ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags39b03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 1199 bits (605), Expect = 0.0 Identities = 628/633 (99%), Gaps = 2/633 (0%) Strand = Plus / Minus Query: 13 cataatatatcc-tggaacttttatattaagcca-gggtacaaatagattcatcgtggcg 70 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 633 cataatatatccatggaacttttatattaagccaagggtacaaatagattcatcgtggcg 574 Query: 71 actcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggcttcca 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 actcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggcttcca 514 Query: 131 tacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaa 190 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 513 tacagctgatggtatcaagattattcaagacaaaatgacaatacgaccatggccatagaa 454 Query: 191 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 394 Query: 251 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 334 Query: 311 aacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 333 aacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgcgtgac 274 Query: 371 atctggttcaccggattcagggagaagattcagtttaggatagtcactagggcattttgg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 atctggttcaccggattcagggagaagattcagtttaggatagtcactagggcattttgg 214 Query: 431 accacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaa 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 accacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaa 154 Query: 491 acggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 550 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 atggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 94 Query: 551 ctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatact 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 ctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatact 34 Query: 611 cttgctgggtgccatggttggcttcttggcttt 643 ||||||||||||||||||||||||||||||||| Sbjct: 33 cttgctgggtgccatggttggcttcttggcttt 1
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 1166 bits (588), Expect = 0.0 Identities = 638/651 (98%), Gaps = 3/651 (0%) Strand = Plus / Minus Query: 1 ttgtagtgtatn-cataatatatcc-tggaacttttatattaagcca-gggtacaaatag 57 ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 653 ttgtagtgtatcacataatatatccatggaacttttatattaagccaagggtacaaatag 594 Query: 58 attcatcgtggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgat 117 ||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||| Sbjct: 593 attcatcgtggcgacccttattggaacaagggaaaaacagaaatgcataagtaagatgat 534 Query: 118 acattggcttccatacagctgatggtatcaagattattcaagacaaaatgacaatacgac 177 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 acatttccttcgatacagctgatggtatcaagattattcaagacaaaatgacaatacgac 474 Query: 178 cttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactg 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 cttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactg 414 Query: 238 caccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatct 297 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 caccatcattacaaaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatct 354 Query: 298 cttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 353 cttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgc 294 Query: 358 agtactgagtgacatctggttcaccggattcagggagaagattcagtttaggatagtcac 417 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 293 agtactgagtgacatctggttcaccggattcagggagaagattaagtttaggatagtcac 234 Query: 418 tagggcattttggaccacttatgattttacaacgacaagcacctgcgcagactggacggg 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tagggcattttggaccacttatgattttacaacgacaagcacctgcgcagactggacggg 174 Query: 478 aaccacccgcgaaacggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaac 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 aaccacccgcgaaacggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaac 114 Query: 538 tttttccctccacctggacctgctccagaactaaacccagtatgagaacacaaatgacca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 tttttccctccacctggacctgctccagaactaaacccagtatgagaacacaaatgacca 54 Query: 598 cactcttaatactcttgctgggtgccatggttggcttcttggctttaattt 648 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53 cactcttaatactcttgctgggtgccatggttggcttcttggctttaattt 3
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 761 bits (384), Expect = 0.0 Identities = 427/440 (97%), Gaps = 1/440 (0%) Strand = Plus / Minus Query: 32 tttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaacaaggga 90 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 440 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggga 381 Query: 91 aaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtatcaaga 150 |||| | |||| |||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 380 aaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaaga 321 Query: 151 ttattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcatg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 ttattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcatg 261 Query: 211 attaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgc 270 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 260 attaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgttgc 201 Query: 271 tgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcac 330 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 200 tgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtccatgttgtcac 141 Query: 331 agacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcag 390 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 140 agacagaattcctgcatccaatggtgcagtactgagtgacatcgggttcaccggattcag 81 Query: 391 ggagaagattcagtttaggatagtcactagggcattttggaccacttatgattttacaac 450 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 ggagaagattaagtttaggatagtcactagggcattttggaccacttatgattttacaac 21 Query: 451 gacaagcacctgcgcagact 470 |||||||||||||||||||| Sbjct: 20 gacaagcacctgcgcagact 1
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 728 bits (367), Expect = 0.0 Identities = 584/651 (89%), Gaps = 4/651 (0%) Strand = Plus / Minus Query: 13 cataatatatcc-tggaacttttatattaagcca-gggtacaaatagattcatcgtggcg 70 |||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 658 cataatatatccatggaacttttatattaagccaagggtataaatagattcatcgtgggt 599 Query: 71 actcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttcc 129 ||||||||||||| ||||||||| | |||||||||| |||||||||||||| ||||| Sbjct: 598 tctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcg 539 Query: 130 atacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccataga 189 || | | |||||||||||||||| || || | |||||||||| ||||||||||||||||| Sbjct: 538 at-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 480 Query: 190 aatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattac 249 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 479 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 420 Query: 250 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgga 309 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggg 360 Query: 310 aaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtga 369 ||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| Sbjct: 359 aaacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcg 300 Query: 370 catctggttcaccggattcagggagaagattcagtttaggatagtcactagggcattttg 429 ||| |||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||| Sbjct: 299 catttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttg 240 Query: 430 gaccacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcga 489 | || |||||||||||||||| ||||||| |||||||||||| ||||||||||| |||| Sbjct: 239 ggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcga 180 Query: 490 aacggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctcca 549 ||||||| | ||||||||||||||| | ||||| |||||||||||| || | || | Sbjct: 179 aacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttcta 120 Query: 550 cctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatac 609 | ||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| Sbjct: 119 cttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatac 60 Query: 610 tcttgctgggtgccatggttggcttcttggctttaatttctccagaagaat 660 ||||| ||| |||||||||||||| ||||| |||||||||| || ||||| Sbjct: 59 tcttgttggttgccatggttggctggttggccttaatttctcaagtagaat 9
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 670 bits (338), Expect = 0.0 Identities = 529/590 (89%), Gaps = 2/590 (0%) Strand = Plus / Minus Query: 72 ctcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttcca 130 ||||||||||||| ||||||||| | |||||||||| |||||||||||||| ||||| | Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538 Query: 131 tacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaa 190 | | | |||||||||||||||| || || | |||||||||| |||||||||||||||||| Sbjct: 537 t-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479 Query: 191 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 250 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattaca 419 Query: 251 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 418 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggga 359 Query: 311 aacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 370 |||||||||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| | Sbjct: 358 aacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgc 299 Query: 371 atctggttcaccggattcagggagaagattcagtttaggatagtcactagggcattttgg 430 || |||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 298 atttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgg 239 Query: 431 accacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaa 490 || |||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||| Sbjct: 238 gccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaa 179 Query: 491 acggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 550 |||||| | ||||||||||||||| | ||||| |||||||||||| || | || || Sbjct: 178 acggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctac 119 Query: 551 ctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatact 610 ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 118 ttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatact 59 Query: 611 cttgctgggtgccatggttggcttcttggctttaatttctccagaagaat 660 |||| ||| |||||||||||||| ||||| |||||||||| || ||||| Sbjct: 58 cttgttggttgccatggttggctggttggccttaatttctcaagtagaat 9
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 646 bits (326), Expect = 0.0 Identities = 490/542 (90%), Gaps = 2/542 (0%) Strand = Plus / Minus Query: 52 aaatagattcatcgtggcgactcttattggaacaagggaaaaag-acaaatacataagta 110 ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||| || Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataacta 485 Query: 111 agatgatacattggcttccatacagctgatggtatcaagattattcaagacaaaatgaca 170 |||||||||||| ||||| || | |||||||||||||||| || || | ||||||||| Sbjct: 484 agatgatacatttgcttcgatgtgg-tgatggtatcaagattgttgaacagaaaatgaca 426 Query: 171 atacgaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactga 230 | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 425 aaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagactga 366 Query: 231 atgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaat 290 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 atgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaat 306 Query: 291 ttcatctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatcca 350 |||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 305 ttcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatcca 246 Query: 351 atggtgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttagga 410 || |||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||| Sbjct: 245 attgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttagga 186 Query: 411 tagtcactagggcattttggaccacttatgattttacaacgacaagcacctgcgcagact 470 ||||| ||||| ||| |||| || |||||||||||||||| ||||||| |||||||||| Sbjct: 185 tagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagact 126 Query: 471 ggacgggaaccacccgcgaaacggcaagtgttgtagcagtttctagctaacgtgtccttg 530 || ||||||||||| ||||||||||| | ||||||||||||||| | ||||| |||| Sbjct: 125 ggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttg 66 Query: 531 cagcaactttttccctccacctggacctgctccagaactaaacccagtatgagaacacaa 590 |||||||| || || || || ||||||||||||||||||||||||| ||||||||||||| Sbjct: 65 cagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaa 6 Query: 591 at 592 || Sbjct: 5 at 4
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 634 bits (320), Expect = e-179 Identities = 473/524 (90%) Strand = Plus / Minus Query: 137 tgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatg 196 |||||||||||||||| || || | |||||||||| |||||||||||||||||||||||| Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473 Query: 197 cacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 256 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413 Query: 257 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacatt 316 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353 Query: 317 gtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctgg 376 |||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| ||| ||| Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293 Query: 377 ttcaccggattcagggagaagattcagtttaggatagtcactagggcattttggaccact 436 ||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| || || Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 233 Query: 437 tatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggca 496 |||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| Sbjct: 232 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggca 173 Query: 497 agtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggac 556 | ||||||||||||||| | ||||| |||||||||||| || | || || ||||| Sbjct: 172 ggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggac 113 Query: 557 ctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgct 616 |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | Sbjct: 112 ctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgtt 53 Query: 617 gggtgccatggttggcttcttggctttaatttctccagaagaat 660 || |||||||||||||| ||||| |||||||||| || ||||| Sbjct: 52 ggttgccatggttggctggttggccttaatttctcaagtagaat 9
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 585 bits (295), Expect = e-164 Identities = 442/487 (90%), Gaps = 3/487 (0%) Strand = Plus / Minus Query: 25 tggaacttttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaa 83 ||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||| Sbjct: 486 tggaacttttatattaagccaagggcataaatagattcatcgtggtgactcttattggaa 427 Query: 84 caagggaaaaag-acaaatacataagtaagatgatacattggcttccatacagctgatgg 142 | ||||||||| | |||||||||| |||||||||||||| ||||| || | | |||||| Sbjct: 426 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatgg 368 Query: 143 tatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaag 202 |||||||||| || || | ||||||| || ||||||||||||||||||||||||| |||| Sbjct: 367 tatcaagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaag 308 Query: 203 aaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcaca 262 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 307 aaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcaca 248 Query: 263 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccat 322 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 247 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccag 188 Query: 323 gttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcacc 382 |||||||||||| ||| ||||||||||||| |||||||||| ||| ||| ||||||||| Sbjct: 187 gttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcacc 128 Query: 383 ggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatgat 442 ||||||||||||||||||||| ||||||||||| ||||| || |||| || |||||||| Sbjct: 127 ggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttatgat 68 Query: 443 tttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgtt 502 |||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | ||| Sbjct: 67 tttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgtt 8 Query: 503 gtagcag 509 ||||||| Sbjct: 7 gtagcag 1
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 565 bits (285), Expect = e-158 Identities = 311/316 (98%), Gaps = 3/316 (0%) Strand = Plus / Minus Query: 1 ttgtagtgtatn-cataatatatcc-tggaacttttatattaagcca-gggtacaaatag 57 ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 2346 ttgtagtgtatcacataatatatccatggaacttttatattaagccaagggtacaaatag 2287 Query: 58 attcatcgtggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgat 117 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2286 attcatcgtggcgactcttgttggaacaagggaaaaagacaaatacataagtaagatgat 2227 Query: 118 acattggcttccatacagctgatggtatcaagattattcaagacaaaatgacaatacgac 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2226 acattggcttccatacagctgatggtatcaagattattcaagacaaaatgacaatacgac 2167 Query: 178 cttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactg 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2166 cttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactg 2107 Query: 238 caccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatct 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2106 caccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatct 2047 Query: 298 cttggccacggaaaac 313 |||||||||||||||| Sbjct: 2046 cttggccacggaaaac 2031 Score = 549 bits (277), Expect = e-153 Identities = 280/281 (99%) Strand = Plus / Minus Query: 380 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 440 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 500 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597 Query: 560 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctggg 619 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1596 ctccagaactaaaaccagtatgagaacacaaatgaccacactcttaatactcttgctggg 1537 Query: 620 tgccatggttggcttcttggctttaatttctccagaagaat 660 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1536 tgccatggttggcttcttggctttaatttctccagaagaat 1496 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Minus Query: 313 cattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 372 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 373 ctggttcacc 382 |||||||||| Sbjct: 1877 ctggttcacc 1868
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 504 bits (254), Expect = e-139 Identities = 374/414 (90%) Strand = Plus / Minus Query: 212 ttaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgct 271 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 272 gcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcaca 331 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 332 gacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagg 391 ||| ||| ||||||||||||| |||||||||| ||| ||| |||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 392 gagaagattcagtttaggatagtcactagggcattttggaccacttatgattttacaacg 451 |||||||||||| ||||||||||| ||||| ||| |||| || |||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 452 acaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgtagcagtt 511 ||||||| |||||||||||| ||||||||||| |||||| |||| | |||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115 Query: 512 tctagctaacgtgtccttgcagcaactttttccctccacctggacctgctccagaactaa 571 ||| | ||||| |||||||||||| || || || || |||||||||||||||||||| Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55 Query: 572 acccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgccat 625 ||||| ||||||||||||||| ||||| ||||||||||||||| ||| |||||| Sbjct: 54 acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 1
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 280 bits (141), Expect = 6e-72 Identities = 168/177 (94%) Strand = Plus / Minus Query: 137 tgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatg 196 |||||||||||||||| || || | |||||||||| |||||||||||||||||||||||| Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 2171 Query: 197 cacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 256 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2170 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 2111 Query: 257 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 313 |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 2110 ggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054 Score = 278 bits (140), Expect = 2e-71 Identities = 239/272 (87%) Strand = Plus / Minus Query: 380 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 439 |||||||||||||||||||||||| ||||||||||| ||||| || |||| || ||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 440 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 499 ||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 500 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 559 ||||||||||||||| | ||||| |||||||||||| || || || || |||||||| Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618 Query: 560 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctggg 619 ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||| Sbjct: 1617 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 1558 Query: 620 tgccatggttggcttcttggctttaatttctc 651 |||||||||||||| ||||| |||||||||| Sbjct: 1557 tgccatggttggctggttggccttaatttctc 1526 Score = 83.8 bits (42), Expect = 7e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 313 cattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 372 ||||||||||||||||||| || ||| ||||||||||||| |||||||||| ||| |||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 373 ctggttcacc 382 ||||||||| Sbjct: 1903 ttggttcacc 1894
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 188 bits (95), Expect = 2e-44 Identities = 203/239 (84%) Strand = Plus / Minus Query: 175 gaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatga 234 ||||| ||||| ||||||||||||||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 235 ctgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 294 | ||||| | ||||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 295 tctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatccaatgg 354 ||||||||||| | | ||||||||||||||||||||| || ||| || ||||||| |||| Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 355 tgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttaggatag 413 ||||||||| ||||||||| ||||||||||||||| | ||||||| |||||||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatag 258 Score = 85.7 bits (43), Expect = 2e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 530 gcagcaactttttccctccacctggacctgctccagaactaaacccagtatgagaacaca 589 ||||||||| |||||||| |||||||||||| ||||||||||||| |||| ||| ||||| Sbjct: 144 gcagcaactctttccctctacctggacctgccccagaactaaacctagtacgaggacaca 85 Query: 590 aatgaccacactcttaatactcttgctgggtgccatggt 628 || ||||||| ||||| || ||| ||| ||||||||| Sbjct: 84 aagcaccacacacttaagacctttggtggttgccatggt 46
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 131 bits (66), Expect = 3e-27 Identities = 252/314 (80%) Strand = Plus / Minus Query: 321 atgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttca 380 ||||||||||| || ||| || |||||||||| |||||||||| || |||||| |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 381 ccggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatg 440 ||| |||||| |||||||| | ||||||| | ||||| || || ||| | | || | Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267 Query: 441 attttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtg 500 | |||||||| ||| | ||||||||||||||| || | | |||| || |||||||| Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207 Query: 501 ttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctgc 560 |||||||||||| | || |||| |||||||||||| || ||||| |||||||||||| Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgc 147 Query: 561 tccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggt 620 ||||||||||||||||| ||||| | |||||| || ||||||| |||| |||||| | Sbjct: 146 tccagaactaaacccagcatgaggaaacaaataacagcactcttgatacccttgcttgtg 87 Query: 621 gccatggttggctt 634 |||||||||||||| Sbjct: 86 gccatggttggctt 73 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Minus Query: 164 aatgacaatacgaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaac 223 |||| ||| |||||| ||||||||||||| | |||| ||| |||||||||||| | || Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499 Query: 224 agactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 283 ||| || |||| ||||| | |||||||||||| ||||||||||| |||||| | ||| Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439 Query: 284 gtcgaatttcatctcttggccacg 307 ||||| ||||||||||||||||| Sbjct: 438 gtcgatgttcatctcttggccacg 415
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 500 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 559 ||||||||||||||| || ||||||||||||||||| |||||||| || ||||| || Sbjct: 148 gttgtagcagtttcttgccgtggtgtccttgcagcaactctttccctctacttggacatg 89 Query: 560 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaa 606 ||||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 88 ctccagaactatccccaatacaagaacacaaatgaccacactcttaa 42
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 500 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 559 ||||||||||||||| || | | |||||||||||||| |||||||| || |||||||| Sbjct: 149 gttgtagcagtttcttgccatgatatccttgcagcaactctttccctctacttggacctg 90 Query: 560 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaa 606 ||||||||||| |||| || || ||||||||||| |||||||||| Sbjct: 89 ctccagaactatccccaatacaaggacacaaatgactacactcttaa 43
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 491 acggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 550 ||||||| ||||||||||||||| ||| ||| |||||||||||| ||||| || || Sbjct: 141 acggcaaaggttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctac 82 Query: 551 ctggacctgctccagaactaaacccagtatgag 583 || ||||| |||||||| || ||||||||||| Sbjct: 81 ttgcacctgttccagaaccaaccccagtatgag 49
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Minus Query: 500 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 559 ||||||||||||||| ||| ||| |||||||||||| || || || || || ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73 Query: 560 ctccagaactaaacccagtatgag 583 |||||||| || ||||||||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Minus Query: 500 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 559 ||||||||||||||| ||| ||| |||||||||||| || || || || || ||||| Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81 Query: 560 ctccagaactaaacccagtatgag 583 |||||||| || ||||||||||| Sbjct: 80 ttccagaaccaaccccagtatgag 57
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 acaagggaaaaagacaaataca 104 |||||||||||||||||||||| Sbjct: 6908 acaagggaaaaagacaaataca 6887
>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence Length = 211521 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 acaagggaaaaagacaaataca 104 |||||||||||||||||||||| Sbjct: 86367 acaagggaaaaagacaaataca 86346
>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159706 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 aagggaaaaagacaaatacata 106 |||||||||||||||||||||| Sbjct: 85293 aagggaaaaagacaaatacata 85272
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 acaagggaaaaagacaaataca 104 |||||||||||||||||||||| Sbjct: 41781 acaagggaaaaagacaaataca 41802
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence Length = 154450 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 195 tgcacaagaaggcatgattagg 216 |||||||||||||||||||||| Sbjct: 65514 tgcacaagaaggcatgattagg 65535
>gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome 18, complete sequence Length = 155706 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 acaagggaaaaagacaaatacataa 107 |||||||||||||| |||||||||| Sbjct: 114727 acaagggaaaaagaaaaatacataa 114751
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ggaaaacattgtccatgttgt 327 ||||||||||||||||||||| Sbjct: 33995 ggaaaacattgtccatgttgt 34015
>emb|AL669931.9| Mouse DNA sequence from clone RP23-31D18 on chromosome 11 Contains the Stc2 gene for stanniocalcin 2 and three CpG islands, complete sequence Length = 252980 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 625 tggttggcttcttggctttaatttc 649 |||||||||||||| |||||||||| Sbjct: 18345 tggttggcttcttgactttaatttc 18321
>gb|AC013437.8| Homo sapiens BAC clone RP11-190J23 from 2, complete sequence Length = 167424 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 catgttgtcacagacagaatt 340 ||||||||||||||||||||| Sbjct: 92156 catgttgtcacagacagaatt 92136
>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence Length = 179399 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 acaagggaaaaagacaaatacataa 107 |||||||||||||| |||||||||| Sbjct: 54540 acaagggaaaaagaaaaatacataa 54564
>gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, complete sequence Length = 235709 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 atagaaatcatgcacaagaaggca 208 ||||||||||| |||||||||||| Sbjct: 163342 atagaaatcatacacaagaaggca 163365
>gb|AY587193.1| Araneus ventricosus flagelliform silk protein-1 (Ff1) mRNA, partial cds Length = 1836 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctccacctggacctgctcca 564 |||||||||||||||||||| Sbjct: 410 ctccacctggacctgctcca 391
>emb|AL592406.4| Human DNA sequence from clone RP11-322F10 on chromosome 1 Contains the 3' end of a histone deacetylase 1 (HDAC1) pseudogene, the 3' end of the MARK1 gene for MAP/microtubule affinity-regulating kinase, a novel gene, a novel gene (FLJ14146) and a CpG island, complete sequence Length = 121601 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 atagtcactagggcattttg 429 |||||||||||||||||||| Sbjct: 119915 atagtcactagggcattttg 119934
>emb|AL359353.11| Human DNA sequence from clone RP11-124J24 on chromosome 1 Contains the 5' end of a novel gene (FLJ20605) and a CpG island, complete sequence Length = 33915 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 atagtcactagggcattttg 429 |||||||||||||||||||| Sbjct: 314 atagtcactagggcattttg 333
>emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for glucosyltransferase I and glucosyltransferase S Length = 10125 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tacagctgatggtatcaaga 150 |||||||||||||||||||| Sbjct: 2450 tacagctgatggtatcaaga 2469
>gb|AC157094.8| Mus musculus 6 BAC RP24-445L10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176428 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ttattcaagacaaaatgacaatac 174 |||||||| ||||||||||||||| Sbjct: 158722 ttattcaaaacaaaatgacaatac 158745
>emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 in linkage group 6, complete sequence Length = 171645 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 589 aaatgaccacactcttaatactct 612 ||||||| |||||||||||||||| Sbjct: 51305 aaatgacaacactcttaatactct 51282
>gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, complete sequence Length = 31443 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggaaaaagacaaatacataa 107 |||||||||||||||||||| Sbjct: 11773 ggaaaaagacaaatacataa 11792
>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17, complete sequence Length = 120315 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 aacagactgaatgactgcac 240 |||||||||||||||||||| Sbjct: 61583 aacagactgaatgactgcac 61602
>gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, complete sequence Length = 163612 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggaaaaagacaaatacataa 107 |||||||||||||||||||| Sbjct: 160156 ggaaaaagacaaatacataa 160175
>gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, complete sequence Length = 177985 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 tttggaccacttatgatttt 445 |||||||||||||||||||| Sbjct: 57050 tttggaccacttatgatttt 57031
>gb|AC158670.5| Mus musculus 6 BAC RP23-82N21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 227520 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 aatatatcctggaacttttatatt 39 |||||||||||||| ||||||||| Sbjct: 199729 aatatatcctggaaattttatatt 199706
>gb|AC158654.3| Mus musculus 6 BAC RP24-375H22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190192 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 aatatatcctggaacttttatatt 39 |||||||||||||| ||||||||| Sbjct: 94300 aatatatcctggaaattttatatt 94277
>gb|AF195898.1|AF195898 Synechococcus PCC7002 hypothetical protein (sll1144) gene, partial cds; enoyl-[acyl-carrier-protein] reductase (envM), global nitrogen regulator (ntcA), hypothetical protein (sll1424), and hypothetical protein (sll0832) genes, complete cds; and alanyl-tRNA synthetase (alaS) gene, partial cds Length = 4389 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 629 tggcttcttggctttaattt 648 |||||||||||||||||||| Sbjct: 1303 tggcttcttggctttaattt 1284
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds; glycyl-tRNA synthetase (Z195D10.2), ornithine carbamoyltransferase (Z195D10.3), putative gag protein (Z195D10.5), putative SET-domain transcriptional regulator (Z195D10.7), putative oxysterol-binding protein (Z195D10.8), putative polyprotein (Z195D10.9), putative oxysterol-binding protein (Z195D10.10), putative gag-pol polyprotein (Z195D10.11), putative phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12), hypothetical protein (Z195D10.15), putative gag-pol polyprotein (Z195D10.16), putative polyprotein (Z195D10.17), putative retrotransposon protein (Z195D10.18), and prpol (Z195D10.19) genes, complete cds; and putative teosinte branched2 (Z195D10.20) gene, partial cds Length = 141939 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 545 ctccacctggacctgctccagaac 568 ||||||||| |||||||||||||| Sbjct: 70388 ctccacctgaacctgctccagaac 70411
>gb|AC155288.3| Mus musculus 6 BAC RP24-176C17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168486 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 ttattcaagacaaaatgacaatac 174 |||||||| ||||||||||||||| Sbjct: 129916 ttattcaaaacaaaatgacaatac 129893
>gb|L10131.1|TRICDC28A Trichomonas vaginalis CDC2/28-related protein kinase gene sequence Length = 1461 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 14 ataatatatcctggaacttttatattaa 41 |||| |||||||| |||||||||||||| Sbjct: 1398 ataacatatcctgtaacttttatattaa 1371
>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence Length = 192355 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 acaaatacataagtaagatg 115 |||||||||||||||||||| Sbjct: 111212 acaaatacataagtaagatg 111193
>emb|AL714027.8| Mouse DNA sequence from clone RP23-96E23 on chromosome X, complete sequence Length = 175809 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gggtgccatggttggcttct 636 |||||||||||||||||||| Sbjct: 5492 gggtgccatggttggcttct 5473
>gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inner membrane protein (LBR) gene, 5' UTR, exons 1 and 2 Length = 5132 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggaaaaagacaaatacataa 107 |||||||||||||||||||| Sbjct: 4760 ggaaaaagacaaatacataa 4779
>gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferase I (gtfJ) gene, complete cds, and gtfK gene, 5' end Length = 4941 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tacagctgatggtatcaaga 150 |||||||||||||||||||| Sbjct: 2450 tacagctgatggtatcaaga 2469
>dbj|AB072340.1| Avena sativa mRNA for leaf thionin Asthi3, complete cds Length = 646 Score = 40.1 bits (20), Expect = 9.0 Identities = 79/96 (82%), Gaps = 2/96 (2%) Strand = Plus / Minus Query: 500 gttgtagcagtttctagctaacgt-gtccttgcagcaactttttccctccacctggacct 558 ||||||||||||||| || || || ||||||||| ||| | |||||||| || || |||| Sbjct: 167 gttgtagcagtttcttgc-aatgtcgtccttgcaacaagtgtttccctctacttgaacct 109 Query: 559 gctccagaactaaacccagtatgagaacacaaatga 594 |||| || |||| |||| |||||| ||||| |||| Sbjct: 108 gctctaggactatccccactatgaggacacacatga 73 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,069,973 Number of Sequences: 3902068 Number of extensions: 6069973 Number of successful extensions: 127572 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 127447 Number of HSP's gapped (non-prelim): 101 length of query: 661 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 638 effective length of database: 17,143,297,704 effective search space: 10937423935152 effective search space used: 10937423935152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
