ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags39a11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472335.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2667 Score = 656 bits (331), Expect = 0.0 Identities = 493/547 (90%) Strand = Plus / Minus Query: 212 cactcagggcaggcgccagcggctctgcaataccactcccactgttgagaaccaccacct 271 ||||||| ||||| ||||| || || | || |||||| |||| ||| ||||| | ||||| Sbjct: 2662 cactcagagcaggtgccagtggttccggaacaccactaccaccgttaagaactatcacct 2603 Query: 272 taccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagca 331 | || |||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 2602 tgccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaaca 2543 Query: 332 tcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcac 391 |||||||||| | |||||| |||| ||||||||||||||| || |||||||||||||||| Sbjct: 2542 tcttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcac 2483 Query: 392 catagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacctgga 451 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 2482 catagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctgga 2423 Query: 452 ggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagctatct 511 |||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 2422 ggtcgatgtcctttgccttgagcctgtcaaacacttctttgagcataatatcagcaatct 2363 Query: 512 ctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaaga 571 | || ||||||| ||| || ||||||| ||||||||||||||| ||||||||||| |||| Sbjct: 2362 ccttaacctccagcttggtaagctgccggaacacaatcatctcgtccaatctgtttaaga 2303 Query: 572 actcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagc 631 ||||||| | ||| |||||||||| ||| || |||||||||||||| ||||| || |||| Sbjct: 2302 actcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtagc 2243 Query: 632 tggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctcgatga 691 |||| |||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 2242 tggtgtctttctcatcatagtcaaggtcaaatccaatcttccgtcctcccttctcaatga 2183 Query: 692 cactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatcaactgtccgtc 751 |||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 2182 cactgcttccaacatttgatgtcatgatcaacagtgtgttcttgaaatcaacagtccgac 2123 Query: 752 ccttgct 758 ||||||| Sbjct: 2122 ccttgct 2116
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 656 bits (331), Expect = 0.0 Identities = 493/547 (90%) Strand = Plus / Plus Query: 212 cactcagggcaggcgccagcggctctgcaataccactcccactgttgagaaccaccacct 271 ||||||| ||||| ||||| || || | || |||||| |||| ||| ||||| | ||||| Sbjct: 19610375 cactcagagcaggtgccagtggttccggaacaccactaccaccgttaagaactatcacct 19610434 Query: 272 taccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagca 331 | || |||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 19610435 tgccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaaca 19610494 Query: 332 tcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcac 391 |||||||||| | |||||| |||| ||||||||||||||| || |||||||||||||||| Sbjct: 19610495 tcttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcac 19610554 Query: 392 catagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacctgga 451 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 19610555 catagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctgga 19610614 Query: 452 ggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagctatct 511 |||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 19610615 ggtcgatgtcctttgccttgagcctgtcaaacacttctttgagcataatatcagcaatct 19610674 Query: 512 ctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaaga 571 | || ||||||| ||| || ||||||| ||||||||||||||| ||||||||||| |||| Sbjct: 19610675 ccttaacctccagcttggtaagctgccggaacacaatcatctcgtccaatctgtttaaga 19610734 Query: 572 actcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagc 631 ||||||| | ||| |||||||||| ||| || |||||||||||||| ||||| || |||| Sbjct: 19610735 actcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtagc 19610794 Query: 632 tggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctcgatga 691 |||| |||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 19610795 tggtgtctttctcatcatagtcaaggtcaaatccaatcttccgtcctcccttctcaatga 19610854 Query: 692 cactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatcaactgtccgtc 751 |||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 19610855 cactgcttccaacatttgatgtcatgatcaacagtgtgttcttgaaatcaacagtccgac 19610914 Query: 752 ccttgct 758 ||||||| Sbjct: 19610915 ccttgct 19610921
>dbj|AK058510.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G07, full insert sequence Length = 1527 Score = 656 bits (331), Expect = 0.0 Identities = 493/547 (90%) Strand = Plus / Minus Query: 212 cactcagggcaggcgccagcggctctgcaataccactcccactgttgagaaccaccacct 271 ||||||| ||||| ||||| || || | || |||||| |||| ||| ||||| | ||||| Sbjct: 1212 cactcagagcaggtgccagtggttccggaacaccactaccaccgttaagaactatcacct 1153 Query: 272 taccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagca 331 | || |||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 1152 tgccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaaca 1093 Query: 332 tcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcac 391 |||||||||| | |||||| |||| ||||||||||||||| || |||||||||||||||| Sbjct: 1092 tcttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcac 1033 Query: 392 catagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacctgga 451 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1032 catagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctgga 973 Query: 452 ggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagctatct 511 |||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 972 ggtcgatgtcctttgccttgagcctgtcaaacacttctttgagcataatatcagcaatct 913 Query: 512 ctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaaga 571 | || ||||||| ||| || ||||||| ||||||||||||||| ||||||||||| |||| Sbjct: 912 ccttaacctccagcttggtaagctgccggaacacaatcatctcgtccaatctgtttaaga 853 Query: 572 actcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagc 631 ||||||| | ||| |||||||||| ||| || |||||||||||||| ||||| || |||| Sbjct: 852 actcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtagc 793 Query: 632 tggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctcgatga 691 |||| |||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 792 tggtgtctttctcatcatagtcaaggtcaaatccaatcttccgtcctcccttctcaatga 733 Query: 692 cactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatcaactgtccgtc 751 |||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 732 cactgcttccaacatttgatgtcatgatcaacagtgtgttcttgaaatcaacagtccgac 673 Query: 752 ccttgct 758 ||||||| Sbjct: 672 ccttgct 666
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 656 bits (331), Expect = 0.0 Identities = 493/547 (90%) Strand = Plus / Plus Query: 212 cactcagggcaggcgccagcggctctgcaataccactcccactgttgagaaccaccacct 271 ||||||| ||||| ||||| || || | || |||||| |||| ||| ||||| | ||||| Sbjct: 61101 cactcagagcaggtgccagtggttccggaacaccactaccaccgttaagaactatcacct 61160 Query: 272 taccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagca 331 | || |||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 61161 tgccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaaca 61220 Query: 332 tcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcac 391 |||||||||| | |||||| |||| ||||||||||||||| || |||||||||||||||| Sbjct: 61221 tcttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcac 61280 Query: 392 catagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacctgga 451 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 61281 catagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctgga 61340 Query: 452 ggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagctatct 511 |||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 61341 ggtcgatgtcctttgccttgagcctgtcaaacacttctttgagcataatatcagcaatct 61400 Query: 512 ctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaaga 571 | || ||||||| ||| || ||||||| ||||||||||||||| ||||||||||| |||| Sbjct: 61401 ccttaacctccagcttggtaagctgccggaacacaatcatctcgtccaatctgtttaaga 61460 Query: 572 actcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagc 631 ||||||| | ||| |||||||||| ||| || |||||||||||||| ||||| || |||| Sbjct: 61461 actcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtagc 61520 Query: 632 tggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctcgatga 691 |||| |||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 61521 tggtgtctttctcatcatagtcaaggtcaaatccaatcttccgtcctcccttctcaatga 61580 Query: 692 cactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatcaactgtccgtc 751 |||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 61581 cactgcttccaacatttgatgtcatgatcaacagtgtgttcttgaaatcaacagtccgac 61640 Query: 752 ccttgct 758 ||||||| Sbjct: 61641 ccttgct 61647
>dbj|D29692.1|RICYK4 Oryza sativa mRNA, partial homologous to ATP-dependent protease gene Length = 349 Score = 434 bits (219), Expect = e-118 Identities = 314/346 (90%) Strand = Plus / Minus Query: 413 cgtcgacaactctatcccggaacttctctgttacctggaggtctatttcctttgccttga 472 |||||||||||||| |||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 349 cgtcgacaactctancccggaacttctctgtcacctggaggtcgatgtcctttgccttga 290 Query: 473 gcctgtcaaacacctctttgagcataatatcagctatctctttcacctccaacttagtca 532 ||||||||||||| |||||||||||||||||||| ||||| || ||||||| ||| || | Sbjct: 289 gcctgtcaaacacttctttgagcataatatcagcaatctccttaacctccagcttggtaa 230 Query: 533 gctgcctgaacacaatcatctcatccaatctgttcaagaactcaggcctgaaatactgct 592 |||||| ||||||||||||||| ||||||||||| ||||||||||| | ||| ||||||| Sbjct: 229 gctgccggaacacaatcatctcgtccaatctgtttaagaactcaggtcggaagtactgct 170 Query: 593 tcaactcctcggtcaccaagctcttgatcctgttatagctggtatctttctcatcagagt 652 ||| ||| || |||||||||||||| ||||| || |||||||| |||||||||||| ||| Sbjct: 169 tcagctcttcagtcaccaagctcttaatcctattgtagctggtgtctttctcatcatagt 110 Query: 653 caaggtcaaacccaatcttccggcctcccttctcgatgacactgcttccgacattcgatg 712 |||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||| |||| Sbjct: 109 caaggtcaaatccaatcttccgtcctcccttctcaatgacactgcttccaacatttgatg 50 Query: 713 tcatgatcaacagtgtgttcttgaaatcaactgtccgtcccttgct 758 ||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 49 tcatgatcaacagtgtgttcttgaaatcaacagtccgacccttgct 4
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 230 bits (116), Expect = 5e-57 Identities = 398/492 (80%) Strand = Plus / Plus Query: 267 caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 326 |||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 7095141 caccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctccccagc 7095200 Query: 327 cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 386 ||||||||||||||||||||||| |||| |||||||| || |||| | || ||||| Sbjct: 7095201 tagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagcggcct 7095260 Query: 387 ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 446 ||||||||||| |||||| | || ||||| || | | ||| ||||||||| || || Sbjct: 7095261 cgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcggtgac 7095320 Query: 447 ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 506 ||||||||| || ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct: 7095321 ctggaggtcaatgtccttggccttgagcctgtcaaagacctccttgagcatgatctcggc 7095380 Query: 507 tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 566 ||||| || ||||||| ||| || || |||||||| || |||||||| || | | ||| Sbjct: 7095381 gatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgagacggtt 7095440 Query: 567 caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 626 | |||||| || | ||| |||||||||| ||||||| || | ||||||||||||| | Sbjct: 7095441 gaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgatcctgct 7095500 Query: 627 atagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctc 686 |||||| | || |||||||| | || || || || || |||||||| || |||||||| Sbjct: 7095501 gtagctgctgtccttctcatcgtaatcgagatcgaaacctatcttccgaccacccttctc 7095560 Query: 687 gatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatcaactgt 746 |||||| ||||||||||| ||||| ||||| || | |||||||||||||| || ||||| Sbjct: 7095561 gatgacgctgcttccgacgttcgaagtcattatgagaagtgtgttcttgaagtccactgt 7095620 Query: 747 ccgtcccttgct 758 | ||||||||| Sbjct: 7095621 tcttcccttgct 7095632
>gb|AY108805.1| Zea mays PCO077883 mRNA sequence Length = 2049 Score = 230 bits (116), Expect = 5e-57 Identities = 386/476 (81%) Strand = Plus / Minus Query: 283 tccacatcaacaatagcagaatcaccttccttgacctcgccagccagcatcttctccgcg 342 |||||||| || || ||||| || || ||||| ||||| || || ||||||||||| || Sbjct: 1829 tccacatctactatggcagagtcgccctcctttacctcccctgcgagcatcttctcagca 1770 Query: 343 aggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcaccatagcttggg 402 |||||||| |||| |||||||| || || || | ||| || | ||||||||||| ||| Sbjct: 1769 aggctgtcctccagcagcctcatgatggctcgcctcagcgggcgtgcaccatagctaggg 1710 Query: 403 ttgtaaccctcgtcgacaactctatcccggaacttctctgttacctggaggtctatttcc 462 ||||| || ||||| || || | ||| ||||||||| || || || || | || ||| Sbjct: 1709 ttgtagccttcgtccaccacccgctccttgaacttctcggtcacttgaagattgatgtcc 1650 Query: 463 tttgccttgagcctgtcaaacacctctttgagcataatatcagctatctctttcacctcc 522 || ||||| ||||||||||| ||||| | |||||| || || |||||||| || ||||| Sbjct: 1649 ttggccttcagcctgtcaaagacctcctggagcatgatgtccgctatctccttgacctcg 1590 Query: 523 aacttagtcagctgcctgaacacaatcatctcatccaatctgttcaagaactcaggcctg 582 | ||| || |||||||||||||| ||||||||||| | | ||| | ||||||||| | | Sbjct: 1589 agcttggtaagctgcctgaacacgatcatctcatcgagacggttgaggaactcaggtcgg 1530 Query: 583 aaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagctggtatctttc 642 ||||||||||||| ||||||| | |||| ||||||||||||| | ||||| | || ||| Sbjct: 1529 aaatactgcttcatctcctcgatgaccaggctcttgatcctgctgtagctactgtccttc 1470 Query: 643 tcatcagagtcaaggtcaaacccaatcttccggcctcccttctcgatgacactgcttccg 702 |||||||||||||||||||| || ||||||| || |||||||||||||||||||| || Sbjct: 1469 tcatcagagtcaaggtcaaatccgatcttccttccacccttctcgatgacactgctccct 1410 Query: 703 acattcgatgtcatgatcaacagtgtgttcttgaaatcaactgtccgtcccttgct 758 ||||| || |||||||||| |||||||||||||| || || |||| ||||||||| Sbjct: 1409 acatttgaggtcatgatcaggagtgtgttcttgaagtccaccgtccttcccttgct 1354
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 230 bits (116), Expect = 5e-57 Identities = 398/492 (80%) Strand = Plus / Plus Query: 267 caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 326 |||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 7095020 caccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctccccagc 7095079 Query: 327 cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 386 ||||||||||||||||||||||| |||| |||||||| || |||| | || ||||| Sbjct: 7095080 tagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagcggcct 7095139 Query: 387 ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 446 ||||||||||| |||||| | || ||||| || | | ||| ||||||||| || || Sbjct: 7095140 cgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcggtgac 7095199 Query: 447 ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 506 ||||||||| || ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct: 7095200 ctggaggtcaatgtccttggccttgagcctgtcaaagacctccttgagcatgatctcggc 7095259 Query: 507 tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 566 ||||| || ||||||| ||| || || |||||||| || |||||||| || | | ||| Sbjct: 7095260 gatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgagacggtt 7095319 Query: 567 caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 626 | |||||| || | ||| |||||||||| ||||||| || | ||||||||||||| | Sbjct: 7095320 gaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgatcctgct 7095379 Query: 627 atagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctc 686 |||||| | || |||||||| | || || || || || |||||||| || |||||||| Sbjct: 7095380 gtagctgctgtccttctcatcgtaatcgagatcgaaacctatcttccgaccacccttctc 7095439 Query: 687 gatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatcaactgt 746 |||||| ||||||||||| ||||| ||||| || | |||||||||||||| || ||||| Sbjct: 7095440 gatgacgctgcttccgacgttcgaagtcattatgagaagtgtgttcttgaagtccactgt 7095499 Query: 747 ccgtcccttgct 758 | ||||||||| Sbjct: 7095500 tcttcccttgct 7095511
>emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb0069I24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 68450 Score = 230 bits (116), Expect = 5e-57 Identities = 398/492 (80%) Strand = Plus / Plus Query: 267 caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 326 |||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 62827 caccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctccccagc 62886 Query: 327 cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 386 ||||||||||||||||||||||| |||| |||||||| || |||| | || ||||| Sbjct: 62887 tagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagcggcct 62946 Query: 387 ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 446 ||||||||||| |||||| | || ||||| || | | ||| ||||||||| || || Sbjct: 62947 cgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcggtgac 63006 Query: 447 ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 506 ||||||||| || ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct: 63007 ctggaggtcaatgtccttggccttgagcctgtcaaagacctccttgagcatgatctcggc 63066 Query: 507 tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 566 ||||| || ||||||| ||| || || |||||||| || |||||||| || | | ||| Sbjct: 63067 gatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgagacggtt 63126 Query: 567 caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 626 | |||||| || | ||| |||||||||| ||||||| || | ||||||||||||| | Sbjct: 63127 gaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgatcctgct 63186 Query: 627 atagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctc 686 |||||| | || |||||||| | || || || || || |||||||| || |||||||| Sbjct: 63187 gtagctgctgtccttctcatcgtaatcgagatcgaaacctatcttccgaccacccttctc 63246 Query: 687 gatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatcaactgt 746 |||||| ||||||||||| ||||| ||||| || | |||||||||||||| || ||||| Sbjct: 63247 gatgacgctgcttccgacgttcgaagtcattatgagaagtgtgttcttgaagtccactgt 63306 Query: 747 ccgtcccttgct 758 | ||||||||| Sbjct: 63307 tcttcccttgct 63318
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 230 bits (116), Expect = 5e-57 Identities = 398/492 (80%) Strand = Plus / Plus Query: 267 caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 326 |||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 3441 caccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctccccagc 3500 Query: 327 cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 386 ||||||||||||||||||||||| |||| |||||||| || |||| | || ||||| Sbjct: 3501 tagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagcggcct 3560 Query: 387 ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 446 ||||||||||| |||||| | || ||||| || | | ||| ||||||||| || || Sbjct: 3561 cgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcggtgac 3620 Query: 447 ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 506 ||||||||| || ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct: 3621 ctggaggtcaatgtccttggccttgagcctgtcaaagacctccttgagcatgatctcggc 3680 Query: 507 tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 566 ||||| || ||||||| ||| || || |||||||| || |||||||| || | | ||| Sbjct: 3681 gatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgagacggtt 3740 Query: 567 caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 626 | |||||| || | ||| |||||||||| ||||||| || | ||||||||||||| | Sbjct: 3741 gaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgatcctgct 3800 Query: 627 atagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctc 686 |||||| | || |||||||| | || || || || || |||||||| || |||||||| Sbjct: 3801 gtagctgctgtccttctcatcgtaatcgagatcgaaacctatcttccgaccacccttctc 3860 Query: 687 gatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatcaactgt 746 |||||| ||||||||||| ||||| ||||| || | |||||||||||||| || ||||| Sbjct: 3861 gatgacgctgcttccgacgttcgaagtcattatgagaagtgtgttcttgaagtccactgt 3920 Query: 747 ccgtcccttgct 758 | ||||||||| Sbjct: 3921 tcttcccttgct 3932
>dbj|AK066153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058A21, full insert sequence Length = 3088 Score = 222 bits (112), Expect = 1e-54 Identities = 397/492 (80%) Strand = Plus / Minus Query: 267 caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 326 |||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 2829 caccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctccccagc 2770 Query: 327 cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 386 ||||||||||||||||||||||| |||| |||||||| || |||| | || ||||| Sbjct: 2769 tagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagcggcct 2710 Query: 387 ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 446 ||||||||||| |||||| | || ||||| || | | ||| ||||||||| || || Sbjct: 2709 cgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcggtgac 2650 Query: 447 ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 506 ||||||||| | ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct: 2649 ctggaggtcaacgtccttggccttgagcctgtcaaagacctccttgagcatgatctcggc 2590 Query: 507 tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 566 ||||| || ||||||| ||| || || |||||||| || |||||||| || | | ||| Sbjct: 2589 gatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgagacggtt 2530 Query: 567 caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 626 | |||||| || | ||| |||||||||| ||||||| || | ||||||||||||| | Sbjct: 2529 gaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgatcctgct 2470 Query: 627 atagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctc 686 |||||| | || |||||||| | || || || || || |||||||| || |||||||| Sbjct: 2469 gtagctgctgtccttctcatcgtaatcgagatcgaaacctatcttccgaccacccttctc 2410 Query: 687 gatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatcaactgt 746 |||||| ||||||||||| ||||| ||||| || | |||||||||||||| || ||||| Sbjct: 2409 gatgacgctgcttccgacgttcgaagtcattatgagaagtgtgttcttgaagtccactgt 2350 Query: 747 ccgtcccttgct 758 | ||||||||| Sbjct: 2349 tcttcccttgct 2338
>gb|M32604.1|TOMCD4B Tomato ATP-dependent protease (CD4B) gene, complete cds Length = 5846 Score = 184 bits (93), Expect = 3e-43 Identities = 333/413 (80%) Strand = Plus / Minus Query: 328 agcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctg 387 ||||| ||||| || | |||||| || ||||| ||||||||||| | || |||||| | Sbjct: 5411 agcattttctcagccatgctgtcctctaaaagtctcataatagctcttctcagaggtcgt 5352 Query: 388 gcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacc 447 || |||||||| |||||||| |||||||| || || || || | ||| ||||||| || Sbjct: 5351 gctccatagctagggttgtatccctcgtcaaccaccctgtctctaaacctctctgtcact 5292 Query: 448 tggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagct 507 || || ||||| ||||| | || | ||| ||||| ||||| || ||||| ||||||||| Sbjct: 5291 tgaagttctatctccttaactttcaacctctcaaagacctccttaagcatgatatcagct 5232 Query: 508 atctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttc 567 ||||| || ||||| |||||||| ||||| | ||| |||||||||||||||||||||||| Sbjct: 5231 atctccttaacctctaacttagtgagctgacggaatacaatcatctcatccaatctgttc 5172 Query: 568 aagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtta 627 || ||||| |||||||| ||||||||||| || || ||||| ||||||||||| | || Sbjct: 5171 aaaaactctggcctgaagtactgcttcaattcttctgtcactaagctcttgatgcgattg 5112 Query: 628 tagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctcg 687 || ||| |||| ||||||||| ||| || ||||| || || ||||| || ||||| Sbjct: 5111 taactgctatccttctcatcaaggtcgagatcaaaacctatacgacggccacctttctca 5052 Query: 688 atgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatc 740 || ||||| ||||| ||||| ||||||||||| | ||||||||||||||||| Sbjct: 5051 attacactacttccaacatttgatgtcatgatgagaagtgtgttcttgaaatc 4999
>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence Length = 129513 Score = 168 bits (85), Expect = 2e-38 Identities = 214/257 (83%) Strand = Plus / Plus Query: 481 aacacctctttgagcataatatcagctatctctttcacctccaacttagtcagctgcctg 540 |||||||| || ||||| ||||| |||||||| || ||||||| ||||| || |||||| Sbjct: 36204 aacacctccttcagcattatatctgctatctccttaacctccagtttagtgagttgcctg 36263 Query: 541 aacacaatcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactcc 600 || |||||||| ||||| | || ||||||||||| ||||| || || || |||| ||| Sbjct: 36264 aaaacaatcatttcatcaagcctattcaagaactctggcctaaagtattgtttcagctct 36323 Query: 601 tcggtcaccaagctcttgatcctgttatagctggtatctttctcatcagagtcaaggtca 660 |||||||||||||||||||| |||||||| ||| | || ||||||||| ||||||||||| Sbjct: 36324 tcggtcaccaagctcttgattctgttataactgctgtccttctcatcatagtcaaggtca 36383 Query: 661 aacccaatcttccggcctcccttctcgatgacactgcttccgacattcgatgtcatgatc 720 || || || |||||||| |||||||| ||||||||||| ||||| |||||||| || Sbjct: 36384 aatcctatgcgacggcctcctttctcgatcacactgcttccaacatttgatgtcattata 36443 Query: 721 aacagtgtgttcttgaa 737 | |||||||||||||| Sbjct: 36444 agaagtgtgttcttgaa 36460 Score = 46.1 bits (23), Expect = 0.17 Identities = 83/103 (80%) Strand = Plus / Plus Query: 328 agcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctg 387 |||||||| || || | |||||| |||||||| | ||| || || |||| ||||||||| Sbjct: 36051 agcatcttttcagccatgctgtcctccaaaagtcgcattatggctcgtcttagaggcctg 36110 Query: 388 gcaccatagcttgggttgtaaccctcgtcgacaactctatccc 430 || ||||| || || || ||||| |||||||| ||||| |||| Sbjct: 36111 gccccataactaggattataaccttcgtcgaccactctctccc 36153
>gb|M32603.1|TOMCD4A Tomato ATP-dependent protease (CD4A) gene, complete cds Length = 5429 Score = 159 bits (80), Expect = 2e-35 Identities = 368/464 (79%) Strand = Plus / Minus Query: 274 ccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagcatc 333 ||||||||||||||||| ||||| | ||||||||||| |||| ||| || || |||||| Sbjct: 5239 ccatctgaatccacatccacaattactgaatcaccttctttgatctcacctgcaagcatc 5180 Query: 334 ttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcacca 393 ||||| || | || || || | || ||||||||||| | | || || || || ||| Sbjct: 5179 ttctcggccatactatcctctagcagtctcataatagctctcctcaatggtctagctcca 5120 Query: 394 tagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacctggagg 453 ||||||||||| || || || || || || ||||| | ||| ||||||| || ||||| Sbjct: 5119 tagcttgggttatatccttcatcaactaccctatctctaaacctctctgtcacttggagt 5060 Query: 454 tctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagctatctct 513 ||||| ||||| ||| | ||| |||| ||||| || ||||| ||||| || ||||| Sbjct: 5059 tctatctccttattcttcaacctcacaaagacctccttaagcatgatatcggcaatctcc 5000 Query: 514 ttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaagaac 573 ||||||||||||||||| ||||| | ||| |||||||||||| ||||||||| || ||| Sbjct: 4999 ttcacctccaacttagtgagctgacggaatacaatcatctcactcaatctgtttaaaaac 4940 Query: 574 tcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagctg 633 || |||||||| ||||| ||||||||||| ||||||||||||||||| | ||| || || Sbjct: 4939 tctggcctgaagtactgtttcaactcctcagtcaccaagctcttgatacggttgtaacta 4880 Query: 634 gtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctcgatgaca 693 |||| ||||| ||| | || || ||||| || || || ||||| ||||| || ||| Sbjct: 4879 ctatccttctcgtcaaaatctagatcaaaacctatacgacgacctcctttctctatcaca 4820 Query: 694 ctgcttccgacattcgatgtcatgatcaacagtgtgttcttgaa 737 |||||||| ||||||||||||||||| | ||||| |||||||| Sbjct: 4819 ctgcttccaacattcgatgtcatgatgaggagtgtattcttgaa 4776
>gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2992 Score = 157 bits (79), Expect = 6e-35 Identities = 325/407 (79%) Strand = Plus / Minus Query: 352 tccaaaagcctcataatagcccgtcgcagaggcctggcaccatagcttgggttgtaaccc 411 |||| ||| ||||||||||||| | || ||| || |||||||| || |||||||| || Sbjct: 2770 tccagaagtctcataatagccctcctcaaaggtctagcaccataactagggttgtagcct 2711 Query: 412 tcgtcgacaactctatcccggaacttctctgttacctggaggtctatttcctttgccttg 471 || || || || ||||| | ||| |||||||||| || || || |||||||| ||| Sbjct: 2710 tcatccaccaccctatctctgaatctctctgttacttgaagctcaatttccttgttcttc 2651 Query: 472 agcctgtcaaacacctctttgagcataatatcagctatctctttcacctccaacttagtc 531 | ||| |||| ||||| || | ||||||||| || || || || ||||||| ||| || Sbjct: 2650 aacctcccaaatacctccttcaacataatatcggcaatttccttgacctccagctttgta 2591 Query: 532 agctgcctgaacacaatcatctcatccaatctgttcaagaactcaggcctgaaatactgc 591 || ||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 2590 agttgcctaaacacaatcatctcatctaatctgttcaagaactcaggcctaaagtactgc 2531 Query: 592 ttcaactcctcggtcaccaagctcttgatcctgttatagctggtatctttctcatcagag 651 || | ||| || ||||| | ||||||||| | ||| || ||| | || ||||||||| || Sbjct: 2530 ttaagctcttcagtcacaaggctcttgatacggttgtaactgctgtccttctcatcatag 2471 Query: 652 tcaaggtcaaacccaatcttccggcctcccttctcgatgacactgcttccgacattcgat 711 || |||||||| || ||| | || || || |||||||| ||||| ||||| ||||| ||| Sbjct: 2470 tctaggtcaaaacctatcctacgcccacctttctcgattacactacttccaacatttgat 2411 Query: 712 gtcatgatcaacagtgtgttcttgaaatcaactgtccgtcccttgct 758 ||||| || | ||||||||||||||||| | |||| ||||||||| Sbjct: 2410 gtcataataagaagtgtgttcttgaaatcggcagtccttcccttgct 2364
>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266, complete sequence Length = 113459 Score = 149 bits (75), Expect = 2e-32 Identities = 372/471 (78%) Strand = Plus / Plus Query: 267 caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 326 |||||||||||| ||||| |||||| ||| |||| ||||| || || | ||| ||||| Sbjct: 112661 caccttaccatcagaatcagcatcaattataacagagtcaccctctttaatctctccagc 112720 Query: 327 cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 386 ||||||||||| || | |||||| ||||| |||| ||| || || |||| |||||||| Sbjct: 112721 aagcatcttctctgccatgctgtcctccaagagccgcattatggctcgtcttagaggcct 112780 Query: 387 ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 446 || ||||| || || | ||||| || || || |||||||||| || ||||||| || Sbjct: 112781 tgccccataactaggatcataaccttcttcaaccactctatccctaaatctctctgtcac 112840 Query: 447 ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 506 || || ||||| || | || || |||||||| ||||| || ||||| |||||||| Sbjct: 112841 tgaaagatcaatttctttggttttcagtctgtcaaatacctccttcagcattatatcagc 112900 Query: 507 tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 566 |||||| |||||||||| ||| || || |||||||| |||||||| || ||||| || || Sbjct: 112901 tatctccttcacctccagctttgtgagttgcctgaaaacaatcatttcgtccaacctatt 112960 Query: 567 caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 626 ||| ||||||||||| || |||||||| | |||||| ||||||||||||||||| | || Sbjct: 112961 caaaaactcaggcctaaagtactgctttagctcctcagtcaccaagctcttgattcgatt 113020 Query: 627 atagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctc 686 ||| | | || ||||||||| | ||||||||||| || || || || ||||| ||||| Sbjct: 113021 ataagagctgtccttctcatcataatcaaggtcaaatcctattttacgtcctcctttctc 113080 Query: 687 gatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaa 737 || || |||||||| || ||||||||||| || | || ||||||||||| Sbjct: 113081 aatcacgctgcttccaacgttcgatgtcattataagaagggtgttcttgaa 113131
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 149 bits (75), Expect = 2e-32 Identities = 372/471 (78%) Strand = Plus / Plus Query: 267 caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 326 |||||||||||| ||||| |||||| ||| |||| ||||| || || | ||| ||||| Sbjct: 63652 caccttaccatcagaatcagcatcaattataacagagtcaccctctttaatctctccagc 63711 Query: 327 cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 386 ||||||||||| || | |||||| ||||| |||| ||| || || |||| |||||||| Sbjct: 63712 aagcatcttctctgccatgctgtcctccaagagccgcattatggctcgtcttagaggcct 63771 Query: 387 ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 446 || ||||| || || | ||||| || || || |||||||||| || ||||||| || Sbjct: 63772 tgccccataactaggatcataaccttcttcaaccactctatccctaaatctctctgtcac 63831 Query: 447 ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 506 || || ||||| || | || || |||||||| ||||| || ||||| |||||||| Sbjct: 63832 tgaaagatcaatttctttggttttcagtctgtcaaatacctccttcagcattatatcagc 63891 Query: 507 tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 566 |||||| |||||||||| ||| || || |||||||| |||||||| || ||||| || || Sbjct: 63892 tatctccttcacctccagctttgtgagttgcctgaaaacaatcatttcgtccaacctatt 63951 Query: 567 caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 626 ||| ||||||||||| || |||||||| | |||||| ||||||||||||||||| | || Sbjct: 63952 caaaaactcaggcctaaagtactgctttagctcctcagtcaccaagctcttgattcgatt 64011 Query: 627 atagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctc 686 ||| | | || ||||||||| | ||||||||||| || || || || ||||| ||||| Sbjct: 64012 ataagagctgtccttctcatcataatcaaggtcaaatcctattttacgtcctcctttctc 64071 Query: 687 gatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaa 737 || || |||||||| || ||||||||||| || | || ||||||||||| Sbjct: 64072 aatcacgctgcttccaacgttcgatgtcattataagaagggtgttcttgaa 64122
>gb|L09547.1|PEAPCLP Pisum sativum (clone pCLp) nuclear encoded precursor to chloroplast protein mRNA, complete cds Length = 3239 Score = 145 bits (73), Expect = 2e-31 Identities = 214/261 (81%) Strand = Plus / Minus Query: 480 aaacacctctttgagcataatatcagctatctctttcacctccaacttagtcagctgcct 539 ||||||||| |||||||| || || |||||||| ||||| ||||| || || || || || Sbjct: 2547 aaacacctccttgagcattatgtctgctatctccttcacttccaattttgtgagttgtct 2488 Query: 540 gaacacaatcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactc 599 ||| |||||||| |||||||| || ||||| ||||| |||||||| || || || | ||| Sbjct: 2487 gaaaacaatcatttcatccaacctattcaaaaactctggcctgaagtattgttttagctc 2428 Query: 600 ctcggtcaccaagctcttgatcctgttatagctggtatctttctcatcagagtcaaggtc 659 ||| ||||||||||||||||| || ||||| ||| ||||||||||||| | || | || Sbjct: 2427 ctcagtcaccaagctcttgattctattataactgctatctttctcatcgtaatccaaatc 2368 Query: 660 aaacccaatcttccggcctcccttctcgatgacactgcttccgacattcgatgtcatgat 719 ||| ||||| |||||||| ||||| || ||||||||||| ||||| |||||||| || Sbjct: 2367 aaatccaattcggcggcctcctttctcaatcacactgcttccaacatttgatgtcattat 2308 Query: 720 caacagtgtgttcttgaaatc 740 | ||||||||||||||||| Sbjct: 2307 aagaagtgtgttcttgaaatc 2287 Score = 42.1 bits (21), Expect = 2.6 Identities = 84/105 (80%) Strand = Plus / Minus Query: 255 gttgagaaccaccaccttaccatctgaatccacatcaacaatagcagaatcaccttcctt 314 ||||||||| | ||| |||||||| ||||| ||||| || || |||||||||| || || Sbjct: 2772 gttgagaacaatcactttaccatcagaatcaacatccactatgacagaatcaccctcttt 2713 Query: 315 gacctcgccagccagcatcttctccgcgaggctgtcttccaaaag 359 || ||| | || ||||||||||| || | ||| || |||||||| Sbjct: 2712 gatctctctggcgagcatcttctcagccatgctatcctccaaaag 2668
>ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPase/ DNA binding / nuclease/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT3G48870 (ATCLPC) mRNA, complete cds Length = 3130 Score = 107 bits (54), Expect = 5e-20 Identities = 150/182 (82%) Strand = Plus / Minus Query: 487 tctttgagcataatatcagctatctctttcacctccaacttagtcagctgcctgaacaca 546 ||||| ||||| |||||||| ||||| || || |||| ||| || | ||| ||||| ||| Sbjct: 2664 tctttaagcattatatcagcaatctccttgacttccagctttgttaactgtctgaaaaca 2605 Query: 547 atcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactcctcggtc 606 ||||||||||| || |||||||||||||| || ||||||||||| || | ||||| ||| Sbjct: 2604 atcatctcatctaacctgttcaagaactctggtctgaaatactgttttagttcctcagtc 2545 Query: 607 accaagctcttgatcctgttatagctggtatctttctcatcagagtcaaggtcaaaccca 666 || ||||||||||| ||||| || ||| | |||||||| || |||||| ||||||||| Sbjct: 2544 actaagctcttgattctgttgtaactgctgtctttctcgtcgtggtcaagatcaaaccca 2485 Query: 667 at 668 || Sbjct: 2484 at 2483
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18 Length = 82912 Score = 107 bits (54), Expect = 5e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 487 tctttgagcataatatcagctatctctttcacctccaacttagtcagctgcctgaacaca 546 ||||| ||||| |||||||| ||||| || || |||| ||| || | ||| ||||| ||| Sbjct: 71103 tctttaagcattatatcagcaatctccttgacttccagctttgttaactgtctgaaaaca 71162 Query: 547 atcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactcctcggtc 606 ||||||||||| || |||||||||||||| || ||||||||||| || | ||||| ||| Sbjct: 71163 atcatctcatctaacctgttcaagaactctggtctgaaatactgttttagttcctcagtc 71222 Query: 607 accaagctcttgatcctgttatagctggtatctttctcatcagagtcaaggtcaaaccca 666 || ||||||||||| ||||| || ||| | |||||||| || |||||| ||||||||| Sbjct: 71223 actaagctcttgattctgttgtaactgctgtctttctcgtcgtggtcaagatcaaaccca 71282 Query: 667 at 668 || Sbjct: 71283 at 71284
>gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds Length = 3105 Score = 107 bits (54), Expect = 5e-20 Identities = 150/182 (82%) Strand = Plus / Minus Query: 487 tctttgagcataatatcagctatctctttcacctccaacttagtcagctgcctgaacaca 546 ||||| ||||| |||||||| ||||| || || |||| ||| || | ||| ||||| ||| Sbjct: 2665 tctttaagcattatatcagcaatctccttgacttccagctttgttaactgtctgaaaaca 2606 Query: 547 atcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactcctcggtc 606 ||||||||||| || |||||||||||||| || ||||||||||| || | ||||| ||| Sbjct: 2605 atcatctcatctaacctgttcaagaactctggtctgaaatactgttttagttcctcagtc 2546 Query: 607 accaagctcttgatcctgttatagctggtatctttctcatcagagtcaaggtcaaaccca 666 || ||||||||||| ||||| || ||| | |||||||| || |||||| ||||||||| Sbjct: 2545 actaagctcttgattctgttgtaactgctgtctttctcgtcgtggtcaagatcaaaccca 2486 Query: 667 at 668 || Sbjct: 2485 at 2484
>dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds Length = 3090 Score = 107 bits (54), Expect = 5e-20 Identities = 150/182 (82%) Strand = Plus / Minus Query: 487 tctttgagcataatatcagctatctctttcacctccaacttagtcagctgcctgaacaca 546 ||||| ||||| |||||||| ||||| || || |||| ||| || | ||| ||||| ||| Sbjct: 2649 tctttaagcattatatcagcaatctccttgacttccagctttgttaactgtctgaaaaca 2590 Query: 547 atcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactcctcggtc 606 ||||||||||| || |||||||||||||| || ||||||||||| || | ||||| ||| Sbjct: 2589 atcatctcatctaacctgttcaagaactctggtctgaaatactgttttagttcctcagtc 2530 Query: 607 accaagctcttgatcctgttatagctggtatctttctcatcagagtcaaggtcaaaccca 666 || ||||||||||| ||||| || ||| | |||||||| || |||||| ||||||||| Sbjct: 2529 actaagctcttgattctgttgtaactgctgtctttctcgtcgtggtcaagatcaaaccca 2470 Query: 667 at 668 || Sbjct: 2469 at 2468
>emb|X75328.1|BNCLPA B.napus (Topas) clpA mRNA Length = 2837 Score = 95.6 bits (48), Expect = 2e-16 Identities = 167/206 (81%), Gaps = 3/206 (1%) Strand = Plus / Minus Query: 514 ttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaagaac 573 ||||| |||||||| || ||||| ||||||| ||||||||| || | ||||| | |||| Sbjct: 2305 ttcacttccaacttcgttagctgtctgaacagaatcatctcgtcaagcctgttgaggaac 2246 Query: 574 tcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagctg 633 || || ||||| ||||| |||||||||| |||||| | ||||||||| ||||| |||||| Sbjct: 2245 tccggtctgaagtactgtttcaactcctgggtcacaaggctcttgattctgttgtagctg 2186 Query: 634 gtatctttctcatcagagtcaaggtcaaacccaatcttccggcctcccttctcgatgaca 693 | |||||||| | |||| ||||| || ||||| | ||||| ||||| || ||| Sbjct: 2185 ctgtctttctcgt---agtccaggtcgaaaccaatgcgtcttcctcctttctcaatcaca 2129 Query: 694 ctgcttccgacattcgatgtcatgat 719 |||||||||||||| ||||||||||| Sbjct: 2128 ctgcttccgacatttgatgtcatgat 2103
>gb|AF053562.1|AF053562 Mesembryanthemum crystallinum ATP-dependent protease mRNA, partial cds Length = 531 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 274 ccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagcatc 333 ||||||||||| ||||| |||||| | ||||| || || |||| || | || |||||| Sbjct: 158 ccatctgaatcaacatccacaataaccgaatcgccctctttgatttctcgggcgagcatc 99 Query: 334 ttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcacca 393 ||||| || | |||||| |||| ||| ||||||||||||| | |||||||| |||||| Sbjct: 98 ttctcggccatgctgtcctccagaagtctcataatagccctcctcagaggccgagcacca 39 Query: 394 tagcttgggttgtaaccctcgtcgacaactctatc 428 ||||| |||||||||||||| || || |||||||| Sbjct: 38 tagctggggttgtaaccctcatccaccactctatc 4
>gb|AF022909.1| Arabidopsis thaliana ClpC mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2912 Score = 73.8 bits (37), Expect = 7e-10 Identities = 193/245 (78%) Strand = Plus / Minus Query: 502 tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 561 ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || | Sbjct: 2583 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 2524 Query: 562 ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 621 ||||| | |||||| || |||||||| || |||| |||||| || || | ||||||||| Sbjct: 2523 ctgtttaggaactcgggtctgaaatattgtttcagctcctctgttacaaggctcttgatt 2464 Query: 622 ctgttatagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctccc 681 ||||| || ||| | |||||||| || |||| | ||| || || || | ||||| Sbjct: 2463 ctgttgtaactgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcct 2404 Query: 682 ttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatca 741 ||||| || || ||||||||||| || ||||||||||| | |||||||| ||||| ||| Sbjct: 2403 ttctcaatcacgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtca 2344 Query: 742 actgt 746 ||||| Sbjct: 2343 actgt 2339
>ref|NM_124471.2| Arabidopsis thaliana CLPC; ATP binding / ATPase AT5G50920 (CLPC) mRNA, complete cds Length = 3183 Score = 65.9 bits (33), Expect = 2e-07 Identities = 192/245 (78%) Strand = Plus / Minus Query: 502 tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 561 ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || | Sbjct: 2635 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 2576 Query: 562 ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 621 ||||| | |||||| || ||||| || || |||| |||||| || || | ||||||||| Sbjct: 2575 ctgtttaggaactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgatt 2516 Query: 622 ctgttatagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctccc 681 ||||| || ||| | |||||||| || |||| | ||| || || || | ||||| Sbjct: 2515 ctgttgtaactgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcct 2456 Query: 682 ttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatca 741 ||||| || || ||||||||||| || ||||||||||| | |||||||| ||||| ||| Sbjct: 2455 ttctcaatcacgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtca 2396 Query: 742 actgt 746 ||||| Sbjct: 2395 actgt 2391
>gb|AY102125.1| Arabidopsis thaliana AT5g50920/K3K7_7 mRNA, complete cds Length = 3125 Score = 65.9 bits (33), Expect = 2e-07 Identities = 192/245 (78%) Strand = Plus / Minus Query: 502 tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 561 ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || | Sbjct: 2610 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 2551 Query: 562 ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 621 ||||| | |||||| || ||||| || || |||| |||||| || || | ||||||||| Sbjct: 2550 ctgtttaggaactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgatt 2491 Query: 622 ctgttatagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctccc 681 ||||| || ||| | |||||||| || |||| | ||| || || || | ||||| Sbjct: 2490 ctgttgtaactgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcct 2431 Query: 682 ttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatca 741 ||||| || || ||||||||||| || ||||||||||| | |||||||| ||||| ||| Sbjct: 2430 ttctcaatcacgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtca 2371 Query: 742 actgt 746 ||||| Sbjct: 2370 actgt 2366
>dbj|AK220924.1| Arabidopsis thaliana mRNA for ATP-dependent Clp protease, ATP-binding subunit, complete cds, clone: RAFL22-49-P06 Length = 774 Score = 65.9 bits (33), Expect = 2e-07 Identities = 192/245 (78%) Strand = Plus / Minus Query: 502 tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 561 ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || | Sbjct: 267 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 208 Query: 562 ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 621 ||||| | |||||| || ||||| || || |||| |||||| || || | ||||||||| Sbjct: 207 ctgtttaggaactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgatt 148 Query: 622 ctgttatagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctccc 681 ||||| || ||| | |||||||| || |||| | ||| || || || | ||||| Sbjct: 147 ctgttgtaactgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcct 88 Query: 682 ttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatca 741 ||||| || || ||||||||||| || ||||||||||| | |||||||| ||||| ||| Sbjct: 87 ttctcaatcacgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtca 28 Query: 742 actgt 746 ||||| Sbjct: 27 actgt 23
>emb|BX830850.1|CNS0A0O2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZG04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1161 Score = 65.9 bits (33), Expect = 2e-07 Identities = 192/245 (78%) Strand = Plus / Minus Query: 502 tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 561 ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || | Sbjct: 681 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 622 Query: 562 ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 621 ||||| | |||||| || ||||| || || |||| |||||| || || | ||||||||| Sbjct: 621 ctgtttaggaactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgatt 562 Query: 622 ctgttatagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctccc 681 ||||| || ||| | |||||||| || |||| | ||| || || || | ||||| Sbjct: 561 ctgttgtaactgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcct 502 Query: 682 ttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatca 741 ||||| || || ||||||||||| || ||||||||||| | |||||||| ||||| ||| Sbjct: 501 ttctcaatcacgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtca 442 Query: 742 actgt 746 ||||| Sbjct: 441 actgt 437
>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7 Length = 68726 Score = 65.9 bits (33), Expect = 2e-07 Identities = 192/245 (78%) Strand = Plus / Plus Query: 502 tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 561 ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || | Sbjct: 18509 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 18568 Query: 562 ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 621 ||||| | |||||| || ||||| || || |||| |||||| || || | ||||||||| Sbjct: 18569 ctgtttaggaactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgatt 18628 Query: 622 ctgttatagctggtatctttctcatcagagtcaaggtcaaacccaatcttccggcctccc 681 ||||| || ||| | |||||||| || |||| | ||| || || || | ||||| Sbjct: 18629 ctgttgtaactgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcct 18688 Query: 682 ttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaatca 741 ||||| || || ||||||||||| || ||||||||||| | |||||||| ||||| ||| Sbjct: 18689 ttctcaatcacgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtca 18748 Query: 742 actgt 746 ||||| Sbjct: 18749 actgt 18753
>gb|AC138005.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0038O16, complete sequence Length = 37350 Score = 48.1 bits (24), Expect = 0.043 Identities = 66/80 (82%) Strand = Plus / Plus Query: 679 cccttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaa 738 |||||||||||||| | ||| ||||| || ||||||||||| | || | |||||||||| Sbjct: 6305 cccttctcgatgacgccgctgccgacgttggatgtcatgatgatgagcgagttcttgaaa 6364 Query: 739 tcaactgtccgtcccttgct 758 || || |||| |||||||| Sbjct: 6365 tccaccgtcctccccttgct 6384
>gb|AC138002.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0011I07 map S10207, complete sequence Length = 123847 Score = 48.1 bits (24), Expect = 0.043 Identities = 66/80 (82%) Strand = Plus / Plus Query: 679 cccttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaa 738 |||||||||||||| | ||| ||||| || ||||||||||| | || | |||||||||| Sbjct: 103689 cccttctcgatgacgccgctgccgacgttggatgtcatgatgatgagcgagttcttgaaa 103748 Query: 739 tcaactgtccgtcccttgct 758 || || |||| |||||||| Sbjct: 103749 tccaccgtcctccccttgct 103768
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.043 Identities = 66/80 (82%) Strand = Plus / Plus Query: 679 cccttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaa 738 |||||||||||||| | ||| ||||| || ||||||||||| | || | |||||||||| Sbjct: 9095115 cccttctcgatgacgccgctgccgacgttggatgtcatgatgatgagcgagttcttgaaa 9095174 Query: 739 tcaactgtccgtcccttgct 758 || || |||| |||||||| Sbjct: 9095175 tccaccgtcctccccttgct 9095194 Score = 46.1 bits (23), Expect = 0.17 Identities = 47/55 (85%) Strand = Plus / Plus Query: 301 gaatcaccttccttgacctcgccagccagcatcttctccgcgaggctgtcttcca 355 ||||| ||||| ||||||| || || |||||||||||||||||| |||| |||| Sbjct: 9198083 gaatccccttctctgacctctccggcgagcatcttctccgcgagggtgtcctcca 9198137
>dbj|AK100126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008I20, full insert sequence Length = 3229 Score = 48.1 bits (24), Expect = 0.043 Identities = 66/80 (82%) Strand = Plus / Minus Query: 679 cccttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaa 738 |||||||||||||| | ||| ||||| || ||||||||||| | || | |||||||||| Sbjct: 2491 cccttctcgatgacgccgctgccgacgttggatgtcatgatgatgagcgagttcttgaaa 2432 Query: 739 tcaactgtccgtcccttgct 758 || || |||| |||||||| Sbjct: 2431 tccaccgtcctccccttgct 2412
>dbj|AK069552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023N03, full insert sequence Length = 3226 Score = 48.1 bits (24), Expect = 0.043 Identities = 66/80 (82%) Strand = Plus / Minus Query: 679 cccttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaa 738 |||||||||||||| | ||| ||||| || ||||||||||| | || | |||||||||| Sbjct: 2483 cccttctcgatgacgccgctgccgacgttggatgtcatgatgatgagcgagttcttgaaa 2424 Query: 739 tcaactgtccgtcccttgct 758 || || |||| |||||||| Sbjct: 2423 tccaccgtcctccccttgct 2404
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.043 Identities = 66/80 (82%) Strand = Plus / Plus Query: 679 cccttctcgatgacactgcttccgacattcgatgtcatgatcaacagtgtgttcttgaaa 738 |||||||||||||| | ||| ||||| || ||||||||||| | || | |||||||||| Sbjct: 9166812 cccttctcgatgacgccgctgccgacgttggatgtcatgatgatgagcgagttcttgaaa 9166871 Query: 739 tcaactgtccgtcccttgct 758 || || |||| |||||||| Sbjct: 9166872 tccaccgtcctccccttgct 9166891 Score = 46.1 bits (23), Expect = 0.17 Identities = 47/55 (85%) Strand = Plus / Plus Query: 301 gaatcaccttccttgacctcgccagccagcatcttctccgcgaggctgtcttcca 355 ||||| ||||| ||||||| || || |||||||||||||||||| |||| |||| Sbjct: 9269780 gaatccccttctctgacctctccggcgagcatcttctccgcgagggtgtcctcca 9269834
>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0010M24, complete sequence Length = 164853 Score = 46.1 bits (23), Expect = 0.17 Identities = 47/55 (85%) Strand = Plus / Minus Query: 301 gaatcaccttccttgacctcgccagccagcatcttctccgcgaggctgtcttcca 355 ||||| ||||| ||||||| || || |||||||||||||||||| |||| |||| Sbjct: 85937 gaatccccttctctgacctctccggcgagcatcttctccgcgagggtgtcctcca 85883
>emb|Z73073.1|SCYGR288W S.cerevisiae chromosome VII reading frame ORF YGR288w Length = 5198 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 542 acacaatcatctcatccaatctg 564 ||||||||||||||||||||||| Sbjct: 3280 acacaatcatctcatccaatctg 3258
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 46.1 bits (23), Expect = 0.17 Identities = 44/51 (86%) Strand = Plus / Plus Query: 706 ttcgatgtcatgatcaacagtgtgttcttgaaatcaactgtccgtcccttg 756 ||||| ||||||||||| || || |||||||| ||||| || ||||||||| Sbjct: 291213 ttcgaggtcatgatcaagagggtattcttgaagtcaacggtacgtcccttg 291263
>emb|Z73074.1|SCYGR289C S.cerevisiae chromosome VII reading frame ORF YGR289c Length = 4568 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 542 acacaatcatctcatccaatctg 564 ||||||||||||||||||||||| Sbjct: 330 acacaatcatctcatccaatctg 308
>emb|X94332.1|SCCHVIIRA S.cerevisiae DNA for fragment from chromosome VII Length = 35400 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 542 acacaatcatctcatccaatctg 564 ||||||||||||||||||||||| Sbjct: 8538 acacaatcatctcatccaatctg 8560
>ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT2G25140 mRNA, complete cds Length = 3223 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Minus Query: 561 tctgttcaagaactcaggcctgaaat 586 |||||||| ||||||||||||||||| Sbjct: 2695 tctgttcatgaactcaggcctgaaat 2670
>ref|XM_976295.1| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik), mRNA Length = 1530 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 460 tcctttgccttgagcctgtcaa 481 |||||||||||||||||||||| Sbjct: 680 tcctttgccttgagcctgtcaa 659
>ref|XM_619904.3| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik), mRNA Length = 2195 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 460 tcctttgccttgagcctgtcaa 481 |||||||||||||||||||||| Sbjct: 1215 tcctttgccttgagcctgtcaa 1194
>ref|XM_915991.2| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik), mRNA Length = 1591 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 460 tcctttgccttgagcctgtcaa 481 |||||||||||||||||||||| Sbjct: 1215 tcctttgccttgagcctgtcaa 1194
>emb|CR352307.11| Zebrafish DNA sequence from clone DKEY-81P21 in linkage group 7, complete sequence Length = 116787 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Plus Query: 575 caggcctgaaatactgcttcaa 596 |||||||||||||||||||||| Sbjct: 79903 caggcctgaaatactgcttcaa 79924
>dbj|AK133299.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932431H17 product:hypothetical Glutamic acid-rich region profile containing protein, full insert sequence Length = 2789 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Minus Query: 460 tcctttgccttgagcctgtcaa 481 |||||||||||||||||||||| Sbjct: 1217 tcctttgccttgagcctgtcaa 1196
>gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds Length = 3223 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Minus Query: 561 tctgttcaagaactcaggcctgaaat 586 |||||||| ||||||||||||||||| Sbjct: 2695 tctgttcatgaactcaggcctgaaat 2670
>gb|AC119873.38| Mus musculus chromosome 3, clone RP24-275F18, complete sequence Length = 183408 Score = 44.1 bits (22), Expect = 0.67 Identities = 22/22 (100%) Strand = Plus / Plus Query: 460 tcctttgccttgagcctgtcaa 481 |||||||||||||||||||||| Sbjct: 102491 tcctttgccttgagcctgtcaa 102512
>gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds Length = 2895 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Minus Query: 561 tctgttcaagaactcaggcctgaaat 586 |||||||| ||||||||||||||||| Sbjct: 2541 tctgttcatgaactcaggcctgaaat 2516
>emb|AL162596.30| Human DNA sequence from clone RP1-13P20 on chromosome 1q21.1-21.3 Contains the SPRL2A gene for small proline rich-like (epidermal differentiation complex) 2A, the LEP1 gene for late envelope protein 1, a novel gene, the MCSP gene for mitochondrial capsule selenoprotein and the IVL gene for involucrin, complete sequence Length = 116067 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 454 tctatttcctttgccttgagcctgt 478 ||||||||||||||||| ||||||| Sbjct: 100119 tctatttcctttgccttcagcctgt 100143
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 550 atctcatccaatctgttcaagaactcaggcctgaaat 586 ||||||||||||||||| || | ||| |||||||||| Sbjct: 170869 atctcatccaatctgtttaacagctctggcctgaaat 170833
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 550 atctcatccaatctgttcaagaactcaggcctgaaat 586 ||||||||||||||||| || | ||| |||||||||| Sbjct: 116365 atctcatccaatctgtttaacagctctggcctgaaat 116329
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 ctcatcagagtcaaggtcaaa 662 ||||||||||||||||||||| Sbjct: 226846 ctcatcagagtcaaggtcaaa 226866
>gb|DQ397597.1| Cenarchaeum symbiosum clone C05G09, complete sequence Length = 38349 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 465 tgccttgagcctgtcaaacacctct 489 |||||||||||||||||||| |||| Sbjct: 5128 tgccttgagcctgtcaaacaactct 5152
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 310 tccttgacctcgccagccagcatcttctccgcgaggc 346 |||||||||||||| ||||| |||| || |||||||| Sbjct: 5516173 tccttgacctcgcccgccaggatctccttcgcgaggc 5516137
>gb|U59738.1|ATU59738 Arabidopsis thaliana ATP sulfurylase (APS3) gene, complete cds Length = 3680 Score = 42.1 bits (21), Expect = 2.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 550 atctcatccaatctgttcaagaactcaggcctgaaat 586 ||||||||||||||||| || | ||| |||||||||| Sbjct: 3611 atctcatccaatctgtttaacagctctggcctgaaat 3647
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 2.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 712 gtcatgatcaacagtgtgttcttgaaatcaactgtccgtcccttg 756 |||||||||||||| || || |||||||| ||||| || |||||| Sbjct: 2466903 gtcatgatcaacagggtatttttgaaatccactgtgcgacccttg 2466947
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 cgtcgcagaggcctggcacca 393 ||||||||||||||||||||| Sbjct: 110923 cgtcgcagaggcctggcacca 110903
>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence Length = 201783 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 ctcatcagagtcaaggtcaaa 662 ||||||||||||||||||||| Sbjct: 98685 ctcatcagagtcaaggtcaaa 98705
>gb|M17917.1|HUMIR3EB1 Human DNA with homology to EBV IR3 repeat, segment 1, clone Hu2 Length = 1400 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 454 tctatttcctttgccttgagcctgt 478 ||||||||||||||||| ||||||| Sbjct: 335 tctatttcctttgccttcagcctgt 359 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,907,231 Number of Sequences: 3902068 Number of extensions: 6907231 Number of successful extensions: 167884 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 167450 Number of HSP's gapped (non-prelim): 413 length of query: 758 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 735 effective length of database: 17,143,297,704 effective search space: 12600323812440 effective search space used: 12600323812440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
