ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags39a22 |
|---|---|
| Clone Library Name | barley_pub |
>SI1L2_MOUSE (Q80TE4) Signal-induced proliferation-associated 1-like protein 2| Length = 1722 Score = 32.3 bits (72), Expect = 1.7 Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 10/125 (8%) Frame = -3 Query: 749 EPCDVFGFHGVAVD----------KDTNSLSDHADAENGSMAPQADKAEATVSIMAADIY 600 +P ++ HG A D + +S H+ S +P A +++T S+ Sbjct: 1310 DPAKMYALHGYASAISSSAADGSMGDLSEVSSHSSGSQHSGSPSAHCSKSTGSL------ 1363 Query: 599 DGSAKADSSYGDAGLLFVPIAGEEEPYPTEDEPSPEEMAFLKSLGWKEDEVVPPLKQEEI 420 DSS G + G++ P + A +GWK+ E PP ++ E+ Sbjct: 1364 ------DSS---KGYIVTHGGGQQAPGAVTKPYHRQGAANKYVIGWKKSEGSPPPEEPEV 1414 Query: 419 ADCLR 405 +C R Sbjct: 1415 TECPR 1419
>DPOLZ_MOUSE (Q61493) DNA polymerase zeta catalytic subunit (EC 2.7.7.7)| (Seizure-related protein 4) Length = 3122 Score = 32.3 bits (72), Expect = 1.7 Identities = 25/90 (27%), Positives = 39/90 (43%) Frame = -3 Query: 767 ETKASLEPCDVFGFHGVAVDKDTNSLSDHADAENGSMAPQADKAEATVSIMAADIYDGSA 588 ET A+ + C + A +K+ SD A A +G+ + T + DGS Sbjct: 848 ETGATKDSCTHNDLYTGASEKENGLSSDSAKATHGTF----ENKPPTEHFIDCHFGDGSL 903 Query: 587 KADSSYGDAGLLFVPIAGEEEPYPTEDEPS 498 +A+ S+G G + A + Y TED S Sbjct: 904 EAEQSFGLYGNKYTLRAKRKVNYETEDSES 933
>SI1L2_RAT (Q5JCS6) Signal-induced proliferation-associated 1-like protein 2| (Serine-rich synapse-associated protein) Length = 1722 Score = 31.6 bits (70), Expect = 2.8 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Frame = -3 Query: 758 ASLEPCDVFGFHGVAVD----------KDTNSLSDHADAENGSMAPQADKAEATVSIMAA 609 A +P ++ HG A D + +S H+ + S +P +++T S+ ++ Sbjct: 1307 ADEDPAKMYTLHGYASAISSSAADGSMGDLSEVSSHSSGSHRSGSPSTHCSKSTGSLDSS 1366 Query: 608 DIYDGSAKADSSYGDAGLLFVPIAGEEEPYPTEDEPSPEEMAFLKSLGWKEDEVVPPLKQ 429 +Y + G++ P + A +GWK+ E PP ++ Sbjct: 1367 KVY---------------IVTHSGGQQVPGAVAKPYHRQGAANKYVIGWKKSEGSPPPEE 1411 Query: 428 EEIADCLR 405 E+ +C R Sbjct: 1412 PEVTECPR 1419
>SI1L2_HUMAN (Q9P2F8) Signal-induced proliferation-associated 1-like protein 2| Length = 1722 Score = 31.6 bits (70), Expect = 2.8 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 12/125 (9%) Frame = -3 Query: 749 EPCDVFGFHGVAVD-----------KDTNSLSDHADAENGSMAPQADKAEATVSIMAADI 603 EP ++ HG A D + +S H+ + S +P A ++++ S+ ++ + Sbjct: 1309 EPAKLYSVHGYASTISAGSAAEGSMGDLSEISSHSSGSHHSGSPSAHCSKSSGSLDSSKV 1368 Query: 602 YDGSAKADSSYGDAGLLFVPIAGEEEPYPTEDEPSPEEMAFLKS-LGWKEDEVVPPLKQE 426 Y S + G++ P + +P + A K +GWK+ E PP ++ Sbjct: 1369 YIVSHSS---------------GQQVP-GSMSKPYHRQGAVNKYVIGWKKSEGSPPPEEP 1412 Query: 425 EIADC 411 E+ +C Sbjct: 1413 EVTEC 1417
>HIS7_PASMU (P57920) Histidine biosynthesis bifunctional protein hisB| [Includes: Histidinol-phosphatase (EC 3.1.3.15); Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (IGPD)] Length = 363 Score = 30.8 bits (68), Expect = 4.9 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -3 Query: 524 PYPTEDEPSPEEMAFLKSLGWKEDEV-VPPLKQEEIADCLRHNVRLQQK 381 P D+P MA KS G + DEV + P K E+ DC + ++L +K Sbjct: 65 PQENFDKPHNAMMALFKSQGIEFDEVLICPHKPEDECDCRKPKIKLLKK 113
>LPAT1_ARATH (Q8GXU8) 1-acyl-sn-glycerol-3-phosphate acyltransferase 1,| chloroplast precursor (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 1) Length = 356 Score = 30.8 bits (68), Expect = 4.9 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 Query: 200 LSCLGRCFSLLKRGLRFFFIFPEG 129 + CL RC LLK+G FF FPEG Sbjct: 253 VDCLKRCMELLKKGASVFF-FPEG 275
>NRIP1_MOUSE (Q8CBD1) Nuclear receptor-interacting protein 1 (Nuclear factor| RIP140) (Receptor-interacting protein 140) Length = 1161 Score = 30.4 bits (67), Expect = 6.3 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 3/110 (2%) Frame = -3 Query: 761 KASLEPCDVFGFHGVAVDKDTNSLSDHADAENG---SMAPQADKAEATVSIMAADIYDGS 591 K EPCD F H +TN +H DA++ + P ++ A + + + + Sbjct: 755 KIKSEPCDDFQTH------NTNLPLNH-DAKSAPFLGVTPAIHRSTAALPVSEDFKSEPA 807 Query: 590 AKADSSYGDAGLLFVPIAGEEEPYPTEDEPSPEEMAFLKSLGWKEDEVVP 441 + D S+ GLL + +E YP +++ + L +L K +VP Sbjct: 808 SPQDFSFSKNGLLSRLLRQNQESYPADEQDKSHRNSELPTLESKNICMVP 857
>IAA9_ARATH (Q38827) Auxin-responsive protein IAA9 (Indoleacetic acid-induced| protein 9) Length = 338 Score = 30.0 bits (66), Expect = 8.3 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 5/68 (7%) Frame = -3 Query: 692 LSDHADAENGSMAPQADKAEATVSIMAADIYDGSAKADSSYGDAGL-LFVPIAGEEEPY- 519 LSD + + +++P A+ +AT+S+ A ++ G + S D L L P +E+P+ Sbjct: 39 LSDCSSVGSSTLSPLAEDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFF 98 Query: 518 ---PTEDE 504 P++DE Sbjct: 99 PLLPSKDE 106
>PTFAX_XANCP (P45597) Multiphosphoryl transfer protein (MTP) [Includes:| Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system enzyme I); Phosphocarrier protein HPr (Protein H); Fructose-specific phosphotransferase enzyme I Length = 838 Score = 30.0 bits (66), Expect = 8.3 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Frame = -3 Query: 767 ETKASLEPCDVFGFHGVAVDKDTNSLSDHA---DAENGSMAPQADKAEATVSIMAADIYD 597 E A+ DV H TN L+ + D +N +A +AD V M D Sbjct: 697 EVPAAAAQADVLARHADFFSIGTNDLTQYVLAIDRQNPELAAEADSLHPAVLRMIRSTID 756 Query: 596 GSAKADSSYGDAG 558 G+ K D G G Sbjct: 757 GARKHDRWVGVCG 769 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 116,817,951 Number of Sequences: 219361 Number of extensions: 2561013 Number of successful extensions: 7106 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 6822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7103 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 8184414220 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
