ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38j14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SNSR5_HUMAN (Q8TDD7) Sensory neuron-specific G-protein coupled r... 30 3.8
2MRGX4_HUMAN (Q96LA9) Mas-related G-protein coupled receptor memb... 30 3.8
3SNSR3_HUMAN (Q8TDD9) Sensory neuron-specific G-protein coupled r... 30 4.9
4MRGX1_HUMAN (Q96LB2) Mas-related G-protein coupled receptor memb... 30 4.9

>SNSR5_HUMAN (Q8TDD7) Sensory neuron-specific G-protein coupled receptor 5|
          Length = 322

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = -2

Query: 372 STWCRNRLGSSFCDGSWLIIAGLLCCRSSL----EALCGSRVKP 253
           S+WC     S F   +WLI   ++ C SSL      LCGSR  P
Sbjct: 170 SSWCET---SDFIPVAWLIFLCVVLCVSSLVLLVRILCGSRKMP 210



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>MRGX4_HUMAN (Q96LA9) Mas-related G-protein coupled receptor member X4 (Sensory|
           neuron-specific G-protein coupled receptor 6)
          Length = 322

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = -2

Query: 372 STWCRNRLGSSFCDGSWLIIAGLLCCRSSL----EALCGSRVKP 253
           S+WC     S F   +WLI   ++ C SSL      LCGSR  P
Sbjct: 170 SSWCET---SDFIPVAWLIFLCVVLCVSSLVLLVRILCGSRKMP 210



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>SNSR3_HUMAN (Q8TDD9) Sensory neuron-specific G-protein coupled receptor 3|
          Length = 322

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = -2

Query: 372 STWCRNRLGSSFCDGSWLIIAGLLCCRSSL----EALCGSRVKP 253
           S WC+    S F   +WLI   ++ C SSL      LCGSR  P
Sbjct: 170 SAWCQT---SDFITVAWLIFLCVVLCGSSLVLLIRILCGSRKIP 210



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>MRGX1_HUMAN (Q96LB2) Mas-related G-protein coupled receptor member X1 (Sensory|
           neuron-specific G-protein coupled receptor 4)
          Length = 322

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = -2

Query: 372 STWCRNRLGSSFCDGSWLIIAGLLCCRSSL----EALCGSRVKP 253
           S WC+    S F   +WLI   ++ C SSL      LCGSR  P
Sbjct: 170 SAWCQT---SDFITVAWLIFLCVVLCGSSLVLLIRILCGSRKIP 210


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,327,749
Number of Sequences: 219361
Number of extensions: 1535897
Number of successful extensions: 3206
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3206
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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