| Clone Name | rbags38k03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039C20, full insert sequence Length = 1079 Score = 353 bits (178), Expect = 4e-94 Identities = 331/382 (86%) Strand = Plus / Minus Query: 242 atgaaagggctttctgcacctcaacggtcacttcctttggtggtttctccgcatgaagat 301 |||| ||||||||||| |||||||| |||||||||||||||||||| || ||||| |||| Sbjct: 819 atgatagggctttctggacctcaacagtcacttcctttggtggtttttcggcatgcagat 760 Query: 302 ttaccaccaacccattcttggagtagtagtcaatcacaggttcagtttgcatatggaaag 361 || | || | || ||||||| |||||||||||||||||| | |||||| | ||||| | Sbjct: 759 ttgcgactatgcccttcttggtgtagtagtcaatcacaggcttagtttgtacgtggaagg 700 Query: 362 cctcaagccttgactttaagaccgcagctgtgtcatctttcctttgaatcaagggctctc 421 | |||||||||||||| || || |||||||||||||||||||||||||| ||||| |||| Sbjct: 699 cttcaagccttgacttcaatactgcagctgtgtcatctttcctttgaattaagggttctc 640 Query: 422 cggtaacatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctac 481 | ||||||||||||| |||||||||||| ||||||||||| || ||||| |||||||||| Sbjct: 639 cagtaacatcatcaagtccaggagtcttaggaggagcaaattttgtatgataagatctac 580 Query: 482 cactcgatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattg 541 |||| |||||||| |||||||| || |||||||||||||||| |||||||||||||||| Sbjct: 579 cacttgatgggtggatccaacgaccggtaattcgttcttccagtattgcatcatcaattg 520 Query: 542 caaagttcaaaaccttgtcaactttagcgccttgccttgccagcatgtcatcgagctttt 601 |||| || | ||||||||||| |||| ||||| | |||| ||| ||||| ||||| | Sbjct: 519 caaaatttagaaccttgtcaatcttagtaccttgtttggccaacatttcatcaagcttct 460 Query: 602 gtgcttgaacaacagttctagg 623 |||||||||||||||||||||| Sbjct: 459 gtgcttgaacaacagttctagg 438
>dbj|AK059754.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B09, full insert sequence Length = 1069 Score = 353 bits (178), Expect = 4e-94 Identities = 331/382 (86%) Strand = Plus / Minus Query: 242 atgaaagggctttctgcacctcaacggtcacttcctttggtggtttctccgcatgaagat 301 |||| ||||||||||| |||||||| |||||||||||||||||||| || ||||| |||| Sbjct: 820 atgatagggctttctggacctcaacagtcacttcctttggtggtttttcggcatgcagat 761 Query: 302 ttaccaccaacccattcttggagtagtagtcaatcacaggttcagtttgcatatggaaag 361 || | || | || ||||||| |||||||||||||||||| | |||||| | ||||| | Sbjct: 760 ttgcgactatgcccttcttggtgtagtagtcaatcacaggcttagtttgtacgtggaagg 701 Query: 362 cctcaagccttgactttaagaccgcagctgtgtcatctttcctttgaatcaagggctctc 421 | |||||||||||||| || || |||||||||||||||||||||||||| ||||| |||| Sbjct: 700 cttcaagccttgacttcaatactgcagctgtgtcatctttcctttgaattaagggttctc 641 Query: 422 cggtaacatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctac 481 | ||||||||||||| |||||||||||| ||||||||||| || ||||| |||||||||| Sbjct: 640 cagtaacatcatcaagtccaggagtcttaggaggagcaaattttgtatgataagatctac 581 Query: 482 cactcgatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattg 541 |||| |||||||| |||||||| || |||||||||||||||| |||||||||||||||| Sbjct: 580 cacttgatgggtggatccaacgaccggtaattcgttcttccagtattgcatcatcaattg 521 Query: 542 caaagttcaaaaccttgtcaactttagcgccttgccttgccagcatgtcatcgagctttt 601 |||| || | ||||||||||| |||| ||||| | |||| ||| ||||| ||||| | Sbjct: 520 caaaatttagaaccttgtcaatcttagtaccttgtttggccaacatttcatcaagcttct 461 Query: 602 gtgcttgaacaacagttctagg 623 |||||||||||||||||||||| Sbjct: 460 gtgcttgaacaacagttctagg 439
>dbj|D10334.1|RICADKA Oryza sativa mRNA for adenylate kinase-a, complete cds Length = 1154 Score = 353 bits (178), Expect = 4e-94 Identities = 331/382 (86%) Strand = Plus / Minus Query: 242 atgaaagggctttctgcacctcaacggtcacttcctttggtggtttctccgcatgaagat 301 |||| ||||||||||| |||||||| |||||||||||||||||||| || ||||| |||| Sbjct: 860 atgatagggctttctggacctcaacagtcacttcctttggtggtttttcggcatgcagat 801 Query: 302 ttaccaccaacccattcttggagtagtagtcaatcacaggttcagtttgcatatggaaag 361 || | || | || ||||||| |||||||||||||||||| | |||||| | ||||| | Sbjct: 800 ttgcgactatgcccttcttggtgtagtagtcaatcacaggcttagtttgtacgtggaagg 741 Query: 362 cctcaagccttgactttaagaccgcagctgtgtcatctttcctttgaatcaagggctctc 421 | |||||||||||||| || || |||||||||||||||||||||||||| ||||| |||| Sbjct: 740 cttcaagccttgacttcaatactgcagctgtgtcatctttcctttgaattaagggttctc 681 Query: 422 cggtaacatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctac 481 | ||||||||||||| |||||||||||| ||||||||||| || ||||| |||||||||| Sbjct: 680 cagtaacatcatcaagtccaggagtcttaggaggagcaaattttgtatgataagatctac 621 Query: 482 cactcgatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattg 541 |||| |||||||| |||||||| || |||||||||||||||| |||||||||||||||| Sbjct: 620 cacttgatgggtggatccaacgaccggtaattcgttcttccagtattgcatcatcaattg 561 Query: 542 caaagttcaaaaccttgtcaactttagcgccttgccttgccagcatgtcatcgagctttt 601 |||| || | ||||||||||| |||| ||||| | |||| ||| ||||| ||||| | Sbjct: 560 caaaatttagaaccttgtcaatcttagtaccttgtttggccaacatttcatcaagcttct 501 Query: 602 gtgcttgaacaacagttctagg 623 |||||||||||||||||||||| Sbjct: 500 gtgcttgaacaacagttctagg 479
>gb|AY109686.1| Zea mays CL35924_2 mRNA sequence Length = 1088 Score = 325 bits (164), Expect = 1e-85 Identities = 329/384 (85%) Strand = Plus / Plus Query: 240 tcatgaaagggctttctgcacctcaacggtcacttcctttggtggtttctccgcatgaag 299 |||||| ||||||||| |||||||| | ||||||||||||||||||||||||||| | || Sbjct: 223 tcatgagagggctttcagcacctcagcagtcacttcctttggtggtttctccgcaggcag 282 Query: 300 atttaccaccaacccattcttggagtagtagtcaatcacaggttcagtttgcatatggaa 359 |||||||||||| || ||||| ||||| || ||||||||||| |||||||| | ||||| Sbjct: 283 atttaccaccaagcccttcttagagtaataatcaatcacaggctcagtttgtttgtggaa 342 Query: 360 agcctcaagccttgactttaagaccgcagctgtgtcatctttcctttgaatcaagggctc 419 || |||||||||||||| || ||| | || |||||||| ||||||||||||| ||||| Sbjct: 343 ggcttcaagccttgacttcaaaacctcggcagtgtcatccctcctttgaatcaatggctc 402 Query: 420 tccggtaacatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatct 479 ||| || |||||||||||||| |||| ||| ||||| ||||| || |||||||||| || Sbjct: 403 tccagttacatcatcaactcctggagactttggaggtgcaaattttgtatggtaagtcct 462 Query: 480 accactcgatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaat 539 |||||| | |||||| ||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 463 accactgggtgggtggatccaacggccagtaatccgttcttccaatatagcatcatcaat 522 Query: 540 tgcaaagttcaaaaccttgtcaactttagcgccttgccttgccagcatgtcatcgagctt 599 ||||||||| | ||||||||||| ||||| |||||| || ||| ||| ||||| ||||| Sbjct: 523 tgcaaagtttaggaccttgtcaacattagcaccttgctttaccaacatctcatcaagctt 582 Query: 600 ttgtgcttgaacaacagttctagg 623 ||||||||| ||||||||||| Sbjct: 583 ctgtgcttgagtgacagttctagg 606
>gb|BT017007.1| Zea mays clone EK07D2310D06.c mRNA sequence Length = 985 Score = 287 bits (145), Expect = 2e-74 Identities = 319/377 (84%) Strand = Plus / Minus Query: 247 agggctttctgcacctcaacggtcacttcctttggtggtttctccgcatgaagatttacc 306 |||||||||||||||||| | ||||||||||| ||||||||||| ||| | || || ||| Sbjct: 749 agggctttctgcacctcagcagtcacttccttcggtggtttctctgcaggcaggttcacc 690 Query: 307 accaacccattcttggagtagtagtcaatcacaggttcagtttgcatatggaaagcctca 366 || || || ||||||||||| || |||||||||||||| ||||| | |||||||| ||| Sbjct: 689 actaagcccttcttggagtaataatcaatcacaggttcggtttgtctgtggaaagcttca 630 Query: 367 agccttgactttaagaccgcagctgtgtcatctttcctttgaatcaagggctctccggta 426 ||||||||||| |||||| |||| ||||||||| ||||||||||||| |||||||| || Sbjct: 629 agccttgacttcaagacctcagcggtgtcatctctcctttgaatcaatggctctccagtt 570 Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 |||||||||||||| |||| ||| ||||| ||||| || | ||||||| |||||||| Sbjct: 569 acatcatcaactcctggagactttggaggtgcaaattttgagtggtaagtcctaccactg 510 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaag 546 | || ||| |||||||| |||||||| ||||||||||| | |||||||||||||||||| Sbjct: 509 gctgagtggatccaacgaccagtaatccgttcttccaatacagcatcatcaattgcaaag 450 Query: 547 ttcaaaaccttgtcaactttagcgccttgccttgccagcatgtcatcgagcttttgtgct 606 |||| || |||||||| || || |||||| |||||| ||| ||||| ||||| |||||| Sbjct: 449 ttcaggactttgtcaacattggcaccttgctttgccaacatctcatcaagcttctgtgct 390 Query: 607 tgaacaacagttctagg 623 ||| ||||||||||| Sbjct: 389 tgagtgacagttctagg 373
>gb|AY106372.1| Zea mays PCO111761 mRNA sequence Length = 1173 Score = 287 bits (145), Expect = 2e-74 Identities = 319/377 (84%) Strand = Plus / Minus Query: 247 agggctttctgcacctcaacggtcacttcctttggtggtttctccgcatgaagatttacc 306 |||||||||||||||||| | ||||||||||| ||||||||||| ||| | || || ||| Sbjct: 868 agggctttctgcacctcagcagtcacttccttcggtggtttctctgcaggcaggttcacc 809 Query: 307 accaacccattcttggagtagtagtcaatcacaggttcagtttgcatatggaaagcctca 366 || || || ||||||||||| || |||||||||||||| ||||| | |||||||| ||| Sbjct: 808 actaagcccttcttggagtaataatcaatcacaggttcggtttgtctgtggaaagcttca 749 Query: 367 agccttgactttaagaccgcagctgtgtcatctttcctttgaatcaagggctctccggta 426 ||||||||||| |||||| |||| ||||||||| ||||||||||||| |||||||| || Sbjct: 748 agccttgacttcaagacctcagcggtgtcatctctcctttgaatcaatggctctccagtt 689 Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 |||||||||||||| |||| ||| ||||| ||||| || | ||||||| |||||||| Sbjct: 688 acatcatcaactcctggagactttggaggtgcaaattttgagtggtaagtcctaccactg 629 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaag 546 | || ||| |||||||| |||||||| ||||||||||| | |||||||||||||||||| Sbjct: 628 gctgagtggatccaacgaccagtaatccgttcttccaatacagcatcatcaattgcaaag 569 Query: 547 ttcaaaaccttgtcaactttagcgccttgccttgccagcatgtcatcgagcttttgtgct 606 |||| || |||||||| || || |||||| |||||| ||| ||||| ||||| |||||| Sbjct: 568 ttcaggactttgtcaacattggcaccttgctttgccaacatctcatcaagcttctgtgct 509 Query: 607 tgaacaacagttctagg 623 ||| ||||||||||| Sbjct: 508 tgagtcacagttctagg 492
>dbj|AK073605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N16, full insert sequence Length = 1059 Score = 198 bits (100), Expect = 2e-47 Identities = 283/344 (82%) Strand = Plus / Minus Query: 271 acttcctttggtggtttctccgcatgaagatttaccaccaacccattcttggagtagtag 330 ||||| || ||||| ||||| ||||||||||| ||||||| | ||||||||||||||| Sbjct: 761 acttctttcggtggcttctcggcatgaagattggccaccaaggccttcttggagtagtag 702 Query: 331 tcaatcacaggttcagtttgcatatggaaagcctcaagccttgactttaagaccgcagct 390 |||||||| ||||||||||| | ||||| || ||||| || ||||| || ||| ||||| Sbjct: 701 tcaatcactggttcagtttgtttgtggaaggcttcaagtctagacttcaaaacctcagct 642 Query: 391 gtgtcatctttcctttgaatcaagggctctccggtaacatcatcaactccaggagtcttc 450 ||||| |||||||||||||| | || ||||| || |||||||||||||||||| ||| Sbjct: 641 gtgtcgtctttcctttgaattagtggttctccagtgacatcatcaactccaggaaccttt 582 Query: 451 ggaggagcaaacttcgtatggtaagatctaccactcgatgggtgtatccaacggccagta 510 ||||| |||||||| || || ||| || ||||| || || || ||||| ||||||||| Sbjct: 581 ggaggtgcaaacttagtgtgataactcctgccactggagggatggatccaccggccagta 522 Query: 511 attcgttcttccaaaattgcatcatcaattgcaaagttcaaaaccttgtcaactttagcg 570 |||| |||||||||||||| ||||||||| |||||||| | |||||| || || || | Sbjct: 521 attctttcttccaaaattgaatcatcaatggcaaagttaagaaccttatcgacctttgta 462 Query: 571 ccttgccttgccagcatgtcatcgagcttttgtgcttgaacaac 614 |||| | || ||||||| ||||| ||||| ||||| |||||||| Sbjct: 461 cctttcttttccagcatttcatcaagcttctgtgcctgaacaac 418
>dbj|D10335.1|RICADKB Oryza sativa mRNA for adenylate kinase-b, complete cds Length = 1085 Score = 198 bits (100), Expect = 2e-47 Identities = 283/344 (82%) Strand = Plus / Minus Query: 271 acttcctttggtggtttctccgcatgaagatttaccaccaacccattcttggagtagtag 330 ||||| || ||||| ||||| ||||||||||| ||||||| | ||||||||||||||| Sbjct: 793 acttctttcggtggcttctcggcatgaagattggccaccaaggccttcttggagtagtag 734 Query: 331 tcaatcacaggttcagtttgcatatggaaagcctcaagccttgactttaagaccgcagct 390 |||||||| ||||||||||| | ||||| || ||||| || ||||| || ||| ||||| Sbjct: 733 tcaatcactggttcagtttgtttgtggaaggcttcaagtctagacttcaaaacctcagct 674 Query: 391 gtgtcatctttcctttgaatcaagggctctccggtaacatcatcaactccaggagtcttc 450 ||||| |||||||||||||| | || ||||| || |||||||||||||||||| ||| Sbjct: 673 gtgtcgtctttcctttgaattagtggttctccagtgacatcatcaactccaggaaccttt 614 Query: 451 ggaggagcaaacttcgtatggtaagatctaccactcgatgggtgtatccaacggccagta 510 ||||| |||||||| || || ||| || ||||| || || || ||||| ||||||||| Sbjct: 613 ggaggtgcaaacttagtgtgataactcctgccactggagggatggatccaccggccagta 554 Query: 511 attcgttcttccaaaattgcatcatcaattgcaaagttcaaaaccttgtcaactttagcg 570 |||| |||||||||||||| ||||||||| |||||||| | |||||| || || || | Sbjct: 553 attctttcttccaaaattgaatcatcaatggcaaagttaagaaccttatcgacctttgta 494 Query: 571 ccttgccttgccagcatgtcatcgagcttttgtgcttgaacaac 614 |||| | || ||||||| ||||| ||||| ||||| |||||||| Sbjct: 493 cctttcttttccagcatttcatcaagcttctgtgcctgaacaac 450
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Minus Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 |||||||||| |||||||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 7477614 acatcatcaagtccaggagtcttaggaggagcaaattttgtatgataagatctaccactt 7477555 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaag 546 |||||||| |||||||| || |||||||||||||||| |||||||||||||||||||| Sbjct: 7477554 gatgggtggatccaacgaccggtaattcgttcttccagtattgcatcatcaattgcaaaa 7477495 Query: 547 ttcaaaaccttgtcaa 562 || | ||||||||||| Sbjct: 7477494 tttagaaccttgtcaa 7477479 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 242 atgaaagggctttctgcacctcaacggtcacttcctttggtggtttctccgcatgaagat 301 |||| ||||||||||| |||||||| |||||||||||||||||||| || ||||| |||| Sbjct: 7479037 atgatagggctttctggacctcaacagtcacttcctttggtggtttttcggcatgcagat 7478978 Query: 302 ttaccaccaacccattcttggagtagtagtcaatcac 338 || | || | || ||||||| ||||||||||||||| Sbjct: 7478977 ttgcgactatgcccttcttggtgtagtagtcaatcac 7478941 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 355 tggaaagcctcaagccttgactttaagaccgcagctgtgtcatctttcctttgaatcaag 414 ||||| || |||||||||||||| || || |||||||||||||||||||||||||| ||| Sbjct: 7478325 tggaaggcttcaagccttgacttcaatactgcagctgtgtcatctttcctttgaattaag 7478266 Query: 415 ggctctccggtaac 428 || ||||| ||||| Sbjct: 7478265 ggttctccagtaac 7478252 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 601 tgtgcttgaacaacagttctagg 623 ||||||||||||||||||||||| Sbjct: 7477320 tgtgcttgaacaacagttctagg 7477298
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Minus Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 |||||||||| |||||||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 7477493 acatcatcaagtccaggagtcttaggaggagcaaattttgtatgataagatctaccactt 7477434 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaag 546 |||||||| |||||||| || |||||||||||||||| |||||||||||||||||||| Sbjct: 7477433 gatgggtggatccaacgaccggtaattcgttcttccagtattgcatcatcaattgcaaaa 7477374 Query: 547 ttcaaaaccttgtcaa 562 || | ||||||||||| Sbjct: 7477373 tttagaaccttgtcaa 7477358 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 242 atgaaagggctttctgcacctcaacggtcacttcctttggtggtttctccgcatgaagat 301 |||| ||||||||||| |||||||| |||||||||||||||||||| || ||||| |||| Sbjct: 7478916 atgatagggctttctggacctcaacagtcacttcctttggtggtttttcggcatgcagat 7478857 Query: 302 ttaccaccaacccattcttggagtagtagtcaatcac 338 || | || | || ||||||| ||||||||||||||| Sbjct: 7478856 ttgcgactatgcccttcttggtgtagtagtcaatcac 7478820 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 355 tggaaagcctcaagccttgactttaagaccgcagctgtgtcatctttcctttgaatcaag 414 ||||| || |||||||||||||| || || |||||||||||||||||||||||||| ||| Sbjct: 7478204 tggaaggcttcaagccttgacttcaatactgcagctgtgtcatctttcctttgaattaag 7478145 Query: 415 ggctctccggtaac 428 || ||||| ||||| Sbjct: 7478144 ggttctccagtaac 7478131 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 601 tgtgcttgaacaacagttctagg 623 ||||||||||||||||||||||| Sbjct: 7477199 tgtgcttgaacaacagttctagg 7477177
>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 98782 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Minus Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 |||||||||| |||||||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 67290 acatcatcaagtccaggagtcttaggaggagcaaattttgtatgataagatctaccactt 67231 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaag 546 |||||||| |||||||| || |||||||||||||||| |||||||||||||||||||| Sbjct: 67230 gatgggtggatccaacgaccggtaattcgttcttccagtattgcatcatcaattgcaaaa 67171 Query: 547 ttcaaaaccttgtcaa 562 || | ||||||||||| Sbjct: 67170 tttagaaccttgtcaa 67155 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 242 atgaaagggctttctgcacctcaacggtcacttcctttggtggtttctccgcatgaagat 301 |||| ||||||||||| |||||||| |||||||||||||||||||| || ||||| |||| Sbjct: 68713 atgatagggctttctggacctcaacagtcacttcctttggtggtttttcggcatgcagat 68654 Query: 302 ttaccaccaacccattcttggagtagtagtcaatcac 338 || | || | || ||||||| ||||||||||||||| Sbjct: 68653 ttgcgactatgcccttcttggtgtagtagtcaatcac 68617 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 355 tggaaagcctcaagccttgactttaagaccgcagctgtgtcatctttcctttgaatcaag 414 ||||| || |||||||||||||| || || |||||||||||||||||||||||||| ||| Sbjct: 68001 tggaaggcttcaagccttgacttcaatactgcagctgtgtcatctttcctttgaattaag 67942 Query: 415 ggctctccggtaac 428 || ||||| ||||| Sbjct: 67941 ggttctccagtaac 67928 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 601 tgtgcttgaacaacagttctagg 623 ||||||||||||||||||||||| Sbjct: 66996 tgtgcttgaacaacagttctagg 66974
>dbj|AB041773.1| Oryza sativa Adk-a gene for adenylate kinase, partial cds Length = 4341 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Minus Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 |||||||||| |||||||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 3483 acatcatcaagtccaggagtcttaggaggagcaaattttgtatgataagatctaccactt 3424 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaag 546 |||||||| |||||||| || |||||||||||||||| |||||||||||||||||||| Sbjct: 3423 gatgggtggatccaacgaccggtaattcgttcttccagtattgcatcatcaattgcaaaa 3364 Query: 547 ttcaaaaccttgtcaa 562 || | ||||||||||| Sbjct: 3363 tttagaaccttgtcaa 3348 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 355 tggaaagcctcaagccttgactttaagaccgcagctgtgtcatctttcctttgaatcaag 414 ||||| || |||||||||||||| || || |||||||||||||||||||||||||| ||| Sbjct: 4199 tggaaggcttcaagccttgacttcaatactgcagctgtgtcatctttcctttgaattaag 4140 Query: 415 ggctctccggtaac 428 || ||||| ||||| Sbjct: 4139 ggttctccagtaac 4126 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 601 tgtgcttgaacaacagttctagg 623 ||||||||||||||||||||||| Sbjct: 3189 tgtgcttgaacaacagttctagg 3167
>ref|NM_125735.2| Arabidopsis thaliana ADK1 (ADENYLATE KINASE 1); ATP binding / adenylate kinase/ nucleotide kinase/ phosphotransferase, phosphate group as acceptor AT5G63400 (ADK1) transcript variant AT5G63400.1 mRNA, complete cds Length = 1061 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Minus Query: 324 gtagtagtcaatcacaggttcagtttgcatatggaaagcctcaagccttgactttaagac 383 |||||| |||||||| |||| |||||| | |||||||| ||||||| ||||||| || Sbjct: 704 gtagtaatcaatcaccggttgagtttgactgtggaaagctgcaagcctcgactttagaac 645 Query: 384 cgcagctgtgtcatctttcctttgaatcaagggctctccggtaacatcatcaactccagg 443 |||| | |||||||| | ||| |||| |||||||| |||| ||||||||||||||| Sbjct: 644 atcagcgttatcatctttacgttggatcagaggctctccagtaatatcatcaactccagg 585 Query: 444 agtcttcggaggagcaaacttcgtatggtaagatctaccactcgatgggtgtatccaacg 503 || || ||||||||||| || || |||||| || |||||||||||||| ||||| || Sbjct: 584 ggttttgggaggagcaaatttggtgtggtaactcctgccactcgatgggtggatccatcg 525 Query: 504 gccagtaattcgttcttccaaaattgcatcatcaattgcaaagttcaaaaccttgtcaa 562 || || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||||| Sbjct: 524 cccggttattctttcctccaagattgcgtcatcaatagcaaagttgagaactttgtcaa 466
>gb|AY735745.1| Arabidopsis thaliana hypothetical protein AT5G63390 mRNA, complete cds Length = 2830 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Minus Query: 324 gtagtagtcaatcacaggttcagtttgcatatggaaagcctcaagccttgactttaagac 383 |||||| |||||||| |||| |||||| | |||||||| ||||||| ||||||| || Sbjct: 675 gtagtaatcaatcaccggttgagtttgactgtggaaagctgcaagcctcgactttagaac 616 Query: 384 cgcagctgtgtcatctttcctttgaatcaagggctctccggtaacatcatcaactccagg 443 |||| | |||||||| | ||| |||| |||||||| |||| ||||||||||||||| Sbjct: 615 atcagcgttatcatctttacgttggatcagaggctctccagtaatatcatcaactccagg 556 Query: 444 agtcttcggaggagcaaacttcgtatggtaagatctaccactcgatgggtgtatccaacg 503 || || ||||||||||| || || |||||| || |||||||||||||| ||||| || Sbjct: 555 ggttttgggaggagcaaatttggtgtggtaactcctgccactcgatgggtggatccatcg 496 Query: 504 gccagtaattcgttcttccaaaattgcatcatcaattgcaaagttcaaaaccttgtcaa 562 || || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||||| Sbjct: 495 cccggttattctttcctccaagattgcgtcatcaatagcaaagttgagaactttgtcaa 437
>gb|AY079340.1| Arabidopsis thaliana putative adenylate kinase (At5g63400) mRNA, complete cds Length = 772 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Minus Query: 324 gtagtagtcaatcacaggttcagtttgcatatggaaagcctcaagccttgactttaagac 383 |||||| |||||||| |||| |||||| | |||||||| ||||||| ||||||| || Sbjct: 657 gtagtaatcaatcaccggttgagtttgactgtggaaagctgcaagcctcgactttagaac 598 Query: 384 cgcagctgtgtcatctttcctttgaatcaagggctctccggtaacatcatcaactccagg 443 |||| | |||||||| | ||| |||| |||||||| |||| ||||||||||||||| Sbjct: 597 atcagcgttatcatctttacgttggatcagaggctctccagtaatatcatcaactccagg 538 Query: 444 agtcttcggaggagcaaacttcgtatggtaagatctaccactcgatgggtgtatccaacg 503 || || ||||||||||| || || |||||| || |||||||||||||| ||||| || Sbjct: 537 ggttttgggaggagcaaatttggtgtggtaactcctgccactcgatgggtggatccatcg 478 Query: 504 gccagtaattcgttcttccaaaattgcatcatcaattgcaaagttcaaaaccttgtcaa 562 || || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||||| Sbjct: 477 cccggttattctttcctccaagattgcgtcatcaatagcaaagttgagaactttgtcaa 419
>gb|AY039945.1| Arabidopsis thaliana putative adenylate kinase (At5g63400) mRNA, complete cds Length = 979 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Minus Query: 324 gtagtagtcaatcacaggttcagtttgcatatggaaagcctcaagccttgactttaagac 383 |||||| |||||||| |||| |||||| | |||||||| ||||||| ||||||| || Sbjct: 671 gtagtaatcaatcaccggttgagtttgactgtggaaagctgcaagcctcgactttagaac 612 Query: 384 cgcagctgtgtcatctttcctttgaatcaagggctctccggtaacatcatcaactccagg 443 |||| | |||||||| | ||| |||| |||||||| |||| ||||||||||||||| Sbjct: 611 atcagcgttatcatctttacgttggatcagaggctctccagtaatatcatcaactccagg 552 Query: 444 agtcttcggaggagcaaacttcgtatggtaagatctaccactcgatgggtgtatccaacg 503 || || ||||||||||| || || |||||| || |||||||||||||| ||||| || Sbjct: 551 ggttttgggaggagcaaatttggtgtggtaactcctgccactcgatgggtggatccatcg 492 Query: 504 gccagtaattcgttcttccaaaattgcatcatcaattgcaaagttcaaaaccttgtcaa 562 || || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||||| Sbjct: 491 cccggttattctttcctccaagattgcgtcatcaatagcaaagttgagaactttgtcaa 433
>emb|BX833277.1|CNS0A0FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 963 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Minus Query: 324 gtagtagtcaatcacaggttcagtttgcatatggaaagcctcaagccttgactttaagac 383 |||||| |||||||| |||| |||||| | |||||||| ||||||| ||||||| || Sbjct: 660 gtagtaatcaatcaccggttgagtttgactgtggaaagctgcaagcctcgactttagaac 601 Query: 384 cgcagctgtgtcatctttcctttgaatcaagggctctccggtaacatcatcaactccagg 443 |||| | |||||||| | ||| |||| |||||||| |||| ||||||||||||||| Sbjct: 600 atcagcgttatcatctttacgttggatcagaggctctccagtaatatcatcaactccagg 541 Query: 444 agtcttcggaggagcaaacttcgtatggtaagatctaccactcgatgggtgtatccaacg 503 || || ||||||||||| || || |||||| || |||||||||||||| ||||| || Sbjct: 540 ggttttgggaggagcaaatttggtgtggtaactcctgccactcgatgggtggatccatcg 481 Query: 504 gccagtaattcgttcttccaaaattgcatcatcaattgcaaagttcaaaaccttgtcaa 562 || || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||||| Sbjct: 480 cccggttattctttcctccaagattgcgtcatcaatagcaaagttgagaactttgtcaa 422
>gb|AY085188.1| Arabidopsis thaliana clone 13667 mRNA, complete sequence Length = 904 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Minus Query: 324 gtagtagtcaatcacaggttcagtttgcatatggaaagcctcaagccttgactttaagac 383 |||||| |||||||| |||| |||||| | |||||||| ||||||| ||||||| || Sbjct: 704 gtagtaatcaatcaccggttgagtttgactgtggaaagctgcaagcctcgactttagaac 645 Query: 384 cgcagctgtgtcatctttcctttgaatcaagggctctccggtaacatcatcaactccagg 443 |||| | |||||||| | ||| |||| |||||||| |||| ||||||||||||||| Sbjct: 644 atcagcgttatcatctttacgttggatcagaggctctccagtaatatcatcaactccagg 585 Query: 444 agtcttcggaggagcaaacttcgtatggtaagatctaccactcgatgggtgtatccaacg 503 || || ||||||||||| || || |||||| || |||||||||||||| ||||| || Sbjct: 584 ggttttgggaggagcaaatttggtgtggtaactcctgccactcgatgggtggatccatcg 525 Query: 504 gccagtaattcgttcttccaaaattgcatcatcaattgcaaagttcaaaaccttgtcaa 562 || || |||| ||| ||||| ||||| |||||||| |||||||| | ||| ||||||| Sbjct: 524 cccggttattctttcctccaagattgcgtcatcaatagcaaagttgagaactttgtcaa 466
>gb|AF082882.1|AF082882 Arabidopsis thaliana adenylate kinase (ADK1) mRNA, complete cds Length = 969 Score = 99.6 bits (50), Expect = 1e-17 Identities = 183/226 (80%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 324 gtagtagtcaatcacaggttcagtttgcatatggaaagcctcaagccttgactttaagac 383 |||||| |||||||| |||| |||||| | |||||||| ||||||| ||||||| || Sbjct: 688 gtagtaatcaatcaccggttgagtttgactgtggaaagctgcaagcctcgactttagaac 629 Query: 384 cgcagctgtgtcatctttcctttgaatcaagggctctccggtaacatcatcaactccagg 443 |||| | |||||||| | ||| |||| |||||||| |||| ||||||||||||||| Sbjct: 628 atcagcgttatcatctttacgttggatcagaggctctccagtaatatcatcaactccagg 569 Query: 444 agtcttcggaggagcaaacttcgtatggtaagatctaccactcgatgggtgtatccaacg 503 || || ||||||||||| || || |||||| || |||||||||||||| ||||| || Sbjct: 568 ggttttgggaggagcaaatttagtgtggtaactcctgccactcgatgggtggatccatcg 509 Query: 504 gccagtaattcgttcttccaaa-attgcatcatcaattgcaaagtt 548 || || |||| ||| |||||| ||||| |||||||| |||||||| Sbjct: 508 cccggttattctttcctccaaagattgcgtcatcaatagcaaagtt 463
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 93.7 bits (47), Expect = 7e-16 Identities = 110/131 (83%) Strand = Plus / Minus Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 |||||||||||||||||| ||| ||||| |||||||| || || ||| || ||||| Sbjct: 139627 acatcatcaactccaggaacctttggaggtgcaaacttagtgtgataactcctgccactg 139568 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaag 546 || || || ||||| ||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 139567 gagggatggatccaccggccagtaattctttcttccaaaattgaatcatcaatggcaaag 139508 Query: 547 ttcaaaacctt 557 || | |||||| Sbjct: 139507 ttaagaacctt 139497 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 271 acttcctttggtggtttctccgcatgaagatttaccaccaacccattcttggagtagtag 330 ||||| || ||||| ||||| ||||||||||| ||||||| | ||||||||||||||| Sbjct: 140714 acttctttcggtggcttctcggcatgaagattggccaccaaggccttcttggagtagtag 140655 Query: 331 tcaatcac 338 |||||||| Sbjct: 140654 tcaatcac 140647 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 340 ggttcagtttgcatatggaaagcctcaagccttgactttaagaccgcagctgtgtcatct 399 ||||||||||| | ||||| || ||||| || ||||| || ||| |||||||||| ||| Sbjct: 140349 ggttcagtttgtttgtggaaggcttcaagtctagacttcaaaacctcagctgtgtcgtct 140290 Query: 400 ttcctttgaat 410 ||||||||||| Sbjct: 140289 ttcctttgaat 140279
>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence Length = 124563 Score = 93.7 bits (47), Expect = 7e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 ||||||||||| |||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct: 64403 acatcatcaaccccagaaaccttgggaggagcaaactttgtatggtaggttctgccactg 64344 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaa 545 |||||||||||||| || ||||||||||| || || | ||||| |||||||||||||| Sbjct: 64343 gatgggtgtatccagcgtccagtaattcgctcctcaaggattgcgtcatcaattgcaaa 64285
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 93.7 bits (47), Expect = 7e-16 Identities = 110/131 (83%) Strand = Plus / Minus Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 |||||||||||||||||| ||| ||||| |||||||| || || ||| || ||||| Sbjct: 11937900 acatcatcaactccaggaacctttggaggtgcaaacttagtgtgataactcctgccactg 11937841 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaag 546 || || || ||||| ||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 11937840 gagggatggatccaccggccagtaattctttcttccaaaattgaatcatcaatggcaaag 11937781 Query: 547 ttcaaaacctt 557 || | |||||| Sbjct: 11937780 ttaagaacctt 11937770 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 271 acttcctttggtggtttctccgcatgaagatttaccaccaacccattcttggagtagtag 330 ||||| || ||||| ||||| ||||||||||| ||||||| | ||||||||||||||| Sbjct: 11938987 acttctttcggtggcttctcggcatgaagattggccaccaaggccttcttggagtagtag 11938928 Query: 331 tcaatcac 338 |||||||| Sbjct: 11938927 tcaatcac 11938920 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 340 ggttcagtttgcatatggaaagcctcaagccttgactttaagaccgcagctgtgtcatct 399 ||||||||||| | ||||| || ||||| || ||||| || ||| |||||||||| ||| Sbjct: 11938622 ggttcagtttgtttgtggaaggcttcaagtctagacttcaaaacctcagctgtgtcgtct 11938563 Query: 400 ttcctttgaat 410 ||||||||||| Sbjct: 11938562 ttcctttgaat 11938552
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 93.7 bits (47), Expect = 7e-16 Identities = 110/131 (83%) Strand = Plus / Minus Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 |||||||||||||||||| ||| ||||| |||||||| || || ||| || ||||| Sbjct: 12016307 acatcatcaactccaggaacctttggaggtgcaaacttagtgtgataactcctgccactg 12016248 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaag 546 || || || ||||| ||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 12016247 gagggatggatccaccggccagtaattctttcttccaaaattgaatcatcaatggcaaag 12016188 Query: 547 ttcaaaacctt 557 || | |||||| Sbjct: 12016187 ttaagaacctt 12016177 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 271 acttcctttggtggtttctccgcatgaagatttaccaccaacccattcttggagtagtag 330 ||||| || ||||| ||||| ||||||||||| ||||||| | ||||||||||||||| Sbjct: 12017394 acttctttcggtggcttctcggcatgaagattggccaccaaggccttcttggagtagtag 12017335 Query: 331 tcaatcac 338 |||||||| Sbjct: 12017334 tcaatcac 12017327 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 340 ggttcagtttgcatatggaaagcctcaagccttgactttaagaccgcagctgtgtcatct 399 ||||||||||| | ||||| || ||||| || ||||| || ||| |||||||||| ||| Sbjct: 12017029 ggttcagtttgtttgtggaaggcttcaagtctagacttcaaaacctcagctgtgtcgtct 12016970 Query: 400 ttcctttgaat 410 ||||||||||| Sbjct: 12016969 ttcctttgaat 12016959
>gb|BT012920.1| Lycopersicon esculentum clone 114083F, mRNA sequence Length = 977 Score = 91.7 bits (46), Expect = 3e-15 Identities = 229/290 (78%) Strand = Plus / Minus Query: 279 tggtggtttctccgcatgaagatttaccaccaacccattcttggagtagtagtcaatcac 338 |||||||||||| ||| ||||||| || || || ||||||| ||||||||||| || Sbjct: 754 tggtggtttctcagcaggaagattcactacattacccttcttggcatagtagtcaatgac 695 Query: 339 aggttcagtttgcatatggaaagcctcaagccttgactttaagaccgcagctgtgtcatc 398 || ||||||||| | ||||| || || ||||||||||| | || | ||| || ||||| Sbjct: 694 cggctcagtttgcctgtggaaggcttctagccttgacttgagaacagaagcagtatcatc 635 Query: 399 tttcctttgaatcaagggctctccggtaacatcatcaactccaggagtcttcggaggagc 458 ||| | ||| ||||| |||||||| || |||||||| | ||||| || ||||| || Sbjct: 634 ttttcgttgtatcaatggctctccagtgacatcatctatcccaggtactttaggaggtgc 575 Query: 459 aaacttcgtatggtaagatctaccactcgatgggtgtatccaacggccagtaattcgttc 518 ||| || |||||||| || | |||||| | |||||| ||||| || || ||||||| || Sbjct: 574 aaattttgtatggtatgaccgaccactagctgggtggatccagcgtccggtaattctctc 515 Query: 519 ttccaaaattgcatcatcaattgcaaagttcaaaaccttgtcaactttag 568 |||||| || ||||||||||| ||||| || | |||||| |||||||||| Sbjct: 514 ttccaagatggcatcatcaatcgcaaaattaagaaccttatcaactttag 465
>dbj|AB007649.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLE2 Length = 58527 Score = 87.7 bits (44), Expect = 4e-14 Identities = 113/136 (83%) Strand = Plus / Plus Query: 427 acatcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactc 486 ||||||||||||||||| || || ||||||||||| || || |||||| || |||||| Sbjct: 5297 acatcatcaactccaggggttttgggaggagcaaatttggtgtggtaactcctgccactc 5356 Query: 487 gatgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaag 546 |||||||| ||||| || || || |||| ||| ||||| ||||| |||||||| |||||| Sbjct: 5357 gatgggtggatccatcgcccggttattctttcctccaagattgcgtcatcaatagcaaag 5416 Query: 547 ttcaaaaccttgtcaa 562 || | ||| ||||||| Sbjct: 5417 ttgagaactttgtcaa 5432
>dbj|D10429.1|RICKN57 Oryza sativa mRNA for adenylate kinase (KN57 gene), partial sequence Length = 387 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 517 tcttccaaaattgcatcatcaattgcaaagttcaaaaccttgtcaactttagcgccttgc 576 ||||||| |||||||||||||||||||| || | ||||||||||| |||| ||||| Sbjct: 387 tcttccagtattgcatcatcaattgcaaaatttagaaccttgtcaatcttagtaccttgt 328 Query: 577 cttgccagcatgtcatcgagcttttgtgcttgaacaacagttctagg 623 | |||| ||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 327 ttggccaacatttcatcaagcttctgtgcttgaacaacagttctagg 281
>ref|NM_001037052.1| Arabidopsis thaliana ADK1 (ADENYLATE KINASE 1); ATP binding / adenylate kinase/ nucleotide kinase AT5G63400 (ADK1) transcript variant AT5G63400.2 mRNA, complete cds Length = 1030 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 429 atcatcaactccaggagtcttcggaggagcaaacttcgtatggtaagatctaccactcga 488 ||||||||||||||| || || ||||||||||| || || |||||| || |||||||| Sbjct: 599 atcatcaactccaggggttttgggaggagcaaatttggtgtggtaactcctgccactcga 540 Query: 489 tgggtgtatccaacggccagtaattcgttcttccaaaattgcatcatcaattgcaaagtt 548 |||||| ||||| || || || |||| ||| ||||| ||||| |||||||| |||||||| Sbjct: 539 tgggtggatccatcgcccggttattctttcctccaagattgcgtcatcaatagcaaagtt 480 Query: 549 caaaaccttgtcaa 562 | ||| ||||||| Sbjct: 479 gagaactttgtcaa 466
>emb|AJ718932.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC12-1-330, cultivar Bright Yellow 2 Length = 262 Score = 69.9 bits (35), Expect = 9e-09 Identities = 132/165 (80%) Strand = Plus / Minus Query: 279 tggtggtttctccgcatgaagatttaccaccaacccattcttggagtagtagtcaatcac 338 |||||||||||| ||| ||||||| || || || ||||||| |||||||||||| || Sbjct: 199 tggtggtttctcggcaggaagattcactacattacccttcttggcgtagtagtcaatgac 140 Query: 339 aggttcagtttgcatatggaaagcctcaagccttgactttaagaccgcagctgtgtcatc 398 || ||||||||| | |||||| | || ||||||||| | | || ||||| || ||||| Sbjct: 139 cggctcagtttgcctgtggaaaccttccagccttgacntnagaacagcagcagtatcatc 80 Query: 399 tttcctttgaatcaagggctctccggtaacatcatcaactccagg 443 ||| | ||| ||||| |||||||| || |||||||| || ||||| Sbjct: 79 tttacgttgtatcaaaggctctccagtgacatcatctaccccagg 35
>emb|AJ276864.1|STU276864 Solanum tuberosum partial adk gene for putative adenylate kinase and ure gene for urease (allelic form 2) Length = 18962 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 271 acttcctttggtggtttctccgcatgaag 299 |||||||||||||||||||| |||||||| Sbjct: 2536 acttcctttggtggtttctcagcatgaag 2508
>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence Length = 186062 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 atgtccatatgtataaaataa 46 ||||||||||||||||||||| Sbjct: 172407 atgtccatatgtataaaataa 172427
>gb|U80441.1| Caenorhabditis elegans cosmid F27C1, complete sequence Length = 37019 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 517 tcttccaaaattgcatcatcaattg 541 |||||||||||| |||||||||||| Sbjct: 16945 tcttccaaaattccatcatcaattg 16921
>ref|NM_059196.1| Caenorhabditis elegans F27C1.1 (F27C1.1) mRNA, complete cds Length = 810 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 517 tcttccaaaattgcatcatcaattg 541 |||||||||||| |||||||||||| Sbjct: 343 tcttccaaaattccatcatcaattg 319
>gb|AC101891.8| Mus musculus chromosome 3, clone RP23-468J10, complete sequence Length = 174044 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 atgtccatatgtataaaataa 46 ||||||||||||||||||||| Sbjct: 151526 atgtccatatgtataaaataa 151506
>ref|XM_368256.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00988.4) partial mRNA Length = 2013 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 catggcaggcagaaaatgtg 142 |||||||||||||||||||| Sbjct: 635 catggcaggcagaaaatgtg 616
>ref|XM_419917.1| PREDICTED: Gallus gallus similar to CUB and Sushi multiple domains 1 (LOC421899), mRNA Length = 10614 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 gtagtcaatcacaggttcagtttg 350 ||||||| |||||||||||||||| Sbjct: 6612 gtagtcattcacaggttcagtttg 6589
>gb|AC100708.10| Mus musculus chromosome 10, clone RP23-169I18, complete sequence Length = 196776 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 ccagtaattcgttcttccaaaatt 528 |||||||||| ||||||||||||| Sbjct: 78876 ccagtaattccttcttccaaaatt 78899
>gb|AC122807.3| Mus musculus BAC clone RP23-297H3 from 8, complete sequence Length = 210372 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 531 atcatcaattgcaaagttcaaaac 554 ||||||||||| |||||||||||| Sbjct: 116532 atcatcaattgtaaagttcaaaac 116555
>emb|AL592427.6| Human DNA sequence from clone RP11-57F5 on chromosome X, complete sequence Length = 140691 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 taaaataatgctcatttgta 58 |||||||||||||||||||| Sbjct: 89333 taaaataatgctcatttgta 89314
>emb|AL355518.20| Human DNA sequence from clone RP11-39C2 on chromosome 6 Contains the gene for a novel protein, complete sequence Length = 129947 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 atgtataaaataatgctcat 53 |||||||||||||||||||| Sbjct: 122280 atgtataaaataatgctcat 122261
>emb|AL034554.8|HS994L9 Human DNA sequence from clone RP5-994L9 on chromosome 20p12.3-13 Contains STS and GSSs, complete sequence Length = 137739 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 atctttcctttgaatcaagg 415 |||||||||||||||||||| Sbjct: 53190 atctttcctttgaatcaagg 53171
>emb|CR391991.7| Zebrafish DNA sequence from clone DKEY-150E11 in linkage group 2, complete sequence Length = 188653 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 attgcatcatcaattgcaaa 545 |||||||||||||||||||| Sbjct: 70972 attgcatcatcaattgcaaa 70991
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 attgcaaagttcaaaacctt 557 |||||||||||||||||||| Sbjct: 339820 attgcaaagttcaaaacctt 339839
>emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence; segment 1/4 Length = 347558 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 caaaattgcatcatcaattg 541 |||||||||||||||||||| Sbjct: 293302 caaaattgcatcatcaattg 293283
>emb|AJ512637.1|MMY512637 Mycoplasma mycoides subsp. mycoides SC partial glpK gene for glycerol kinase and glpF gene for glycerol facilitator factor Length = 2103 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 caaaattgcatcatcaattg 541 |||||||||||||||||||| Sbjct: 341 caaaattgcatcatcaattg 360
>gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's Hospital Oakland Research Institute) complete sequence Length = 215780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 agcttttgtgcttgaacaac 614 |||||||||||||||||||| Sbjct: 142547 agcttttgtgcttgaacaac 142566
>gb|AC131183.4| Mus musculus BAC clone RP23-225A14 from chromosome 12, complete sequence Length = 141293 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 cacaggttcagtttgcatat 355 |||||||||||||||||||| Sbjct: 82628 cacaggttcagtttgcatat 82609
>gb|AC073657.5|AC073657 Homo sapiens chromosome 15 clone RP11-107F6 map 15q14, complete sequence Length = 164272 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 atgtccatatgtataaaata 45 |||||||||||||||||||| Sbjct: 74737 atgtccatatgtataaaata 74756 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 atgtccatatgtataaaata 45 |||||||||||||||||||| Sbjct: 73015 atgtccatatgtataaaata 73034
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 ctccgcatgaagatttaccaccaa 311 ||||| |||||||||||||||||| Sbjct: 2498083 ctccggatgaagatttaccaccaa 2498106
>gb|AC079300.4| Homo sapiens BAC clone RP11-144B9 from 2, complete sequence Length = 113889 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 tgcatcatcaattgcaaagt 547 |||||||||||||||||||| Sbjct: 34811 tgcatcatcaattgcaaagt 34792
>gb|AF335329.1| Kallichroma tethys isopenicillin N synthase (pcbC) and alpha-aminoadipyl-cysteinyl-valine synthetase (pcbAB) genes, complete cds Length = 12905 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 gccagcatgtcatcgagctt 599 |||||||||||||||||||| Sbjct: 4237 gccagcatgtcatcgagctt 4218
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0064G16 Length = 166453 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 ctccgcatgaagatttaccaccaa 311 ||||| |||||||||||||||||| Sbjct: 114004 ctccggatgaagatttaccaccaa 114027
>emb|AL844141.7| Zebrafish DNA sequence from clone DKEY-30K6, complete sequence Length = 257634 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gcaaaacctgtaacaaaatg 109 |||||||||||||||||||| Sbjct: 102800 gcaaaacctgtaacaaaatg 102781
>gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, complete sequence Length = 179735 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cacaggttcagtttgcatat 355 |||||||||||||||||||| Sbjct: 10927 cacaggttcagtttgcatat 10946
>gb|U07203.1|TVU07203 Trichomonas vaginalis hydrogenosomal adenylate kinase proprotein gene, complete cds Length = 959 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ttcttggagtagtagtcaat 335 |||||||||||||||||||| Sbjct: 760 ttcttggagtagtagtcaat 741
>emb|AL928671.6| Zebrafish DNA sequence from clone CH211-39M14, complete sequence Length = 173481 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gcaaaacctgtaacaaaatg 109 |||||||||||||||||||| Sbjct: 62000 gcaaaacctgtaacaaaatg 62019
>emb|AL807397.6| Mouse DNA sequence from clone RP23-176N13 on chromosome 4, complete sequence Length = 193939 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aaaaaggatgtccatatgta 38 |||||||||||||||||||| Sbjct: 96096 aaaaaggatgtccatatgta 96115
>emb|AL671991.5| Mouse DNA sequence from clone RP23-343L7 on chromosome X, complete sequence Length = 211866 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tatgtataaaataatgctca 52 |||||||||||||||||||| Sbjct: 179424 tatgtataaaataatgctca 179405 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,592,047 Number of Sequences: 3902068 Number of extensions: 5592047 Number of successful extensions: 102087 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101793 Number of HSP's gapped (non-prelim): 281 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)