||||||||
Sbjct: 28749 caaatgttgtcttctttcctg 28729
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>gb|AC121514.14| Mus musculus chromosome 8, clone RP24-394H9, complete sequence
          Length = 168316

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 264    ctgccgccgccatcacgaccacca 287
              |||||||||||||||| |||||||
Sbjct: 137364 ctgccgccgccatcaccaccacca 137387
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 203     atctcggccaccagatcggc 222
               ||||||||||||||||||||
Sbjct: 3286600 atctcggccaccagatcggc 3286581
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>gb|AC091295.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-360N5, complete
             sequence
          Length = 111108

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   aaatgttgtcttctttcctg 144
             ||||||||||||||||||||
Sbjct: 36723 aaatgttgtcttctttcctg 36742
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>gb|AC158936.4| Mus musculus chromosome 3, clone RP23-235P13, complete sequence
          Length = 160709

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    aaatgttgtcttctttcctg 144
              ||||||||||||||||||||
Sbjct: 145510 aaatgttgtcttctttcctg 145529
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>gb|AC135239.3| Mus musculus BAC clone RP23-324D2 from chromosome 3, complete
            sequence
          Length = 190178

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  aaatgttgtcttctttcctg 144
            ||||||||||||||||||||
Sbjct: 2418 aaatgttgtcttctttcctg 2437
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>gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 246705

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    caaatgttgtcttctttcct 143
              ||||||||||||||||||||
Sbjct: 155457 caaatgttgtcttctttcct 155438
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>emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in linkage group 2,
             complete sequence
          Length = 223248

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 454   taaaatccatgtaagctatt 473
             ||||||||||||||||||||
Sbjct: 40796 taaaatccatgtaagctatt 40815
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>gb|AC104884.10| Mus musculus chromosome 3, clone RP24-281E9, complete sequence
          Length = 168622

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   aaatgttgtcttctttcctg 144
             ||||||||||||||||||||
Sbjct: 35762 aaatgttgtcttctttcctg 35743
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>gb|AC148607.16| Medicago truncatula clone mth2-43g15, complete sequence
          Length = 148291

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   tacaagttgcagccaccaag 406
             ||||||||||||||||||||
Sbjct: 18436 tacaagttgcagccaccaag 18417
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>gb|AC162031.12| Medicago truncatula clone mth2-194a22, complete sequence
          Length = 123712

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   tacaagttgcagccaccaag 406
             ||||||||||||||||||||
Sbjct: 95886 tacaagttgcagccaccaag 95905
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>gb|AC137819.19| Medicago truncatula clone mth2-21i24, complete sequence
          Length = 116989

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   tacaagttgcagccaccaag 406
             ||||||||||||||||||||
Sbjct: 90266 tacaagttgcagccaccaag 90247
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>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5,
             complete sequence
          Length = 144909

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 450   tcagtaaaatccatgtaagctatt 473
             |||||||||||||||| |||||||
Sbjct: 37310 tcagtaaaatccatgttagctatt 37333
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>ref|XM_499995.1| Yarrowia lipolytica CLIB122, YALI0A11869g predicted mRNA
          Length = 4290

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 180  cctcggccacctcctctacc 199
            ||||||||||||||||||||
Sbjct: 1625 cctcggccacctcctctacc 1606
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>gb|AC158295.5| Mus musculus chromosome 8, clone RP24-208G23, complete sequence
          Length = 167209

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 264  ctgccgccgccatcacgaccacca 287
            |||||||||||||||| |||||||
Sbjct: 3970 ctgccgccgccatcaccaccacca 3947
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>emb|CR859732.1| Pongo pygmaeus mRNA; cDNA DKFZp468I108 (from clone DKFZp468I108)
          Length = 2768

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 263 cctgccgccgccatcacgaccacc 286
           |||||||||||||||||| |||||
Sbjct: 38  cctgccgccgccatcacggccacc 15



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 cctgccaccgccatcacggccacc 250
           |||||| |||||||||||||||||
Sbjct: 38  cctgccgccgccatcacggccacc 15
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>gb|AC087115.10| Mus Musculus Strain C57Bl6/J Chromosome 8 RP23-93A22, complete sequence
          Length = 181849

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 264    ctgccgccgccatcacgaccacca 287
              |||||||||||||||| |||||||
Sbjct: 178022 ctgccgccgccatcaccaccacca 177999
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>gb|AC144670.1| Homo sapiens chromosome 8, clone XXfos-85539D6, complete sequence
          Length = 37413

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 227   cctgccaccgccatcacggccacc 250
             |||||| |||||||||||||||||
Sbjct: 12070 cctgccgccgccatcacggccacc 12093



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   cctgccgccgccatcacgaccacc 286
             |||||||||||||||||| |||||
Sbjct: 12070 cctgccgccgccatcacggccacc 12093
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>gb|AC121769.4| Mus musculus BAC clone RP23-340N4 from chromosome 5, complete sequence
          Length = 186413

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    aaatgttgtcttctttcctg 144
              ||||||||||||||||||||
Sbjct: 168356 aaatgttgtcttctttcctg 168337
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>emb|BX323076.9| Zebrafish DNA sequence from clone DKEY-106A24 in linkage group 10,
              complete sequence
          Length = 156467

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    taaaatccatgtaagctatt 473
              ||||||||||||||||||||
Sbjct: 102887 taaaatccatgtaagctatt 102906
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>emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in linkage group 22,
             complete sequence
          Length = 180599

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 450   tcagtaaaatccatgtaagctatt 473
             |||||||||||||||| |||||||
Sbjct: 55449 tcagtaaaatccatgttagctatt 55472
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>dbj|AP006545.1| Homo sapiens genomic DNA, chromosome 8p11.21, clone: KB1836B05, complete
              sequence
          Length = 156888

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 227    cctgccaccgccatcacggccacc 250
              |||||| |||||||||||||||||
Sbjct: 146532 cctgccgccgccatcacggccacc 146509



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 263    cctgccgccgccatcacgaccacc 286
              |||||||||||||||||| |||||
Sbjct: 146532 cctgccgccgccatcacggccacc 146509
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>emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, complete sequence
          Length = 152969

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 454   taaaatccatgtaagctatt 473
             ||||||||||||||||||||
Sbjct: 27858 taaaatccatgtaagctatt 27839
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>gb|AC152923.2| Mus musculus BAC clone RP24-267O6 from 5, complete sequence
          Length = 187438

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   aaatgttgtcttctttcctg 144
             ||||||||||||||||||||
Sbjct: 22222 aaatgttgtcttctttcctg 22203
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 180     cctcggccacctcctctacc 199
               ||||||||||||||||||||
Sbjct: 1245460 cctcggccacctcctctacc 1245441
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>emb|AL844871.11| Mouse DNA sequence from clone RP23-271B15 on chromosome 2, complete
             sequence
          Length = 179754

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   tcttctttcctgcgctagct 152
             ||||||||||||||||||||
Sbjct: 39162 tcttctttcctgcgctagct 39143
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>emb|AL772236.11| Mouse DNA sequence from clone RP23-98F14 on chromosome 4, complete
             sequence
          Length = 207430

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   cactctgcctgctctgatag 179
             ||||||||||||||||||||
Sbjct: 53140 cactctgcctgctctgatag 53159
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>dbj|AB022785.1| Homo sapiens ASH2L gene, complete cds, similar to Drosophila ash2
           gene
          Length = 34200

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 263 cctgccgccgccatcacgaccacc 286
           |||||||||||||||||| |||||
Sbjct: 106 cctgccgccgccatcacggccacc 83



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 cctgccaccgccatcacggccacc 250
           |||||| |||||||||||||||||
Sbjct: 106 cctgccgccgccatcacggccacc 83
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>dbj|AB020982.1| Homo sapiens ASH2L mRNA, complete cds, similar to Drosophila ash2
           sequence
          Length = 2368

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 263 cctgccgccgccatcacgaccacc 286
           |||||||||||||||||| |||||
Sbjct: 25  cctgccgccgccatcacggccacc 2



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 cctgccaccgccatcacggccacc 250
           |||||| |||||||||||||||||
Sbjct: 25  cctgccgccgccatcacggccacc 2
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>dbj|AP000065.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 1/19
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 227   cctgccaccgccatcacggccacc 250
             |||||| |||||||||||||||||
Sbjct: 69539 cctgccgccgccatcacggccacc 69562



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   cctgccgccgccatcacgaccacc 286
             |||||||||||||||||| |||||
Sbjct: 69539 cctgccgccgccatcacggccacc 69562


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,936,207
Number of Sequences: 3902068
Number of extensions: 3936207
Number of successful extensions: 82471
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82043
Number of HSP's gapped (non-prelim): 421
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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