>CT108_HUMAN (Q96KR6) Protein C20orf108|
          Length = 192

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
 Frame = -3

Query: 502 RTDQAKELLGKYGGAYLATSITLSLISFTACYLLINAGVDVQQLLGKIG----IATDETG 335
           ++ Q K++  +YG   ++  I +SLIS    Y+++++GVD+  +L K+G    +   +  
Sbjct: 85  KSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESLVQSKMA 144

Query: 334 GKVGTFALAYAAHKAASPIRFPPTVALTPVVANWIGKI 221
               TF +AYA HK  +P+R   T+   P++  +  K+
Sbjct: 145 AGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFRKV 182

>CT108_MOUSE (Q9D8B6) Protein C20orf108 homolog|
          Length = 190

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
 Frame = -3

Query: 502 RTDQAKELLGKYGGAYLATSITLSLISFTACYLLINAGVDVQQLLGKIG----IATDETG 335
           RT Q K++  +YG   ++  I +SL+S    Y ++++G+D+  +L K+G    +   +  
Sbjct: 83  RTQQLKKVFQEYGAVGVSMHIGISLVSLGIFYTVVSSGIDMSAILLKLGFKESLVQSKMA 142

Query: 334 GKVGTFALAYAAHKAASPIRFPPTVALTPVVANWIGKI 221
               TF +AYA HK  +P+R   T+   P V  +   +
Sbjct: 143 AGTSTFVVAYAIHKLFAPVRISITLVSVPFVVRYFRSV 180

>YBL7_SCHPO (Q9URV4) Hypothetical protein C106.07c in chromosome II|
          Length = 167

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 20/107 (18%)
 Frame = -3

Query: 499 TDQAKELLGKYGGAYLATSITLSLISFTACYLLINA------GVDVQQLLGKI------G 356
           T + KEL  KYG   L   I +S++ F+A ++L+        G     +L  I       
Sbjct: 51  TQRVKELTKKYGWWSLGVYIGISVLDFSASFVLVRTLGAERIGYLEHSILNSIRRYFNWE 110

Query: 355 IATDETGGKVGTF--------ALAYAAHKAASPIRFPPTVALTPVVA 239
           I      G+   +        A AY  HKA    R P T A+ P +A
Sbjct: 111 IPESTASGEPEAYHSSIWTELAFAYGIHKALVVARVPLTAAIVPPLA 157

>SYRC_SCHPO (O74781) Probable arginyl-tRNA synthetase, cytoplasmic (EC|
           6.1.1.19) (Arginine--tRNA ligase) (ArgRS)
          Length = 618

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +2

Query: 2   NLSLIHWDYYGFVLFYKSSKHPKQVGK-IVLSQIHSHYYRTPKLGVMH-NYQQVHIDRSA 175
           +L+LI  D  G  L    SKH K++GK IV  +  +  Y T  +G  +  Y++   D+S 
Sbjct: 323 SLNLIEED--GGALLIDLSKHDKKLGKAIVQKRDGTTLYLTRDIGTAYKRYEKYKFDKSI 380

Query: 176 YTLLLHQSVAFASL 217
           Y +   Q + F+ L
Sbjct: 381 YVVSSQQDMYFSQL 394

>KAPR_BLUGR (Q9HEP7) cAMP-dependent protein kinase regulatory subunit (PKA|
           regulatory subunit)
          Length = 389

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -3

Query: 400 INAGVDVQQLLGKIG--IATDETGGKVGTFALAYAAHKAASPI 278
           +N    VQ  LG +G  +AT E GG  G  AL Y A +AA+ I
Sbjct: 179 VNPAGSVQPGLGGLGNKVATIEPGGSFGELALMYNAPRAATVI 221

>NBEA_DROME (Q9W4E2) Protein neurobeachin (Protein rugose) (A-kinase anchor|
            protein 550) (AKAP 550) (dAKAP550)
          Length = 3584

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +2

Query: 59   KHPKQVGKIVLSQIHSHYYRTPKLG-VMHNYQQVHIDRSAYTLLLHQSVAFASLGDLPYP 235
            +H +Q  +    Q   HYY+  +   V+HN+   H+  + Y    HQ VA       P P
Sbjct: 2010 QHQQQQQQQQQHQQQQHYYQQQQQQQVVHNHSHHHMTAAYYQQQQHQQVAAGQQQHSPTP 2069

Query: 236  VGDH 247
            +  H
Sbjct: 2070 LATH 2073


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,606,710
Number of Sequences: 219361
Number of extensions: 1234398
Number of successful extensions: 3944
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3881
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)