| Clone Name | rbaal2g07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC140251.2| Mus musculus BAC clone RP24-289C19 from chromosome 12, complete sequence Length = 177652 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 atgtcattcacaggaaaaatg 107 ||||||||||||||||||||| Sbjct: 81851 atgtcattcacaggaaaaatg 81871
>gb|AC073090.8| Homo sapiens BAC clone RP11-328J2 from 7, complete sequence Length = 116557 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aggaaaaatgcagagaatct 117 |||||||||||||||||||| Sbjct: 6591 aggaaaaatgcagagaatct 6572
>emb|AL445604.9| Human DNA sequence from clone RP11-661D17 on chromosome 13 Contains a CpG island, complete sequence Length = 174615 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aggaaaaatgcagagaatct 117 |||||||||||||||||||| Sbjct: 119702 aggaaaaatgcagagaatct 119683
>emb|AL136318.13| Human DNA sequence from clone RP1-254P11 on chromosome 10 Contains a transcription elongation factor B (SIII) polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene, complete sequence Length = 55284 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aggaaaaatgcagagaatct 117 |||||||||||||||||||| Sbjct: 8758 aggaaaaatgcagagaatct 8739
>gb|AF279873.4| Homo sapiens chromosome 8 clone RP1-25D10, RP1-273G13, RP1-103E7 map 8p21-p11, complete sequence Length = 301232 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aggaaaaatgcagagaatct 117 |||||||||||||||||||| Sbjct: 33093 aggaaaaatgcagagaatct 33074
>emb|AL357172.3|CNS05TDW Human chromosome 14 DNA sequence BAC R-789A21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 198714 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 aaaaatgcagagaatcttcctcac 124 ||||||||||||||||| |||||| Sbjct: 180480 aaaaatgcagagaatctgcctcac 180503
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105 Length = 340000 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aggaaaaatgcagagaatct 117 |||||||||||||||||||| Sbjct: 8681 aggaaaaatgcagagaatct 8662
>dbj|AP001341.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B266G18, LL56-APP region, complete sequence Length = 122318 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aggaaaaatgcagagaatct 117 |||||||||||||||||||| Sbjct: 67424 aggaaaaatgcagagaatct 67405
>emb|AL359682.4|CNS05TF0 Human chromosome 14 DNA sequence BAC C-2561F5 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 116067 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aggaaaaatgcagagaatct 117 |||||||||||||||||||| Sbjct: 24269 aggaaaaatgcagagaatct 24288 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,185,162 Number of Sequences: 3902068 Number of extensions: 2185162 Number of successful extensions: 44314 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44297 Number of HSP's gapped (non-prelim): 17 length of query: 298 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 276 effective length of database: 17,147,199,772 effective search space: 4732627137072 effective search space used: 4732627137072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)