>PPCE_BOVIN (Q9XTA2) Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving|
           enzyme) (PE)
          Length = 710

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 23/59 (38%), Positives = 42/59 (71%)
 Frame = -2

Query: 444 TMQHVLCTSIENSPQTNPIIGRIDRKSGHGAGRPTKKLIDEAADRYSFMSKMLGVTWTE 268
           T+QH++  S +   Q NP++  +D K+GHGAG+PT K+I+E +D ++F+++ L + W +
Sbjct: 655 TLQHLVGRSRK---QNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIDWIQ 710

>PPCE_MOUSE (Q9QUR6) Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving|
           enzyme) (PE)
          Length = 710

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 22/59 (37%), Positives = 43/59 (72%)
 Frame = -2

Query: 444 TMQHVLCTSIENSPQTNPIIGRIDRKSGHGAGRPTKKLIDEAADRYSFMSKMLGVTWTE 268
           T+Q+++  S +   Q+NP++  +D K+GHGAG+PT K+I+E +D ++F+++ L + W +
Sbjct: 655 TLQYIVGRSRK---QSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIEWIQ 710

>PPCE_HUMAN (P48147) Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving|
           enzyme) (PE)
          Length = 710

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 23/57 (40%), Positives = 42/57 (73%)
 Frame = -2

Query: 444 TMQHVLCTSIENSPQTNPIIGRIDRKSGHGAGRPTKKLIDEAADRYSFMSKMLGVTW 274
           T+Q+++  S +   Q+NP++  +D K+GHGAG+PT K+I+E +D ++F+++ L V W
Sbjct: 655 TLQYIVGRSRK---QSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNVDW 708

>PPCE_PIG (P23687) Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving|
           enzyme) (PE)
          Length = 710

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 22/57 (38%), Positives = 41/57 (71%)
 Frame = -2

Query: 444 TMQHVLCTSIENSPQTNPIIGRIDRKSGHGAGRPTKKLIDEAADRYSFMSKMLGVTW 274
           T+Q+++  S +   Q NP++  +D K+GHGAG+PT K+I+E +D ++F+++ L + W
Sbjct: 655 TLQYIVGRSRK---QNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIDW 708

>PPCE_FLAME (P27028) Prolyl endopeptidase precursor (EC 3.4.21.26)|
           (Proline-specific endopeptidase) (PSE) (Post-proline
           cleaving enzyme) (PE)
          Length = 705

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = -2

Query: 396 NPIIGRIDRKSGHGAGRPTKKLIDEAADRYSFMSKMLGV 280
           NPI+ RI+  +GHGAGR T++++ E AD  SF    +G+
Sbjct: 663 NPILIRIETNAGHGAGRSTEQVVAENADLLSFALYEMGI 701

>PPCF_FLAME (P27195) Prolyl endopeptidase precursor (EC 3.4.21.26)|
           (Proline-specific endopeptidase) (PSE) (Post-proline
           cleaving enzyme) (PE)
          Length = 705

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 17/39 (43%), Positives = 27/39 (69%)
 Frame = -2

Query: 396 NPIIGRIDRKSGHGAGRPTKKLIDEAADRYSFMSKMLGV 280
           NP++ RI+  +GHGAGR T++++ E AD  SF    +G+
Sbjct: 663 NPVLIRIETNAGHGAGRSTEQVVMENADLLSFALYEMGI 701

>PPCE_AERHY (Q06903) Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving|
           enzyme) (PE)
          Length = 689

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = -2

Query: 396 NPIIGRIDRKSGHGAGRPTKKLIDEAADRYSF 301
           +P + RI+  +GHGAG P  KLI+++AD Y+F
Sbjct: 644 HPQLIRIETNAGHGAGTPVAKLIEQSADIYAF 675

>LAMP1_MOUSE (P11438) Lysosome-associated membrane glycoprotein 1 precursor|
           (LAMP-1) (LGP-A) (LGP-120) (P2B) (CD107a antigen)
          Length = 406

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 203 PGRERLLSLQLLNSF*VQVSQLFEVDNTSNVCVVQAYPSLYILPY 69
           PG  R L L LL       S LFEV N    C++ ++ + ++  Y
Sbjct: 4   PGARRPLLLLLLAGLAHGASALFEVKNNGTTCIMASFSASFLTTY 48

>KR212_HUMAN (Q3LI59) Keratin-associated protein 21-2|
          Length = 83

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 348 CQLHALTCGQCGQLLGWSAGC 410
           C  +  +CG CG   GWS+GC
Sbjct: 3   CNYYRNSCGGCGYGSGWSSGC 23

>CT012_MACFA (Q9GKS9) Protein C20orf12 homolog|
          Length = 606

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 369 CGQCGQLLGWSAGCSQC 419
           CG CG +LG  AGCS C
Sbjct: 201 CGWCGAMLGIPAGCSVC 217

>CT012_HUMAN (Q9NVP4) Protein C20orf12|
          Length = 579

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 369 CGQCGQLLGWSAGCSQC 419
           CG CG +LG  AGCS C
Sbjct: 180 CGWCGAMLGIPAGCSVC 196

>GALR_LACCA (O84905) HTH-type transcriptional regulator galR (Galactose operon|
           repressor)
          Length = 331

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -1

Query: 265 VNSVHQEMLCAEHTQTVKGVILDGK 191
           + S+H E L AE TQ V+GVI  GK
Sbjct: 96  LQSLHLEQLAAETTQNVQGVIALGK 120

>TAZ1_SCHPO (P79005) Telomere length regulator taz1|
          Length = 663

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -3

Query: 125 NTSNVCVVQAYPSLYILPYVEGCVFLLRKILL 30
           N  NV V QAY  L+ +PY+E    LLR+ L+
Sbjct: 628 NWKNVTVGQAYCELHKIPYIEATPPLLREELV 659


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,830,148
Number of Sequences: 219361
Number of extensions: 1370686
Number of successful extensions: 3235
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3234
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)