ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CEND1_HUMAN (Q8WZ64) Centaurin-delta 1 (Cnt-d1) (Arf-GAP, Rho-GA... 28 5.9

>CEND1_HUMAN (Q8WZ64) Centaurin-delta 1 (Cnt-d1) (Arf-GAP, Rho-GAP, ankyrin|
           repeat and pleckstrin homology domain-containing protein
           2) (PARX protein)
          Length = 1704

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 80  LYNVIHRKNAENLPHMDAFIPSPQKKTCIEXSNA 181
           +Y  +H+    + P  D  +PS  +  CIE SN+
Sbjct: 76  IYANVHKTKKNDDPSKDYHVPSSDQNICIELSNS 109


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,673,676
Number of Sequences: 219361
Number of extensions: 571486
Number of successful extensions: 920
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top