ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags38l02 |
|---|---|
| Clone Library Name | barley_pub |
>SINA5_ARATH (Q8S3N1) Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia| homolog 5) Length = 309 Score = 150 bits (379), Expect(2) = 3e-55 Identities = 67/75 (89%), Positives = 71/75 (94%) Frame = -1 Query: 631 VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPR 452 VF CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE+DARNY+YSLEVG +GRK WEGTPR Sbjct: 189 VFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPR 248 Query: 451 SIRDSHRKVRDSHDG 407 S+RDSHRKVRDSHDG Sbjct: 249 SVRDSHRKVRDSHDG 263 Score = 84.7 bits (208), Expect(2) = 3e-55 Identities = 39/46 (84%), Positives = 43/46 (93%) Frame = -2 Query: 408 GLIIQRNMALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS 271 GLIIQRNMALFFSGG++KELKLRVTGRIWKEQQNPDSG CI ++ S Sbjct: 263 GLIIQRNMALFFSGGDKKELKLRVTGRIWKEQQNPDSGVCITSMCS 308
>SINA4_ARATH (Q9STN8) Ubiquitin ligase SINAT4 (EC 6.3.2.-) (Seven in absentia| homolog 4) Length = 327 Score = 149 bits (376), Expect(2) = 4e-54 Identities = 67/75 (89%), Positives = 71/75 (94%) Frame = -1 Query: 631 VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPR 452 VFHCFGQYFCLHFEAFQLGM PVYMAFLRFMGDE DAR+YSYSLEVG +GRK+ WEGTPR Sbjct: 207 VFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPR 266 Query: 451 SIRDSHRKVRDSHDG 407 SIRDSHRKVRDS+DG Sbjct: 267 SIRDSHRKVRDSNDG 281 Score = 82.4 bits (202), Expect(2) = 4e-54 Identities = 39/46 (84%), Positives = 42/46 (91%) Frame = -2 Query: 408 GLIIQRNMALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS 271 GLIIQRNMALFFSGG+RKELKLRVTG+IWKEQ +PDSG IPNL S Sbjct: 281 GLIIQRNMALFFSGGDRKELKLRVTGKIWKEQHSPDSGLSIPNLSS 326
>SINA3_ARATH (Q84JL3) Ubiquitin ligase SINAT3 (EC 6.3.2.-) (Seven in absentia| homolog 3) Length = 326 Score = 153 bits (386), Expect(2) = 6e-54 Identities = 68/75 (90%), Positives = 72/75 (96%) Frame = -1 Query: 631 VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPR 452 VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE +ARNY+YSLEVG GRK+IWEGTPR Sbjct: 206 VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPR 265 Query: 451 SIRDSHRKVRDSHDG 407 S+RDSHRKVRDSHDG Sbjct: 266 SVRDSHRKVRDSHDG 280 Score = 77.8 bits (190), Expect(2) = 6e-54 Identities = 39/46 (84%), Positives = 40/46 (86%), Gaps = 2/46 (4%) Frame = -2 Query: 408 GLIIQRNMALFFSGGERKELKLRVTGRIWKEQQ--NPDSGACIPNL 277 GLIIQRNMALFFSGG+RKELKLRVTGRIWKEQQ GACIPNL Sbjct: 280 GLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQQSGEGGGACIPNL 325
>SINA2_ARATH (Q9M2P4) Ubiquitin ligase SINAT2 (EC 6.3.2.-) (Seven in absentia| homolog 2) Length = 308 Score = 139 bits (349), Expect(2) = 5e-44 Identities = 62/75 (82%), Positives = 70/75 (93%) Frame = -1 Query: 631 VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPR 452 VF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDEN+A+ +SYSLEVGA+GRK+ W+G PR Sbjct: 203 VFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPR 262 Query: 451 SIRDSHRKVRDSHDG 407 SIRDSHRKVRDS DG Sbjct: 263 SIRDSHRKVRDSQDG 277 Score = 58.9 bits (141), Expect(2) = 5e-44 Identities = 26/32 (81%), Positives = 31/32 (96%) Frame = -2 Query: 408 GLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 313 GLII RN+AL+FSGG+R+ELKLRVTGRIWKE+ Sbjct: 277 GLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308
>SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2.-) (Seven in| absentia homolog 1) Length = 305 Score = 136 bits (343), Expect(2) = 3e-42 Identities = 61/75 (81%), Positives = 69/75 (92%) Frame = -1 Query: 631 VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPR 452 VF+CFG+ FCLHFEAFQLGMAPVYMAFLRFMGDEN+A+ +SYSLEVGA+ RK+ W+G PR Sbjct: 200 VFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPR 259 Query: 451 SIRDSHRKVRDSHDG 407 SIRDSHRKVRDS DG Sbjct: 260 SIRDSHRKVRDSQDG 274 Score = 55.5 bits (132), Expect(2) = 3e-42 Identities = 24/32 (75%), Positives = 30/32 (93%) Frame = -2 Query: 408 GLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 313 GLII RN+AL+FSG +++ELKLRVTGRIWKE+ Sbjct: 274 GLIIPRNLALYFSGSDKEELKLRVTGRIWKEE 305
>SIAH2_BRARE (Q7SYL3) Ubiquitin ligase Siah2 (EC 6.3.2.-) (Seven in absentia| homolog 2-like) (Siah-2) Length = 331 Score = 47.4 bits (111), Expect = 4e-05 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQLGMA-PVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A + +G A N++Y LE+ N R++ WE TPRSI Sbjct: 233 CFGHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSI 292 Query: 445 RD 440 D Sbjct: 293 HD 294
>SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) (hSiah2) Length = 324 Score = 47.4 bits (111), Expect = 4e-05 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQLGMA-PVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A + +G A N++Y LE+ N R++ WE TPRSI Sbjct: 224 CFGHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSI 283 Query: 445 RD 440 D Sbjct: 284 HD 285
>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Xsiah-2) Length = 313 Score = 47.4 bits (111), Expect = 4e-05 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = -1 Query: 625 HCFGQYFCLHFEAFQLGMA-PVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRS 449 +CF +F L E + + A + +G A NY+Y LE+ N R++ WE TPRS Sbjct: 212 YCFNHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENYAYRLELNGNRRRLTWEATPRS 271 Query: 448 IRD 440 I D Sbjct: 272 IHD 274
>SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) Length = 325 Score = 47.4 bits (111), Expect = 4e-05 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQLGMA-PVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A + +G A N++Y LE+ N R++ WE TPRSI Sbjct: 225 CFGHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSI 284 Query: 445 RD 440 D Sbjct: 285 HD 286
>SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) (mSiah2) Length = 325 Score = 47.4 bits (111), Expect = 4e-05 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQLGMA-PVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A + +G A N++Y LE+ N R++ WE TPRSI Sbjct: 225 CFGHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSI 284 Query: 445 RD 440 D Sbjct: 285 HD 286
>SINA_SCHMA (Q86MW9) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| homolog) (SmSINA) Length = 371 Score = 45.4 bits (106), Expect = 1e-04 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 8/90 (8%) Frame = -1 Query: 622 CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIR 443 CFG F L E + ++ A ++ +G A + Y LE+ + R++ WE PRSI Sbjct: 269 CFGHSFMLVLEKQERVPDQIFFALVQLIGTRKQADQFVYRLELNGHRRRLTWEACPRSIH 328 Query: 442 D--------SHRKVRDSHDGPHNPAEHGTL 377 D S V DS+ H+ AE+G L Sbjct: 329 DGVQSAIAVSDCLVFDSNTA-HSFAENGNL 357
>SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 331 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQ-LGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A ++ +G +A N+ Y LE+ N R++ WE PRSI Sbjct: 233 CFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSI 292 Query: 445 RD 440 + Sbjct: 293 HE 294
>SINA_DROVI (P29304) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQ-LGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A ++ +G +A N+ Y LE+ N R++ WE PRSI Sbjct: 216 CFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSI 275 Query: 445 RD 440 + Sbjct: 276 HE 277
>SINA_DROME (P21461) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQ-LGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A ++ +G +A N+ Y LE+ N R++ WE PRSI Sbjct: 216 CFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSI 275 Query: 445 RD 440 + Sbjct: 276 HE 277
>SINA_DROER (P61093) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQ-LGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A ++ +G +A N+ Y LE+ N R++ WE PRSI Sbjct: 216 CFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSI 275 Query: 445 RD 440 + Sbjct: 276 HE 277
>SIAH1_RAT (Q920M9) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) (Siah-1a) Length = 282 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQ-LGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A ++ +G A N++Y LE+ + R++ WE TPRSI Sbjct: 184 CFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSI 243 Query: 445 RD 440 + Sbjct: 244 HE 245
>SIAH1_HUMAN (Q8IUQ4) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) (Siah-1a) Length = 282 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQ-LGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A ++ +G A N++Y LE+ + R++ WE TPRSI Sbjct: 184 CFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSI 243 Query: 445 RD 440 + Sbjct: 244 HE 245
>SIAH1_BRARE (Q7ZVG6) Ubiquitin ligase Siah1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) Length = 282 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQ-LGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A ++ +G A N++Y LE+ + R++ WE TPRSI Sbjct: 184 CFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSI 243 Query: 445 RD 440 + Sbjct: 244 HE 245
>SIA1B_MOUSE (Q06985) Ubiquitin ligase SIAH1B (EC 6.3.2.-) (Seven in absentia| homolog 1b) (Siah1b) (Siah-1b) Length = 282 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQ-LGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A ++ +G A N++Y LE+ + R++ WE TPRSI Sbjct: 184 CFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSI 243 Query: 445 RD 440 + Sbjct: 244 HE 245
>SIA1A_MOUSE (P61092) Ubiquitin ligase SIAH1A (EC 6.3.2.-) (Seven in absentia| homolog 1a) (Siah1a) (Siah-1a) (mSiah-1a) Length = 282 Score = 43.9 bits (102), Expect = 4e-04 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQ-LGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 CFG +F L E + + A ++ +G A N++Y LE+ + R++ WE TPRSI Sbjct: 184 CFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSI 243 Query: 445 RD 440 + Sbjct: 244 HE 245
>SINAL_DROME (Q8T3Y0) Probable ubiquitin ligase sina-like protein CG13030 (EC| 6.3.2.-) Length = 351 Score = 43.1 bits (100), Expect = 7e-04 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = -1 Query: 622 CFGQYFCLHFEAFQLGM-APVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSI 446 C G++F L E LG Y R +G DA + Y++ + A R + W+ PRSI Sbjct: 249 CHGRHFLLSLEKINLGEDCQQYFTACRMIGSMKDAAEFVYNISLEAYNRTLRWQSKPRSI 308 Query: 445 RDS 437 R++ Sbjct: 309 REN 311
>SIA1_CAEEL (Q965X6) Ubiquitin ligase sia-1 (EC 6.3.2.-) (Seven in absentia| homolog 1) Length = 339 Score = 42.7 bits (99), Expect = 9e-04 Identities = 17/42 (40%), Positives = 29/42 (69%) Frame = -1 Query: 565 VYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRD 440 ++ A ++ +G + +A N+ Y LE+ A+ R+M WE TPRSI + Sbjct: 256 MFYAVVQLIGSKKEADNFVYRLELSASRRRMSWEATPRSIHE 297
>SNPC4_MOUSE (Q8BP86) snRNA-activating protein complex subunit 4 (SNAPc subunit 4)| (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) Length = 1333 Score = 30.8 bits (68), Expect = 3.5 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +1 Query: 340 PQFQLFPLPAGEEECHVPLDYEARRGCHALCGDCPGCSGA-CPPISSSCHWHPPRGYSYN 516 PQ Q P G E+ + L ++ A+ GC GA PP+ S +HPP S Sbjct: 1103 PQGQEIPPTPGPEKAALDLSLLSQESEAAIVTWLKGCQGAFVPPLGSRMPYHPPSLCSLR 1162 Query: 517 SL 522 +L Sbjct: 1163 AL 1164
>JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 669 Score = 30.4 bits (67), Expect = 4.5 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = -1 Query: 457 PRSIRDSHRKVRDSHDGPHNP-AEHGTLLLRRGEERAETAGDWPHLEGAAEPRLGSLHP 284 PR++R S RK SHD +P A L RR + R E D L+ AA P +G P Sbjct: 22 PRTLRSSPRKRTTSHDSSISPSAAQSKQLPRRKKPRTELV-DESELDCAACPAVGQPAP 79
>RUNX3_HUMAN (Q13761) Runt-related transcription factor 3 (Core-binding factor,| alpha 3 subunit) (CBF-alpha 3) (Acute myeloid leukemia 2 protein) (Oncogene AML-2) (Polyomavirus enhancer-binding protein 2 alpha C subunit) (PEBP2-alpha C) (PEA2-alpha C) (SL Length = 415 Score = 30.0 bits (66), Expect = 5.9 Identities = 19/82 (23%), Positives = 33/82 (40%) Frame = -1 Query: 550 LRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGPHNPAEHGTLLL 371 LRF+G ++++ ++ V N P + HR ++ + DGP P H L Sbjct: 138 LRFVGRSGRGKSFTLTITVFTN---------PTQVATYHRAIKVTVDGPREPRRHRQKLE 188 Query: 370 RRGEERAETAGDWPHLEGAAEP 305 + + + GD L P Sbjct: 189 DQTKPFPDRFGDLERLRMRVTP 210
>DPOLA_ORYSA (O48653) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1534 Score = 30.0 bits (66), Expect = 5.9 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 2/27 (7%) Frame = +1 Query: 403 EARRGCHALCGDCPGCSGA--CPPISS 477 E RGC L CP CS CPP+SS Sbjct: 1328 ERYRGCEPLRLSCPSCSTTFDCPPVSS 1354
>NICE1_HUMAN (Q9UGL9) Protein NICE-1| Length = 99 Score = 29.6 bits (65), Expect = 7.7 Identities = 26/89 (29%), Positives = 32/89 (35%), Gaps = 3/89 (3%) Frame = +1 Query: 370 GEEECHVPLDYEARRGCHALCGDCPGC---SGACPPISSSCHWHPPRGYSYNSLHRSRRP 540 G C P A + CG GC SG C S+SC P R RR Sbjct: 20 GPAPCPAPAPTPAPASSSSCCGSGRGCCGDSGCCGSSSTSCCCFP---------RRRRRQ 70 Query: 541 *SGGMPCRLAPFRAGRPQNASRNTVRNNG 627 S G C G Q + R+ R++G Sbjct: 71 RSSGCCC-----CGGGSQRSQRSNNRSSG 94
>MS84A_DROME (Q01642) Male-specific sperm protein Mst84Da| Length = 63 Score = 29.6 bits (65), Expect = 7.7 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +1 Query: 415 GCHALCGDCPGCSGACPPISSSCHWHP 495 GC CG C GC C SS C P Sbjct: 35 GCGPCCGPCGGCGPCCGGTSSFCGCGP 61
>COBQ_LISIN (Q92CK0) Cobyric acid synthase| Length = 511 Score = 29.6 bits (65), Expect = 7.7 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 3/89 (3%) Frame = -1 Query: 595 FEAFQLGMAPVYMAFLRFMGDENDA---RNYSYSLEVGANGRKMIWEGTPRSIRDSHRKV 425 + F+ + P A + + DEND E+ N R ++ G + + V Sbjct: 104 YHDFKQTLIPKIQAVYQSLADENDIIVLEGAGSPAEINLNDRDIVNMGMAKMVDAPVVLV 163 Query: 424 RDSHDGPHNPAEHGTLLLRRGEERAETAG 338 D G + +GT++L + EERA G Sbjct: 164 ADIDKGGVFASIYGTIMLLKEEERARLKG 192 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,873,476 Number of Sequences: 219361 Number of extensions: 2025648 Number of successful extensions: 6653 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 6252 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6620 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
