ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38j09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
3emb|AL713931.5|CNS07YP8 Oryza sativa chromosome 12, . BAC OSJNBa... 149 1e-32
4emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb... 149 1e-32
5gb|AY110371.1| Zea mays CL3063_1 mRNA sequence 58 4e-05
6gb|AC092936.9| Homo sapiens 12 BAC RP11-286J13 (Roswell Park Can... 44 0.59
7emb|BX294142.1| Pirellula sp. strain 1 complete genome; segment ... 42 2.3
8gb|AC175318.4| Gallus gallus BAC clone CH261-46G16 from chromoso... 42 2.3
9gb|AC158158.6| Mus musculus chromosome 1, clone RP23-10D8, compl... 42 2.3
10gb|AC114594.15| Mus musculus chromosome 1, clone RP23-81J19, com... 42 2.3
11gb|AC120339.18| Mus musculus chromosome 14, clone RP23-126A8, co... 40 9.2
12gb|AE017336.2| Bacillus anthracis str. 'Ames Ancestor' plasmid p... 40 9.2
13gb|AY513402.1| Notocera sp. CPL-2004a cytochrome oxidase subunit... 40 9.2
14ref|XM_457517.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 9.2
15gb|AY606032.1| Oncorhynchus mykiss valosin containing protein mR... 40 9.2
16ref|XM_538213.2| PREDICTED: Canis familiaris olfactory receptor ... 40 9.2
17emb|BX908796.11| Zebrafish DNA sequence from clone CH211-198E20 ... 40 9.2
18ref|XM_643253.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 9.2
19ref|XM_643881.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 9.2
20gb|AF065404.1| Bacillus anthracis virulence plasmid PX01, comple... 40 9.2
21gb|AC145475.1| Pan troglodytes BAC clone RP43-34K7 from 7, compl... 40 9.2
22gb|AC142288.1| Pan troglodytes BAC clone RP43-178D12 from 7, com... 40 9.2
23emb|CR847948.16| Zebrafish DNA sequence from clone CH211-252L12 ... 40 9.2
24emb|BX323859.2| Human DNA sequence from clone WI2-8988G9 on chro... 40 9.2
25emb|AL356154.13| Human DNA sequence from clone RP11-102H24 on ch... 40 9.2
26emb|AL137122.8| Human DNA sequence from clone RP1-119J15 on chro... 40 9.2
27emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 40 9.2
28gb|AC125311.3| Mus musculus BAC clone RP24-325G24 from chromosom... 40 9.2
29gb|AE011190.1| Bacillus anthracis str. A2012 plasmid pXO1, compl... 40 9.2
30gb|AC005686.1|AC005686 Homo sapiens clone GS1-234F24 from 7p14-1... 40 9.2
31gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone... 40 9.2
32gb|AC165368.5| Mus musculus BAC clone RP23-28L24 from chromosome... 40 9.2 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  149 bits (75), Expect = 1e-32
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                            
Query: 282      atcaataatacaaccatccatggagacatggttaagatctataattgaattgcttccagt 341
                ||||| ||||||||||||   ||||||||| || ||||||||||||||||| || ||| |
Sbjct: 19725908 atcaagaatacaaccatcggaggagacatgctttagatctataattgaattactcccact 19725967

                                                                            
Query: 342      gaatccaaacccaaaggttccatcttcataaagccaaatcctcccctctacattcctggt 401
                ||| || ||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |
Sbjct: 19725968 gaacccgaacccaaaggttccatcatcatatagccaaattcttccctccacattcctcat 19726027

                                                                            
Query: 402      atcatcgaagggagctaacagatgaggatgaaccaggtcataacttgaattgatgcacag 461
                |||||| ||||||||| |||||||| |||  || |  |||||||| ||||||||||||| 
Sbjct: 19726028 atcatctaagggagctgacagatgatgatcgacaacatcataactggaattgatgcacaa 19726087

                           
Query: 462      tatccgagaga 472
                 ||||||||||
Sbjct: 19726088 gatccgagaga 19726098



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 101/121 (83%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                            
Query: 553      tcagagaatggtggttcaagaaatgtagcatctgtagtccagaagacagggggagtagcc 612
                |||||||||||| ||||||||||||| | || ||||||||| |||| | |||| | | ||
Sbjct: 19726179 tcagagaatggttgttcaagaaatgttgtatttgtagtccaaaagata-ggggtgaaccc 19726237

                                                                            
Query: 613      tgagttttgtcccctattctcactaactcgtctacaagtcactccaccaatgtcatcata 672
                ||||||||| |||||  | ||||||||| ||| |||||| |  || ||||||||||||||
Sbjct: 19726238 tgagttttgaccccttgtatcactaacttgtcgacaagtgatacctccaatgtcatcata 19726297

                 
Query: 673      g 673
                |
Sbjct: 19726298 g 19726298



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 35       agggtattctagcaacaagtaaatgccagaa 65
                ||||||||||||||||||||| |||||||||
Sbjct: 19725728 agggtattctagcaacaagtacatgccagaa 19725758



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 31       tacaagggtattctagcaacaagtaaatgccagaagggacca 72
                ||||| |||||||||||||||| || |||| |||||||||||
Sbjct: 19725662 tacaaaggtattctagcaacaattacatgctagaagggacca 19725703
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  149 bits (75), Expect = 1e-32
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                            
Query: 282      atcaataatacaaccatccatggagacatggttaagatctataattgaattgcttccagt 341
                ||||| ||||||||||||   ||||||||| || ||||||||||||||||| || ||| |
Sbjct: 19652122 atcaagaatacaaccatcggaggagacatgctttagatctataattgaattactcccact 19652181

                                                                            
Query: 342      gaatccaaacccaaaggttccatcttcataaagccaaatcctcccctctacattcctggt 401
                ||| || ||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |
Sbjct: 19652182 gaacccgaacccaaaggttccatcatcatatagccaaattcttccctccacattcctcat 19652241

                                                                            
Query: 402      atcatcgaagggagctaacagatgaggatgaaccaggtcataacttgaattgatgcacag 461
                |||||| ||||||||| |||||||| |||  || |  |||||||| ||||||||||||| 
Sbjct: 19652242 atcatctaagggagctgacagatgatgatcgacaacatcataactggaattgatgcacaa 19652301

                           
Query: 462      tatccgagaga 472
                 ||||||||||
Sbjct: 19652302 gatccgagaga 19652312



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 101/121 (83%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                            
Query: 553      tcagagaatggtggttcaagaaatgtagcatctgtagtccagaagacagggggagtagcc 612
                |||||||||||| ||||||||||||| | || ||||||||| |||| | |||| | | ||
Sbjct: 19652393 tcagagaatggttgttcaagaaatgttgtatttgtagtccaaaagata-ggggtgaaccc 19652451

                                                                            
Query: 613      tgagttttgtcccctattctcactaactcgtctacaagtcactccaccaatgtcatcata 672
                ||||||||| |||||  | ||||||||| ||| |||||| |  || ||||||||||||||
Sbjct: 19652452 tgagttttgaccccttgtatcactaacttgtcgacaagtgatacctccaatgtcatcata 19652511

                 
Query: 673      g 673
                |
Sbjct: 19652512 g 19652512



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 35       agggtattctagcaacaagtaaatgccagaa 65
                ||||||||||||||||||||| |||||||||
Sbjct: 19651942 agggtattctagcaacaagtacatgccagaa 19651972



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 31       tacaagggtattctagcaacaagtaaatgccagaagggacca 72
                ||||| |||||||||||||||| || |||| |||||||||||
Sbjct: 19651876 tacaaaggtattctagcaacaattacatgctagaagggacca 19651917
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>emb|AL713931.5|CNS07YP8 Oryza sativa chromosome 12, . BAC OSJNBa0035B12 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 161160

 Score =  149 bits (75), Expect = 1e-32
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                        
Query: 282  atcaataatacaaccatccatggagacatggttaagatctataattgaattgcttccagt 341
            ||||| ||||||||||||   ||||||||| || ||||||||||||||||| || ||| |
Sbjct: 2794 atcaagaatacaaccatcggaggagacatgctttagatctataattgaattactcccact 2853

                                                                        
Query: 342  gaatccaaacccaaaggttccatcttcataaagccaaatcctcccctctacattcctggt 401
            ||| || ||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |
Sbjct: 2854 gaacccgaacccaaaggttccatcatcatatagccaaattcttccctccacattcctcat 2913

                                                                        
Query: 402  atcatcgaagggagctaacagatgaggatgaaccaggtcataacttgaattgatgcacag 461
            |||||| ||||||||| |||||||| |||  || |  |||||||| ||||||||||||| 
Sbjct: 2914 atcatctaagggagctgacagatgatgatcgacaacatcataactggaattgatgcacaa 2973

                       
Query: 462  tatccgagaga 472
             ||||||||||
Sbjct: 2974 gatccgagaga 2984



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 101/121 (83%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                        
Query: 553  tcagagaatggtggttcaagaaatgtagcatctgtagtccagaagacagggggagtagcc 612
            |||||||||||| ||||||||||||| | || ||||||||| |||| | |||| | | ||
Sbjct: 3065 tcagagaatggttgttcaagaaatgttgtatttgtagtccaaaagata-ggggtgaaccc 3123

                                                                        
Query: 613  tgagttttgtcccctattctcactaactcgtctacaagtcactccaccaatgtcatcata 672
            ||||||||| |||||  | ||||||||| ||| |||||| |  || ||||||||||||||
Sbjct: 3124 tgagttttgaccccttgtatcactaacttgtcgacaagtgatacctccaatgtcatcata 3183

             
Query: 673  g 673
            |
Sbjct: 3184 g 3184



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 35   agggtattctagcaacaagtaaatgccagaa 65
            ||||||||||||||||||||| |||||||||
Sbjct: 2614 agggtattctagcaacaagtacatgccagaa 2644



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 31   tacaagggtattctagcaacaagtaaatgccagaagggacca 72
            ||||| |||||||||||||||| || |||| |||||||||||
Sbjct: 2548 tacaaaggtattctagcaacaattacatgctagaagggacca 2589
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>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 133659

 Score =  149 bits (75), Expect = 1e-32
 Identities = 162/191 (84%)
 Strand = Plus / Minus

                                                                        
Query: 282  atcaataatacaaccatccatggagacatggttaagatctataattgaattgcttccagt 341
            ||||| ||||||||||||   ||||||||| || ||||||||||||||||| || ||| |
Sbjct: 1085 atcaagaatacaaccatcggaggagacatgctttagatctataattgaattactcccact 1026

                                                                        
Query: 342  gaatccaaacccaaaggttccatcttcataaagccaaatcctcccctctacattcctggt 401
            ||| || ||||||||||||||||| ||||| |||||||| || ||||| ||||||||  |
Sbjct: 1025 gaacccgaacccaaaggttccatcatcatatagccaaattcttccctccacattcctcat 966

                                                                        
Query: 402  atcatcgaagggagctaacagatgaggatgaaccaggtcataacttgaattgatgcacag 461
            |||||| ||||||||| |||||||| |||  || |  |||||||| ||||||||||||| 
Sbjct: 965  atcatctaagggagctgacagatgatgatcgacaacatcataactggaattgatgcacaa 906

                       
Query: 462  tatccgagaga 472
             ||||||||||
Sbjct: 905  gatccgagaga 895



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 101/121 (83%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                       
Query: 553 tcagagaatggtggttcaagaaatgtagcatctgtagtccagaagacagggggagtagcc 612
           |||||||||||| ||||||||||||| | || ||||||||| |||| | |||| | | ||
Sbjct: 814 tcagagaatggttgttcaagaaatgttgtatttgtagtccaaaagata-ggggtgaaccc 756

                                                                       
Query: 613 tgagttttgtcccctattctcactaactcgtctacaagtcactccaccaatgtcatcata 672
           ||||||||| |||||  | ||||||||| ||| |||||| |  || ||||||||||||||
Sbjct: 755 tgagttttgaccccttgtatcactaacttgtcgacaagtgatacctccaatgtcatcata 696

            
Query: 673 g 673
           |
Sbjct: 695 g 695



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 35   agggtattctagcaacaagtaaatgccagaa 65
            ||||||||||||||||||||| |||||||||
Sbjct: 1265 agggtattctagcaacaagtacatgccagaa 1235



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 31   tacaagggtattctagcaacaagtaaatgccagaagggacca 72
            ||||| |||||||||||||||| || |||| |||||||||||
Sbjct: 1331 tacaaaggtattctagcaacaattacatgctagaagggacca 1290
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>gb|AY110371.1| Zea mays CL3063_1 mRNA sequence
          Length = 707

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 80/97 (82%)
 Strand = Plus / Plus

                                                                       
Query: 280 gtatcaataatacaaccatccatggagacatggttaagatctataattgaattgcttcca 339
           ||||||| |||||| ||| ||  |||||||||  | ||||||||||||||||| || |||
Sbjct: 246 gtatcaagaatacagccagccgaggagacatgcctcagatctataattgaattactgcca 305

                                                
Query: 340 gtgaatccaaacccaaaggttccatcttcataaagcc 376
              |||||||| || ||||||||||| ||||| ||||
Sbjct: 306 acaaatccaaaaccgaaggttccatcctcatatagcc 342



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 30  ttacaagggtattctagcaacaagtaaatgccagaagggaccaccattcagtg 82
           ||||||||| ||||||||||||  ||| |||||||||||||||  ||||||||
Sbjct: 78  ttacaagggcattctagcaacagctaagtgccagaagggaccagtattcagtg 130



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 99/122 (81%), Gaps = 2/122 (1%)
 Strand = Plus / Plus

                                                                       
Query: 553 tcagagaatggtggt-tcaagaaatgtagcatctgtagtccagaagacagggggagtagc 611
           ||||||||||||||| ||||||||||||| |||||| ||||      |||| | ||||||
Sbjct: 519 tcagagaatggtggtatcaagaaatgtagtatctgttgtccnnnnnncaggag-agtagc 577

                                                                       
Query: 612 ctgagttttgtcccctattctcactaactcgtctacaagtcactccaccaatgtcatcat 671
           | |||||||| | |    | || |||| ||||| |||||| |||||||||||||||||||
Sbjct: 578 cagagttttggctctgtgtatccctaaatcgtcgacaagttactccaccaatgtcatcat 637

             
Query: 672 ag 673
           ||
Sbjct: 638 ag 639
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>gb|AC092936.9| Homo sapiens 12 BAC RP11-286J13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 217112

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 348    aaacccaaaggttccatcttca 369
              ||||||||||||||||||||||
Sbjct: 210340 aaacccaaaggttccatcttca 210361
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>emb|BX294142.1| Pirellula sp. strain 1 complete genome; segment 10/24
          Length = 294050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 413    gagctaacagatgaggatgaa 433
              |||||||||||||||||||||
Sbjct: 156607 gagctaacagatgaggatgaa 156627
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>gb|AC175318.4| Gallus gallus BAC clone CH261-46G16 from chromosome w, complete sequence
          Length = 205599

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 501    acatgttacaactccaatatg 521
              |||||||||||||||||||||
Sbjct: 164460 acatgttacaactccaatatg 164440
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>gb|AC158158.6| Mus musculus chromosome 1, clone RP23-10D8, complete sequence
          Length = 193479

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 555  agagaatggtggttcaagaaa 575
            |||||||||||||||||||||
Sbjct: 9208 agagaatggtggttcaagaaa 9228
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>gb|AC114594.15| Mus musculus chromosome 1, clone RP23-81J19, complete sequence
          Length = 144466

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 555   agagaatggtggttcaagaaa 575
             |||||||||||||||||||||
Sbjct: 78246 agagaatggtggttcaagaaa 78226
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>gb|AC120339.18| Mus musculus chromosome 14, clone RP23-126A8, complete sequence
          Length = 228458

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   tagcaacaagtacaagacca 126
             ||||||||||||||||||||
Sbjct: 22781 tagcaacaagtacaagacca 22762
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>gb|AE017336.2| Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence
          Length = 181677

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    ttaagatctataattgaatt 332
              ||||||||||||||||||||
Sbjct: 130531 ttaagatctataattgaatt 130550
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>gb|AY513402.1| Notocera sp. CPL-2004a cytochrome oxidase subunit I (COI) gene,
           partial cds; tRNA-Leu gene, complete sequence; and
           cytochrome oxidase subunit II (COII) gene, partial cds;
           mitochondrial
          Length = 1810

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 ttaagatctataattgaatt 332
           ||||||||||||||||||||
Sbjct: 32  ttaagatctataattgaatt 51
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>ref|XM_457517.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B13200g)
           partial mRNA
          Length = 2007

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  gcagtatcaggatacacggt 101
           ||||||||||||||||||||
Sbjct: 923 gcagtatcaggatacacggt 904
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>gb|AY606032.1| Oncorhynchus mykiss valosin containing protein mRNA, complete cds
          Length = 2681

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 651 tcactccaccaatgtcatcatagc 674
           |||| |||||||||||||||||||
Sbjct: 471 tcacaccaccaatgtcatcatagc 448
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>ref|XM_538213.2| PREDICTED: Canis familiaris olfactory receptor (OR16F03), mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 gacatggttaagatctataa 325
           ||||||||||||||||||||
Sbjct: 85  gacatggttaagatctataa 104
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>emb|BX908796.11| Zebrafish DNA sequence from clone CH211-198E20 in linkage group 15,
             complete sequence
          Length = 204627

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   ccaaacccaaaggttccatc 365
             ||||||||||||||||||||
Sbjct: 56663 ccaaacccaaaggttccatc 56682
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>ref|XM_643253.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (472.t00008)
           partial mRNA
          Length = 945

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 tataattgaattgcttccag 340
           ||||||||||||||||||||
Sbjct: 239 tataattgaattgcttccag 220
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>ref|XM_643881.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (361.t00003)
           partial mRNA
          Length = 945

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 tataattgaattgcttccag 340
           ||||||||||||||||||||
Sbjct: 239 tataattgaattgcttccag 220
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>gb|AF065404.1| Bacillus anthracis virulence plasmid PX01, complete sequence
          Length = 181654

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    ttaagatctataattgaatt 332
              ||||||||||||||||||||
Sbjct: 148703 ttaagatctataattgaatt 148684
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>gb|AC145475.1| Pan troglodytes BAC clone RP43-34K7 from 7, complete sequence
          Length = 136914

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 316    agatctataattgaattgcttccagtga 343
              |||| ||||||||| |||||||||||||
Sbjct: 118808 agatttataattgatttgcttccagtga 118781
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>gb|AC142288.1| Pan troglodytes BAC clone RP43-178D12 from 7, complete sequence
          Length = 187294

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 316    agatctataattgaattgcttccagtga 343
              |||| ||||||||| |||||||||||||
Sbjct: 142585 agatttataattgatttgcttccagtga 142612
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>emb|CR847948.16| Zebrafish DNA sequence from clone CH211-252L12 in linkage group 13,
              complete sequence
          Length = 168946

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    catggagacatggttaagat 319
              ||||||||||||||||||||
Sbjct: 153926 catggagacatggttaagat 153907
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>emb|BX323859.2| Human DNA sequence from clone WI2-8988G9 on chromosome X, complete
            sequence
          Length = 11602

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   atttagtaataaagttacaa 35
            ||||||||||||||||||||
Sbjct: 8286 atttagtaataaagttacaa 8305
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>emb|AL356154.13| Human DNA sequence from clone RP11-102H24 on chromosome 10 Contains a
              replication protein A2 32kDa (RPA2) pseudogene, complete
              sequence
          Length = 157722

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 594    gaagacagggggagtagcct 613
              ||||||||||||||||||||
Sbjct: 106830 gaagacagggggagtagcct 106811
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>emb|AL137122.8| Human DNA sequence from clone RP1-119J15 on chromosome 6, complete
             sequence
          Length = 58484

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   agctaacagatgaggatgaa 433
             ||||||||||||||||||||
Sbjct: 50561 agctaacagatgaggatgaa 50580
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>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
               hansenii
          Length = 1349926

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 82      gcagtatcaggatacacggt 101
               ||||||||||||||||||||
Sbjct: 1027850 gcagtatcaggatacacggt 1027869



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 82      gcagtatcaggatacacggt 101
               ||||||||||||||||||||
Sbjct: 1021867 gcagtatcaggatacacggt 1021886
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>gb|AC125311.3| Mus musculus BAC clone RP24-325G24 from chromosome 14, complete
            sequence
          Length = 162530

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  tagcaacaagtacaagacca 126
            ||||||||||||||||||||
Sbjct: 7075 tagcaacaagtacaagacca 7094
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>gb|AE011190.1| Bacillus anthracis str. A2012 plasmid pXO1, complete sequence
          Length = 181677

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    ttaagatctataattgaatt 332
              ||||||||||||||||||||
Sbjct: 130531 ttaagatctataattgaatt 130550
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>gb|AC005686.1|AC005686 Homo sapiens clone GS1-234F24 from 7p14-15, complete sequence
          Length = 141387

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 316    agatctataattgaattgcttccagtga 343
              |||| ||||||||| |||||||||||||
Sbjct: 110670 agatttataattgatttgcttccagtga 110643
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>gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone rp23-327i21, complete
              sequence
          Length = 218889

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    tgcatgccaaaaggacatat 267
              ||||||||||||||||||||
Sbjct: 186261 tgcatgccaaaaggacatat 186242
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>gb|AC165368.5| Mus musculus BAC clone RP23-28L24 from chromosome 1, complete sequence
          Length = 216981

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     agtaataaagttacaagggt 39
              ||||||||||||||||||||
Sbjct: 162716 agtaataaagttacaagggt 162735


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,320,812
Number of Sequences: 3902068
Number of extensions: 5320812
Number of successful extensions: 94986
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94785
Number of HSP's gapped (non-prelim): 192
length of query: 675
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 652
effective length of database: 17,143,297,704
effective search space: 11177430103008
effective search space used: 11177430103008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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