| Clone Name | rbags39a16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468448.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 529 bits (267), Expect = e-147 Identities = 451/511 (88%), Gaps = 1/511 (0%) Strand = Plus / Minus Query: 228 ccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagg 287 |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||| Sbjct: 910 ccttttgcttcttgggcatcctgtagccaccaacgacgcaggcatggtcacgctcgaagg 851 Query: 288 gctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaacttcag 347 |||||||||||||||||||||| ||||||||||| || ||| ||||||||||| || Sbjct: 850 gctccagggtcacctgctccgacggcttgaactgatccgccttcagcttctcaacctcgc 791 Query: 348 cagcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaaatga 407 ||| ||||| ||||| | | | | |||||||||||||||| |||||||||||||||| Sbjct: 790 tagcgaacacagcctcagctggcatggtggagtcgatacagttcgccttgattgaaatga 731 Query: 408 caaagtgaccaccatttttcaggaagtatgaagcattaagggccaagatcctagcctgat 467 |||| || |||||||| ||||||||||| || || || ||||| |||||||||||||||| Sbjct: 730 caaaatgcccaccattcttcaggaagtaggatgcgttgagggctaagatcctagcctgat 671 Query: 468 caggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggtactttg 527 | ||||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 670 ctggctgggcaacatcagagaagataacatcaaccatgccaaccaacatccggtaccttg 611 Query: 528 cagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggccatgttga 587 | ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | Sbjct: 610 ctgggtgcctagcatcctcaatgatggggatcacattagtcctctttttggccatgttaa 551 Query: 588 caagatccctgccactgcggtgcgagaactccacagcatacaccagcccagtcggtccaa 647 |||||||||| ||||| | |||||||||||| ||||| || |||| ||||||||||||| Sbjct: 550 caagatccctaccactcctgtgcgagaactcaacagcgtagaccaaaccagtcggtccaa 491 Query: 648 caatatcagacacatgggacacccgtcgttcctgaggcggcaccaagatacagcacacga 707 ||||||| |||||||| |||| | || ||||||||||| ||||| ||||| | ||||||| Sbjct: 490 caatatcggacacatgagaca-ctgttgttcctgaggcagcaccgagatataacacacga 432 Query: 708 gcaccaggagcaatccagatgttgtcgacac 738 | ||||||||||||||||||||||||||||| Sbjct: 431 gtaccaggagcaatccagatgttgtcgacac 401
>dbj|AK071291.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088O08, full insert sequence Length = 1077 Score = 529 bits (267), Expect = e-147 Identities = 451/511 (88%), Gaps = 1/511 (0%) Strand = Plus / Minus Query: 228 ccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagg 287 |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||| Sbjct: 888 ccttttgcttcttgggcatcctgtagccaccaacgacgcaggcatggtcacgctcgaagg 829 Query: 288 gctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaacttcag 347 |||||||||||||||||||||| ||||||||||| || ||| ||||||||||| || Sbjct: 828 gctccagggtcacctgctccgacggcttgaactgatccgccttcagcttctcaacctcgc 769 Query: 348 cagcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaaatga 407 ||| ||||| ||||| | | | | |||||||||||||||| |||||||||||||||| Sbjct: 768 tagcgaacacagcctcagctggcatggtggagtcgatacagttcgccttgattgaaatga 709 Query: 408 caaagtgaccaccatttttcaggaagtatgaagcattaagggccaagatcctagcctgat 467 |||| || |||||||| ||||||||||| || || || ||||| |||||||||||||||| Sbjct: 708 caaaatgcccaccattcttcaggaagtaggatgcgttgagggctaagatcctagcctgat 649 Query: 468 caggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggtactttg 527 | ||||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 648 ctggctgggcaacatcagagaagataacatcaaccatgccaaccaacatccggtaccttg 589 Query: 528 cagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggccatgttga 587 | ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | Sbjct: 588 ctgggtgcctagcatcctcaatgatggggatcacattagtcctctttttggccatgttaa 529 Query: 588 caagatccctgccactgcggtgcgagaactccacagcatacaccagcccagtcggtccaa 647 |||||||||| ||||| | |||||||||||| ||||| || |||| ||||||||||||| Sbjct: 528 caagatccctaccactcctgtgcgagaactcaacagcgtagaccaaaccagtcggtccaa 469 Query: 648 caatatcagacacatgggacacccgtcgttcctgaggcggcaccaagatacagcacacga 707 ||||||| |||||||| |||| | || ||||||||||| ||||| ||||| | ||||||| Sbjct: 468 caatatcggacacatgagaca-ctgttgttcctgaggcagcaccgagatataacacacga 410 Query: 708 gcaccaggagcaatccagatgttgtcgacac 738 | ||||||||||||||||||||||||||||| Sbjct: 409 gtaccaggagcaatccagatgttgtcgacac 379
>gb|AY103804.1| Zea mays PCO102583 mRNA sequence Length = 1283 Score = 468 bits (236), Expect = e-128 Identities = 444/512 (86%), Gaps = 1/512 (0%) Strand = Plus / Minus Query: 227 gccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaag 286 ||||||||||||||||||| |||||| ||||| || ||||| |||||||||||||| || Sbjct: 990 gccttctgcttcttgggcaccctgtacccacccacaacacatgcatggtcacgctcgtag 931 Query: 287 ggctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaacttca 346 ||||||| ||||||||||||| ||||||||||| || ||| |||||||| ||||| Sbjct: 930 ggctccaacgtcacctgctccgcgggcttgaactgatccgccttgagcttctccacttcc 871 Query: 347 gcagcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaaatg 406 || |||||||||||||| | || | || |||||||||| ||||| ||||||||||||||| Sbjct: 870 gctgcaaacacggcctcagcaggcagggtggagtcgatgcagttagccttgattgaaatg 811 Query: 407 acaaagtgaccaccatttttcaggaagtatgaagcattaagggccaagatcctagcctga 466 |||||||| ||||| || |||| |||||||||||||||||| || |||||||||||||| Sbjct: 810 acaaagtggccaccgttcttcaagaagtatgaagcattaagtgctaagatcctagcctgg 751 Query: 467 tcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggtacttt 526 || |||||||||||||| |||||||||||||||||||||||||||||||| |||||| || Sbjct: 750 tctggctgtgcaacatcagagaagataacatcaaccatgccaaccaacatccggtacctt 691 Query: 527 gcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggccatgttg 586 || || ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 690 gccggatgcctggcatcctcaataatggggatcacattggtcctcttctttgccatgttg 631 Query: 587 acaagatccctgccactgcggtgcgagaactccacagcatacaccagcccagtcggtcca 646 ||||| || || ||||| | ||| |||||||| ||||| || ||||| ||| ||| || Sbjct: 630 acaaggtctcttccactcctgtgagagaactcaacagcgtagaccagaccatccggccct 571 Query: 647 acaatatcagacacatgggacacccgtcgttcctgaggcggcaccaagatacagcacacg 706 ||||||||||||||||| || | | || || || || || |||||||||||||||||||| Sbjct: 570 acaatatcagacacatgagata-cagttgtgccagaagcagcaccaagatacagcacacg 512 Query: 707 agcaccaggagcaatccagatgttgtcgacac 738 | |||||||||||||||||||||||| |||| Sbjct: 511 ggtaccaggagcaatccagatgttgtcaacac 480
>gb|BT017129.1| Zea mays clone EL01N0365E12.c mRNA sequence Length = 711 Score = 414 bits (209), Expect = e-112 Identities = 380/437 (86%) Strand = Plus / Plus Query: 227 gccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaag 286 ||||||||||||||||||| |||||| ||||| || ||||| |||||||||||||| || Sbjct: 258 gccttctgcttcttgggcaccctgtacccacccacaacacatgcatggtcacgctcgtag 317 Query: 287 ggctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaacttca 346 ||||||| ||||||||||||| ||||||||||| || ||| || ||||| ||||| Sbjct: 318 ggctccaacgtcacctgctccgcgggcttgaactgatccgccttgagtttctccacttcc 377 Query: 347 gcagcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaaatg 406 ||||||||||||||||| | || | || |||||||||| ||||| ||||||||||||||| Sbjct: 378 gcagcaaacacggcctcagcaggcagggtggagtcgatgcagttagccttgattgaaatg 437 Query: 407 acaaagtgaccaccatttttcaggaagtatgaagcattaagggccaagatcctagcctga 466 |||||||| |||||||| |||| |||||||||||||||||| || |||||||||||||| Sbjct: 438 acaaagtggccaccattcttcaagaagtatgaagcattaagtgctaagatcctagcctgg 497 Query: 467 tcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggtacttt 526 || |||||||||||||| ||||||||||||||||||||||| |||||||| |||||| || Sbjct: 498 tctggctgtgcaacatcagagaagataacatcaaccatgcctaccaacatccggtacctt 557 Query: 527 gcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggccatgttg 586 || || ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 558 gccggatgcctggcatcctcaataatggggatcacattggtcctcttctttgccatgttg 617 Query: 587 acaagatccctgccactgcggtgcgagaactccacagcatacaccagcccagtcggtcca 646 ||||| | || ||||| | ||| |||||||| ||||| || ||||| ||| ||| || Sbjct: 618 acaagggctcttccactcctgtgagagaactcaacagcgtagaccagaccatccggccct 677 Query: 647 acaatatcagacacatg 663 ||||||||||||||||| Sbjct: 678 acaatatcagacacatg 694
>dbj|AK103477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130D23, full insert sequence Length = 1824 Score = 327 bits (165), Expect = 3e-86 Identities = 250/277 (90%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 768 cctgatctggctgggcaacatcagagaagataacatcaaccatgccaaccaacatccggt 709 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 || |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 708 accttgctgggtgcctagcatcctcaatgatggggatcacattagtcctctttttggcca 649 Query: 582 tgttgacaagatccctgccactgcggtgcgagaactccacagcatacaccagcccagtcg 641 |||| ||||||||||| ||||| | |||||||||||| ||||| || |||| ||||||| Sbjct: 648 tgttaacaagatccctaccactcctgtgcgagaactcaacagcgtagaccaaaccagtcg 589 Query: 642 gtccaacaatatcagacacatgggacacccgtcgttcctgaggcggcaccaagatacagc 701 ||||||||||||| |||||||| |||| | || ||||||||||| ||||| ||||| | | Sbjct: 588 gtccaacaatatcggacacatgagaca-ctgttgttcctgaggcagcaccgagatataac 530 Query: 702 acacgagcaccaggagcaatccagatgttgtcgacac 738 ||||||| ||||||||||||||||||||||||||||| Sbjct: 529 acacgagtaccaggagcaatccagatgttgtcgacac 493 Score = 210 bits (106), Expect = 5e-51 Identities = 205/238 (86%) Strand = Plus / Minus Query: 228 ccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagg 287 |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||| Sbjct: 1646 ccttttgcttcttgggcatcctgtagccaccaacgacgcaggcatggtcacgctcgaagg 1587 Query: 288 gctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaacttcag 347 |||||||||||||||||||||| ||||||||||| || ||| ||||||||||| || Sbjct: 1586 gctccagggtcacctgctccgacggcttgaactgatccgccttcagcttctcaacctcgc 1527 Query: 348 cagcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaaatga 407 ||| ||||| ||||| | | | | |||||||||||||||| |||||||||||||||| Sbjct: 1526 tagcgaacacagcctcagctggcatggtggagtcgatacagttcgccttgattgaaatga 1467 Query: 408 caaagtgaccaccatttttcaggaagtatgaagcattaagggccaagatcctagcctg 465 |||| || |||||||| ||||||||||| || || || ||||| |||||||||||||| Sbjct: 1466 caaaatgcccaccattcttcaggaagtaggatgcgttgagggctaagatcctagcctg 1409
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 220 bits (111), Expect = 5e-54 Identities = 150/163 (92%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 35291401 cctgatctggctgggcaacatcagagaagataacatcaaccatgccaaccaacatccggt 35291342 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 || |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 35291341 accttgctgggtgcctagcatcctcaatgatggggatcacattagtcctctttttggcca 35291282 Query: 582 tgttgacaagatccctgccactgcggtgcgagaactccacagc 624 |||| ||||||||||| ||||| | |||||||||||| ||||| Sbjct: 35291281 tgttaacaagatccctaccactcctgtgcgagaactcaacagc 35291239 Score = 141 bits (71), Expect = 4e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 228 ccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagg 287 |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||| Sbjct: 35293082 ccttttgcttcttgggcatcctgtagccaccaacgacgcaggcatggtcacgctcgaagg 35293023 Query: 288 gctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaac 342 |||||||||||||||||||||| ||||||||||| || ||| ||||||||||| Sbjct: 35293022 gctccagggtcacctgctccgacggcttgaactgatccgccttcagcttctcaac 35292968 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 393 ccttgattgaaatgacaaagtgaccaccatttttcaggaagtatgaagcattaagggcca 452 ||||||||||||||||||| || |||||||| ||||||||||| || || || ||||| | Sbjct: 35292807 ccttgattgaaatgacaaaatgcccaccattcttcaggaagtaggatgcgttgagggcta 35292748 Query: 453 agatcctagcctg 465 ||||||||||||| Sbjct: 35292747 agatcctagcctg 35292735 Score = 69.9 bits (35), Expect = 1e-08 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 640 cggtccaacaatatcagacacatgggacacccgtcgttcctgaggcggcaccaagataca 699 ||||||||||||||| |||||||| ||||| || ||||||||||| ||||| ||||| | Sbjct: 35291144 cggtccaacaatatcggacacatgagacact-gttgttcctgaggcagcaccgagatata 35291086 Query: 700 gcacacgagcaccaggagc 718 |||||||| ||||||||| Sbjct: 35291085 acacacgagtaccaggagc 35291067 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 718 caatccagatgttgtcgacac 738 ||||||||||||||||||||| Sbjct: 35290940 caatccagatgttgtcgacac 35290920
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 220 bits (111), Expect = 5e-54 Identities = 150/163 (92%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 41735 cctgatctggctgggcaacatcagagaagataacatcaaccatgccaaccaacatccggt 41676 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 || |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 41675 accttgctgggtgcctagcatcctcaatgatggggatcacattagtcctctttttggcca 41616 Query: 582 tgttgacaagatccctgccactgcggtgcgagaactccacagc 624 |||| ||||||||||| ||||| | |||||||||||| ||||| Sbjct: 41615 tgttaacaagatccctaccactcctgtgcgagaactcaacagc 41573 Score = 141 bits (71), Expect = 4e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 228 ccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagg 287 |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||| Sbjct: 43416 ccttttgcttcttgggcatcctgtagccaccaacgacgcaggcatggtcacgctcgaagg 43357 Query: 288 gctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaac 342 |||||||||||||||||||||| ||||||||||| || ||| ||||||||||| Sbjct: 43356 gctccagggtcacctgctccgacggcttgaactgatccgccttcagcttctcaac 43302 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 393 ccttgattgaaatgacaaagtgaccaccatttttcaggaagtatgaagcattaagggcca 452 ||||||||||||||||||| || |||||||| ||||||||||| || || || ||||| | Sbjct: 43141 ccttgattgaaatgacaaaatgcccaccattcttcaggaagtaggatgcgttgagggcta 43082 Query: 453 agatcctagcctg 465 ||||||||||||| Sbjct: 43081 agatcctagcctg 43069 Score = 69.9 bits (35), Expect = 1e-08 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 640 cggtccaacaatatcagacacatgggacacccgtcgttcctgaggcggcaccaagataca 699 ||||||||||||||| |||||||| ||||| || ||||||||||| ||||| ||||| | Sbjct: 41478 cggtccaacaatatcggacacatgagacact-gttgttcctgaggcagcaccgagatata 41420 Query: 700 gcacacgagcaccaggagc 718 |||||||| ||||||||| Sbjct: 41419 acacacgagtaccaggagc 41401 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 718 caatccagatgttgtcgacac 738 ||||||||||||||||||||| Sbjct: 41274 caatccagatgttgtcgacac 41254
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 220 bits (111), Expect = 5e-54 Identities = 150/163 (92%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 103451 cctgatctggctgggcaacatcagagaagataacatcaaccatgccaaccaacatccggt 103392 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 || |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 103391 accttgctgggtgcctagcatcctcaatgatggggatcacattagtcctctttttggcca 103332 Query: 582 tgttgacaagatccctgccactgcggtgcgagaactccacagc 624 |||| ||||||||||| ||||| | |||||||||||| ||||| Sbjct: 103331 tgttaacaagatccctaccactcctgtgcgagaactcaacagc 103289 Score = 141 bits (71), Expect = 4e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 228 ccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagg 287 |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||| Sbjct: 105132 ccttttgcttcttgggcatcctgtagccaccaacgacgcaggcatggtcacgctcgaagg 105073 Query: 288 gctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaac 342 |||||||||||||||||||||| ||||||||||| || ||| ||||||||||| Sbjct: 105072 gctccagggtcacctgctccgacggcttgaactgatccgccttcagcttctcaac 105018 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 393 ccttgattgaaatgacaaagtgaccaccatttttcaggaagtatgaagcattaagggcca 452 ||||||||||||||||||| || |||||||| ||||||||||| || || || ||||| | Sbjct: 104857 ccttgattgaaatgacaaaatgcccaccattcttcaggaagtaggatgcgttgagggcta 104798 Query: 453 agatcctagcctg 465 ||||||||||||| Sbjct: 104797 agatcctagcctg 104785 Score = 69.9 bits (35), Expect = 1e-08 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 640 cggtccaacaatatcagacacatgggacacccgtcgttcctgaggcggcaccaagataca 699 ||||||||||||||| |||||||| ||||| || ||||||||||| ||||| ||||| | Sbjct: 103194 cggtccaacaatatcggacacatgagacact-gttgttcctgaggcagcaccgagatata 103136 Query: 700 gcacacgagcaccaggagc 718 |||||||| ||||||||| Sbjct: 103135 acacacgagtaccaggagc 103117 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 718 caatccagatgttgtcgacac 738 ||||||||||||||||||||| Sbjct: 102990 caatccagatgttgtcgacac 102970
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 212 bits (107), Expect = 1e-51 Identities = 155/171 (90%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 123182 cctgatctggctgggcaacatcagagaagataacatcaaccatgccaaccaacatccggt 123123 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 || | || |||||||||||||| ||||||||||| || |||||||||||||| ||||||| Sbjct: 123122 acctcgccgggtgcctagcatcttcaatgatgggaattacattggtcctctttttggcca 123063 Query: 582 tgttgacaagatccctgccactgcggtgcgagaactccacagcatacacca 632 |||||||||||||||| ||||| | |||||||||||| |||||||| |||| Sbjct: 123062 tgttgacaagatccctaccactcctgtgcgagaactcaacagcatagacca 123012 Score = 135 bits (68), Expect = 2e-28 Identities = 119/136 (87%) Strand = Plus / Minus Query: 228 ccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagg 287 |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||| || | Sbjct: 124813 ccttttgcttcttgggcatcctgtaaccaccaacgacgcaggcatggtcacgctcgaaag 124754 Query: 288 gctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaacttcag 347 ||||||| ||||||||||| || ||||||||||| || ||| ||||||||||||||| Sbjct: 124753 gctccagcgtcacctgctcagagggcttgaactgatctgccttcagcttctcaacttcac 124694 Query: 348 cagcaaacacggcctc 363 ||||||||| ||||| Sbjct: 124693 tagcaaacacagcctc 124678 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 393 ccttgattgaaatgacaaagtgaccaccatttttcaggaagtatgaagcattaagggcca 452 ||||||||||||||||||| || |||||||| ||||||||||| || ||||| ||||| | Sbjct: 124535 ccttgattgaaatgacaaaatgtccaccattcttcaggaagtaggatgcattgagggcta 124476 Query: 453 agatcctagcctg 465 ||||||||||||| Sbjct: 124475 agatcctagcctg 124463 Score = 77.8 bits (39), Expect = 5e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 640 cggtccaacaatatcagacacatgggacacccgtcgttcctgaggcggcaccaagataca 699 |||||||||||||||||||||||| |||| | || ||||||||||| |||| ||||||| Sbjct: 122920 cggtccaacaatatcagacacatgagaca-cggttgttcctgaggcaccaccgagataca 122862 Query: 700 gcacacgagcaccaggagc 718 ||||||| | ||||||||| Sbjct: 122861 gcacacgggtaccaggagc 122843
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 212 bits (107), Expect = 1e-51 Identities = 155/171 (90%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 12025 cctgatctggctgggcaacatcagagaagataacatcaaccatgccaaccaacatccggt 11966 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 || | || |||||||||||||| ||||||||||| || |||||||||||||| ||||||| Sbjct: 11965 acctcgccgggtgcctagcatcttcaatgatgggaattacattggtcctctttttggcca 11906 Query: 582 tgttgacaagatccctgccactgcggtgcgagaactccacagcatacacca 632 |||||||||||||||| ||||| | |||||||||||| |||||||| |||| Sbjct: 11905 tgttgacaagatccctaccactcctgtgcgagaactcaacagcatagacca 11855 Score = 135 bits (68), Expect = 2e-28 Identities = 119/136 (87%) Strand = Plus / Minus Query: 228 ccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagg 287 |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||| || | Sbjct: 13656 ccttttgcttcttgggcatcctgtaaccaccaacgacgcaggcatggtcacgctcgaaag 13597 Query: 288 gctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaacttcag 347 ||||||| ||||||||||| || ||||||||||| || ||| ||||||||||||||| Sbjct: 13596 gctccagcgtcacctgctcagagggcttgaactgatctgccttcagcttctcaacttcac 13537 Query: 348 cagcaaacacggcctc 363 ||||||||| ||||| Sbjct: 13536 tagcaaacacagcctc 13521 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 393 ccttgattgaaatgacaaagtgaccaccatttttcaggaagtatgaagcattaagggcca 452 ||||||||||||||||||| || |||||||| ||||||||||| || ||||| ||||| | Sbjct: 13378 ccttgattgaaatgacaaaatgtccaccattcttcaggaagtaggatgcattgagggcta 13319 Query: 453 agatcctagcctg 465 ||||||||||||| Sbjct: 13318 agatcctagcctg 13306 Score = 77.8 bits (39), Expect = 5e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 640 cggtccaacaatatcagacacatgggacacccgtcgttcctgaggcggcaccaagataca 699 |||||||||||||||||||||||| |||| | || ||||||||||| |||| ||||||| Sbjct: 11763 cggtccaacaatatcagacacatgagaca-cggttgttcctgaggcaccaccgagataca 11705 Query: 700 gcacacgagcaccaggagc 718 ||||||| | ||||||||| Sbjct: 11704 gcacacgggtaccaggagc 11686
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 212 bits (107), Expect = 1e-51 Identities = 155/171 (90%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 4501558 cctgatctggctgggcaacatcagagaagataacatcaaccatgccaaccaacatccggt 4501499 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 || | || |||||||||||||| ||||||||||| || |||||||||||||| ||||||| Sbjct: 4501498 acctcgccgggtgcctagcatcttcaatgatgggaattacattggtcctctttttggcca 4501439 Query: 582 tgttgacaagatccctgccactgcggtgcgagaactccacagcatacacca 632 |||||||||||||||| ||||| | |||||||||||| |||||||| |||| Sbjct: 4501438 tgttgacaagatccctaccactcctgtgcgagaactcaacagcatagacca 4501388 Score = 135 bits (68), Expect = 2e-28 Identities = 119/136 (87%) Strand = Plus / Minus Query: 228 ccttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagg 287 |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||| || | Sbjct: 4503189 ccttttgcttcttgggcatcctgtaaccaccaacgacgcaggcatggtcacgctcgaaag 4503130 Query: 288 gctccagggtcacctgctccgaaggcttgaactgctcaagctttagcttctcaacttcag 347 ||||||| ||||||||||| || ||||||||||| || ||| ||||||||||||||| Sbjct: 4503129 gctccagcgtcacctgctcagagggcttgaactgatctgccttcagcttctcaacttcac 4503070 Query: 348 cagcaaacacggcctc 363 ||||||||| ||||| Sbjct: 4503069 tagcaaacacagcctc 4503054 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 393 ccttgattgaaatgacaaagtgaccaccatttttcaggaagtatgaagcattaagggcca 452 ||||||||||||||||||| || |||||||| ||||||||||| || ||||| ||||| | Sbjct: 4502911 ccttgattgaaatgacaaaatgtccaccattcttcaggaagtaggatgcattgagggcta 4502852 Query: 453 agatcctagcctg 465 ||||||||||||| Sbjct: 4502851 agatcctagcctg 4502839 Score = 77.8 bits (39), Expect = 5e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 640 cggtccaacaatatcagacacatgggacacccgtcgttcctgaggcggcaccaagataca 699 |||||||||||||||||||||||| |||| | || ||||||||||| |||| ||||||| Sbjct: 4501296 cggtccaacaatatcagacacatgagaca-cggttgttcctgaggcaccaccgagataca 4501238 Query: 700 gcacacgagcaccaggagc 718 ||||||| | ||||||||| Sbjct: 4501237 gcacacgggtaccaggagc 4501219
>ref|NM_124626.3| Arabidopsis thaliana FIB1 (FIBRILLARIN 1) AT5G52470 (FIB1) mRNA, complete cds Length = 1156 Score = 161 bits (81), Expect = 4e-36 Identities = 177/209 (84%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagtat 436 |||||||||||||||||||||||||| || |||||||| |||||| |||| ||||| || Sbjct: 826 gagtcgatacagttggccttgattgagataacaaagtgtccaccagttttgaggaaaaat 767 Query: 437 gaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataaca 496 || ||||| ||||||||||| || |||||||| ||||| |||||||| ||||| || ||| Sbjct: 766 gaggcattcagggccaagattcttgcctgatctggctgagcaacatcagagaatatgaca 707 Query: 497 tcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgggg 556 ||||||||||| || | ||| | |||||| || || || |||||||| |||||||| || Sbjct: 706 tcaaccatgcccacgagcattctgtacttagccggatgtctagcatcttcaatgattgga 647 Query: 557 atcacattggtcctcttcttggccatgtt 585 || || || || ||||||||||||||||| Sbjct: 646 ataacgttagttctcttcttggccatgtt 618 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 236 ttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctccagg 295 ||||| ||||| | ||| ||||| || ||||||||||||||||||||||| ||||| || Sbjct: 967 ttcttcggcatgcggtaaccaccaacaacacaggcatggtcacgctcaaacggctcgaga 908 Query: 296 gtcacctgctccgaaggcttgaactgctc 324 |||||||| || | ||||| |||||||| Sbjct: 907 gtcacctgttctgctggcttaaactgctc 879
>gb|AF187871.1| Arabidopsis thaliana fibrillarin homolog (Fbr1) mRNA, complete cds Length = 1167 Score = 161 bits (81), Expect = 4e-36 Identities = 177/209 (84%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagtat 436 |||||||||||||||||||||||||| || |||||||| |||||| |||| ||||| || Sbjct: 832 gagtcgatacagttggccttgattgagataacaaagtgtccaccagttttgaggaaaaat 773 Query: 437 gaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataaca 496 || ||||| ||||||||||| || |||||||| ||||| |||||||| ||||| || ||| Sbjct: 772 gaggcattcagggccaagattcttgcctgatctggctgagcaacatcagagaatatgaca 713 Query: 497 tcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgggg 556 ||||||||||| || | ||| | |||||| || || || |||||||| |||||||| || Sbjct: 712 tcaaccatgcccacgagcattctgtacttagccggatgtctagcatcttcaatgattgga 653 Query: 557 atcacattggtcctcttcttggccatgtt 585 || || || || ||||||||||||||||| Sbjct: 652 ataacgttagttctcttcttggccatgtt 624 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 236 ttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctccagg 295 ||||||||||| | ||| ||||| || ||||||||||||||||||||||| ||||| || Sbjct: 973 ttcttgggcatgcggtaaccaccaacaacacaggcatggtcacgctcaaacggctcgaga 914 Query: 296 gtcacctg 303 |||||||| Sbjct: 913 gtcacctg 906
>gb|AY139769.1| Arabidopsis thaliana AT5g52470/K24M7_22 mRNA, complete cds Length = 1176 Score = 161 bits (81), Expect = 4e-36 Identities = 177/209 (84%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagtat 436 |||||||||||||||||||||||||| || |||||||| |||||| |||| ||||| || Sbjct: 846 gagtcgatacagttggccttgattgagataacaaagtgtccaccagttttgaggaaaaat 787 Query: 437 gaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataaca 496 || ||||| ||||||||||| || |||||||| ||||| |||||||| ||||| || ||| Sbjct: 786 gaggcattcagggccaagattcttgcctgatctggctgagcaacatcagagaatatgaca 727 Query: 497 tcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgggg 556 ||||||||||| || | ||| | |||||| || || || |||||||| |||||||| || Sbjct: 726 tcaaccatgcccacgagcattctgtacttagccggatgtctagcatcttcaatgattgga 667 Query: 557 atcacattggtcctcttcttggccatgtt 585 || || || || ||||||||||||||||| Sbjct: 666 ataacgttagttctcttcttggccatgtt 638 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 236 ttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctccagg 295 ||||| ||||| | ||| ||||| || ||||||||||||||||||||||| ||||| || Sbjct: 987 ttcttcggcatgcggtaaccaccaacaacacaggcatggtcacgctcaaacggctcgaga 928 Query: 296 gtcacctgctccgaaggcttgaactgctc 324 |||||||| || | ||||| |||||||| Sbjct: 927 gtcacctgttctgctggcttaaactgctc 899
>gb|BT004541.1| Arabidopsis thaliana AT5g52470/K24M7_22 gene, complete cds Length = 927 Score = 161 bits (81), Expect = 4e-36 Identities = 177/209 (84%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagtat 436 |||||||||||||||||||||||||| || |||||||| |||||| |||| ||||| || Sbjct: 764 gagtcgatacagttggccttgattgagataacaaagtgtccaccagttttgaggaaaaat 705 Query: 437 gaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataaca 496 || ||||| ||||||||||| || |||||||| ||||| |||||||| ||||| || ||| Sbjct: 704 gaggcattcagggccaagattcttgcctgatctggctgagcaacatcagagaatatgaca 645 Query: 497 tcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgggg 556 ||||||||||| || | ||| | |||||| || || || |||||||| |||||||| || Sbjct: 644 tcaaccatgcccacgagcattctgtacttagccggatgtctagcatcttcaatgattgga 585 Query: 557 atcacattggtcctcttcttggccatgtt 585 || || || || ||||||||||||||||| Sbjct: 584 ataacgttagttctcttcttggccatgtt 556 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 236 ttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctccagg 295 ||||| ||||| | ||| ||||| || ||||||||||||||||||||||| ||||| || Sbjct: 905 ttcttcggcatgcggtaaccaccaacaacacaggcatggtcacgctcaaacggctcgaga 846 Query: 296 gtcacctgctccgaaggcttgaactgctc 324 |||||||| || | ||||| |||||||| Sbjct: 845 gtcacctgttctgctggcttaaactgctc 817
>gb|AF233443.1|AF233443 Arabidopsis thaliana fibrillarin 1 (FIB1) mRNA, complete cds Length = 1136 Score = 161 bits (81), Expect = 4e-36 Identities = 177/209 (84%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagtat 436 |||||||||||||||||||||||||| || |||||||| |||||| |||| ||||| || Sbjct: 818 gagtcgatacagttggccttgattgagataacaaagtgtccaccagttttgaggaaaaat 759 Query: 437 gaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataaca 496 || ||||| ||||||||||| || |||||||| ||||| |||||||| ||||| || ||| Sbjct: 758 gaggcattcagggccaagattcttgcctgatctggctgagcaacatcagagaatatgaca 699 Query: 497 tcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgggg 556 ||||||||||| || | ||| | |||||| || || || |||||||| |||||||| || Sbjct: 698 tcaaccatgcccacgagcattctgtacttagccggatgtctagcatcttcaatgattgga 639 Query: 557 atcacattggtcctcttcttggccatgtt 585 || || || || ||||||||||||||||| Sbjct: 638 ataacgttagttctcttcttggccatgtt 610 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 236 ttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctccagg 295 ||||| ||||| | ||| ||||| || ||||||||||||||||||||||| ||||| || Sbjct: 959 ttcttcggcatgcggtaaccaccaacaacacaggcatggtcacgctcaaacggctcgaga 900 Query: 296 gtcacctgctccgaaggcttgaactgctc 324 |||||||| || | ||||| |||||||| Sbjct: 899 gtcacctgttctgctggcttaaactgctc 871
>ref|NM_118695.2| Arabidopsis thaliana FIB2 (FIBRILLARIN 2) AT4G25630 (FIB2) mRNA, complete cds Length = 1287 Score = 157 bits (79), Expect = 6e-35 Identities = 178/211 (84%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||||||||||| ||||| ||||| || |||||||| || || || ||||||| Sbjct: 905 tggagtcgatacagtttgcctttattgagatcacaaagtgtcctcctgacttgaggaagt 846 Query: 435 atgaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataa 494 |||| ||||| | |||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 845 atgatgcattcaaagccaagatcctagcctgatctggctgagcaacatcagagaagataa 786 Query: 495 catcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgg 554 ||||||||||||| || | ||| | ||| || || ||||| ||||||||||| ||||| | Sbjct: 785 catcaaccatgcctacaagcattctgtatttagctgggtgtctagcatcctcgatgattg 726 Query: 555 ggatcacattggtcctcttcttggccatgtt 585 | || |||||||| |||||||| |||||||| Sbjct: 725 gaataacattggttctcttctttgccatgtt 695 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 234 gcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctcca 293 ||||||| ||||| | ||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct: 1046 gcttcttaggcatacggtagccaccaacgacacatgcatggtcacgctcaaatggctcaa 987 Query: 294 gggtcacctgctc 306 | ||||| ||||| Sbjct: 986 gcgtcacttgctc 974
>gb|AY142647.1| Arabidopsis thaliana fibrillarin 2 (AtFib2) (At4g25630) mRNA, complete cds Length = 994 Score = 157 bits (79), Expect = 6e-35 Identities = 178/211 (84%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||||||||||| ||||| ||||| || |||||||| || || || ||||||| Sbjct: 799 tggagtcgatacagtttgcctttattgagatcacaaagtgtcctcctgacttgaggaagt 740 Query: 435 atgaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataa 494 |||| ||||| | |||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 739 atgatgcattcaaagccaagatcctagcctgatctggctgagcaacatcagagaagataa 680 Query: 495 catcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgg 554 ||||||||||||| || | ||| | ||| || || ||||| ||||||||||| ||||| | Sbjct: 679 catcaaccatgcctacaagcattctgtatttagctgggtgtctagcatcctcgatgattg 620 Query: 555 ggatcacattggtcctcttcttggccatgtt 585 | || |||||||| |||||||| |||||||| Sbjct: 619 gaataacattggttctcttctttgccatgtt 589 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 234 gcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctcca 293 ||||||| ||||| | ||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct: 940 gcttcttaggcatacggtagccaccaacgacacatgcatggtcacgctcaaatggctcaa 881 Query: 294 gggtcacctgctc 306 | ||||| ||||| Sbjct: 880 gtgtcacttgctc 868
>gb|AY046027.1| Arabidopsis thaliana putative fibrillarin 2 protein AtFib2 (At4g25630) mRNA, complete cds Length = 1288 Score = 157 bits (79), Expect = 6e-35 Identities = 178/211 (84%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||||||||||| ||||| ||||| || |||||||| || || || ||||||| Sbjct: 905 tggagtcgatacagtttgcctttattgagatcacaaagtgtcctcctgacttgaggaagt 846 Query: 435 atgaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataa 494 |||| ||||| | |||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 845 atgatgcattcaaagccaagatcctagcctgatctggctgagcaacatcagagaagataa 786 Query: 495 catcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgg 554 ||||||||||||| || | ||| | ||| || || ||||| ||||||||||| ||||| | Sbjct: 785 catcaaccatgcctacaagcattctgtatttagctgggtgtctagcatcctcgatgattg 726 Query: 555 ggatcacattggtcctcttcttggccatgtt 585 | || |||||||| |||||||| |||||||| Sbjct: 725 gaataacattggttctcttctttgccatgtt 695 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 234 gcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctcca 293 ||||||| ||||| | ||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct: 1046 gcttcttaggcatacggtagccaccaacgacacatgcatggtcacgctcaaatggctcaa 987 Query: 294 gggtcacctgctc 306 | ||||| ||||| Sbjct: 986 gcgtcacttgctc 974
>gb|AY084608.1| Arabidopsis thaliana clone 11319 mRNA, complete sequence Length = 1252 Score = 157 bits (79), Expect = 6e-35 Identities = 178/211 (84%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||||||||||| ||||| ||||| || |||||||| || || || ||||||| Sbjct: 870 tggagtcgatacagtttgcctttattgagatcacaaagtgtcctcctgacttgaggaagt 811 Query: 435 atgaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataa 494 |||| ||||| | |||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 810 atgatgcattcaaagccaagatcctagcctgatctggctgagcaacatcagagaagataa 751 Query: 495 catcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgg 554 ||||||||||||| || | ||| | ||| || || ||||| ||||||||||| ||||| | Sbjct: 750 catcaaccatgcctacaagcattctgtatttagctgggtgtctagcatcctcgatgattg 691 Query: 555 ggatcacattggtcctcttcttggccatgtt 585 | || |||||||| |||||||| |||||||| Sbjct: 690 gaataacattggttctcttctttgccatgtt 660 Score = 73.8 bits (37), Expect = 7e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 234 gcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctcca 293 ||||||| ||||| | ||| ||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1011 gcttcttaggcatacggtagccaccaacgacacaggcatggtcacgctcaaatggctcaa 952 Query: 294 gggtcacctgctc 306 | ||||| ||||| Sbjct: 951 gcgtcacttgctc 939
>gb|AF233444.1|AF233444 Arabidopsis thaliana fibrillarin 2 (FIB2) mRNA, complete cds Length = 1268 Score = 157 bits (79), Expect = 6e-35 Identities = 178/211 (84%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||||||||||| ||||| ||||| || |||||||| || || || ||||||| Sbjct: 877 tggagtcgatacagtttgcctttattgagatcacaaagtgtcctcctgacttgaggaagt 818 Query: 435 atgaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataa 494 |||| ||||| | |||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 817 atgatgcattcaaagccaagatcctagcctgatctggctgagcaacatcagagaagataa 758 Query: 495 catcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgg 554 ||||||||||||| || | ||| | ||| || || ||||| ||||||||||| ||||| | Sbjct: 757 catcaaccatgcctacaagcattctgtatttagctgggtgtctagcatcctcgatgattg 698 Query: 555 ggatcacattggtcctcttcttggccatgtt 585 | || |||||||| |||||||| |||||||| Sbjct: 697 gaataacattggttctcttctttgccatgtt 667 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 234 gcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctcca 293 ||||||| ||||| | ||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct: 1018 gcttcttaggcatacggtagccaccaacgacacatgcatggtcacgctcaaatggctcaa 959 Query: 294 gggtcacctgctc 306 | ||||| ||||| Sbjct: 958 gcgtcacttgctc 946
>gb|AF263383.1|AF263383 Arabidopsis thaliana SKP1 interacting partner 7 (SKIP7) mRNA, complete cds Length = 472 Score = 133 bits (67), Expect = 9e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagtat 436 |||||||||||||||||||||||||| || |||||||| |||||| |||| ||||| || Sbjct: 152 gagtcgatacagttggccttgattgagataacaaagtgtccaccagttttgaggaaaaat 93 Query: 437 gaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagataaca 496 || ||||| ||||||||||| || |||||||| ||||| |||||||| ||||| || ||| Sbjct: 92 gaggcattcagggccaagattcttgcctgatctggctgagcaacatcagagaatatgaca 33 Query: 497 tcaaccatgcc 507 ||||||||||| Sbjct: 32 tcaaccatgcc 22 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 236 ttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctccagg 295 ||||| ||||| | ||| ||||| || ||||||||||||||||||||||| ||||| || Sbjct: 293 ttcttcggcatgcggtaaccaccaacaacacaggcatggtcacgctcaaacggctcgaga 234 Query: 296 gtcacctgctccgaaggcttgaactgctc 324 |||||||| || | ||||| |||||||| Sbjct: 233 gtcacctgttctgctggcttaaactgctc 205
>dbj|AB207972.1| Nicotiana tabacum NtFib1 mRNA for tobacco fibrillarin homolog, complete cds Length = 1155 Score = 127 bits (64), Expect = 6e-26 Identities = 229/284 (80%) Strand = Plus / Minus Query: 386 cagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagtatgaagcatta 445 ||||||||||||||||| || ||||||||||| ||| ||||| ||||||||| ||||| Sbjct: 848 cagttggccttgattgatataacaaagtgacctccagctttcaagaagtatgatgcattc 789 Query: 446 agggccaagatcctagcctgatcaggctgtgcaacatctgagaagataacatcaaccatg 505 || || || || || |||||||||||||| |||||||| || || || ||||| ||||| Sbjct: 788 agagctaaaattcttgcctgatcaggctgagcaacatcagaaaatatcacatcgaccatt 729 Query: 506 ccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatggggatcacattg 565 || || | ||| | ||| ||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 728 ccgacaagcattctgtattttgctgggtgtctagcatcctcaataatggggataacatta 669 Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 || | ||||| |||||||| || | ||||| ||||| | ||| || || || |||||| Sbjct: 668 gtacgtttcttagccatgttcaccaagtcccttccacttctgtgagaaaattcgacagca 609 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatgggacac 669 || |||| |||| || ||||||| |||||| ||||| ||||| Sbjct: 608 tataccaccccaccaggaccaacaagatcagaaacatgagacac 565 Score = 44.1 bits (22), Expect = 0.65 Identities = 52/62 (83%) Strand = Plus / Minus Query: 263 acacaggcatggtcacgctcaaagggctccagggtcacctgctccgaaggcttgaactgc 322 |||||||||||||| | |||||||| || ||||| ||||||||| ||| || |||||| Sbjct: 971 acacaggcatggtccctttcaaagggttcaagggtgacctgctccataggtttaaactgc 912 Query: 323 tc 324 || Sbjct: 911 tc 910
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 103 bits (52), Expect = 8e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| ||||||||||||||||||||||| || | ||| | || Sbjct: 157695 cctgatctggctgagcaacatcagagaagataacatcaaccatgcctacaagcattctgt 157636 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 | || || ||||| ||||||||||| ||||| || || |||||||| |||||||| |||| Sbjct: 157635 atttagctgggtgtctagcatcctcgatgattggaataacattggttctcttctttgcca 157576 Query: 582 tgtt 585 |||| Sbjct: 157575 tgtt 157572 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 234 gcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctcca 293 ||||||| ||||| | ||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct: 158421 gcttcttaggcatacggtagccaccaacgacacatgcatggtcacgctcaaatggctcaa 158362 Query: 294 gggtcacctgctc 306 | ||||| ||||| Sbjct: 158361 gcgtcacttgctc 158349 Score = 44.1 bits (22), Expect = 0.65 Identities = 34/38 (89%) Strand = Plus / Minus Query: 428 aggaagtatgaagcattaagggccaagatcctagcctg 465 ||||||||||| ||||| | ||||||||||||||||| Sbjct: 158143 aggaagtatgatgcattcaaagccaagatcctagcctg 158106
>emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, cosmid clone L73G19 (ESSA project) Length = 42446 Score = 103 bits (52), Expect = 8e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| ||||||||||||||||||||||| || | ||| | || Sbjct: 6188 cctgatctggctgagcaacatcagagaagataacatcaaccatgcctacaagcattctgt 6129 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 | || || ||||| ||||||||||| ||||| || || |||||||| |||||||| |||| Sbjct: 6128 atttagctgggtgtctagcatcctcgatgattggaataacattggttctcttctttgcca 6069 Query: 582 tgtt 585 |||| Sbjct: 6068 tgtt 6065 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 234 gcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctcca 293 ||||||| ||||| | ||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct: 6914 gcttcttaggcatacggtagccaccaacgacacatgcatggtcacgctcaaatggctcaa 6855 Query: 294 gggtcacctgctc 306 | ||||| ||||| Sbjct: 6854 gcgtcacttgctc 6842 Score = 44.1 bits (22), Expect = 0.65 Identities = 34/38 (89%) Strand = Plus / Minus Query: 428 aggaagtatgaagcattaagggccaagatcctagcctg 465 ||||||||||| ||||| | ||||||||||||||||| Sbjct: 6636 aggaagtatgatgcattcaaagccaagatcctagcctg 6599
>gb|AF267171.1|AF267171 Arabidopsis thaliana fibrillarin 2 (FIB2) gene, complete cds Length = 2265 Score = 103 bits (52), Expect = 8e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| ||||||||||||||||||||||| || | ||| | || Sbjct: 1295 cctgatctggctgagcaacatcagagaagataacatcaaccatgcctacaagcattctgt 1236 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 | || || ||||| ||||||||||| ||||| || || |||||||| |||||||| |||| Sbjct: 1235 atttagctgggtgtctagcatcctcgatgattggaataacattggttctcttctttgcca 1176 Query: 582 tgtt 585 |||| Sbjct: 1175 tgtt 1172 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 234 gcttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctcca 293 ||||||| ||||| | ||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct: 2021 gcttcttaggcatacggtagccaccaacgacacatgcatggtcacgctcaaatggctcaa 1962 Query: 294 gggtcacctgctc 306 | ||||| ||||| Sbjct: 1961 gcgtcacttgctc 1949 Score = 44.1 bits (22), Expect = 0.65 Identities = 34/38 (89%) Strand = Plus / Minus Query: 428 aggaagtatgaagcattaagggccaagatcctagcctg 465 ||||||||||| ||||| | ||||||||||||||||| Sbjct: 1743 aggaagtatgatgcattcaaagccaagatcctagcctg 1706
>gb|AC130809.25| Medicago truncatula clone mth2-15i12, complete sequence Length = 114664 Score = 85.7 bits (43), Expect = 2e-13 Identities = 106/127 (83%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||||||||| |||||||| || || || ||||| ||||||||||||||||| | || Sbjct: 67211 cctgatcaggctgagcaacatcagaaaatatcacatctaccatgccaaccaacattctgt 67152 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 |||| || ||||| |||||||| ||||| || || || ||||| || | |||||| |||| Sbjct: 67151 acttcgcggggtgtctagcatcttcaataatcggtataacattagtacgcttcttagcca 67092 Query: 582 tgttgac 588 | ||||| Sbjct: 67091 tattgac 67085
>gb|AC151823.11| Medicago truncatula clone mth2-45h2, complete sequence Length = 125855 Score = 85.7 bits (43), Expect = 2e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||||||||| |||||||| || || || ||||| ||||||||||||||||| | || Sbjct: 74869 cctgatcaggctgagcaacatcagaaaatatcacatctaccatgccaaccaacattctgt 74928 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 |||| || ||||| |||||||| ||||| || || || ||||| || | |||||| |||| Sbjct: 74929 acttcgcggggtgtctagcatcttcaataatcggtataacattagtacgcttcttagcca 74988 Query: 582 tgttgac 588 | ||||| Sbjct: 74989 tattgac 74995
>gb|AF265547.1|AF265547 Arabidopsis thaliana fibrillarin 1 (FIB1) gene, complete cds Length = 2409 Score = 79.8 bits (40), Expect = 1e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| ||||| || |||||||||||||| || | ||| | || Sbjct: 1252 cctgatctggctgagcaacatcagagaatatgacatcaaccatgcccacgagcattctgt 1193 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 |||| || || || |||||||| |||||||| || || || || || ||||||||||||| Sbjct: 1192 acttagccggatgtctagcatcttcaatgattggaataacgttagttctcttcttggcca 1133 Query: 582 tgtt 585 |||| Sbjct: 1132 tgtt 1129 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 236 ttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctccagg 295 ||||| ||||| | ||| ||||| || ||||||||||||||||||||||| ||||| || Sbjct: 2247 ttcttcggcatgcggtaaccaccaacaacacaggcatggtcacgctcaaacggctcgaga 2188 Query: 296 gtcacctgctccgaaggcttgaactgctc 324 |||||||| || | ||||| |||||||| Sbjct: 2187 gtcacctgttctgctggcttaaactgctc 2159 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 393 ccttgattgaaatgacaaagtgaccaccatttttcaggaagtatgaagcattaagggcca 452 |||||||||| || |||||||| |||||| |||| ||||| |||| ||||| ||||||| Sbjct: 1992 ccttgattgagataacaaagtgtccaccagttttgaggaaaaatgaggcattcagggcca 1933 Query: 453 agat 456 |||| Sbjct: 1932 agat 1929
>dbj|AB019226.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24M7 Length = 73999 Score = 79.8 bits (40), Expect = 1e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 462 cctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggt 521 ||||||| ||||| |||||||| ||||| || |||||||||||||| || | ||| | || Sbjct: 67213 cctgatctggctgagcaacatcagagaatatgacatcaaccatgcccacgagcattctgt 67154 Query: 522 actttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcca 581 |||| || || || |||||||| |||||||| || || || || || ||||||||||||| Sbjct: 67153 acttagccggatgtctagcatcttcaatgattggaataacgttagttctcttcttggcca 67094 Query: 582 tgtt 585 |||| Sbjct: 67093 tgtt 67090 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 236 ttcttgggcatcctgtatccaccgacgacacaggcatggtcacgctcaaagggctccagg 295 ||||| ||||| | ||| ||||| || ||||||||||||||||||||||| ||||| || Sbjct: 68208 ttcttcggcatgcggtaaccaccaacaacacaggcatggtcacgctcaaacggctcgaga 68149 Query: 296 gtcacctgctccgaaggcttgaactgctc 324 |||||||| || | ||||| |||||||| Sbjct: 68148 gtcacctgttctgctggcttaaactgctc 68120 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 393 ccttgattgaaatgacaaagtgaccaccatttttcaggaagtatgaagcattaagggcca 452 |||||||||| || |||||||| |||||| |||| ||||| |||| ||||| ||||||| Sbjct: 67953 ccttgattgagataacaaagtgtccaccagttttgaggaaaaatgaggcattcagggcca 67894 Query: 453 agat 456 |||| Sbjct: 67893 agat 67890
>dbj|AK140117.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230304L01 product:hypothetical Fibrillarin containing protein, full insert sequence Length = 1209 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 349 agcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaaatgac 408 ||||||||||||||||| || | |||||||||| |||||||||||||| |||||||| Sbjct: 978 agcaaacacggcctcggcagacgctgtggagtcgatgcagttggccttgatggaaatgac 919 Query: 409 aaagtg 414 |||||| Sbjct: 918 aaagtg 913
>ref|NM_001004147.1| Mus musculus expressed sequence AI595406 (AI595406), mRNA Length = 1213 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 344 tcagcagcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaa 403 |||| ||||||||||||||||| || | |||||||||| |||||||||||||| ||| Sbjct: 967 tcagaagcaaacacggcctcggcagacgctgtggagtcgatgcagttggccttgatggaa 908 Query: 404 atgacaaagtg 414 |||| |||||| Sbjct: 907 atgagaaagtg 897
>gb|BC052068.1| Mus musculus expressed sequence AI595406, mRNA (cDNA clone MGC:62475 IMAGE:5710336), complete cds Length = 1213 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 344 tcagcagcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaa 403 |||| ||||||||||||||||| || | |||||||||| |||||||||||||| ||| Sbjct: 967 tcagaagcaaacacggcctcggcagacgctgtggagtcgatgcagttggccttgatggaa 908 Query: 404 atgacaaagtg 414 |||| |||||| Sbjct: 907 atgagaaagtg 897
>ref|XM_501884.1| Yarrowia lipolytica CLIB122, YALI0C15873g predicted mRNA Length = 966 Score = 61.9 bits (31), Expect = 3e-06 Identities = 100/123 (81%) Strand = Plus / Minus Query: 461 gcctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcgg 520 |||||||||||||| |||||||| | ||||| | |||| ||||| || || | ||| ||| Sbjct: 737 gcctgatcaggctgggcaacatcggcgaagacagcatcgaccataccgacaagcattcgg 678 Query: 521 tactttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcc 580 ||||| ||||| | ||||||||||||||||||||| || || | | |||||||||| Sbjct: 677 tacttctgggggtgtcgagcatcctcaatgatggggatgacgttaggtcgcttcttggcc 618 Query: 581 atg 583 ||| Sbjct: 617 atg 615 Score = 50.1 bits (25), Expect = 0.011 Identities = 25/25 (100%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgat 399 ||||||||||||||||||||||||| Sbjct: 823 tggagtcgatacagttggccttgat 799
>emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chromosome 11 Contains the Pank3 gene for pantothenate kinase 3, a pseudogene similar to part of ribosomal protein L7a (Rpl7a), a pseudogene similar to part of fibrillarin (Fbl), the Rars gene for arginyl-tRNA synthetase, the 3' end of the gene for a novel protein similar to human KIBRA and two CpG islands, complete sequence Length = 181103 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 344 tcagcagcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaa 403 |||| ||||||||||||||||| || | |||||||||| |||||||||||||| ||| Sbjct: 42809 tcagaagcaaacacggcctcggcagacgctgtggagtcgatgcagttggccttgatggaa 42868 Query: 404 atgacaaagtg 414 |||| |||||| Sbjct: 42869 atgagaaagtg 42879
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 61.9 bits (31), Expect = 3e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 461 gcctgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcgg 520 |||||||||||||| |||||||| | ||||| | |||| ||||| || || | ||| ||| Sbjct: 2255653 gcctgatcaggctgggcaacatcggcgaagacagcatcgaccataccgacaagcattcgg 2255712 Query: 521 tactttgcagggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggcc 580 ||||| ||||| | ||||||||||||||||||||| || || | | |||||||||| Sbjct: 2255713 tacttctgggggtgtcgagcatcctcaatgatggggatgacgttaggtcgcttcttggcc 2255772 Query: 581 atg 583 ||| Sbjct: 2255773 atg 2255775 Score = 50.1 bits (25), Expect = 0.011 Identities = 25/25 (100%) Strand = Plus / Plus Query: 375 tggagtcgatacagttggccttgat 399 ||||||||||||||||||||||||| Sbjct: 2255567 tggagtcgatacagttggccttgat 2255591
>gb|AY648785.1| Danio rerio fibrillarin mRNA, complete cds Length = 1449 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaa 411 ||||||| |||||||| |||||||||||||||||||| Sbjct: 908 tggagtcaatacagttcgccttgattgaaatgacaaa 872 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 611 gagaactccacagcatacaccagcccagtcggtccaacaatatcagacacatggga 666 |||||||| ||||||||||||| ||| |||||||||||| ||||| |||||||| Sbjct: 672 gagaactcaacagcatacaccaacccttccggtccaacaatgtcagaaacatggga 617
>gb|BC051777.1| Danio rerio fibrillarin, mRNA (cDNA clone MGC:56145 IMAGE:5412217), complete cds Length = 1538 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 611 gagaactccacagcatacaccagcccagtcggtccaacaatatcagacacatggga 666 |||||||| ||||||||||||| ||| |||||||||||| ||||| |||||||| Sbjct: 658 gagaactcaacagcatacaccaacccttccggtccaacaatgtcagaaacatggga 603 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaa 411 ||||||| |||||||| |||||||||||||| ||||| Sbjct: 894 tggagtcaatacagttcgccttgattgaaataacaaa 858
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgac 408 ||||||||||||||||||||||| |||||||| Sbjct: 35946 gagtcgatacagttggccttgatggaaatgac 35915
>ref|XM_754858.1| Ustilago maydis 521 hypothetical protein (UM03804.1) partial mRNA Length = 909 Score = 56.0 bits (28), Expect = 2e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 504 tgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatggggatcacat 563 ||||||| | |||||| ||||| |||||| | ||| ||||||| ||||||||| || | Sbjct: 745 tgccaacgagcatgcgatacttgtgagggtgtcgagcgtcctcaacgatggggatgacgt 686 Query: 564 tggtcctcttcttggccatgttga 587 |||| | ||||||||||||||||| Sbjct: 685 tggtacgcttcttggccatgttga 662 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 acttcagcagcaaacacggcctcgg 365 ||||| ||||||||||||||||||| Sbjct: 843 acttcggcagcaaacacggcctcgg 819
>ref|XM_567779.1| Cryptococcus neoformans var. neoformans JEC21 methyltransferase (CNK00110) partial mRNA Length = 1191 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgac 408 ||||||||||||||||||||||| |||||||| Sbjct: 866 gagtcgatacagttggccttgatggaaatgac 835
>gb|BC065610.1| Danio rerio fibrillarin, mRNA (cDNA clone MGC:77130 IMAGE:6961008), complete cds Length = 1450 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 611 gagaactccacagcatacaccagcccagtcggtccaacaatatcagacacatggga 666 |||||||| ||||||||||||| ||| |||||||||||| ||||| |||||||| Sbjct: 642 gagaactcaacagcatacaccaacccttccggtccaacaatgtcagaaacatggga 587 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaa 411 ||||||| |||||||| |||||||||||||| ||||| Sbjct: 878 tggagtcaatacagttcgccttgattgaaataacaaa 842
>ref|XM_701811.1| PREDICTED: Danio rerio similar to Fibrillarin, transcript variant 3 (LOC572759), mRNA Length = 1141 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 611 gagaactccacagcatacaccagcccagtcggtccaacaatatcagacacatggga 666 |||||||| ||||||||||||| ||| |||||||||||| ||||| |||||||| Sbjct: 710 gagaactcaacagcatacaccaacccttccggtccaacaatgtcagaaacatggga 655 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaa 411 ||||||| ||||| || |||||||||||||| ||||| Sbjct: 946 tggagtcaatacaattcgccttgattgaaataacaaa 910
>ref|XM_701810.1| PREDICTED: Danio rerio similar to Fibrillarin, transcript variant 2 (LOC572759), mRNA Length = 1454 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 611 gagaactccacagcatacaccagcccagtcggtccaacaatatcagacacatggga 666 |||||||| ||||||||||||| ||| |||||||||||| ||||| |||||||| Sbjct: 565 gagaactcaacagcatacaccaacccttccggtccaacaatgtcagaaacatggga 510 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaa 411 ||||||| ||||| || |||||||||||||| ||||| Sbjct: 801 tggagtcaatacaattcgccttgattgaaataacaaa 765
>ref|XM_678091.1| PREDICTED: Danio rerio similar to Fibrillarin, transcript variant 1 (LOC572759), mRNA Length = 1599 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 611 gagaactccacagcatacaccagcccagtcggtccaacaatatcagacacatggga 666 |||||||| ||||||||||||| ||| |||||||||||| ||||| |||||||| Sbjct: 710 gagaactcaacagcatacaccaacccttccggtccaacaatgtcagaaacatggga 655 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaa 411 ||||||| ||||| || |||||||||||||| ||||| Sbjct: 946 tggagtcaatacaattcgccttgattgaaataacaaa 910
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 375 tggagtcgatacagttggccttgattgaaatgacaa 410 ||||||||||||||||||||||||| || ||||||| Sbjct: 1030403 tggagtcgatacagttggccttgatggagatgacaa 1030438 Score = 44.1 bits (22), Expect = 0.65 Identities = 46/54 (85%) Strand = Plus / Plus Query: 530 gggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggccatg 583 ||||| ||||| ||||||||||| ||||| || || | ||||||||||||||| Sbjct: 1030558 gggtgtctagcgtcctcaatgattgggatgacgttaggtctcttcttggccatg 1030611
>ref|NM_210425.1| Eremothecium gossypii AER214Cp (AER214C), mRNA Length = 981 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaa 410 ||||||||||||||||||||||||| || ||||||| Sbjct: 838 tggagtcgatacagttggccttgatggagatgacaa 803 Score = 44.1 bits (22), Expect = 0.65 Identities = 46/54 (85%) Strand = Plus / Minus Query: 530 gggtgcctagcatcctcaatgatggggatcacattggtcctcttcttggccatg 583 ||||| ||||| ||||||||||| ||||| || || | ||||||||||||||| Sbjct: 683 gggtgtctagcgtcctcaatgattgggatgacgttaggtctcttcttggccatg 630
>gb|BC099198.1| Rattus norvegicus fibrillarin, mRNA (cDNA clone MGC:116371 IMAGE:7383920), complete cds Length = 1208 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 563 ttggtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccaca 622 ||||||||||||||||||| ||||| || || | |||| |||||| |||||||| || Sbjct: 739 ttggtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaact 680 Query: 623 gcatacaccagcccagtcggtccaacaatatcagacacatggga 666 || || ||||| ||| ||| |||||||| |||||||| ||||| Sbjct: 679 gcgtagaccagaccatccgggccaacaatgtcagacacgtggga 636 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 927 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 879
>ref|NM_001025643.1| Rattus norvegicus fibrillarin (Fbl), mRNA Length = 1208 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 563 ttggtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccaca 622 ||||||||||||||||||| ||||| || || | |||| |||||| |||||||| || Sbjct: 739 ttggtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaact 680 Query: 623 gcatacaccagcccagtcggtccaacaatatcagacacatggga 666 || || ||||| ||| ||| |||||||| |||||||| ||||| Sbjct: 679 gcgtagaccagaccatccgggccaacaatgtcagacacgtggga 636 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 927 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 879
>ref|NM_213002.1| Danio rerio fibrillarin (fbl), mRNA Length = 1538 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 611 gagaactccacagcatacaccagcccagtcggtccaacaatatcagacacatggga 666 |||||||| ||||||||||||| ||| |||||||||||| ||||| |||||||| Sbjct: 658 gagaactcaacagcatacaccaacccttccggtccaacaatgtcagaaacatggga 603 Score = 50.1 bits (25), Expect = 0.011 Identities = 34/37 (91%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaa 411 ||||||| |||||||| |||||||||||||| ||||| Sbjct: 894 tggagtcaatacagttcgccttgattgaaataacaaa 858
>gb|L26252.1|LEIFIBRIL Leishmania major fibrillarin homologue, complete cds Length = 1172 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 605 cggtgcgagaactccacagcatacacca 632 |||||||||||||||||||||||||||| Sbjct: 720 cggtgcgagaactccacagcatacacca 693
>emb|Z74062.1|SCYDL014W S.cerevisiae chromosome IV reading frame ORF YDL014w Length = 2132 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 464 tgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggtac 523 ||||||||||| |||||||||| ||||| | |||||||| |||| |||||| | ||| Sbjct: 1175 tgatcaggctgggcaacatctgcgaagacacagtcaaccataccaatcaacattctgtat 1116 Query: 524 tttgcagggtgcctagcatcctcaatgatggggat 558 ||| ||||| |||||||| |||||||| ||||| Sbjct: 1115 ttttgtgggtgtctagcatcttcaatgattgggat 1081
>emb|Z74061.1|SCYDL013W S.cerevisiae chromosome IV reading frame ORF YDL013w Length = 3225 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 464 tgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggtac 523 ||||||||||| |||||||||| ||||| | |||||||| |||| |||||| | ||| Sbjct: 227 tgatcaggctgggcaacatctgcgaagacacagtcaaccataccaatcaacattctgtat 168 Query: 524 tttgcagggtgcctagcatcctcaatgatggggat 558 ||| ||||| |||||||| |||||||| ||||| Sbjct: 167 ttttgtgggtgtctagcatcttcaatgattgggat 133
>emb|Z48432.1|SCCHRIV42 S. cerevisiae chromosome IV left arm (EU) DNA segment (41372 bp) Length = 41372 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 464 tgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggtac 523 ||||||||||| |||||||||| ||||| | |||||||| |||| |||||| | ||| Sbjct: 23943 tgatcaggctgggcaacatctgcgaagacacagtcaaccataccaatcaacattctgtat 23884 Query: 524 tttgcagggtgcctagcatcctcaatgatggggat 558 ||| ||||| |||||||| |||||||| ||||| Sbjct: 23883 ttttgtgggtgtctagcatcttcaatgattgggat 23849
>emb|X51676.1|SCNOP1SEQ S.cerevisiae DNA for 38 kd nukleolar protein NOP1 Length = 1455 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 464 tgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggtac 523 ||||||||||| |||||||||| ||||| | |||||||| |||| |||||| | ||| Sbjct: 1019 tgatcaggctgggcaacatctgcgaagacacagtcaaccataccaatcaacattctgtat 960 Query: 524 tttgcagggtgcctagcatcctcaatgatggggat 558 ||| ||||| |||||||| |||||||| ||||| Sbjct: 959 ttttgtgggtgtctagcatcttcaatgattgggat 925
>gb|J05230.1|YSCNOP1 S.cerevisiae fibrillarin (NOP1) gene, complete cds Length = 2567 Score = 54.0 bits (27), Expect = 7e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 464 tgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggtac 523 ||||||||||| |||||||||| ||||| | |||||||| |||| |||||| | ||| Sbjct: 1394 tgatcaggctgggcaacatctgcgaagacacagtcaaccataccaatcaacattctgtat 1335 Query: 524 tttgcagggtgcctagcatcctcaatgatggggat 558 ||| ||||| |||||||| |||||||| ||||| Sbjct: 1334 ttttgtgggtgtctagcatcttcaatgattgggat 1300
>ref|XM_527108.1| PREDICTED: Pan troglodytes similar to fibrillarin (LOC471730), mRNA Length = 882 Score = 50.1 bits (25), Expect = 0.011 Identities = 43/49 (87%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 |||||||||| |||||||||||||| || |||| |||||| || ||||| Sbjct: 727 tggagtcgatgcagttggccttgatggagatgagaaagtggcccccatt 679 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 272 tggtcacgctcaaagggctccagggtcacctgctc 306 ||||| |||||| ||||||||||||||| |||||| Sbjct: 830 tggtcccgctcatagggctccagggtcagctgctc 796
>ref|XM_364350.1| Magnaporthe grisea 70-15 hypothetical protein (MG09195.4) partial mRNA Length = 966 Score = 50.1 bits (25), Expect = 0.011 Identities = 43/49 (87%) Strand = Plus / Minus Query: 539 gcatcctcaatgatggggatcacattggtcctcttcttggccatgttga 587 |||||||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 653 gcatcctcaacaatggggatgacgttggtcctcttggtggccatgttga 605
>gb|BC098513.1| Rattus norvegicus cDNA clone IMAGE:7124518, **** WARNING: chimeric clone **** Length = 6234 Score = 50.1 bits (25), Expect = 0.011 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 gccttctgcttcttgggcatcctgt 251 ||||||||||||||||||||||||| Sbjct: 863 gccttctgcttcttgggcatcctgt 887
>ref|XM_786698.1| PREDICTED: Strongylocentrotus purpuratus similar to fibrillarin (LOC586941), mRNA Length = 577 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgacc 417 |||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 179 gagtcgatgcagtttgccttaattgagatgacaaagtgacc 139
>emb|X77962.1|TTFIBR T.thermophila Fibrillarin mRNA Length = 1493 Score = 50.1 bits (25), Expect = 0.011 Identities = 79/97 (81%) Strand = Plus / Minus Query: 560 acattggtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactcc 619 |||||||| |||||||| ||||| || || | ||| || ||||| | ||| ||||| || Sbjct: 614 acattggttctcttcttagccatatttaccaaatctctaccacttctgtgagagaattcg 555 Query: 620 acagcatacaccagcccagtcggtccaacaatatcag 656 |||||||| || | ||||| |||||||||||||||| Sbjct: 554 acagcatagacaacaccagtgggtccaacaatatcag 518
>gb|AC020894.5| Homo sapiens chromosome 5 clone CTC-293A9, complete sequence Length = 166983 Score = 50.1 bits (25), Expect = 0.011 Identities = 43/49 (87%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 |||||||||| |||||||||||||| || |||| |||||| || ||||| Sbjct: 86289 tggagtcgatgcagttggccttgatggagatgagaaagtggcccccatt 86241 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 272 tggtcacgctcaaagggctccagggtcacctgctc 306 ||||| |||||| ||||||||||||||| |||||| Sbjct: 86392 tggtcccgctcatagggctccagggtcagctgctc 86358
>ref|XM_940931.1| PREDICTED: Homo sapiens similar to fibrillarin (LOC651718), mRNA Length = 1571 Score = 50.1 bits (25), Expect = 0.011 Identities = 43/49 (87%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 |||||||||| |||||||||||||| || |||| |||||| || ||||| Sbjct: 1297 tggagtcgatgcagttggccttgatggagatgagaaagtggcccccatt 1249 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 272 tggtcacgctcaaagggctccagggtcacctgctc 306 ||||| |||||| ||||||||||||||| |||||| Sbjct: 1400 tggtcccgctcatagggctccagggtcagctgctc 1366
>ref|XM_293903.6| PREDICTED: Homo sapiens similar to fibrillarin (LOC345630), mRNA Length = 1124 Score = 50.1 bits (25), Expect = 0.011 Identities = 43/49 (87%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 |||||||||| |||||||||||||| || |||| |||||| || ||||| Sbjct: 850 tggagtcgatgcagttggccttgatggagatgagaaagtggcccccatt 802 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 272 tggtcacgctcaaagggctccagggtcacctgctc 306 ||||| |||||| ||||||||||||||| |||||| Sbjct: 953 tggtcccgctcatagggctccagggtcagctgctc 919
>ref|XM_573266.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2310003P10 (LOC498067), mRNA Length = 2508 Score = 50.1 bits (25), Expect = 0.011 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 gccttctgcttcttgggcatcctgt 251 ||||||||||||||||||||||||| Sbjct: 49 gccttctgcttcttgggcatcctgt 73
>ref|XM_343874.2| PREDICTED: Rattus norvegicus similar to fibrillarin (LOC363563), mRNA Length = 870 Score = 50.1 bits (25), Expect = 0.011 Identities = 31/33 (93%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatga 407 |||||||||| |||||||||||||| ||||||| Sbjct: 715 tggagtcgatgcagttggccttgatggaaatga 683
>ref|XM_230574.3| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ20507 (predicted) (LOC311405), mRNA Length = 4338 Score = 50.1 bits (25), Expect = 0.011 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 gccttctgcttcttgggcatcctgt 251 ||||||||||||||||||||||||| Sbjct: 476 gccttctgcttcttgggcatcctgt 500
>ref|XM_608002.2| PREDICTED: Bos taurus similar to fibrillarin (LOC529551), mRNA Length = 1820 Score = 48.1 bits (24), Expect = 0.042 Identities = 42/48 (87%) Strand = Plus / Minus Query: 571 cttcttggccatgttgacaagatccctgccactgcggtgcgagaactc 618 ||||||||||| |||||| ||||||| |||| |||||| |||||||| Sbjct: 983 cttcttggccacgttgacgagatcccggccagcgcggtgggagaactc 936
>ref|NM_203770.1| Xenopus tropicalis fibrillarin (MGC76139), mRNA Length = 1628 Score = 48.1 bits (24), Expect = 0.042 Identities = 122/152 (80%), Gaps = 2/152 (1%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 ||||||| || ||||| |||||||| || |||||||| || || || || |||||||||| Sbjct: 849 tggagtcaatgcagtttgccttgatggatatgacaaaatggcctccgttcttcaggaagt 790 Query: 435 -atgaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagata 493 ||| || || ||||| | |||||| | |||||||||||| || ||||| | |||| | Sbjct: 789 tatgg-gcgttgagggcgacgatcctggtctgatcaggctgcgccacatccgcaaagaca 731 Query: 494 acatcaaccatgccaaccaacatgcggtactt 525 || || ||||| || || |||||||||||||| Sbjct: 730 acgtccaccattcctactaacatgcggtactt 699
>gb|BC062511.1| Xenopus tropicalis fibrillarin, mRNA (cDNA clone MGC:76139 IMAGE:5335178), complete cds Length = 1628 Score = 48.1 bits (24), Expect = 0.042 Identities = 122/152 (80%), Gaps = 2/152 (1%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 ||||||| || ||||| |||||||| || |||||||| || || || || |||||||||| Sbjct: 849 tggagtcaatgcagtttgccttgatggatatgacaaaatggcctccgttcttcaggaagt 790 Query: 435 -atgaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagata 493 ||| || || ||||| | |||||| | |||||||||||| || ||||| | |||| | Sbjct: 789 tatgg-gcgttgagggcgacgatcctggtctgatcaggctgcgccacatccgcaaagaca 731 Query: 494 acatcaaccatgccaaccaacatgcggtactt 525 || || ||||| || || |||||||||||||| Sbjct: 730 acgtccaccattcctactaacatgcggtactt 699
>emb|CT485745.1| Xenopus tropicalis finished cDNA, clone TNeu079a21 Length = 1543 Score = 48.1 bits (24), Expect = 0.042 Identities = 122/152 (80%), Gaps = 2/152 (1%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 ||||||| || ||||| |||||||| || |||||||| || || || || |||||||||| Sbjct: 831 tggagtcaatgcagtttgccttgatggatatgacaaaatggcctccgttcttcaggaagt 772 Query: 435 -atgaagcattaagggccaagatcctagcctgatcaggctgtgcaacatctgagaagata 493 ||| || || ||||| | |||||| | |||||||||||| || ||||| | |||| | Sbjct: 771 tatgg-gcgttgagggcgacgatcctggtctgatcaggctgcgccacatccgcaaagaca 713 Query: 494 acatcaaccatgccaaccaacatgcggtactt 525 || || ||||| || || |||||||||||||| Sbjct: 712 acgtccaccattcctactaacatgcggtactt 681
>dbj|AP006109.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39G11, TM0195a, complete sequence Length = 73192 Score = 48.1 bits (24), Expect = 0.042 Identities = 57/68 (83%) Strand = Plus / Minus Query: 248 ctgtatccaccgacgacacaggcatggtcacgctcaaagggctccagggtcacctgctcc 307 ||||||||||| || ||||| |||||||| |||||||| || || ||||| || ||||| Sbjct: 43482 ctgtatccaccaacaacacacgcatggtcgcgctcaaatggttcaagggtgacttgctca 43423 Query: 308 gaaggctt 315 | |||||| Sbjct: 43422 gcaggctt 43415
>gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome 17, complete sequence Length = 207537 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Plus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||| || ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 37094 gagtcaatgcagttggccttaatggaaatcacaaagtgacctccatt 37140
>ref|XM_976047.1| PREDICTED: Mus musculus similar to fibrillarin (LOC638739), mRNA Length = 171 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||| || ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 128 gagtcaatgcagttggccttaatggaaatcacaaagtgacctccatt 82
>ref|XM_914861.1| PREDICTED: Mus musculus similar to fibrillarin (LOC638739), mRNA Length = 171 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||| || ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 128 gagtcaatgcagttggccttaatggaaatcacaaagtgacctccatt 82
>ref|XM_885116.1| PREDICTED: Mus musculus similar to fibrillarin (LOC620725), mRNA Length = 171 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||| || ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 128 gagtcaatgcagttggccttaatggaaatcacaaagtgacctccatt 82
>gb|AC133525.2| Mus musculus BAC clone RP23-58N6 from chromosome 18, complete sequence Length = 226579 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagt 413 ||||||| |||||||||||||| || ||||| ||||||| Sbjct: 206767 tggagtcaatacagttggccttaatggaaatcacaaagt 206729 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 ttggtcctcttcttggccatg 583 ||||||||||||||||||||| Sbjct: 206579 ttggtcctcttcttggccatg 206559
>ref|XM_817891.1| Trypanosoma brucei TREU927 fibrillarin (Tb10.6k15.3160) partial mRNA Length = 903 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||||||||||||| ||||| ||||| || | ||||||||||| Sbjct: 746 gagtcgatacagttggctttgatagaaattacgtaatgaccaccatt 700
>gb|AF168719.1|AF168719 Trypanosoma brucei rhodesiense fibrillarin mRNA, complete cds Length = 1074 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||||||||||||| ||||| ||||| || | ||||||||||| Sbjct: 746 gagtcgatacagttggctttgatagaaattacgtaatgaccaccatt 700
>gb|AF051745.1|AF051745 Picea mariana fibrillarin (Sb21) gene, Sb21-474 allele, partial cds Length = 422 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 230 ttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtc 276 ||||| ||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 303 ttctgtttcttgggcattctgtacccacctacaacacaagcatggtc 257
>gb|AF051744.1|AF051744 Picea mariana fibrillarin (Sb21) gene, Sb21-473 allele, partial cds Length = 421 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 230 ttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtc 276 ||||| ||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 302 ttctgtttcttgggcattctgtacccacctacaacacaagcatggtc 256
>gb|AF051743.1|AF051743 Picea mariana fibrillarin (Sb21) gene, Sb21-471 allele, partial cds Length = 419 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 230 ttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtc 276 ||||| ||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 302 ttctgtttcttgggcattctgtacccacctacaacacaagcatggtc 256
>gb|AF051216.1|AF051216 Picea mariana probable fibrillarin (Sb21) mRNA, partial cds Length = 1110 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 230 ttctgcttcttgggcatcctgtatccaccgacgacacaggcatggtc 276 ||||| ||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 728 ttctgtttcttgggcattctgtacccacctacaacacaagcatggtc 682
>gb|AC102397.7| Mus musculus chromosome 18, clone RP24-195H11, complete sequence Length = 166694 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagt 413 ||||||| |||||||||||||| || ||||| ||||||| Sbjct: 160261 tggagtcaatacagttggccttaatggaaatcacaaagt 160299 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 563 ttggtcctcttcttggccatg 583 ||||||||||||||||||||| Sbjct: 160449 ttggtcctcttcttggccatg 160469
>gb|BT020144.1| Homo sapiens fibrillarin mRNA, complete cds Length = 966 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 839 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 782 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 781 caaagtgtcctccatt 766
>gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete sequence Length = 175448 Score = 44.1 bits (22), Expect = 0.65 Identities = 49/58 (84%) Strand = Plus / Plus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||| ||| ||||||||| || ||||||||||| || || || |||||||||| Sbjct: 174826 gagtcgatgcaggaggccttgatcgagatgacaaagtgtccgccgttcttcaggaagt 174883
>ref|XM_459686.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E09251g) partial mRNA Length = 990 Score = 44.1 bits (22), Expect = 0.65 Identities = 70/86 (81%) Strand = Plus / Minus Query: 497 tcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgggg 556 |||||||| |||| |||||| ||||| ||| ||||| | |||||| ||||| || ||| Sbjct: 719 tcaaccataccaatcaacatacggtatttttgtgggtgacgagcatcgtcaataattggg 660 Query: 557 atcacattggtcctcttcttggccat 582 || ||||| | |||||||||||||| Sbjct: 659 atgacattaggtctcttcttggccat 634
>ref|XM_591329.2| PREDICTED: Bos taurus hypothetical LOC513620, transcript variant 1 (LOC513620), mRNA Length = 2960 Score = 44.1 bits (22), Expect = 0.65 Identities = 25/26 (96%) Strand = Plus / Plus Query: 226 cgccttctgcttcttgggcatcctgt 251 ||||||||||||| |||||||||||| Sbjct: 429 cgccttctgcttcctgggcatcctgt 454
>ref|XM_865449.1| PREDICTED: Bos taurus hypothetical LOC513620, transcript variant 3 (LOC513620), mRNA Length = 2922 Score = 44.1 bits (22), Expect = 0.65 Identities = 25/26 (96%) Strand = Plus / Plus Query: 226 cgccttctgcttcttgggcatcctgt 251 ||||||||||||| |||||||||||| Sbjct: 391 cgccttctgcttcctgggcatcctgt 416
>ref|NM_001436.2| Homo sapiens fibrillarin (FBL), mRNA Length = 1135 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 898 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 841 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 840 caaagtgtcctccatt 825
>ref|XM_859311.1| PREDICTED: Canis familiaris hypothetical protein LOC609057, transcript variant 2 (LOC609057), mRNA Length = 980 Score = 44.1 bits (22), Expect = 0.65 Identities = 25/26 (96%) Strand = Plus / Plus Query: 226 cgccttctgcttcttgggcatcctgt 251 ||||||||||||| |||||||||||| Sbjct: 472 cgccttctgcttcctgggcatcctgt 497
>ref|XM_846677.1| PREDICTED: Canis familiaris hypothetical protein LOC609057, transcript variant 1 (LOC609057), mRNA Length = 1329 Score = 44.1 bits (22), Expect = 0.65 Identities = 25/26 (96%) Strand = Plus / Plus Query: 226 cgccttctgcttcttgggcatcctgt 251 ||||||||||||| |||||||||||| Sbjct: 821 cgccttctgcttcctgggcatcctgt 846
>ref|XM_448306.1| Candida glabrata CBS138, CAGL0K01859g partial mRNA Length = 972 Score = 44.1 bits (22), Expect = 0.65 Identities = 31/34 (91%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgac 408 |||||||||||||||| |||||||| || ||||| Sbjct: 823 tggagtcgatacagttagccttgatggagatgac 790
>gb|BC015218.2| Homo sapiens fibrillarin, mRNA (cDNA clone IMAGE:3856436), partial cds Length = 887 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 658 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 601 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 600 caaagtgtcctccatt 585
>ref|XM_660676.1| Cryptosporidium hominis TU502 fibrillarin (Chro.80497) partial mRNA Length = 906 Score = 44.1 bits (22), Expect = 0.65 Identities = 34/38 (89%) Strand = Plus / Minus Query: 467 tcaggctgtgcaacatctgagaagataacatcaaccat 504 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 665 tcaggctgggcaacatcagaaaagataacatcgaccat 628
>gb|BC023524.1| Homo sapiens mRNA similar to fibrillarin (cDNA clone IMAGE:4099391) Length = 2196 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 1809 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 1752 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 1751 caaagtgtcctccatt 1736
>gb|BC019260.1| Homo sapiens fibrillarin, mRNA (cDNA clone MGC:2347 IMAGE:3504198), complete cds Length = 1163 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 907 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 850 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 849 caaagtgtcctccatt 834
>ref|XM_791348.1| PREDICTED: Strongylocentrotus purpuratus similar to fibrillarin (LOC591797), mRNA Length = 1246 Score = 44.1 bits (22), Expect = 0.65 Identities = 34/38 (89%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtg 414 |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 820 gagtcgatgcagtttgccttaattgagatgacaaagtg 783
>emb|X56597.1|HSFIB Human humFib mRNA for fibrillarin Length = 1090 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 898 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 841 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 840 caaagtgtcctccatt 825
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 44.1 bits (22), Expect = 0.65 Identities = 70/86 (81%) Strand = Plus / Plus Query: 497 tcaaccatgccaaccaacatgcggtactttgcagggtgcctagcatcctcaatgatgggg 556 |||||||| |||| |||||| ||||| ||| ||||| | |||||| ||||| || ||| Sbjct: 675444 tcaaccataccaatcaacatacggtatttttgtgggtgacgagcatcgtcaataattggg 675503 Query: 557 atcacattggtcctcttcttggccat 582 || ||||| | |||||||||||||| Sbjct: 675504 atgacattaggtctcttcttggccat 675529
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 44.1 bits (22), Expect = 0.65 Identities = 31/34 (91%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgac 408 |||||||||||||||| |||||||| || ||||| Sbjct: 166108 tggagtcgatacagttagccttgatggagatgac 166075
>gb|BT007521.1| Synthetic construct Homo sapiens fibrillarin mRNA, partial cds Length = 966 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 839 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 782 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 781 caaagtgtcctccatt 766
>gb|BT006830.1| Homo sapiens fibrillarin mRNA, complete cds Length = 966 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 839 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 782 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 781 caaagtgtcctccatt 766
>emb|CR626204.1| full-length cDNA clone CS0DC013YB06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 674 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 467 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 410 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 409 caaagtgtcctccatt 394
>emb|CR624544.1| full-length cDNA clone CS0DK002YE22 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 488 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 281 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 224 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 223 caaagtgtcctccatt 208
>emb|CR622112.1| full-length cDNA clone CS0DC025YP09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1042 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 880 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 823 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 822 caaagtgtcctccatt 807
>emb|CR621210.1| full-length cDNA clone CS0DC015YB15 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1017 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 864 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 807 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 806 caaagtgtcctccatt 791
>emb|CR619571.1| full-length cDNA clone CS0DK005YE11 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 842 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 659 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 602 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 601 caaagtgtcctccatt 586
>emb|CR619306.1| full-length cDNA clone CS0DB001YI10 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1084 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 889 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 832 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 831 caaagtgtcctccatt 816
>emb|CR611406.1| full-length cDNA clone CS0DC017YN11 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1058 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 889 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 832 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 831 caaagtgtcctccatt 816
>emb|CR608183.1| full-length cDNA clone CS0DK012YP18 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1106 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 899 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 842 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 841 caaagtgtcctccatt 826
>emb|CR593763.1| full-length cDNA clone CS0DB003YG09 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 498 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 291 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 234 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 233 caaagtgtcctccatt 218
>emb|CR592096.1| full-length cDNA clone CS0DC026YC19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1080 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 905 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 848 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 847 caaagtgtcctccatt 832
>ref|NM_079093.2| Drosophila melanogaster Fibrillarin CG9888-RA (Fib), mRNA Length = 1331 Score = 44.1 bits (22), Expect = 0.65 Identities = 49/58 (84%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||| ||| ||||||||| || ||||||||||| || || || |||||||||| Sbjct: 1013 gagtcgatgcaggaggccttgatcgagatgacaaagtgtccgccgttcttcaggaagt 956
>gb|BC019609.1|BC019609 Homo sapiens, clone IMAGE:4538098, mRNA, partial cds Length = 883 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 657 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 600 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 599 caaagtgtcctccatt 584
>emb|CR457069.1| Homo sapiens full open reading frame cDNA clone RZPDo834F0511D for gene FBL, fibrillarin; complete cds, incl. stopcodon Length = 966 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 839 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 782 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 781 caaagtgtcctccatt 766
>ref|XM_627321.1| Cryptosporidium parvum Iowa II fibrillarin. RNA methylase (cgd8_4330), partial mRNA Length = 906 Score = 44.1 bits (22), Expect = 0.65 Identities = 34/38 (89%) Strand = Plus / Minus Query: 467 tcaggctgtgcaacatctgagaagataacatcaaccat 504 |||||||| |||||||| || ||||||||||| ||||| Sbjct: 665 tcaggctgggcaacatcagaaaagataacatcgaccat 628
>ref|NM_074290.2| Caenorhabditis elegans T01C3.7 (fibrillarin) mRNA, complete cds Length = 1218 Score = 44.1 bits (22), Expect = 0.65 Identities = 52/62 (83%) Strand = Plus / Minus Query: 464 tgatcaggctgtgcaacatctgagaagataacatcaaccatgccaaccaacatgcggtac 523 ||||| ||||| |||||||| || ||||| ||||| ||||| || || | |||||||||| Sbjct: 894 tgatctggctgagcaacatcagaaaagatgacatcgaccattccgacaagcatgcggtac 835 Query: 524 tt 525 || Sbjct: 834 tt 833
>gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, region 59C-59D, BAC clone BACR08P09, complete sequence Length = 181463 Score = 44.1 bits (22), Expect = 0.65 Identities = 49/58 (84%) Strand = Plus / Plus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||| ||| ||||||||| || ||||||||||| || || || |||||||||| Sbjct: 111496 gagtcgatgcaggaggccttgatcgagatgacaaagtgtccgccgttcttcaggaagt 111553
>dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, section 76/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 617 tccacagcatacaccagcccag 638 |||||||||||||||||||||| Sbjct: 317390 tccacagcatacaccagcccag 317411
>gb|AY190941.1| Drosophila erecta clone DERF01_12_N08 (D1431) genomic sequence Length = 43101 Score = 44.1 bits (22), Expect = 0.65 Identities = 49/58 (84%) Strand = Plus / Plus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||| ||| ||||||||| || ||||||||||| || || || |||||||||| Sbjct: 27633 gagtcgatgcaggaggccttgatcgagatgacaaagtgtccgccgttcttcaggaagt 27690
>emb|BX323812.10| Zebrafish DNA sequence from clone CH211-150H8 in linkage group 2, complete sequence Length = 153556 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 caacaccatataaaccacctag 119 |||||||||||||||||||||| Sbjct: 148613 caacaccatataaaccacctag 148634
>gb|AY892716.1| Synthetic construct Homo sapiens clone FLH024765.01L fibrillarin (FBL) mRNA, partial cds Length = 966 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 839 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 782 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 781 caaagtgtcctccatt 766
>dbj|BS000161.1| Pan troglodytes chromosome 22 clone:PTB-058P10, map 22, complete sequences Length = 78415 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 617 tccacagcatacaccagcccag 638 |||||||||||||||||||||| Sbjct: 52285 tccacagcatacaccagcccag 52306
>gb|AY890230.1| Synthetic construct Homo sapiens clone FLH024770.01X fibrillarin (FBL) mRNA, complete cds Length = 966 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 839 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 782 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 781 caaagtgtcctccatt 766
>gb|AY888436.1| Synthetic construct Homo sapiens clone FLH007298.01X fibrillarin (FBL) mRNA, complete cds Length = 966 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 839 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 782 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 781 caaagtgtcctccatt 766
>gb|AE003459.3| Drosophila melanogaster chromosome 2R, section 67 of 73 of the complete sequence Length = 283700 Score = 44.1 bits (22), Expect = 0.65 Identities = 49/58 (84%) Strand = Plus / Plus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||| ||| ||||||||| || ||||||||||| || || || |||||||||| Sbjct: 177309 gagtcgatgcaggaggccttgatcgagatgacaaagtgtccgccgttcttcaggaagt 177366
>gb|BT001738.1| Drosophila melanogaster RE72617 full insert cDNA Length = 1235 Score = 44.1 bits (22), Expect = 0.65 Identities = 49/58 (84%) Strand = Plus / Minus Query: 377 gagtcgatacagttggccttgattgaaatgacaaagtgaccaccatttttcaggaagt 434 |||||||| ||| ||||||||| || ||||||||||| || || || |||||||||| Sbjct: 974 gagtcgatgcaggaggccttgatcgagatgacaaagtgtccgccgttcttcaggaagt 917
>gb|AF017257.1|AF017257 Homo sapiens chromosome 21 derived BAC containing erythroblastosis virus oncogene homolog 2 protein (ets-2) gene, complete cds, complete sequence Length = 101569 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 617 tccacagcatacaccagcccag 638 |||||||||||||||||||||| Sbjct: 16361 tccacagcatacaccagcccag 16382
>gb|M59849.1|HUMFIBAA Human fibrillarin (Hfib1) mRNA, complete cds Length = 1104 Score = 44.1 bits (22), Expect = 0.65 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgg--gagcctggatggagtcgatacagttggccttgattgaaatga 407 |||||||||||||||| ||| ||| ||||||| || ||||||||||| || ||||| | Sbjct: 867 gcaaacacggcctcggctgaggctg--tggagtcaatgcagttggccttaatggaaatca 810 Query: 408 caaagtgaccaccatt 423 ||||||| || ||||| Sbjct: 809 caaagtgtcctccatt 794
>dbj|AP001040.1| Homo sapiens genomic DNA, chromosome 21, clone:Q109A8, ERG-ETS2 region, complete sequence Length = 45489 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 617 tccacagcatacaccagcccag 638 |||||||||||||||||||||| Sbjct: 18639 tccacagcatacaccagcccag 18660
>gb|AC154650.2| Mus musculus BAC clone RP23-162K2 from chromosome 17, complete sequence Length = 210417 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 35925 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 35877 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 35734 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 35675 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 35674 tagaccagaccatccgggccgacaatatcagagacgtggga 35634
>gb|BC003813.1| Mus musculus fibrillarin, mRNA (cDNA clone MGC:6139 IMAGE:3487295), complete cds Length = 1200 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 905 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 857 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 714 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 655 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 654 tagaccagaccatccgggccgacaatatcagagacgtggga 614
>ref|NM_007991.2| Mus musculus fibrillarin (Fbl), mRNA Length = 1200 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 905 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 857 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 714 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 655 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 654 tagaccagaccatccgggccgacaatatcagagacgtggga 614
>ref|XR_002190.1| PREDICTED: Mus musculus similar to fibrillarin (LOC621312), mRNA Length = 4275 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 563 ttggtcctcttcttggccatgttga 587 ||||||||||||||||||| ||||| Sbjct: 3821 ttggtcctcttcttggccaagttga 3797
>ref|XR_002870.1| PREDICTED: Mus musculus similar to fibrillarin (LOC621312), mRNA Length = 4277 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 563 ttggtcctcttcttggccatgttga 587 ||||||||||||||||||| ||||| Sbjct: 3823 ttggtcctcttcttggccaagttga 3799
>ref|XM_382046.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01870.1) partial mRNA Length = 975 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 gtcgatacagttggccttgat 399 ||||||||||||||||||||| Sbjct: 828 gtcgatacagttggccttgat 808
>gb|AC124699.4| Mus musculus BAC clone RP24-187B13 from chromosome 1, complete sequence Length = 177793 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 tgaaatgacaaagtgaccacc 420 ||||||||||||||||||||| Sbjct: 85335 tgaaatgacaaagtgaccacc 85355
>ref|XM_758930.1| Theileria parva strain Muguga chromosome 4 phosphatidylinositol 4-kinase (TP04_0387) partial mRNA Length = 3522 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 atctgagaagataacatcaac 501 ||||||||||||||||||||| Sbjct: 300 atctgagaagataacatcaac 280
>emb|CR701072.2|CNS0G3WC Tetraodon nigroviridis full-length cDNA Length = 1293 Score = 42.1 bits (21), Expect = 2.6 Identities = 54/65 (83%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaaatgaca 409 |||||||| ||||| |||||| ||||||| |||||||| ||||| || || |||||| Sbjct: 876 gcaaacactgcctctggagccgccgtggagtctatacagttagcctttatggagatgaca 817 Query: 410 aagtg 414 ||||| Sbjct: 816 aagtg 812
>emb|CR682822.2|CNS0FPTE Tetraodon nigroviridis full-length cDNA Length = 1274 Score = 42.1 bits (21), Expect = 2.6 Identities = 54/65 (83%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaaatgaca 409 |||||||| ||||| |||||| ||||||| |||||||| ||||| || || |||||| Sbjct: 875 gcaaacactgcctctggagccgccgtggagtctatacagttagcctttatggagatgaca 816 Query: 410 aagtg 414 ||||| Sbjct: 815 aagtg 811
>emb|CR682431.2|CNS0FPIJ Tetraodon nigroviridis full-length cDNA Length = 1100 Score = 42.1 bits (21), Expect = 2.6 Identities = 54/65 (83%) Strand = Plus / Minus Query: 350 gcaaacacggcctcgggagcctggatggagtcgatacagttggccttgattgaaatgaca 409 |||||||| ||||| |||||| ||||||| |||||||| ||||| || || |||||| Sbjct: 668 gcaaacactgcctctggagccgccgtggagtctatacagttagcctttatggagatgaca 609 Query: 410 aagtg 414 ||||| Sbjct: 608 aagtg 604
>emb|AL365440.13| Human DNA sequence from clone RP11-144L1 on chromosome 1 Contains the OR10T1P olfactory receptor, family 10, subfamily T, member 1 pseudogene, an etoposide induced 2.4 mRNA (EI24) pseudogene, the OR10K1 gene for olfactory receptor, family 10, subfamily K, member 1, the OR10R2 gene for olfactory receptor, family 10, subfamily R, member 2, the OR10R3P olfactory receptor, family 10, subfamily R, member 3 pseudogene, a novel gene, the OR10R1P olfactory receptor, family 10, subfamily R, member 1 pseudogene, a heat shock 90kDa protein 1, alpha (HSPCA) pseudogene and the OR6Y1 gene for olfactory receptor, family 6, subfamily Y, member 1, complete sequence Length = 126954 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 gaatgcaaaatcattcagccactta 96 ||||| ||||||||||||||||||| Sbjct: 112149 gaatgtaaaatcattcagccactta 112173
>emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chromosome 9 Contains three novel genes, the 5' end of a novel gene, a novel pseudogene and seven CpG islands, complete sequence Length = 165696 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aactgtgcaaatgaggcaagt 24 ||||||||||||||||||||| Sbjct: 6875 aactgtgcaaatgaggcaagt 6855
>emb|AL139429.8| Human DNA sequence from clone RP11-110K14 on chromosome 20 Contains part of the SLC24A3 gene for solute carrier family 24 (sodium/potassium/calcium exchanger) member 3, complete sequence Length = 90052 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 710 accaggagcaatccagatgtt 730 ||||||||||||||||||||| Sbjct: 32523 accaggagcaatccagatgtt 32503
>emb|Z22593.1|MMFIBRLNA M.musculus fibrillarin mRNA Length = 1127 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 881 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 833 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 690 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 631 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 630 tagaccagaccatccgggccgacaatatcagagacgtggga 590
>gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome 13, complete sequence Length = 206249 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 563 ttggtcctcttcttggccatgttga 587 ||||||||||||||||||| ||||| Sbjct: 177657 ttggtcctcttcttggccaagttga 177681
>gb|AC183093.2| Mus musculus BAC clone RP24-107H20 from chromosome 17, complete sequence Length = 181403 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 141396 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 141348 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 141205 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 141146 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 141145 tagaccagaccatccgggccgacaatatcagagacgtggga 141105
>dbj|AK146328.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730053O10 product:fibrillarin, full insert sequence Length = 1151 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 885 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 837 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 694 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 635 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 634 tagaccagaccatccgggccgacaatatcagagacgtggga 594
>dbj|AK012620.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700096M04 product:fibrillarin, full insert sequence Length = 1154 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 889 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 841 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 698 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 639 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 638 tagaccagaccatccgggccgacaatatcagagacgtggga 598
>dbj|AK048462.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130062I06 product:Similar to fibrillarin, full insert sequence Length = 4275 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 563 ttggtcctcttcttggccatgttga 587 ||||||||||||||||||| ||||| Sbjct: 3821 ttggtcctcttcttggccaagttga 3797
>emb|AL112799.1|CNS01ADJ Botrytis cinerea strain T4 cDNA library Length = 600 Score = 42.1 bits (21), Expect = 2.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 464 tgatcaggctgtgcaacatctgagaagataacatcaaccat 504 |||||||| ||||||||||| | ||||||||| || ||||| Sbjct: 55 tgatcaggttgtgcaacatcggcgaagataacgtcgaccat 15
>gb|AC157497.3| Pan troglodytes BAC clone CH251-490K17 from chromosome unknown, complete sequence Length = 207664 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 aactgtgcaaatgaggcaagt 24 ||||||||||||||||||||| Sbjct: 183649 aactgtgcaaatgaggcaagt 183629
>gb|BC092274.1| Mus musculus fibrillarin, mRNA (cDNA clone MGC:102608 IMAGE:4196645), complete cds Length = 1214 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 931 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 883 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 740 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 681 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 680 tagaccagaccatccgggccgacaatatcagagacgtggga 640
>ref|NG_005403.1| Mus musculus fibrillarin-like (LOC545184) pseudogene on chromosome 17 Length = 1332 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 966 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 918 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 775 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 716 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 715 tagaccagaccatccgggccgacaatatcagagacgtggga 675
>gb|AC092481.28| Mus musculus strain C57BL/6J chromosome 17 clone rp23-456p8, complete sequence Length = 195988 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 138764 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 138716 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 138573 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 138514 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 138513 tagaccagaccatccgggccgacaatatcagagacgtggga 138473
>gb|AC092480.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-387f2, complete sequence Length = 213144 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 47783 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 47735 Score = 42.1 bits (21), Expect = 2.6 Identities = 81/101 (80%) Strand = Plus / Minus Query: 566 gtcctcttcttggccatgttgacaagatccctgccactgcggtgcgagaactccacagca 625 |||||||||||||||| ||||| || || | |||| |||||| |||||||| || || Sbjct: 47592 gtcctcttcttggccaagttgatgaggtcacggccagagcggtgggagaactcaactgcg 47533 Query: 626 tacaccagcccagtcggtccaacaatatcagacacatggga 666 || ||||| ||| ||| || ||||||||||| || ||||| Sbjct: 47532 tagaccagaccatccgggccgacaatatcagagacgtggga 47492
>dbj|AK116447.1| Ciona intestinalis cDNA, clone:citb040e18, full insert sequence Length = 1311 Score = 42.1 bits (21), Expect = 2.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 611 gagaactccacagcatacaccagcccagtcggtccaacaatatcagacacatg 663 ||||| |||||||||||||||| || ||| |||||||||||||| ||||| Sbjct: 670 gagaattccacagcatacaccaatccttccgggccaacaatatcagaaacatg 618
>dbj|AK113783.1| Ciona intestinalis cDNA, clone:cicl009d22, full insert sequence Length = 1015 Score = 42.1 bits (21), Expect = 2.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 611 gagaactccacagcatacaccagcccagtcggtccaacaatatcagacacatg 663 ||||| |||||||||||||||| || ||| |||||||||||||| ||||| Sbjct: 371 gagaattccacagcatacaccaatccttccgggccaacaatatcagaaacatg 319
>gb|AC161446.3| Mus musculus BAC clone RP24-260B15 from chromosome 13, complete sequence Length = 181988 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 563 ttggtcctcttcttggccatgttga 587 ||||||||||||||||||| ||||| Sbjct: 70638 ttggtcctcttcttggccaagttga 70662
>gb|M30448.1|HUMCSK2B Human casein kinase II beta subunit mRNA, complete cds Length = 2527 Score = 42.1 bits (21), Expect = 2.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 375 tggagtcgatacagttggccttgattgaaatgacaaagtgaccaccatt 423 ||||||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct: 2293 tggagtcaatgcagttggccttaatggaaatcacaaagtgtcctccatt 2245
>dbj|AP002533.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 2/4 Length = 300000 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 gaatgcaaaatcattcagccactta 96 ||||| ||||||||||||||||||| Sbjct: 59532 gaatgtaaaatcattcagccactta 59556
>dbj|AB045359.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:456n8, complete sequence Length = 161318 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 gaatgcaaaatcattcagccactta 96 ||||| ||||||||||||||||||| Sbjct: 112055 gaatgtaaaatcattcagccactta 112079 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,694,865 Number of Sequences: 3902068 Number of extensions: 5694865 Number of successful extensions: 105377 Number of sequences better than 10.0: 163 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 104825 Number of HSP's gapped (non-prelim): 505 length of query: 738 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 715 effective length of database: 17,143,297,704 effective search space: 12257457858360 effective search space used: 12257457858360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)