ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags39b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009092.1| Triticum aestivum clone wkm2c.pk005.b12:fis, full... 103 6e-19
2ref|XM_521482.1| PREDICTED: Pan troglodytes similar to coiled-co... 46 0.11
3ref|NM_005436.2| Homo sapiens coiled-coil domain containing 6 (C... 46 0.11
4gb|BC036757.2| Homo sapiens coiled-coil domain containing 6, mRN... 46 0.11
5gb|BC022284.1| Homo sapiens coiled-coil domain containing 6, mRN... 46 0.11
6gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, com... 46 0.11
7gb|S77910.1| H4=gene frequently rearranged with the ret proto-on... 46 0.11
8dbj|D90075.1|HUMRETTPC Homo sapiens mRNA for ret-TPC, partial cds 46 0.11
9gb|BC064391.1| Homo sapiens coiled-coil domain containing 6, mRN... 46 0.11
10gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome... 42 1.7
11gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987... 42 1.7
12gb|AC104287.8| Drosophila melanogaster X BAC RP98-29P19 (Roswell... 42 1.7
13gb|AC091609.2| Homo sapiens chromosome 1 clone RP11-109I2, compl... 42 1.7
14gb|AC094107.3| Homo sapiens chromosome 5 clone RP11-48L3, comple... 42 1.7
15emb|AL954339.10| Zebrafish DNA sequence from clone CH211-221J21 ... 42 1.7
16gb|AE003419.2| Drosophila melanogaster chromosome X, section 3 o... 42 1.7
17emb|AL132651.2|DMC103E12 Drosophila melanogaster cosmid clone 10... 42 1.7
18gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 6.9
19ref|NM_195517.1| Oryza sativa (japonica cultivar-group) putative... 40 6.9
20ref|NM_196082.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.9
21ref|XM_463264.1| Oryza sativa (japonica cultivar-group), predic... 40 6.9
22gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
23gb|AY684169.1| Homo sapiens REV3-like, catalytic subunit of DNA ... 40 6.9
24gb|AY596612.1| Saccharum officinarum clone SCCCCL4009E01, comple... 40 6.9
25gb|AC164640.4| Mus musculus BAC clone RP23-228M12 from chromosom... 40 6.9
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.9
27ref|XM_854298.1| PREDICTED: Canis familiaris similar to brefeldi... 40 6.9
28ref|XM_854261.1| PREDICTED: Canis familiaris similar to brefeldi... 40 6.9
29ref|XM_854229.1| PREDICTED: Canis familiaris similar to brefeldi... 40 6.9
30ref|XM_854191.1| PREDICTED: Canis familiaris similar to brefeldi... 40 6.9
31ref|XM_535095.2| PREDICTED: Canis familiaris similar to brefeldi... 40 6.9
32gb|AC127317.3| Mus musculus BAC clone RP23-227H18 from chromosom... 40 6.9
33gb|AC132685.3| Mus musculus BAC clone RP23-278G24 from chromosom... 40 6.9
34emb|Z81091.1|CEF55H12 Caenorhabditis elegans Cosmid F55H12, comp... 40 6.9
35emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in... 40 6.9
36gb|AE014075.1| Escherichia coli CFT073, complete genome 40 6.9
37gb|BC049271.1| Mus musculus solute carrier family 38, member 2, ... 40 6.9
38gb|CP000243.1| Escherichia coli UTI89, complete genome 40 6.9
39emb|AL512325.9| Human DNA sequence from clone RP3-442M11 on chro... 40 6.9
40gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 6.9
41emb|AL139395.7| Human DNA sequence from clone RP11-130N24 on chr... 40 6.9
42gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 geno... 40 6.9
43gb|U00006.1|ECOUW89 E. coli chromosomal region from 89.2 to 92.8... 40 6.9
44gb|BC019690.1| Mus musculus solute carrier family 38, member 2, ... 40 6.9
45dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 6.9
46gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0... 40 6.9
47gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 geno... 40 6.9
48gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.9
49gb|AC093180.12| Oryza sativa chromosome 3 BAC OJ1004_D04 genomic... 40 6.9
50ref|XM_685624.1| PREDICTED: Danio rerio similar to 2310021P13Rik... 40 6.9
51gb|BC097203.1| Danio rerio cDNA clone IMAGE:7452926, partial cds 40 6.9
52dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
53dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
54dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
55dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
56dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
57dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
58dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
59dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
60dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
61gb|AC040160.4|AC040160 Homo sapiens chromosome 16 clone CTC-277H... 40 6.9
62gb|AC089995.1|AC089995 Caenorhabditis briggsae cosmid CB035H18, ... 40 6.9
63gb|AC116351.2| Homo sapiens chromosome 5 clone RP11-43F13, compl... 40 6.9
64gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 6.9
65dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
66dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
67dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
68dbj|AP004132.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
69dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
70dbj|AP005648.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
71dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
72dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
73dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
74dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
75dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
76dbj|AK109791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
77gb|AY112243.1| Zea mays CL22436_1 mRNA sequence 40 6.9
78gb|AC136738.23| Mus musculus chromosome 6, clone RP23-173F22, co... 40 6.9
79gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
80gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
81gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
82emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116... 40 6.9
83emb|AL844877.2|CNS08CB0 Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.9
84gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 6.9
85dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 6.9
86gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 6.9
87gb|AC155918.1| Oryza sativa (japonica cultivar-group) BAC clone ... 40 6.9
88gb|AC127320.4| Mus musculus BAC clone RP23-230O23 from chromosom... 40 6.9
89gb|CP000036.1| Shigella boydii Sb227, complete genome 40 6.9
90gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 6.9
91gb|M10112.1|ECOBTUB E.coli btuB gene for the vitamin B12 recepto... 40 6.9 
>gb|BT009092.1| Triticum aestivum clone wkm2c.pk005.b12:fis, full insert mRNA
           sequence
          Length = 1012

 Score =  103 bits (52), Expect = 6e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                       
Query: 374 gccgggttgctgctcaccgacttgaaactgctgcatcgttggaccatgccggctgcgctg 433
           ||||||||||||||||| |||||||||||||||| ||| ||||||||||| ||| |||||
Sbjct: 582 gccgggttgctgctcacggacttgaaactgctgcttcgctggaccatgccagctccgctg 523

                                   
Query: 434 ttgattagattgctgggccccgtc 457
           ||||| ||||| || |||||||||
Sbjct: 522 ttgatcagattactaggccccgtc 499



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 213 gtcacatgttccacgagtacgcgccgcctccctgctgctcctccaagaacagcccgctct 272
           |||| |||||||||||| |  ||||| | ||| |||||||| ||| ||||||||||||||
Sbjct: 734 gtcagatgttccacgagaagccgccgtcccccggctgctcccccatgaacagcccgctct 675

                                                                       
Query: 273 ccgcgagttcgctgctgatgagatggtccagctcgggcacctcgtgcatggactccgcct 332
           || |||| |||  |  ||||||||| ||||| |||  ||  |||||||  ||||||||||
Sbjct: 674 ccacgagctcgtgggagatgagatgttccaggtcgtccatgtcgtgcacagactccgcct 615

            
Query: 333 t 333
           |
Sbjct: 614 t 614



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 11  tagttaataacactggcttgcactgct 37
           |||||||||||||||| ||||||||||
Sbjct: 923 tagttaataacactgggttgcactgct 897



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 64  cactctcacataactgaaggtt 85
           ||||||||||||||||||||||
Sbjct: 883 cactctcacataactgaaggtt 862
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>ref|XM_521482.1| PREDICTED: Pan troglodytes similar to coiled-coil domain containing
           6 (LOC466080), mRNA
          Length = 2436

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 234 cgccgcctccctgctgctcctcc 256
           |||||||||||||||||||||||
Sbjct: 539 cgccgcctccctgctgctcctcc 561
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>ref|NM_005436.2| Homo sapiens coiled-coil domain containing 6 (CCDC6), mRNA
          Length = 5702

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 234 cgccgcctccctgctgctcctcc 256
           |||||||||||||||||||||||
Sbjct: 80  cgccgcctccctgctgctcctcc 102
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>gb|BC036757.2| Homo sapiens coiled-coil domain containing 6, mRNA (cDNA clone
           IMAGE:5549623), containing frame-shift errors
          Length = 5664

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 234 cgccgcctccctgctgctcctcc 256
           |||||||||||||||||||||||
Sbjct: 25  cgccgcctccctgctgctcctcc 47
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>gb|BC022284.1| Homo sapiens coiled-coil domain containing 6, mRNA (cDNA clone
           IMAGE:4762273), containing frame-shift errors
          Length = 1130

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 234 cgccgcctccctgctgctcctcc 256
           |||||||||||||||||||||||
Sbjct: 80  cgccgcctccctgctgctcctcc 102
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>gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, complete sequence
          Length = 190712

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 234    cgccgcctccctgctgctcctcc 256
              |||||||||||||||||||||||
Sbjct: 137123 cgccgcctccctgctgctcctcc 137145
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>gb|S77910.1| H4=gene frequently rearranged with the ret proto-oncogene
           {promoter} [human, Genomic, 447 nt]
          Length = 447

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 234 cgccgcctccctgctgctcctcc 256
           |||||||||||||||||||||||
Sbjct: 395 cgccgcctccctgctgctcctcc 417
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>dbj|D90075.1|HUMRETTPC Homo sapiens mRNA for ret-TPC, partial cds
          Length = 457

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 234 cgccgcctccctgctgctcctcc 256
           |||||||||||||||||||||||
Sbjct: 9   cgccgcctccctgctgctcctcc 31
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>gb|BC064391.1| Homo sapiens coiled-coil domain containing 6, mRNA (cDNA clone
           MGC:75097 IMAGE:5745698), complete cds
          Length = 2700

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 234 cgccgcctccctgctgctcctcc 256
           |||||||||||||||||||||||
Sbjct: 12  cgccgcctccctgctgctcctcc 34
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>gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome 13, complete sequence
          Length = 155751

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 361   agccacagcagcagccgggtt 381
             |||||||||||||||||||||
Sbjct: 46745 agccacagcagcagccgggtt 46765
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>gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-100B4  ~complete genomic
              sequence, complete sequence
          Length = 174826

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 145    aaaaaagacaaaaagttcaaataatctaa 173
              |||||| | ||||||||||||||||||||
Sbjct: 107109 aaaaaaaaaaaaaagttcaaataatctaa 107137
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>gb|AC104287.8| Drosophila melanogaster X BAC RP98-29P19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 169557

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 236   ccgcctccctgctgctcctcc 256
             |||||||||||||||||||||
Sbjct: 66262 ccgcctccctgctgctcctcc 66282
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>gb|AC091609.2| Homo sapiens chromosome 1 clone RP11-109I2, complete sequence
          Length = 183521

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   gcctccctgctgctcctccaa 258
             |||||||||||||||||||||
Sbjct: 30861 gcctccctgctgctcctccaa 30841
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>gb|AC094107.3| Homo sapiens chromosome 5 clone RP11-48L3, complete sequence
          Length = 99286

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 356   gaagtagccacagcagcagcc 376
             |||||||||||||||||||||
Sbjct: 88274 gaagtagccacagcagcagcc 88294
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>emb|AL954339.10| Zebrafish DNA sequence from clone CH211-221J21 in linkage group 12,
              complete sequence
          Length = 203958

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 154    aaaaagttcaaataatctaaa 174
              |||||||||||||||||||||
Sbjct: 173021 aaaaagttcaaataatctaaa 173041
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>gb|AE003419.2| Drosophila melanogaster chromosome X, section 3 of 74 of the complete
              sequence
          Length = 306598

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 236    ccgcctccctgctgctcctcc 256
              |||||||||||||||||||||
Sbjct: 201844 ccgcctccctgctgctcctcc 201824
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>emb|AL132651.2|DMC103E12 Drosophila melanogaster cosmid clone 103E12
          Length = 42095

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 236  ccgcctccctgctgctcctcc 256
            |||||||||||||||||||||
Sbjct: 5289 ccgcctccctgctgctcctcc 5269
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 4184318 taaagcgttttacttaaaaa 4184299
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>ref|NM_195517.1| Oryza sativa (japonica cultivar-group) putative polyprotein
           (OSJNBa0082N11.15), mRNA
          Length = 1692

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 ctctccgcgagttcgctgct 288
           ||||||||||||||||||||
Sbjct: 14  ctctccgcgagttcgctgct 33
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>ref|NM_196082.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0089F16.9), mRNA
          Length = 2067

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 ctctccgcgagttcgctgct 288
           ||||||||||||||||||||
Sbjct: 155 ctctccgcgagttcgctgct 174
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>ref|XM_463264.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 225

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 ctctccgcgagttcgctgct 288
           ||||||||||||||||||||
Sbjct: 65  ctctccgcgagttcgctgct 84
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
             complete sequence
          Length = 187972

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 91488 ctctccgcgagttcgctgct 91507
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>gb|AY684169.1| Homo sapiens REV3-like, catalytic subunit of DNA polymerase zeta
             (yeast) (REV3L) gene, complete cds
          Length = 188355

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   aaaaagacaaaaagttcaaa 165
             ||||||||||||||||||||
Sbjct: 43298 aaaaagacaaaaagttcaaa 43317
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>gb|AY596612.1| Saccharum officinarum clone SCCCCL4009E01, complete sequence
          Length = 2352

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 368 gcagcagccgggttgctgctcaccgacttgaa 399
           |||||||| ||  |||||||||||||||||||
Sbjct: 532 gcagcagctggactgctgctcaccgacttgaa 563
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>gb|AC164640.4| Mus musculus BAC clone RP23-228M12 from chromosome 7, complete sequence
          Length = 232468

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   gcctccctgctgctcctcca 257
             ||||||||||||||||||||
Sbjct: 65603 gcctccctgctgctcctcca 65584
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 18587168 ctctccgcgagttcgctgct 18587187
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>ref|XM_854298.1| PREDICTED: Canis familiaris similar to brefeldin A-inhibited guanine
            nucleotide-exchange protein 1, transcript variant 6
            (LOC477903), mRNA
          Length = 6883

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  aaaaaagacaaaaagttcaa 164
            ||||||||||||||||||||
Sbjct: 6285 aaaaaagacaaaaagttcaa 6266
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>ref|XM_854261.1| PREDICTED: Canis familiaris similar to brefeldin A-inhibited guanine
            nucleotide-exchange protein 1, transcript variant 5
            (LOC477903), mRNA
          Length = 6739

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  aaaaaagacaaaaagttcaa 164
            ||||||||||||||||||||
Sbjct: 6141 aaaaaagacaaaaagttcaa 6122
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>ref|XM_854229.1| PREDICTED: Canis familiaris similar to brefeldin A-inhibited guanine
            nucleotide-exchange protein 1, transcript variant 4
            (LOC477903), mRNA
          Length = 6868

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  aaaaaagacaaaaagttcaa 164
            ||||||||||||||||||||
Sbjct: 6270 aaaaaagacaaaaagttcaa 6251
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>ref|XM_854191.1| PREDICTED: Canis familiaris similar to brefeldin A-inhibited guanine
            nucleotide-exchange protein 1, transcript variant 3
            (LOC477903), mRNA
          Length = 6826

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  aaaaaagacaaaaagttcaa 164
            ||||||||||||||||||||
Sbjct: 6228 aaaaaagacaaaaagttcaa 6209
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>ref|XM_535095.2| PREDICTED: Canis familiaris similar to brefeldin A-inhibited guanine
            nucleotide-exchange protein 1, transcript variant 1
            (LOC477903), mRNA
          Length = 7230

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  aaaaaagacaaaaagttcaa 164
            ||||||||||||||||||||
Sbjct: 6632 aaaaaagacaaaaagttcaa 6613
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>gb|AC127317.3| Mus musculus BAC clone RP23-227H18 from chromosome 7, complete
            sequence
          Length = 180376

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 44   tttcccagccagatccctcacact 67
            ||||||||||||||||||| ||||
Sbjct: 9073 tttcccagccagatccctcccact 9096
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>gb|AC132685.3| Mus musculus BAC clone RP23-278G24 from chromosome 7, complete sequence
          Length = 188989

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    tttcccagccagatccctcacact 67
             ||||||||||||||||||| ||||
Sbjct: 48777 tttcccagccagatccctcccact 48754
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>emb|Z81091.1|CEF55H12 Caenorhabditis elegans Cosmid F55H12, complete sequence
          Length = 38070

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   gaaaaaagacaaaaagttca 163
             ||||||||||||||||||||
Sbjct: 11121 gaaaaaagacaaaaagttca 11140
to top
>emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in linkage group 9,
             complete sequence
          Length = 103882

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   aaagttcaaataatctaaag 175
             ||||||||||||||||||||
Sbjct: 44747 aaagttcaaataatctaaag 44728
to top
>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 4696710 taaagcgttttacttaaaaa 4696691
to top
>gb|BC049271.1| Mus musculus solute carrier family 38, member 2, mRNA (cDNA clone
            IMAGE:3984227), partial cds
          Length = 3659

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  aagttcaaataatctaaagc 176
            ||||||||||||||||||||
Sbjct: 3386 aagttcaaataatctaaagc 3405
to top
>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 4454014 taaagcgttttacttaaaaa 4453995
to top
>emb|AL512325.9| Human DNA sequence from clone RP3-442M11 on chromosome 6, complete
             sequence
          Length = 65646

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   aaaaagacaaaaagttcaaa 165
             ||||||||||||||||||||
Sbjct: 50392 aaaaagacaaaaagttcaaa 50373
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 4162329 taaagcgttttacttaaaaa 4162310
to top
>emb|AL139395.7| Human DNA sequence from clone RP11-130N24 on chromosome Xq13.3-21.2
              Contains the 3' end of gene KIAA2022, complete sequence
          Length = 146610

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    aaaaaagacaaaaagttcaaataa 168
              |||||||||||||| |||||||||
Sbjct: 120908 aaaaaagacaaaaacttcaaataa 120931
to top
>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence, complete
             sequence
          Length = 106110

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 86000 ctctccgcgagttcgctgct 86019
to top
>gb|U00006.1|ECOUW89 E. coli chromosomal region from 89.2 to 92.8 minutes
          Length = 176195

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   taaagcgttttacttaaaaa 190
             ||||||||||||||||||||
Sbjct: 29548 taaagcgttttacttaaaaa 29529
to top
>gb|BC019690.1| Mus musculus solute carrier family 38, member 2, mRNA (cDNA clone
            IMAGE:3491773), partial cds
          Length = 1367

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  aagttcaaataatctaaagc 176
            ||||||||||||||||||||
Sbjct: 1085 aagttcaaataatctaaagc 1104
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 3472375 taaagcgttttacttaaaaa 3472394
to top
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic
             sequence, complete sequence
          Length = 147289

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 72720 ctctccgcgagttcgctgct 72739
to top
>gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 genomic sequence, complete
              sequence
          Length = 154696

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    ctctccgcgagttcgctgct 288
              ||||||||||||||||||||
Sbjct: 140742 ctctccgcgagttcgctgct 140723
to top
>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0082N11, from chromosome 10, complete sequence
          Length = 183345

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 73255 ctctccgcgagttcgctgct 73274
to top
>gb|AC093180.12| Oryza sativa chromosome 3 BAC OJ1004_D04 genomic sequence, complete
             sequence
          Length = 158170

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 50509 ctctccgcgagttcgctgct 50490
to top
>ref|XM_685624.1| PREDICTED: Danio rerio similar to 2310021P13Rik protein (LOC562226),
            mRNA
          Length = 7143

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 237  cgcctccctgctgctcctcc 256
            ||||||||||||||||||||
Sbjct: 6150 cgcctccctgctgctcctcc 6169
to top
>gb|BC097203.1| Danio rerio cDNA clone IMAGE:7452926, partial cds
          Length = 920

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 ctgctgctcctccaagaaca 263
           ||||||||||||||||||||
Sbjct: 127 ctgctgctcctccaagaaca 108
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 20272863 ctctccgcgagttcgctgct 20272882



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     ctctccgcgagttcgctgct 288
               ||||||||||||||||||||
Sbjct: 8640031 ctctccgcgagttcgctgct 8640012
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     ctctccgcgagttcgctgct 288
               ||||||||||||||||||||
Sbjct: 6471510 ctctccgcgagttcgctgct 6471491
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 10982632 ctctccgcgagttcgctgct 10982613



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 269     ctctccgcgagttcgctgct 288
               ||||||||||||||||||||
Sbjct: 7439391 ctctccgcgagttcgctgct 7439410
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 13769500 ctctccgcgagttcgctgct 13769519



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 12754309 ctctccgcgagttcgctgct 12754328



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 269     ctctccgcgagttcgctgct 288
               ||||||||||||||||||||
Sbjct: 8718634 ctctccgcgagttcgctgct 8718653
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 232     cgcgccgcctccctgctgctcctc 255
               ||||||||| ||||||||||||||
Sbjct: 5036599 cgcgccgccgccctgctgctcctc 5036576
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 20424945 ctctccgcgagttcgctgct 20424964



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     ctctccgcgagttcgctgct 288
               ||||||||||||||||||||
Sbjct: 9183831 ctctccgcgagttcgctgct 9183812
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 18581209 ctctccgcgagttcgctgct 18581228
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 16892711 ctctccgcgagttcgctgct 16892692



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 14873935 ctctccgcgagttcgctgct 14873954
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 17513762 ctctccgcgagttcgctgct 17513781
to top
>gb|AC040160.4|AC040160 Homo sapiens chromosome 16 clone CTC-277H1, complete sequence
          Length = 209574

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 239   cctccctgctgctcctccaagaac 262
             |||||| |||||||||||||||||
Sbjct: 99748 cctcccagctgctcctccaagaac 99725
to top
>gb|AC089995.1|AC089995 Caenorhabditis briggsae cosmid CB035H18, complete sequence
          Length = 79459

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   aaaaagacaaaaagttcaaa 165
             ||||||||||||||||||||
Sbjct: 27468 aaaaagacaaaaagttcaaa 27449
to top
>gb|AC116351.2| Homo sapiens chromosome 5 clone RP11-43F13, complete sequence
          Length = 187289

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 235    gccgcctccctgctgctcctccaa 258
              |||||||||| |||||||||||||
Sbjct: 110742 gccgcctcccagctgctcctccaa 110765
to top
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 3588901 taaagcgttttacttaaaaa 3588920
to top
>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436D06
          Length = 148246

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 31334 ctctccgcgagttcgctgct 31353
to top
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0662B01
          Length = 155913

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 77853 ctctccgcgagttcgctgct 77834
to top
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0016D02
          Length = 157822

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    ctctccgcgagttcgctgct 288
              ||||||||||||||||||||
Sbjct: 148340 ctctccgcgagttcgctgct 148359
to top
>dbj|AP004132.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1089_A02
          Length = 117908

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 34816 ctctccgcgagttcgctgct 34797
to top
>dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036H07
          Length = 149797

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 93768 ctctccgcgagttcgctgct 93749
to top
>dbj|AP005648.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0055I13
          Length = 169486

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    ctctccgcgagttcgctgct 288
              ||||||||||||||||||||
Sbjct: 139738 ctctccgcgagttcgctgct 139757
to top
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0049I08
          Length = 144379

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 232   cgcgccgcctccctgctgctcctc 255
             ||||||||| ||||||||||||||
Sbjct: 78288 cgcgccgccgccctgctgctcctc 78265
to top
>dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0406D01
          Length = 163932

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 83569 ctctccgcgagttcgctgct 83588
to top
>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0058D03
          Length = 184235

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 98304 ctctccgcgagttcgctgct 98323
to top
>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0051M20
          Length = 152702

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    ctctccgcgagttcgctgct 288
              ||||||||||||||||||||
Sbjct: 140278 ctctccgcgagttcgctgct 140297
to top
>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0070J06
          Length = 142303

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   ctctccgcgagttcgctgct 288
             ||||||||||||||||||||
Sbjct: 61613 ctctccgcgagttcgctgct 61632
to top
>dbj|AK109791.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D09, full
           insert sequence
          Length = 1855

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 232 cgcgccgcctccctgctgctcctc 255
           ||||||||| ||||||||||||||
Sbjct: 576 cgcgccgccgccctgctgctcctc 553
to top
>gb|AY112243.1| Zea mays CL22436_1 mRNA sequence
          Length = 669

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 380 ttgctgctcaccgacttgaaactg 403
           |||||||| |||||||||||||||
Sbjct: 414 ttgctgcttaccgacttgaaactg 391
to top
>gb|AC136738.23| Mus musculus chromosome 6, clone RP23-173F22, complete sequence
          Length = 195153

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   aaaaagttcaaataatctaa 173
             ||||||||||||||||||||
Sbjct: 27070 aaaaagttcaaataatctaa 27051
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 10988676 ctctccgcgagttcgctgct 10988657



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 269     ctctccgcgagttcgctgct 288
               ||||||||||||||||||||
Sbjct: 7443590 ctctccgcgagttcgctgct 7443609
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     ctctccgcgagttcgctgct 288
               ||||||||||||||||||||
Sbjct: 6537977 ctctccgcgagttcgctgct 6537958
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 269      ctctccgcgagttcgctgct 288
                ||||||||||||||||||||
Sbjct: 20199077 ctctccgcgagttcgctgct 20199096



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     ctctccgcgagttcgctgct 288
               ||||||||||||||||||||
Sbjct: 8639914 ctctccgcgagttcgctgct 8639895
to top
>emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116_G12 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152862

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    ctctccgcgagttcgctgct 288
              ||||||||||||||||||||
Sbjct: 137097 ctctccgcgagttcgctgct 137116
to top
>emb|AL844877.2|CNS08CB0 Oryza sativa chromosome 12, . BAC OSJNBb0034B07 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 125000

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    ctctccgcgagttcgctgct 288
              ||||||||||||||||||||
Sbjct: 102778 ctctccgcgagttcgctgct 102759
to top
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 5042337 taaagcgttttacttaaaaa 5042318
to top
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 4973571 taaagcgttttacttaaaaa 4973552
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 3494100 taaagcgttttacttaaaaa 3494119
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>gb|AC155918.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBa0071K05,
            complete sequence
          Length = 32941

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  ctctccgcgagttcgctgct 288
            ||||||||||||||||||||
Sbjct: 7156 ctctccgcgagttcgctgct 7175
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>gb|AC127320.4| Mus musculus BAC clone RP23-230O23 from chromosome 6, complete sequence
          Length = 197402

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    aaaaagttcaaataatctaa 173
              ||||||||||||||||||||
Sbjct: 113343 aaaaagttcaaataatctaa 113324
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 4022887 taaagcgttttacttaaaaa 4022868
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     taaagcgttttacttaaaaa 190
               ||||||||||||||||||||
Sbjct: 4383691 taaagcgttttacttaaaaa 4383672
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>gb|M10112.1|ECOBTUB E.coli btuB gene for the vitamin B12 receptor protein BtuB
          Length = 2220

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 taaagcgttttacttaaaaa 190
           ||||||||||||||||||||
Sbjct: 979 taaagcgttttacttaaaaa 960


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,274,518
Number of Sequences: 3902068
Number of extensions: 4274518
Number of successful extensions: 104870
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103947
Number of HSP's gapped (non-prelim): 923
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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