ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags38k20 |
|---|---|
| Clone Library Name | barley_pub |
>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 951 Score = 216 bits (551), Expect = 4e-56 Identities = 108/109 (99%), Positives = 108/109 (99%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 FVLSGRAW NLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY Sbjct: 843 FVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 902 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV Sbjct: 903 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951
>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)| Length = 952 Score = 174 bits (440), Expect = 3e-43 Identities = 87/109 (79%), Positives = 99/109 (90%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 ++LSG+AW NLL NKTAFTTK++YGK EREAQWA AQRTLHGLQ PE + LFN+K+SY Sbjct: 846 YILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATN--LFNEKNSY 903 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 RELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 904 RELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump 5)| Length = 948 Score = 170 bits (431), Expect = 3e-42 Identities = 84/109 (77%), Positives = 97/109 (88%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 +VLSG+AW NLL+NKTAFTTK++YGK EREAQWA AQRTLHGLQ E + +FN+K+SY Sbjct: 842 YVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAE--KNNIFNEKNSY 899 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 ELS+IAEQAKRRAE+ RLRE+NTLKGHVESVVKLKGLDIDTI Q+YTV Sbjct: 900 SELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 948
>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump 6)| Length = 949 Score = 163 bits (412), Expect = 5e-40 Identities = 77/109 (70%), Positives = 97/109 (88%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + LSG+AW N+++N+TAFTTK++YG+GEREAQWA AQRTLHGL+ PE ++F D ++Y Sbjct: 845 YTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPE----SMFEDTATY 900 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 ELSEIAEQAK+RAE+ARLRE++TLKGHVESVVKLKGLDID +NQ+YTV Sbjct: 901 TELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump 9)| Length = 954 Score = 162 bits (409), Expect = 1e-39 Identities = 79/109 (72%), Positives = 96/109 (88%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + LSGRAW N+++NKTAFT+K++YGKGEREAQWA AQRTLHGLQ + + +FNDKS+Y Sbjct: 848 YSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSD--MFNDKSTY 905 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 RELSEIA+QAKRRAE+ARLRE +TLKGHVESVVK KGLDI+ I Q+YT+ Sbjct: 906 RELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump 1)| Length = 948 Score = 159 bits (403), Expect = 5e-39 Identities = 80/109 (73%), Positives = 92/109 (84%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 ++LSG+AW +L N+TAFTTK++YG GEREAQWA AQRTLHGLQ E + +F +K SY Sbjct: 842 YILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVN--IFPEKGSY 899 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 RELSEIAEQAKRRAEIARLREL+TLKGHVESV KLKGLDIDT +YTV Sbjct: 900 RELSEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 948
>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump 8)| Length = 948 Score = 157 bits (398), Expect = 2e-38 Identities = 80/109 (73%), Positives = 92/109 (84%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + L+G+AW N++ KTAFTTK++YGKGEREAQWA AQRTLHGL PE +FND + Sbjct: 846 YALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPE----AMFNDNKN- 900 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 ELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDTI Q+YTV Sbjct: 901 -ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump 2)| Length = 947 Score = 155 bits (393), Expect = 7e-38 Identities = 81/109 (74%), Positives = 93/109 (85%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 ++LSG+AW NL +NKTAFT K++YGK EREAQWA AQRTLHGLQ E + +F +K SY Sbjct: 842 YILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVN--IFPEKGSY 899 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 RELSEIAEQAKRRAEIARLREL+TLKGHVESVVKLKGLDI+T +YTV Sbjct: 900 RELSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-PSHYTV 947
>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3)| Length = 948 Score = 146 bits (369), Expect = 4e-35 Identities = 76/109 (69%), Positives = 90/109 (82%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 ++L+G AW N++ N+TAFTTK+NYG EREAQWA AQRTLHGLQ E A+ + ++ Y Sbjct: 843 YILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETAN--VVPERGGY 900 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 RELSEIA QAKRRAEIARLREL+TLKGHVESVVKLKGLDI+T +YTV Sbjct: 901 RELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIETAG-HYTV 948
>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)| Length = 956 Score = 142 bits (358), Expect = 8e-34 Identities = 68/109 (62%), Positives = 91/109 (83%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + LSG+AW +++ + AFT K+++GK +RE QWA AQRTLHGLQ P+P +F++ +++ Sbjct: 851 YALSGKAWDLVIEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPK---IFSETTNF 907 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKGLDI+TI Q YTV Sbjct: 908 NELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956
>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 956 Score = 142 bits (358), Expect = 8e-34 Identities = 69/109 (63%), Positives = 91/109 (83%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + LSG+AW +L+ + AFT K+++GK RE QWA AQRTLHGLQ P+P +F++ +++ Sbjct: 851 YALSGKAWDLVLEQRIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPK---IFSETTNF 907 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 908 NELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956
>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 957 Score = 140 bits (353), Expect = 3e-33 Identities = 69/109 (63%), Positives = 89/109 (81%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + LSGRAW + + + AFT K+++GK +RE QWA AQRTLHGLQ P+ LF++ +++ Sbjct: 852 YALSGRAWDLVFERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTK---LFSEATNF 908 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKGLDI+TI Q YTV Sbjct: 909 NELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957
>PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)| (Fragment) Length = 704 Score = 140 bits (352), Expect = 4e-33 Identities = 69/109 (63%), Positives = 90/109 (82%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + LSGRAW +L+ + AFT K+++GK +RE QWA AQRTLHGLQ P+ LF++ +++ Sbjct: 599 YALSGRAWDLVLEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDIK---LFSEATNF 655 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 EL+++AE+AKRRAEIAR REL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 656 NELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 704
>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump| 11) Length = 956 Score = 139 bits (351), Expect = 5e-33 Identities = 68/109 (62%), Positives = 90/109 (82%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + LSGRAW +++ + AFT ++++GK +RE QWA AQRTLHGLQAP+ +F +++ + Sbjct: 851 YALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAK---MFPERTHF 907 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 ELS++AE+AKRRAEIARLREL+TLKGHVESVV+LKGLDI+TI Q YTV Sbjct: 908 NELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump 4)| Length = 960 Score = 139 bits (349), Expect = 9e-33 Identities = 68/109 (62%), Positives = 89/109 (81%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + LSGRAW +++ + AFT ++++GK +RE QWA AQRTLHGLQAP+ +F D++ Sbjct: 855 YALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTK---MFTDRTHV 911 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 EL+++AE+AKRRAEIARLREL+TLKGHVESVV+LKGLDI+TI Q YTV Sbjct: 912 SELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)| Length = 961 Score = 107 bits (268), Expect = 2e-23 Identities = 54/110 (49%), Positives = 78/110 (70%), Gaps = 1/110 (0%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + LSG++W +++ +TA T K+N+G+ ER A WAT +RT HGL+ + + +++S Sbjct: 856 YALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQKPVY----ERNSA 911 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIN-QNYTV 299 EL+ +AE+AKRRAEIAR+REL TLKG VES KLKG D++ N NYT+ Sbjct: 912 TELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961
>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump| 10) Length = 947 Score = 72.4 bits (176), Expect = 1e-12 Identities = 44/109 (40%), Positives = 61/109 (55%) Frame = -2 Query: 625 FVLSGRAWXNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSY 446 + LSG AW +L KTAFT K++YGK + +QR S + + S Sbjct: 850 YALSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQR-----------SRSAEELRGSR 898 Query: 445 RELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 299 S IAEQ +RRAEIARL E++++ H+ESV+KLK +D I +TV Sbjct: 899 SRASWIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
>CING_HUMAN (Q9P2M7) Cingulin| Length = 1197 Score = 43.9 bits (102), Expect = 4e-04 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Frame = -2 Query: 538 EAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 368 E Q Q L +Q PEPA L D REL E + K+R E R REL LK Sbjct: 436 ETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALK 495 Query: 367 GHVESVVKLKGLDIDTINQNY 305 G ++ V + +++ + Q Y Sbjct: 496 GALKEEVASRDQEVEHVRQQY 516
>PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| (Fragments) Length = 110 Score = 43.9 bits (102), Expect = 4e-04 Identities = 26/38 (68%), Positives = 27/38 (71%) Frame = -2 Query: 526 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 413 A A +TLHGLQAPE S L NDK ELSEIAEQAK Sbjct: 77 APALKTLHGLQAPESTSLNLPNDK----ELSEIAEQAK 110
>CING_MOUSE (P59242) Cingulin| Length = 1191 Score = 35.8 bits (81), Expect = 0.11 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 3/99 (3%) Frame = -2 Query: 592 LQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 413 LQN +E + EAQ Q L Q+P+ +L D REL E + K Sbjct: 412 LQNMKLLLGQEEGLRHGLEAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGK 471 Query: 412 RRAE---IARLRELNTLKGHVESVVKLKGLDIDTINQNY 305 +R E R REL LKG ++ V +++ + Y Sbjct: 472 QRVEEQLRLRERELTALKGALKEEVASHDQEVEHVRLQY 510
>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein| 5.3) (Ultrahigh sulfur keratin-associated protein 5.3) (Keratin-associated protein 5-9) (Keratin-associated protein 5.9) (UHS KerB-like) Length = 238 Score = 30.8 bits (68), Expect = 3.6 Identities = 22/64 (34%), Positives = 25/64 (39%) Frame = +1 Query: 445 GSCSCR*RVCGKPAQVLEGHGVFSVR*PTVPPSHLCRSSLWW*KQSCSAGGCXRPCHSAQ 624 GSC C C KP G G S C+SS K SCS C +PC S Sbjct: 122 GSCGCSQCSCYKPCCCSSGCG-----------SSCCQSSCC--KPSCSQSSCCKPCCSQS 168 Query: 625 NRMK 636 + K Sbjct: 169 SCCK 172
>ESC1_SCHPO (Q04635) Protein esc1| Length = 413 Score = 30.8 bits (68), Expect = 3.6 Identities = 28/101 (27%), Positives = 44/101 (43%) Frame = -3 Query: 603 GTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSL 424 G++S + P TT++ +HS +PHR L+ T SS+T VS S+ Sbjct: 115 GSSSSYVYSVPPTNSTTSQASAKHSAVPHRSSQFQSTTLTPSTTDSSST---DVSSSDSV 171 Query: 423 SKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTP 301 S SS+++ T+S +TS S+ TP Sbjct: 172 STS---------ASSSNASNTVS-------VTSPASSSATP 196
>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53-binding protein 2) (p53BP2) (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen) Length = 1128 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -2 Query: 526 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 347 AT ++ L L+ + ++ + L EIAE + A+L+++ LKGHVE Sbjct: 150 ATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQE-----AKLKKVRALKGHVEQKR 204 Query: 346 KLKGLDIDTINQ 311 G ++ I Q Sbjct: 205 LSNGKLVEEIEQ 216
>GCM2_MOUSE (O09102) Chorion-specific transcription factor GCMb (Glial cells| missing homolog 2) (GCM motif protein 2) (mGCMb) Length = 504 Score = 30.0 bits (66), Expect = 6.1 Identities = 15/61 (24%), Positives = 28/61 (45%) Frame = -2 Query: 508 LHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLD 329 +H PE S T + R+++ + KRR+E R ++GH+ S L+ + Sbjct: 156 VHDHPRPESKSETEGRRSALKRQMASFYQPQKRRSEEPEARSTQDIRGHLNSTAALEPTE 215 Query: 328 I 326 + Sbjct: 216 L 216
>RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1| Length = 334 Score = 30.0 bits (66), Expect = 6.1 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Frame = -2 Query: 589 QNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYREL-SEIAEQAK 413 + K + + GK R + + RT P P SH+ +++SS+R S ++ + Sbjct: 79 RRKRSRSRSRGRGKPYRVQRSRSKSRTRRSRSRPRPRSHSRSSERSSHRRTRSRSRDRDR 138 Query: 412 RRAEIARLRELNTLKGHVESVVKLKGLDIDTI 317 R+ RE KG + V +K D I Sbjct: 139 RKVRDKEKREKEKDKGKDKEVHSIKRGDSGNI 170
>SMG_DROME (Q23972) Protein Smaug| Length = 999 Score = 30.0 bits (66), Expect = 6.1 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 314 PKLHRVRNLGIGPNNMTSVLERDWNG 237 PK+H V+ G+GPNN ++ + WNG Sbjct: 769 PKMHHVKPAGVGPNN-GNINKPRWNG 793
>ASPP2_MOUSE (Q8CG79) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53BP2) (53BP2) (Fragment) Length = 1088 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -2 Query: 526 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 347 AT ++ L L+ + ++ + L EIAE + A+L+++ LKGHVE Sbjct: 110 ATKEQRLKFLKQQDQRQQQQAAEQEKLKRLREIAESQE-----AKLKKVRALKGHVEQKR 164 Query: 346 KLKGLDIDTINQ 311 G ++ I Q Sbjct: 165 LSNGKLVEEIEQ 176
>TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)| Length = 1197 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -1 Query: 356 VRGEAQGP*HRHHQPKLH-----RVRNLGIGPNNMTSVLERDWNGAP 231 V GE QGP H L R R G+GP + E +WN AP Sbjct: 1112 VPGE-QGPSEEHRTEALRALLSARKRKAGLGPTEEEATGEEEWNSAP 1157
>SBE2_YEAST (P42223) Protein SBE2| Length = 864 Score = 29.6 bits (65), Expect = 7.9 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 17/131 (12%) Frame = -3 Query: 606 PGTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSR---LPTHSSTTRAATVSF 436 PG+ +TR S +T + + +P R++S++ LSR LP S+TT + S Sbjct: 183 PGSILQKTRTASSADKTICSMSTITTCIPSRQNSVSTPKLSRTVGLPGSSNTTNSIAASQ 242 Query: 435 LRSLSKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTP--------------STKTTPC 298 +S+ L+ ++T L P +T TP +T+ TP Sbjct: 243 TSFISENDSPLKHHCMSTATIQEPKLMP------ITKTPYVHSNSTSVILPYKTTQLTPS 296 Query: 297 EEFGHWTKQHD 265 + + +Q+D Sbjct: 297 QRYRLRKEQND 307
>RNH2_SYNP7 (Q31PW0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 215 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -3 Query: 540 GRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 397 GRH G +H A L P H + FLRSL +P +++ L Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214
>RNH2_SYNP6 (Q5N4B8) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 215 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -3 Query: 540 GRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 397 GRH G +H A L P H + FLRSL +P +++ L Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214
>POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1 Length = 2601 Score = 29.6 bits (65), Expect = 7.9 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 1/120 (0%) Frame = -3 Query: 603 GTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSL 424 GT S +R+ S T++ G P R +++ L+ HS + R+A +R+ Sbjct: 1815 GTESRSSRMGSQSSVTSSA--GSVPPAPRRAPAVSAASLAS-SAHSRSVRSAPA--MRAA 1869 Query: 423 SKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTPCEEFGHWTKQHD-IRIGAR 247 S +R GS+ H G S S R + PS+ +TP G Q D +R+ AR Sbjct: 1870 SAGARSVRSAQSGSTGHRAGAFSVAGSVRQPSGPPSSVSTPAAIRGLTRDQFDAVRVRAR 1929
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/75 (26%), Positives = 35/75 (46%) Frame = -2 Query: 571 TTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIAR 392 T KE Y K ++++W + T++ L+ +L S + + E+A ++ A Sbjct: 439 TVKEEYNKTVKQSEWDEMKATVNTLR-------SLNKTMKSQMQRMKDREKASQKEHSAV 491 Query: 391 LRELNTLKGHVESVV 347 EL TLK +E V Sbjct: 492 KTELKTLKDQLEKSV 506 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,488,605 Number of Sequences: 219361 Number of extensions: 1953310 Number of successful extensions: 4846 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4686 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4827 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
