ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags38i22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X99483.1|HVPAL6 H.vulgare mRNA for phenylalanine ammonia-lyase, pal6 Length = 1251 Score = 283 bits (143), Expect = 3e-73 Identities = 231/259 (89%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 204 atcttctcttcatctcattgattagctgatagggaggggctcgccgttccactccttgag 263 |||||||||||||||| ||| ||||| |||||| || |||||||| |||||||||||||| Sbjct: 1077 atcttctcttcatctccttgtttagcagataggcagaggctcgccattccactccttgag 1018 Query: 264 gcactccagcagcgcatcgatgtgcttaccctggttcatggcaacgaacactttgtccac 323 ||| ||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 1017 gcattccagcagcgcgtcgatgtgcttgccctggttcatggcaacaaacaccttgtccac 958 Query: 324 ctcctcgccgggtgaccgagtcttctctccggtcaagtacaccgtgcccagctcctcgcg 383 |||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 957 ctcctccccgggtgaccgtgtcttctctcctgtcaagtacaccgttcccagctcctcgcg 898 Query: 384 cacaaaccggta-cagagggtatgaccggcagtctacgatacggtttggttctgcggcgg 442 ||| |||||||| |||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 897 cacgaaccggtataagagggtacatccggcagtcagtgatacggtttggttctgcggcgg 838 Query: 443 tgccattctccactgcacc 461 | | |||||||| ||||| Sbjct: 837 tccatttctccaccgcacc 819
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 274 bits (138), Expect = 3e-70 Identities = 311/366 (84%), Gaps = 2/366 (0%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 3094 aggggctcgccgttccactccttgaggcactccagcagcgcgtcgatgtgcttgccttgg 3035 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 ||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| |||||| Sbjct: 3034 ttcatggcaacgaacaccttgtccacctcttcgccaggagaccgcgtcttctccccggtc 2975 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggcagtct 417 |||||| |||| || ||||||| |||||| |||||||| || ||||| ||||| || || Sbjct: 2974 aagtactccgttccaagctccttgcgcacgaaccggtagagcgggtacgaccgacattcg 2915 Query: 418 acgatacggtttggttctgcggcggtgccattctccactgcacctctagcagcctcaacc 477 ||||||||||| | | ||| ||||||||||||||||| || | || || ||||| ||| Sbjct: 2914 gcgatacggttttgctgtgctgcggtgccattctccacggcgcttcgggcggcctcgacc 2855 Query: 478 tcctgaggtagtgtagcacagagctcctgctcgaatttggcaaccttgccaaacaccgag 537 |||| || | |||| ||||||||||||||| |||||| |||| |||||||||| Sbjct: 2854 tcctttggcaacactgcacggagctcctgctcgaacatggcaagcttggcaaacaccgac 2795 Query: 538 gtttccacgttgcg-ctcagcctcaccattggccagggcgtgctccaccagcaccgcacg 596 || || ||| |||| ||| |||||||||||||||| |||||||||||| || || ||||| Sbjct: 2794 gtctcgacg-tgcgcctcggcctcaccattggccaaggcgtgctccacgagaactgcacg 2736 Query: 597 catctt 602 |||||| Sbjct: 2735 catctt 2730
>emb|X99725.1|TAPALGEN2 T.aestivum PAL gene, coding region Length = 1419 Score = 266 bits (134), Expect = 8e-68 Identities = 317/378 (83%) Strand = Plus / Minus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggcactccagcagcgcatcgat 284 ||||| || ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1021 ttagcagagaggcaggggctcgccgttccactccttgaggcactcaagcagcgcatcgat 962 Query: 285 gtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagt 344 |||||| ||||||||||||||||||||||| ||||||||||| ||||| || |||| || Sbjct: 961 gtgcttgccctggttcatggcaacgaacaccttgtccacctcttcgccaggagaccccgt 902 Query: 345 cttctctccggtcaagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggta 404 ||||||||||||||||||| |||| || ||||||| |||||| || ||||| || ||||| Sbjct: 901 cttctctccggtcaagtactccgttccaagctccttgcgcacgaatcggtagagtgggta 842 Query: 405 tgaccggcagtctacgatacggtttggttctgcggcggtgccattctccactgcacctct 464 ||||| || || | ||||||||| ||| |||||| |||||||||||||| || | || Sbjct: 841 cgaccgacattcgtcaatacggttttgttgtgcggcagtgccattctccacggcgctcct 782 Query: 465 agcagcctcaacctcctgaggtagtgtagcacagagctcctgctcgaatttggcaacctt 524 |||||||| ||||||| || || || | ||||||||||||||| |||||| ||| Sbjct: 781 ggcagcctcgacctccttcggcagcactgcccgaagctcctgctcgaatgtggcaagctt 722 Query: 525 gccaaacaccgaggtttccacgttgcgctcagcctcaccattggccagggcgtgctccac 584 | ||||| || || ||||||| ||||| ||||||||||| |||| ||| |||||||| Sbjct: 721 cgcgaacactgacgtctccacgtcacgctcggcctcaccatttgccaaggcatgctccac 662 Query: 585 cagcaccgcacgcatctt 602 || || ||||||||||| Sbjct: 661 aagaactgcacgcatctt 644
>gb|L11883.1|WHTWALI4A Triticum aestivum phenylalanine ammonia-lyase (wali4) mRNA, 3' end, partial cds Length = 634 Score = 218 bits (110), Expect = 2e-53 Identities = 200/230 (86%) Strand = Plus / Minus Query: 231 gatagggaggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgctt 290 |||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 383 gataggtaggggctcgccgttccactccttgagacactccagcagcgcgtcgatgtgctt 324 Query: 291 accctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctc 350 ||||||||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| Sbjct: 323 gccctggttcatggcaacgaacaccttgtccacctcttcgccaggagaccgcgtcttctc 264 Query: 351 tccggtcaagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccg 410 |||||||||||| | || || ||||||| |||||| |||||||| || ||||| ||||| Sbjct: 263 cccggtcaagtactctgttccaagctccttgcgcacgaaccggtagagcgggtacgaccg 204 Query: 411 gcagtctacgatacggtttggttctgcggcggtgccattctccactgcac 460 || || ||||||||||| | | || || |||||||||||||| |||| Sbjct: 203 acaatcggcgatacggttttgctgtgttgcagtgccattctccacggcac 154 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 493 gcacagagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgc 552 |||| ||||||||||||||| |||||| |||| |||||||||| || ||||||| |||| Sbjct: 121 gcacggagctcctgctcgaacatggcaagcttggcaaacaccgacgtctccacgtcgcgc 62 Query: 553 tcagcctcaccattggccagggcgtgctccaccagcaccgcacgcatctt 602 || |||||||||||||||| |||||||||||| || || ||||||||||| Sbjct: 61 tcggcctcaccattggccaaggcgtgctccacaagaactgcacgcatctt 12
>ref|XM_473196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2145 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 241 ggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttc 300 ||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 2129 ggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgcttgccctggttc 2070 Query: 301 atggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaag 360 ||||| |||||||| |||| ||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 2069 atggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctccccggtcaag 2010 Query: 361 tacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgacc 409 ||| | || || ||||||||||| || |||||||| || ||||| |||| Sbjct: 2009 tactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacc 1961 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | || |||||| | ||||||||||| || ||||||||||| || Sbjct: 1872 gagctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgc 1813 Query: 558 ctcaccattggccagggcgtgctc 581 ||| || |||||||| |||||||| Sbjct: 1812 ctcgccgttggccagcgcgtgctc 1789
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Plus Query: 241 ggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttc 300 ||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 118228 ggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgcttgccctggttc 118287 Query: 301 atggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaag 360 ||||| |||||||| |||| ||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 118288 atggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctccccggtcaag 118347 Query: 361 tacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgacc 409 ||| | || || ||||||||||| || |||||||| || ||||| |||| Sbjct: 118348 tactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacc 118396 Score = 67.9 bits (34), Expect = 4e-08 Identities = 132/162 (81%), Gaps = 2/162 (1%) Strand = Plus / Plus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || |||||| |||| | || | Sbjct: 98039 aggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagcttgcgctcg 98098 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgac-cgagtcttctctccggt 356 | ||||| | |||||| |||| |||||||||||| ||| ||| |||||||||||| Sbjct: 98099 ctgatggccaggaacaccttgttgcactcctcgccgggggacttgag-cttctctccggt 98157 Query: 357 caagtacaccgtgcccagctcctcgcgcacaaaccggtacag 398 | |||||| ||| ||||||||||| || || |||||||| Sbjct: 98158 gaggtacacgcagccgagctcctcgcggacgaagcggtacag 98199 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | || |||||| | ||||||||||| || ||||||||||| || Sbjct: 118485 gagctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgc 118544 Query: 558 ctcaccattggccagggcgtgctc 581 ||| || |||||||| |||||||| Sbjct: 118545 ctcgccgttggccagcgcgtgctc 118568
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Plus Query: 241 ggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttc 300 ||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 25900818 ggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgcttgccctggttc 25900877 Query: 301 atggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaag 360 ||||| |||||||| |||| ||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 25900878 atggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctccccggtcaag 25900937 Query: 361 tacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgacc 409 ||| | || || ||||||||||| || |||||||| || ||||| |||| Sbjct: 25900938 tactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacc 25900986 Score = 67.9 bits (34), Expect = 4e-08 Identities = 132/162 (81%), Gaps = 2/162 (1%) Strand = Plus / Plus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || |||||| |||| | || | Sbjct: 25880629 aggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagcttgcgctcg 25880688 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgac-cgagtcttctctccggt 356 | ||||| | |||||| |||| |||||||||||| ||| ||| |||||||||||| Sbjct: 25880689 ctgatggccaggaacaccttgttgcactcctcgccgggggacttgag-cttctctccggt 25880747 Query: 357 caagtacaccgtgcccagctcctcgcgcacaaaccggtacag 398 | |||||| ||| ||||||||||| || || |||||||| Sbjct: 25880748 gaggtacacgcagccgagctcctcgcggacgaagcggtacag 25880789 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | || |||||| | ||||||||||| || ||||||||||| || Sbjct: 25901075 gagctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgc 25901134 Query: 558 ctcaccattggccagggcgtgctc 581 ||| || |||||||| |||||||| Sbjct: 25901135 ctcgccgttggccagcgcgtgctc 25901158
>dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118I15, full insert sequence Length = 2551 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 241 ggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttc 300 ||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 2254 ggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgcttgccctggttc 2195 Query: 301 atggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaag 360 ||||| |||||||| |||| ||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 2194 atggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctccccggtcaag 2135 Query: 361 tacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgacc 409 ||| | || || ||||||||||| || |||||||| || ||||| |||| Sbjct: 2134 tactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacc 2086 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | || |||||| | ||||||||||| || ||||||||||| || Sbjct: 1997 gagctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgc 1938 Query: 558 ctcaccattggccagggcgtgctc 581 ||| || |||||||| |||||||| Sbjct: 1937 ctcgccgttggccagcgcgtgctc 1914
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Plus Query: 241 ggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttc 300 ||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 27080 ggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgcttgccctggttc 27139 Query: 301 atggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaag 360 ||||| |||||||| |||| ||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 27140 atggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctccccggtcaag 27199 Query: 361 tacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgacc 409 ||| | || || ||||||||||| || |||||||| || ||||| |||| Sbjct: 27200 tactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacc 27248 Score = 67.9 bits (34), Expect = 4e-08 Identities = 132/162 (81%), Gaps = 2/162 (1%) Strand = Plus / Plus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || |||||| |||| | || | Sbjct: 6891 aggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagcttgcgctcg 6950 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgac-cgagtcttctctccggt 356 | ||||| | |||||| |||| |||||||||||| ||| ||| |||||||||||| Sbjct: 6951 ctgatggccaggaacaccttgttgcactcctcgccgggggacttgag-cttctctccggt 7009 Query: 357 caagtacaccgtgcccagctcctcgcgcacaaaccggtacag 398 | |||||| ||| ||||||||||| || || |||||||| Sbjct: 7010 gaggtacacgcagccgagctcctcgcggacgaagcggtacag 7051 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | || |||||| | ||||||||||| || ||||||||||| || Sbjct: 27337 gagctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgc 27396 Query: 558 ctcaccattggccagggcgtgctc 581 ||| || |||||||| |||||||| Sbjct: 27397 ctcgccgttggccagcgcgtgctc 27420
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp) Length = 1670 Score = 168 bits (85), Expect = 1e-38 Identities = 190/225 (84%) Strand = Plus / Minus Query: 231 gatagggaggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgctt 290 |||||| |||||||| || ||||||||||| |||||||| || ||||| ||||||||||| Sbjct: 1424 gataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgtgctt 1365 Query: 291 accctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctc 350 || |||||||||||||||||||| ||||||||||| || || || ||||| |||||||| Sbjct: 1364 gccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtcttctc 1305 Query: 351 tccggtcaagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccg 410 || ||||||||| |||| || ||||||| |||||| |||||||| || ||||| ||||| Sbjct: 1304 cccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggtacgaccg 1245 Query: 411 gcagtctacgatacggtttggttctgcggcggtgccattctccac 455 || || |||||||||| | | ||| || |||||||||||||| Sbjct: 1244 acattcggagatacggttttgctgtgctgcagtgccattctccac 1200 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 ||||||||||||||| |||||| |||| ||||||| || || ||||||| | |||| || Sbjct: 1157 gagctcctgctcgaacgtggcaagcttggcaaacactgacgtctccacgtcgtgctcggc 1098 Query: 558 ctcaccattggccagggcgtgctccaccagcaccgcacgcat 599 |||||||||||||| |||||||||||| || ||||||||||| Sbjct: 1097 ctcaccattggccaaggcgtgctccacaagaaccgcacgcat 1056
>ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 153 bits (77), Expect = 8e-34 Identities = 161/189 (85%) Strand = Plus / Minus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggcactccagcagcgcatcgat 284 ||||| ||| || |||||| ||||||||||||||||||| ||||| ||||||| ||| || Sbjct: 2142 ttagcagatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaat 2083 Query: 285 gtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagt 344 |||||| || ||||| ||||| |||| ||| |||| || |||||||||||| ||||| || Sbjct: 2082 gtgcttgccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 2023 Query: 345 cttctctccggtcaagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggta 404 |||||| ||||| | |||| | || || |||||||||||||||||||||||||| ||||| Sbjct: 2022 cttctcgccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggta 1963 Query: 405 tgaccggca 413 || ||||| Sbjct: 1962 ggagcggca 1954 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Minus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | ||| |||||| | ||||||||||| || ||||| ||| || Sbjct: 1869 gagctcctcctcgaactgggcgaccttggcgaacaccgaggtctcggcgttgaactcggc 1810 Query: 558 ctcaccattggccagggcgtgctccaccagcac 590 | | || ||||| |||||| ||||||| ||||| Sbjct: 1809 cgcgccgttggcgagggcgcgctccacaagcac 1777
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 153 bits (77), Expect = 8e-34 Identities = 146/169 (86%) Strand = Plus / Plus Query: 241 ggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttc 300 ||||||||||||||||||||||||||||| ||||| || ||||||||||| ||| ||||| Sbjct: 16320150 ggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgcttgcccaggttc 16320209 Query: 301 atggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaag 360 ||||| ||| |||| |||| ||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 16320210 atggcgacggacaccttgttcacctcctcgccgggcgaccgcgtcttctccccggtcaag 16320269 Query: 361 tacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgacc 409 ||| | || || ||||||| ||| || ||||||| || ||||| |||| Sbjct: 16320270 tactctgtcccgagctccttgcggacggaccggtagagcgggtacgacc 16320318 Score = 101 bits (51), Expect = 3e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||| |||| |||||||| |||||||||||||||| | | ||||||||| |||| Sbjct: 20335929 aggggcgcgcctttccactcgctgaggcactccagcagtgggttgatgtgcttgtgctgg 20335870 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 |||||||| | | ||| |||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 20335869 ttcatggcgatcaccaccttgtccacctcctccccgggcgaccgcgtcttctcgccggtc 20335810 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggta 404 | |||| | | ||| ||||||| |||||| |||| |||||| ||||| Sbjct: 20335809 aggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 20335763 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | || |||||| | ||||||||||| || ||||||||||| || Sbjct: 16320410 gagctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgc 16320469 Query: 558 ctcaccattggccagggcgtgctc 581 ||| || |||||||| ||||||| Sbjct: 16320470 ctcgccgttggccagcccgtgctc 16320493 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 520 accttgccaaacaccgaggtttccacgttgcgctcagcctcaccattggccagggcgtgc 579 |||||| | |||||||||| || ||||||||||| ||||| || |||||||| |||||| Sbjct: 16319909 accttggcgaacaccgaggagtcgacgttgcgctccgcctcgccgttggccagcgcgtgc 16319850 Query: 580 tc 581 || Sbjct: 16319849 tc 16319848 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 7328557 aatttggcaaccttgccaaa 7328538
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 153 bits (77), Expect = 8e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggcactccagcagcgcatcgat 284 ||||| ||| || |||||| ||||||||||||||||||| ||||| ||||||| ||| || Sbjct: 25011623 ttagcagatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaat 25011682 Query: 285 gtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagt 344 |||||| || ||||| ||||| |||| ||| |||| || |||||||||||| ||||| || Sbjct: 25011683 gtgcttgccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 25011742 Query: 345 cttctctccggtcaagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggta 404 |||||| ||||| | |||| | || || |||||||||||||||||||||||||| ||||| Sbjct: 25011743 cttctcgccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggta 25011802 Query: 405 tgaccggca 413 || ||||| Sbjct: 25011803 ggagcggca 25011811 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Plus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 |||| ||||| ||||||||||| || ||||||| ||||||||||| | || ||| |||| Sbjct: 25004095 cgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatgg 25004154 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| || |||||||||||| ||||| |||||||| ||||| | |||| Sbjct: 25004155 cgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtact 25004214 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| | |||||||||||| |||||||| || ||||| || ||||| Sbjct: 25004215 cggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggca 25004263 Score = 91.7 bits (46), Expect = 3e-15 Identities = 130/158 (82%) Strand = Plus / Plus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || ||||||||||| || | | Sbjct: 25025231 aggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttgccttcg 25025290 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 || || || || | || |||| || ||||||||| || || || |||||||| |||||| Sbjct: 25025291 ttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgtcttctcgccggtc 25025350 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggta 395 | |||| || || |||||||||||||| |||||||| Sbjct: 25025351 aggtactttgttccgagctcctcgcgcacgaaccggta 25025388 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggca 266 |||| |||| || ||||||||||||||||||||||||||||| Sbjct: 24992253 ttagttgatgggaaggggctcgccgttccactccttgaggca 24992294 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Plus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | ||| |||||| | ||||||||||| || ||||| ||| || Sbjct: 25011896 gagctcctcctcgaactgggcgaccttggcgaacaccgaggtctcggcgttgaactcggc 25011955 Query: 558 ctcaccattggccagggcgtgctccaccagcac 590 | | || ||||| |||||| ||||||| ||||| Sbjct: 25011956 cgcgccgttggcgagggcgcgctccacaagcac 25011988
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 153 bits (77), Expect = 8e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggcactccagcagcgcatcgat 284 ||||| ||| || |||||| ||||||||||||||||||| ||||| ||||||| ||| || Sbjct: 24611 ttagcagatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaat 24670 Query: 285 gtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagt 344 |||||| || ||||| ||||| |||| ||| |||| || |||||||||||| ||||| || Sbjct: 24671 gtgcttgccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgt 24730 Query: 345 cttctctccggtcaagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggta 404 |||||| ||||| | |||| | || || |||||||||||||||||||||||||| ||||| Sbjct: 24731 cttctcgccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggta 24790 Query: 405 tgaccggca 413 || ||||| Sbjct: 24791 ggagcggca 24799 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Plus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 |||| ||||| ||||||||||| || ||||||| ||||||||||| | || ||| |||| Sbjct: 17083 cgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatgg 17142 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| || |||||||||||| ||||| |||||||| ||||| | |||| Sbjct: 17143 cgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtact 17202 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| | |||||||||||| |||||||| || ||||| || ||||| Sbjct: 17203 cggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggca 17251 Score = 91.7 bits (46), Expect = 3e-15 Identities = 130/158 (82%) Strand = Plus / Plus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || ||||||||||| || | | Sbjct: 38219 aggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttgccttcg 38278 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 || || || || | || |||| || ||||||||| || || || |||||||| |||||| Sbjct: 38279 ttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgtcttctcgccggtc 38338 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggta 395 | |||| || || |||||||||||||| |||||||| Sbjct: 38339 aggtactttgttccgagctcctcgcgcacgaaccggta 38376 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggca 266 |||| |||| || ||||||||||||||||||||||||||||| Sbjct: 5241 ttagttgatgggaaggggctcgccgttccactccttgaggca 5282 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Plus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | ||| |||||| | ||||||||||| || ||||| ||| || Sbjct: 24884 gagctcctcctcgaactgggcgaccttggcgaacaccgaggtctcggcgttgaactcggc 24943 Query: 558 ctcaccattggccagggcgtgctccaccagcac 590 | | || ||||| |||||| ||||||| ||||| Sbjct: 24944 cgcgccgttggcgagggcgcgctccacaagcac 24976
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 153 bits (77), Expect = 8e-34 Identities = 146/169 (86%) Strand = Plus / Plus Query: 241 ggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttc 300 ||||||||||||||||||||||||||||| ||||| || ||||||||||| ||| ||||| Sbjct: 16273383 ggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgcttgcccaggttc 16273442 Query: 301 atggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaag 360 ||||| ||| |||| |||| ||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 16273443 atggcgacggacaccttgttcacctcctcgccgggcgaccgcgtcttctccccggtcaag 16273502 Query: 361 tacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgacc 409 ||| | || || ||||||| ||| || ||||||| || ||||| |||| Sbjct: 16273503 tactctgtcccgagctccttgcggacggaccggtagagcgggtacgacc 16273551 Score = 101 bits (51), Expect = 3e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||| |||| |||||||| |||||||||||||||| | | ||||||||| |||| Sbjct: 20262143 aggggcgcgcctttccactcgctgaggcactccagcagtgggttgatgtgcttgtgctgg 20262084 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 |||||||| | | ||| |||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 20262083 ttcatggcgatcaccaccttgtccacctcctccccgggcgaccgcgtcttctcgccggtc 20262024 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggta 404 | |||| | | ||| ||||||| |||||| |||| |||||| ||||| Sbjct: 20262023 aggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 20261977 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | || |||||| | ||||||||||| || ||||||||||| || Sbjct: 16273643 gagctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgc 16273702 Query: 558 ctcaccattggccagggcgtgctc 581 ||| || |||||||| ||||||| Sbjct: 16273703 ctcgccgttggccagcccgtgctc 16273726 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 520 accttgccaaacaccgaggtttccacgttgcgctcagcctcaccattggccagggcgtgc 579 |||||| | |||||||||| || ||||||||||| ||||| || |||||||| |||||| Sbjct: 16273142 accttggcgaacaccgaggagtcgacgttgcgctccgcctcgccgttggccagcgcgtgc 16273083 Query: 580 tc 581 || Sbjct: 16273082 tc 16273081 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 7328436 aatttggcaaccttgccaaa 7328417
>emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC OSJNBb0119N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79613 Score = 153 bits (77), Expect = 8e-34 Identities = 146/169 (86%) Strand = Plus / Plus Query: 241 ggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttc 300 ||||||||||||||||||||||||||||| ||||| || ||||||||||| ||| ||||| Sbjct: 67201 ggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgcttgcccaggttc 67260 Query: 301 atggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaag 360 ||||| ||| |||| |||| ||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 67261 atggcgacggacaccttgttcacctcctcgccgggcgaccgcgtcttctccccggtcaag 67320 Query: 361 tacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgacc 409 ||| | || || ||||||| ||| || ||||||| || ||||| |||| Sbjct: 67321 tactctgtcccgagctccttgcggacggaccggtagagcgggtacgacc 67369 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 498 gagctcctgctcgaatttggcaaccttgccaaacaccgaggtttccacgttgcgctcagc 557 |||||||| |||||| | || |||||| | ||||||||||| || ||||||||||| || Sbjct: 67461 gagctcctcctcgaacgtcgcgaccttggcgaacaccgaggtgtcgacgttgcgctccgc 67520 Query: 558 ctcaccattggccagggcgtgctc 581 ||| || |||||||| ||||||| Sbjct: 67521 ctcgccgttggccagcccgtgctc 67544 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 520 accttgccaaacaccgaggtttccacgttgcgctcagcctcaccattggccagggcgtgc 579 |||||| | |||||||||| || ||||||||||| ||||| || |||||||| |||||| Sbjct: 66960 accttggcgaacaccgaggagtcgacgttgcgctccgcctcgccgttggccagcgcgtgc 66901 Query: 580 tc 581 || Sbjct: 66900 tc 66899
>gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2139 Score = 145 bits (73), Expect = 2e-31 Identities = 148/173 (85%) Strand = Plus / Minus Query: 241 ggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttc 300 ||||||||||||||||||||||||||||| ||||||| || |||||||| |||||||| Sbjct: 2123 ggctcgccgttccactccttgaggcactcaagcagcgggtcaatgtgcttgccctggttg 2064 Query: 301 atggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaag 360 ||||| | || ||| |||| || ||||||||| || ||||| |||||||| ||||| | | Sbjct: 2063 atggcgaggagcaccttgttcagctcctcgcccggcgaccgtgtcttctcgccggtgagg 2004 Query: 361 tacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 ||| |||| || ||||||||||| |||||||||||||| || || |||||||| Sbjct: 2003 tactccgtcccgagctcctcgcgtacaaaccggtacaggggatacgaccggca 1951
>gb|BT018802.1| Zea mays clone EL01N0529D05.d mRNA sequence Length = 1451 Score = 143 bits (72), Expect = 8e-31 Identities = 150/176 (85%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||| ||||||||||||||||||||||||| ||||||| ||||||||||| | |||| Sbjct: 1113 aggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgctgg 1054 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 || ||||| |||| ||| |||| | |||||||||||| |||| ||| |||| |||||| Sbjct: 1053 ttgatggccacgagcaccttgttgagctcctcgccgggggacctggtcctctcgccggtc 994 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | |||| | ||||| | |||||||||||| ||||||||||| ||||| |||||||| Sbjct: 993 aggtactcggtgccgacctcctcgcgcacgaaccggtacagcgggtaggaccggca 938 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 565 ttggccagggcgtgctccaccagcaccgc 593 |||||||| |||||||| ||||||||||| Sbjct: 786 ttggccagcgcgtgctcgaccagcaccgc 758
>gb|AY005474.1| Triticum aestivum inducible phenylalanine ammonia-lyase mRNA, partial cds Length = 1933 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||||||||||| ||||||||||| | || | Sbjct: 1622 aggggctcgccgttccactccttgaggcactccagcagcgggtcgatgtgcttgcgctcg 1563 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 |||||||| || | ||| |||| || |||||| ||||| || || |||||||| |||||| Sbjct: 1562 ttcatggccaccagcaccttgttcagctcctccccgggcgaacgcgtcttctcgccggtc 1503 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggcagtc 416 | |||| ||||||| | |||||||||| ||| ||||||| ||||| || |||||||| Sbjct: 1502 aggtactccgtgccgcacacctcgcgcacgaactggtacagcgggtaggagcggcagtc 1444 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 565 ttggccagggcgtgctccaccagcaccgcacgca 598 |||||||| |||||||||||||||||||| |||| Sbjct: 1295 ttggccagcgcgtgctccaccagcaccgcccgca 1262
>gb|AY104679.1| Zea mays PCO142078 mRNA sequence Length = 1864 Score = 135 bits (68), Expect = 2e-28 Identities = 149/176 (84%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||| ||||||||||||||||||||||||| ||||||| ||||||||||| | |||| Sbjct: 1559 aggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgctgg 1500 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 || ||||| |||| ||| |||| | |||||||||||| |||| ||| |||| |||||| Sbjct: 1499 ttgatggccacgagcaccttgttgagctcctcgccgggggacctggtcctctcgccggtc 1440 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | |||| | ||||| | ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1439 aggtactcggtgccgacgtcctcgcgcacgaaccggtacagcgggtaggaccggca 1384 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 541 tccacgttgcgctcagcctcaccattggccagggcgtgctccaccagcaccgc 593 ||||||| |||||| || || || |||||||| |||||||| ||||||||||| Sbjct: 1256 tccacgtcgcgctcggcgtcgccgttggccagcgcgtgctcgaccagcaccgc 1204
>ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 129 bits (65), Expect = 1e-26 Identities = 143/169 (84%) Strand = Plus / Minus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| || | Sbjct: 2131 cgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccctggttgatcg 2072 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| | |||||||||||| ||||| |||||||| ||||| | ||| Sbjct: 2071 cgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccggtgaggtagg 2012 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| |||||||||||||| |||||||| || ||||| || ||||| Sbjct: 2011 cggtgccgagctcctcgcgcacgaaccggtagagcgggtacgagcggca 1963
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 129 bits (65), Expect = 1e-26 Identities = 143/169 (84%) Strand = Plus / Plus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| || | Sbjct: 122641 cgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccctggttgatcg 122700 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| | |||||||||||| ||||| |||||||| ||||| | ||| Sbjct: 122701 cgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccggtgaggtagg 122760 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| |||||||||||||| |||||||| || ||||| || ||||| Sbjct: 122761 cggtgccgagctcctcgcgcacgaaccggtagagcgggtacgagcggca 122809
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 129 bits (65), Expect = 1e-26 Identities = 143/169 (84%) Strand = Plus / Plus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| || | Sbjct: 65222 cgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccctggttgatcg 65281 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| | |||||||||||| ||||| |||||||| ||||| | ||| Sbjct: 65282 cgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccggtgaggtagg 65341 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| |||||||||||||| |||||||| || ||||| || ||||| Sbjct: 65342 cggtgccgagctcctcgcgcacgaaccggtagagcgggtacgagcggca 65390
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 129 bits (65), Expect = 1e-26 Identities = 143/169 (84%) Strand = Plus / Plus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| || | Sbjct: 20809417 cgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccctggttgatcg 20809476 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| | |||||||||||| ||||| |||||||| ||||| | ||| Sbjct: 20809477 cgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccggtgaggtagg 20809536 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| |||||||||||||| |||||||| || ||||| || ||||| Sbjct: 20809537 cggtgccgagctcctcgcgcacgaaccggtagagcgggtacgagcggca 20809585
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 117 bits (59), Expect = 4e-23 Identities = 149/179 (83%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||| |||| |||||||| |||||||||||||||| | || ||||||||| |||| Sbjct: 110621 aggggcgcgcctttccactcgctgaggcactccagcagtggatggatgtgcttgtgctgg 110562 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 |||||||| | | ||| |||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 110561 ttcatggcgatcaccaccttgtccacctcctccccgggagaccgcgtcttctcgccggtc 110502 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggcagtc 416 | |||| | | ||| ||||||| |||||| |||| |||||| ||||| || |||||||| Sbjct: 110501 aggtactcggcgccgagctccttgcgcacgaacctgtacagcgggtacgagcggcagtc 110443
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 117 bits (59), Expect = 4e-23 Identities = 149/179 (83%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||| |||| |||||||| |||||||||||||||| | || ||||||||| |||| Sbjct: 28380689 aggggcgcgcctttccactcgctgaggcactccagcagtggatggatgtgcttgtgctgg 28380630 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 |||||||| | | ||| |||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 28380629 ttcatggcgatcaccaccttgtccacctcctccccgggagaccgcgtcttctcgccggtc 28380570 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggcagtc 416 | |||| | | ||| ||||||| |||||| |||| |||||| ||||| || |||||||| Sbjct: 28380569 aggtactcggcgccgagctccttgcgcacgaacctgtacagcgggtacgagcggcagtc 28380511
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 117 bits (59), Expect = 4e-23 Identities = 149/179 (83%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||| |||| |||||||| |||||||||||||||| | || ||||||||| |||| Sbjct: 28363138 aggggcgcgcctttccactcgctgaggcactccagcagtggatggatgtgcttgtgctgg 28363079 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 |||||||| | | ||| |||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 28363078 ttcatggcgatcaccaccttgtccacctcctccccgggagaccgcgtcttctcgccggtc 28363019 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggcagtc 416 | |||| | | ||| ||||||| |||||| |||| |||||| ||||| || |||||||| Sbjct: 28363018 aggtactcggcgccgagctccttgcgcacgaacctgtacagcgggtacgagcggcagtc 28362960
>ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2369 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 |||| ||||| ||||||||||| || ||||||| ||||||||||| | || ||| |||| Sbjct: 2286 cgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatgg 2227 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| || |||||||||||| ||||| |||||||| ||||| | |||| Sbjct: 2226 cgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtact 2167 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| | |||||||||||| |||||||| || ||||| || ||||| Sbjct: 2166 cggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggca 2118
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Plus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 |||| ||||| ||||||||||| || ||||||| ||||||||||| | || ||| |||| Sbjct: 165378 cgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatgg 165437 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| || |||||||||||| ||||| |||||||| ||||| | |||| Sbjct: 165438 cgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtact 165497 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| | |||||||||||| |||||||| || ||||| || ||||| Sbjct: 165498 cggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggca 165546 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggca 266 |||| |||| || ||||||||||||||||||||||||||||| Sbjct: 153536 ttagttgatgggaaggggctcgccgttccactccttgaggca 153577
>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full insert sequence Length = 2594 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 |||| ||||| ||||||||||| || ||||||| ||||||||||| | || ||| |||| Sbjct: 2286 cgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatgg 2227 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| || |||||||||||| ||||| |||||||| ||||| | |||| Sbjct: 2226 cgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtact 2167 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| | |||||||||||| |||||||| || ||||| || ||||| Sbjct: 2166 cggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggca 2118
>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) Length = 4843 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 |||| ||||| ||||||||||| || ||||||| ||||||||||| | || ||| |||| Sbjct: 4715 cgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatgg 4656 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| || |||||||||||| ||||| |||||||| ||||| | |||| Sbjct: 4655 cgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtact 4596 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| | |||||||||||| |||||||| || ||||| || ||||| Sbjct: 4595 cggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggca 4547
>dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F15, full insert sequence Length = 1835 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 |||| ||||| ||||||||||| || ||||||| ||||||||||| | || ||| |||| Sbjct: 1527 cgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatgg 1468 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| || |||||||||||| ||||| |||||||| ||||| | |||| Sbjct: 1467 cgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtact 1408 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| | |||||||||||| |||||||| || ||||| || ||||| Sbjct: 1407 cggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggca 1359
>dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G01, full insert sequence Length = 1589 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 245 cgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctggttcatgg 304 |||| ||||| ||||||||||| || ||||||| ||||||||||| | || ||| |||| Sbjct: 1243 cgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgctcgttgatgg 1184 Query: 305 caacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtcaagtaca 364 | |||| ||| |||| || |||||||||||| ||||| |||||||| ||||| | |||| Sbjct: 1183 cgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccggtgaggtact 1124 Query: 365 ccgtgcccagctcctcgcgcacaaaccggtacagagggtatgaccggca 413 | ||||| | |||||||||||| |||||||| || ||||| || ||||| Sbjct: 1123 cggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggca 1075
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 101 bits (51), Expect = 3e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||| |||| |||||||| |||||||||||||||| | | ||||||||| |||| Sbjct: 175772 aggggcgcgcctttccactcgctgaggcactccagcagtgggttgatgtgcttgtgctgg 175831 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 |||||||| | | ||| |||||||||||||| ||||| ||||| |||||||| |||||| Sbjct: 175832 ttcatggcgatcaccaccttgtccacctcctccccgggcgaccgcgtcttctcgccggtc 175891 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggtacagagggta 404 | |||| | | ||| ||||||| |||||| |||| |||||| ||||| Sbjct: 175892 aggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 175938
>ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2407 Score = 91.7 bits (46), Expect = 3e-15 Identities = 130/158 (82%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || ||||||||||| || | | Sbjct: 2164 aggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttgccttcg 2105 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 || || || || | || |||| || ||||||||| || || || |||||||| |||||| Sbjct: 2104 ttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgtcttctcgccggtc 2045 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggta 395 | |||| || || |||||||||||||| |||||||| Sbjct: 2044 aggtactttgttccgagctcctcgcgcacgaaccggta 2007
>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene Length = 4660 Score = 91.7 bits (46), Expect = 3e-15 Identities = 130/158 (82%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || ||||||||||| || | | Sbjct: 4563 aggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttgccttcg 4504 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 || || || || | || |||| || ||||||||| || || || |||||||| |||||| Sbjct: 4503 ttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgtcttctcgccggtc 4444 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggta 395 | |||| || || |||||||||||||| |||||||| Sbjct: 4443 aggtactttgttccgagctcctcgcgcacgaaccggta 4406
>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full insert sequence Length = 2406 Score = 91.7 bits (46), Expect = 3e-15 Identities = 130/158 (82%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || ||||||||||| || | | Sbjct: 2163 aggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttgccttcg 2104 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgaccgagtcttctctccggtc 357 || || || || | || |||| || ||||||||| || || || |||||||| |||||| Sbjct: 2103 ttgatagccacaagaaccttgttcagctcctcgccaggcgatcgtgtcttctcgccggtc 2044 Query: 358 aagtacaccgtgcccagctcctcgcgcacaaaccggta 395 | |||| || || |||||||||||||| |||||||| Sbjct: 2043 aggtactttgttccgagctcctcgcgcacgaaccggta 2006
>ref|XM_473192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 67.9 bits (34), Expect = 4e-08 Identities = 132/162 (81%), Gaps = 2/162 (1%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || |||||| |||| | || | Sbjct: 2111 aggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagcttgcgctcg 2052 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgac-cgagtcttctctccggt 356 | ||||| | |||||| |||| |||||||||||| ||| ||| |||||||||||| Sbjct: 2051 ctgatggccaggaacaccttgttgcactcctcgccgggggacttgag-cttctctccggt 1993 Query: 357 caagtacaccgtgcccagctcctcgcgcacaaaccggtacag 398 | |||||| ||| ||||||||||| || || |||||||| Sbjct: 1992 gaggtacacgcagccgagctcctcgcggacgaagcggtacag 1951
>gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12, complete sequence Length = 131944 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 280 tcgatgtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgac 339 ||||||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||| ||| Sbjct: 111852 tcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcgac 111911 Query: 340 cg 341 || Sbjct: 111912 cg 111913 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 283 atgtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccg 341 |||||||| ||||||||||||| |||||||| |||| ||| |||||||| |||||||| Sbjct: 111329 atgtgcttgacctggttcatggcgacgaacaccttgttcacatcctcgccaggtgaccg 111387
>gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0024A05, complete sequence Length = 82985 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 280 tcgatgtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgac 339 ||||||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||| ||| Sbjct: 6371 tcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcgac 6430 Query: 340 cg 341 || Sbjct: 6431 cg 6432 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 283 atgtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccg 341 |||||||| ||||||||||||| |||||||| |||| ||| |||||||| |||||||| Sbjct: 5848 atgtgcttgacctggttcatggcgacgaacaccttgttcacatcctcgccaggtgaccg 5906
>gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24080 phenylalanine ammonia-lyase mRNA, complete cds Length = 2016 Score = 67.9 bits (34), Expect = 4e-08 Identities = 132/162 (81%), Gaps = 2/162 (1%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || |||||| |||| | || | Sbjct: 2003 aggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagcttgcgctcg 1944 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgac-cgagtcttctctccggt 356 | ||||| | |||||| |||| |||||||||||| ||| ||| |||||||||||| Sbjct: 1943 ctgatggccaggaacaccttgttgcactcctcgccgggggacttgag-cttctctccggt 1885 Query: 357 caagtacaccgtgcccagctcctcgcgcacaaaccggtacag 398 | |||||| ||| ||||||||||| || || |||||||| Sbjct: 1884 gaggtacacgcagccgagctcctcgcggacgaagcggtacag 1843
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 280 tcgatgtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgac 339 ||||||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||| ||| Sbjct: 12907319 tcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcgac 12907260 Query: 340 cg 341 || Sbjct: 12907259 cg 12907258 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 283 atgtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccg 341 |||||||| ||||||||||||| |||||||| |||| ||| |||||||| |||||||| Sbjct: 12907842 atgtgcttgacctggttcatggcgacgaacaccttgttcacatcctcgccaggtgaccg 12907784 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 28361462 aatttggcaaccttgccaaa 28361443
>gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia-lyase mRNA, complete cds Length = 2353 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggcactccagca 274 |||| |||| || |||||||||||||||||||||||||||||||| |||| Sbjct: 2107 ttagttgatgggcaggggctcgccgttccactccttgaggcactcgagca 2058
>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone: B1052H09 Length = 190806 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 280 tcgatgtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgac 339 ||||||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||| ||| Sbjct: 44299 tcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcgac 44240 Query: 340 cg 341 || Sbjct: 44239 cg 44238 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 283 atgtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccg 341 |||||||| ||||||||||||| |||||||| |||| ||| |||||||| |||||||| Sbjct: 44822 atgtgcttgacctggttcatggcgacgaacaccttgttcacatcctcgccaggtgaccg 44764
>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0061E21 Length = 155085 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 280 tcgatgtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgac 339 ||||||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||| ||| Sbjct: 107837 tcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcgac 107778 Query: 340 cg 341 || Sbjct: 107777 cg 107776 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 283 atgtgcttaccctggttcatggcaacgaacactttgtccacctcctcgccgggtgaccg 341 |||||||| ||||||||||||| |||||||| |||| ||| |||||||| |||||||| Sbjct: 108360 atgtgcttgacctggttcatggcgacgaacaccttgttcacatcctcgccaggtgaccg 108302
>dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082J11, full insert sequence Length = 2510 Score = 67.9 bits (34), Expect = 4e-08 Identities = 132/162 (81%), Gaps = 2/162 (1%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagcagcgcatcgatgtgcttaccctgg 297 |||||||||||||||||||||||||||||||| |||| || |||||| |||| | || | Sbjct: 2203 aggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagcttgcgctcg 2144 Query: 298 ttcatggcaacgaacactttgtccacctcctcgccgggtgac-cgagtcttctctccggt 356 | ||||| | |||||| |||| |||||||||||| ||| ||| |||||||||||| Sbjct: 2143 ctgatggccaggaacaccttgttgcactcctcgccgggggacttgag-cttctctccggt 2085 Query: 357 caagtacaccgtgcccagctcctcgcgcacaaaccggtacag 398 | |||||| ||| ||||||||||| || || |||||||| Sbjct: 2084 gaggtacacgcagccgagctcctcgcggacgaagcggtacag 2043
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp) Length = 1831 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactccagca 274 |||||||||||||||||||||||||||||||| |||| Sbjct: 1480 aggggctcgccgttccactccttgaggcactcgagca 1444
>ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2502 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggca 266 |||| |||| || ||||||||||||||||||||||||||||| Sbjct: 2192 ttagttgatgggaaggggctcgccgttccactccttgaggca 2151
>emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyase (EC 4.3.1.5) Length = 4412 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggca 266 |||| |||| || ||||||||||||||||||||||||||||| Sbjct: 4069 ttagttgatgggaaggggctcgccgttccactccttgaggca 4028
>dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N04, full insert sequence Length = 2504 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggca 266 |||| |||| || ||||||||||||||||||||||||||||| Sbjct: 2194 ttagttgatgggaaggggctcgccgttccactccttgaggca 2153
>dbj|AK067923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126B03, full insert sequence Length = 1531 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggca 266 |||| |||| || ||||||||||||||||||||||||||||| Sbjct: 1221 ttagttgatgggaaggggctcgccgttccactccttgaggca 1180
>dbj|AK058306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H03, full insert sequence Length = 1298 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 225 ttagctgatagggaggggctcgccgttccactccttgaggca 266 |||| |||| || ||||||||||||||||||||||||||||| Sbjct: 986 ttagttgatgggaaggggctcgccgttccactccttgaggca 945
>gb|AC132328.3| Mus musculus BAC clone RP24-195C6 from 10, complete sequence Length = 146064 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 205 tcttctcttcatctcattgatta 227 ||||||||||||||||||||||| Sbjct: 108181 tcttctcttcatctcattgatta 108203
>emb|CR848040.6| Zebrafish DNA sequence from clone DKEY-19P15 in linkage group 13, complete sequence Length = 146215 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 acgttaatgcatcagcttttta 137 |||||||||||||||||||||| Sbjct: 88321 acgttaatgcatcagcttttta 88300
>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds Length = 2488 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 241 ggctcgccgttccactccttgaggcactccagca 274 |||| ||||| |||||||||||||||||| |||| Sbjct: 2203 ggcttgccgtcccactccttgaggcactcgagca 2170 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 373 agctcctcgcgcacaaaccggtacagagggtatgaccggc 412 |||||||||||||| || |||||||| ||| | ||||||| Sbjct: 2071 agctcctcgcgcacgaagcggtacagcgggaacgaccggc 2032
>gb|AY103647.1| Zea mays PCO142084 mRNA sequence Length = 2598 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 241 ggctcgccgttccactccttgaggcactccagca 274 |||| ||||| |||||||||||||||||| |||| Sbjct: 2199 ggcttgccgtcccactccttgaggcactcgagca 2166 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 373 agctcctcgcgcacaaaccggtacagagggtatgaccggc 412 |||||||||||||| || |||||||| ||| | ||||||| Sbjct: 2067 agctcctcgcgcacgaagcggtacagcgggaacgaccggc 2028
>gb|M95077.1|MZEORFR Zea mays putative phenylalanine ammonia lyase mRNA, partial cds Length = 190 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 241 ggctcgccgttccactccttgaggcactccagca 274 |||| ||||| |||||||||||||||||| |||| Sbjct: 165 ggcttgccgtcccactccttgaggcactcgagca 132
>gb|AC087434.3| Pan troglodytes clone RP43-90F9, complete sequence Length = 161716 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gcagcctcaacctcctgaggt 486 ||||||||||||||||||||| Sbjct: 3124 gcagcctcaacctcctgaggt 3144
>gb|AY795080.1| Brassica napus phenylalanine ammonia-lyase (PAL2-2) mRNA, complete cds Length = 2446 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 247 ccgttccactccttgaggcactcca 271 |||||||| |||||||||||||||| Sbjct: 2272 ccgttccattccttgaggcactcca 2248
>gb|AY795079.1| Brassica napus phenylalanine ammonia-lyase (PAL2-2) gene, complete cds Length = 2742 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 247 ccgttccactccttgaggcactcca 271 |||||||| |||||||||||||||| Sbjct: 2593 ccgttccattccttgaggcactcca 2569
>gb|AC149880.2| Xenopus tropicalis clone CH216-6G14, complete sequence Length = 200980 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 atttggcaaccttgccaaaca 532 ||||||||||||||||||||| Sbjct: 108348 atttggcaaccttgccaaaca 108328
>gb|AC146870.3| Xenopus tropicalis clone CH216-139C6, complete sequence Length = 168665 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 atttggcaaccttgccaaaca 532 ||||||||||||||||||||| Sbjct: 13542 atttggcaaccttgccaaaca 13562 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tttggcaaccttgccaaaca 532 |||||||||||||||||||| Sbjct: 29222 tttggcaaccttgccaaaca 29241
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 tcttctcttcatctcattgat 225 ||||||||||||||||||||| Sbjct: 1126211 tcttctcttcatctcattgat 1126191
>gb|AY657002.1| Streptococcus pyogenes 2812A conjugative transposon Tn1207.3, complete sequence Length = 52491 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 tcttctcttcatctcattgat 225 ||||||||||||||||||||| Sbjct: 45817 tcttctcttcatctcattgat 45837
>gb|AC146485.2| Xenopus tropicalis clone CH216-8M11, complete sequence Length = 191742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 atttggcaaccttgccaaaca 532 ||||||||||||||||||||| Sbjct: 149932 atttggcaaccttgccaaaca 149952
>gb|AC149479.1| Populus trichocarpa clone Pop1-017N13, complete sequence Length = 129742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 tcatgaaaatttatacccttt 81 ||||||||||||||||||||| Sbjct: 123937 tcatgaaaatttatacccttt 123917
>gb|AC149297.1| Populus trichocarpa clone Pop1-015H07, complete sequence Length = 131790 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 tcatgaaaatttatacccttt 81 ||||||||||||||||||||| Sbjct: 100548 tcatgaaaatttatacccttt 100568
>gb|AY445042.1| Streptococcus pyogenes SpyM6 mefA phage-element, complete sequence Length = 58761 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 tcttctcttcatctcattgat 225 ||||||||||||||||||||| Sbjct: 52169 tcttctcttcatctcattgat 52189
>gb|AC005056.2| Homo sapiens BAC clone CTB-51J22 from 7, complete sequence Length = 98188 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgaggt 486 ||||||||||||||||||||| Sbjct: 12195 gcagcctcaacctcctgaggt 12175
>gb|AC091092.3| Papio anubis clone RP41-191D8, complete sequence Length = 167732 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gcagcctcaacctcctgaggt 486 ||||||||||||||||||||| Sbjct: 56089 gcagcctcaacctcctgaggt 56109
>ref|XM_504129.1| Yarrowia lipolytica CLIB122, YALI0E19008g predicted mRNA Length = 1650 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 ggcaacgaacactttgtccac 323 ||||||||||||||||||||| Sbjct: 808 ggcaacgaacactttgtccac 828
>emb|AL139326.15| Human DNA sequence from clone RP11-351K3 on chromosome 13 Contains the 3' end of the COG3 gene for component of oligomeric golgi complex 3, a novel gene (FLJ32682),a translocase of inner mitochondrial membrane 9 homolog (yeast) (TIMM9) pseudogene and a CpG island, complete sequence Length = 175588 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gcagcctcaacctcctgaggt 486 ||||||||||||||||||||| Sbjct: 45462 gcagcctcaacctcctgaggt 45482
>gb|AC008763.9| Homo sapiens chromosome 19 clone CTD-3214H19, complete sequence Length = 177962 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gcagcctcaacctcctgaggt 486 ||||||||||||||||||||| Sbjct: 136192 gcagcctcaacctcctgaggt 136212
>gb|AE012280.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 188 of 460 of the complete genome Length = 10801 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 ccagcagcgcatcgatgtgct 289 ||||||||||||||||||||| Sbjct: 9325 ccagcagcgcatcgatgtgct 9345
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 ccagcagcgcatcgatgtgct 289 ||||||||||||||||||||| Sbjct: 2962029 ccagcagcgcatcgatgtgct 2962009
>gb|U63721.1|HSU63721 Human elastin (ELN) gene, partial cds, and LIM-kinase (LIMK1) gene, complete cds Length = 67046 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gcagcctcaacctcctgaggt 486 ||||||||||||||||||||| Sbjct: 22079 gcagcctcaacctcctgaggt 22099
>gb|AC092836.4| Homo sapiens BAC clone RP11-50B16 from 2, complete sequence Length = 165768 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgaggt 486 ||||||||||||||||||||| Sbjct: 24989 gcagcctcaacctcctgaggt 24969
>gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102F19, complete sequence Length = 143619 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gcagcctcaacctcctgaggt 486 ||||||||||||||||||||| Sbjct: 8490 gcagcctcaacctcctgaggt 8510
>gb|AY106831.1| Zea mays PCO142079 mRNA sequence Length = 2299 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggca 266 ||||||| ||||| ||||||||||||||| Sbjct: 1961 aggggcttgccgtcccactccttgaggca 1933
>gb|AC140933.1| Gallus gallus BAC clone TAM31-60P10 from chromosome ul, complete sequence Length = 119242 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 agctctagctccggaagaacg 118 ||||||||||||||||||||| Sbjct: 97742 agctctagctccggaagaacg 97762
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 ggcaacgaacactttgtccac 323 ||||||||||||||||||||| Sbjct: 2267701 ggcaacgaacactttgtccac 2267721
>gb|U62292.1|HSU62292 Human elastin (ELN) gene, partial cds Length = 20866 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gcagcctcaacctcctgaggt 486 ||||||||||||||||||||| Sbjct: 19104 gcagcctcaacctcctgaggt 19124
>gb|AC124333.13| Mus musculus chromosome 1, clone RP24-511E9, complete sequence Length = 185857 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gctctggcttctttggattc 38 |||||||||||||||||||| Sbjct: 67288 gctctggcttctttggattc 67307
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 29064 aatttggcaaccttgccaaa 29045
>ref|NM_001013703.2| Homo sapiens eukaryotic translation initiation factor 2 alpha kinase 4 (EIF2AK4), mRNA Length = 5532 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 5323 gcagcctcaacctcctgagg 5304
>gb|AC099597.6| Mus musculus chromosome 17, clone RP23-78K9, complete sequence Length = 272221 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 atttataccctttcacttac 88 |||||||||||||||||||| Sbjct: 118725 atttataccctttcacttac 118706
>gb|AC105153.6| Mus musculus chromosome 17, clone RP24-376L20, complete sequence Length = 184920 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 atttataccctttcacttac 88 |||||||||||||||||||| Sbjct: 1271 atttataccctttcacttac 1252
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 10113733 aatttggcaaccttgccaaa 10113714
>ref|XM_754112.1| Ustilago maydis 521 hypothetical protein (UM03058.1) partial mRNA Length = 2148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tcgaatttggcaaccttgcc 527 |||||||||||||||||||| Sbjct: 1589 tcgaatttggcaaccttgcc 1608
>emb|CT010484.7| Mouse DNA sequence from clone RP23-296N14 on chromosome 17, complete sequence Length = 212827 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 atttataccctttcacttac 88 |||||||||||||||||||| Sbjct: 136278 atttataccctttcacttac 136259
>gb|AC002303.1|HUAC002303 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-670B5 ~complete genomic sequence, complete sequence Length = 131530 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ctagcagcctcaacctcctg 482 |||||||||||||||||||| Sbjct: 38232 ctagcagcctcaacctcctg 38213
>emb|CR361566.15| Zebrafish DNA sequence from clone CH211-248E11 in linkage group 8, complete sequence Length = 182427 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gttaatgcatcagcttttta 137 |||||||||||||||||||| Sbjct: 82072 gttaatgcatcagcttttta 82091
>emb|AL645734.1| Human DNA sequence from clone RP11-399D6 on chromosome 9 Contains the 5' end of a novel gene, complete sequence Length = 76881 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 65098 gcagcctcaacctcctgagg 65079
>emb|AL360170.23| Human DNA sequence from clone RP11-131N13 on chromosome 10 Contains the 5' end of the gene for Ste20-related serine/threonine kinase (SLK) and a CpG island, complete sequence Length = 60252 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 14175 gcagcctcaacctcctgagg 14156
>emb|AL355615.12| Human DNA sequence from clone RP11-33E24 on chromosome 6 Contains a ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene, two novel genes, a pseudogene similar to part of heat shock 90kD protein 1, beta (HSPCB) and a CpG island, complete sequence Length = 178362 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 ctagcagcctcaacctcctg 482 |||||||||||||||||||| Sbjct: 76419 ctagcagcctcaacctcctg 76438
>emb|Z15116.1|HVPAZXG H.vulgare pazx gene encoding protein zx Length = 3283 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 tccacgttgcgctcagcctc 560 |||||||||||||||||||| Sbjct: 728 tccacgttgcgctcagcctc 747
>gb|BC009350.2| Homo sapiens eukaryotic translation initiation factor 2 alpha kinase 4, mRNA (cDNA clone IMAGE:4137621), partial cds Length = 3016 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 2815 gcagcctcaacctcctgagg 2796
>emb|AL832907.1|HSM804218 Homo sapiens mRNA; cDNA DKFZp762C0914 (from clone DKFZp762C0914) Length = 4816 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 4605 gcagcctcaacctcctgagg 4586
>emb|AL157497.1|HSM802494 Homo sapiens mRNA; cDNA DKFZp434F1312 (from clone DKFZp434F1312); partial cds Length = 3351 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 3142 gcagcctcaacctcctgagg 3123
>emb|AL137627.1|HSM802391 Homo sapiens mRNA; cDNA DKFZp434P0612 (from clone DKFZp434P0612); partial cds Length = 1138 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 899 gcagcctcaacctcctgagg 880
>emb|AJ243428.1|HSA243428 Homo sapiens partial mRNA for putative eIF2 alpha kinase (GCN2 gene) Length = 2162 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 1972 gcagcctcaacctcctgagg 1953
>emb|CR388065.20| Zebrafish DNA sequence from clone DKEY-119P2 in linkage group 5, complete sequence Length = 122916 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gttaatgcatcagcttttta 137 |||||||||||||||||||| Sbjct: 82800 gttaatgcatcagcttttta 82819
>emb|BX640473.9| Zebrafish DNA sequence from clone CH211-201F12 in linkage group 5, complete sequence Length = 193735 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gttaatgcatcagcttttta 137 |||||||||||||||||||| Sbjct: 126970 gttaatgcatcagcttttta 126989
>emb|BX323576.9| Zebrafish DNA sequence from clone DKEYP-77A12 in linkage group 7, complete sequence Length = 163069 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gttaatgcatcagcttttta 137 |||||||||||||||||||| Sbjct: 33092 gttaatgcatcagcttttta 33111
>emb|CR605057.1| full-length cDNA clone CS0DF018YI15 of Fetal brain of Homo sapiens (human) Length = 1037 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 971 gcagcctcaacctcctgagg 952
>gb|AC021755.9| Homo sapiens chromosome 15 clone RP11-521C20 map 15q15, complete sequence Length = 161794 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 53106 gcagcctcaacctcctgagg 53087
>gb|AC016482.5| Homo sapiens chromosome 17, clone RP11-19G24, complete sequence Length = 145909 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 143708 gcagcctcaacctcctgagg 143689
>gb|AC093663.4| Homo sapiens BAC clone RP11-477G18 from 4, complete sequence Length = 171745 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 agcagcctcaacctcctgag 484 |||||||||||||||||||| Sbjct: 112937 agcagcctcaacctcctgag 112956
>gb|AC121318.17| Mus musculus chromosome 1, clone RP24-377P1, complete sequence Length = 179884 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 gcctcaccattggccagggc 575 |||||||||||||||||||| Sbjct: 172941 gcctcaccattggccagggc 172922
>gb|AY064474.1| Homo sapiens interleukin 21 receptor (IL21R) gene, complete cds Length = 26391 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ctagcagcctcaacctcctg 482 |||||||||||||||||||| Sbjct: 16137 ctagcagcctcaacctcctg 16118
>gb|AC113015.12| Mus musculus chromosome 1, clone RP23-180E19, complete sequence Length = 188389 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 gcctcaccattggccagggc 575 |||||||||||||||||||| Sbjct: 35282 gcctcaccattggccagggc 35263
>emb|BX663518.10| Zebrafish DNA sequence from clone CH211-214O7 in linkage group 7, complete sequence Length = 200579 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gttaatgcatcagcttttta 137 |||||||||||||||||||| Sbjct: 20184 gttaatgcatcagcttttta 20165
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 59354 aatttggcaaccttgccaaa 59335
>gb|AC137146.9| Mus musculus chromosome 1, clone RP24-358I14, complete sequence Length = 189466 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 gctctggcttctttggattc 38 |||||||||||||||||||| Sbjct: 18735 gctctggcttctttggattc 18716
>gb|AC147892.2| Xenopus tropicalis clone CH216-35D21, complete sequence Length = 178580 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 atttggcaaccttgccaaac 531 |||||||||||||||||||| Sbjct: 139648 atttggcaaccttgccaaac 139629
>gb|AC025168.7|AC025168 Homo sapiens chromosome 15 clone RP11-43D14 map 15q14, complete sequence Length = 173336 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 168440 gcagcctcaacctcctgagg 168421
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 10111854 aatttggcaaccttgccaaa 10111835
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 23516211 aatttggcaaccttgccaaa 23516192
>emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in linkage group 7, complete sequence Length = 237129 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gttaatgcatcagcttttta 137 |||||||||||||||||||| Sbjct: 24538 gttaatgcatcagcttttta 24519
>gb|AC012594.7| Homo sapiens BAC clone RP11-519L16 from 2, complete sequence Length = 166702 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 catcttctcttcatctcatt 222 |||||||||||||||||||| Sbjct: 126966 catcttctcttcatctcatt 126985
>gb|AC068400.10| Homo sapiens chromosome 17, clone RP11-378E13, complete sequence Length = 205588 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 175755 gcagcctcaacctcctgagg 175774
>gb|AC007739.2| Homo sapiens BAC clone RP11-91L3 from 2, complete sequence Length = 159123 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 agcagcctcaacctcctgag 484 |||||||||||||||||||| Sbjct: 73287 agcagcctcaacctcctgag 73268
>gb|AC007900.5|AC007900 Homo sapiens chromosome 17, clone CTB-125F20, complete sequence Length = 74853 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 17129 gcagcctcaacctcctgagg 17110
>emb|BX005248.13| Zebrafish DNA sequence from clone CH211-155H12 in linkage group 8, complete sequence Length = 185135 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gttaatgcatcagcttttta 137 |||||||||||||||||||| Sbjct: 178288 gttaatgcatcagcttttta 178307
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 79516 aatttggcaaccttgccaaa 79497
>emb|BX000349.7| Zebrafish DNA sequence from clone DKEY-63L3 in linkage group 7, complete sequence Length = 173706 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gttaatgcatcagcttttta 137 |||||||||||||||||||| Sbjct: 62222 gttaatgcatcagcttttta 62203
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 90268 aatttggcaaccttgccaaa 90249
>emb|BX649048.1|HSM809199 Homo sapiens mRNA; cDNA DKFZp779G0220 (from clone DKFZp779G0220) Length = 4391 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 4190 gcagcctcaacctcctgagg 4171
>gb|AC151322.2| Xenopus tropicalis clone ISB-251M9, complete sequence Length = 75244 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tttggcaaccttgccaaaca 532 |||||||||||||||||||| Sbjct: 14391 tttggcaaccttgccaaaca 14410
>dbj|AK027011.1| Homo sapiens cDNA: FLJ23358 fis, clone HEP14996 Length = 2986 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 2783 gcagcctcaacctcctgagg 2764
>dbj|AK074361.1| Homo sapiens cDNA FLJ23781 fis, clone HEP20945, highly similar to Probable translation initiation factor eIF-2alpha kinase (EC 2.7.1.-) Length = 2224 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 2013 gcagcctcaacctcctgagg 1994
>emb|AJ243091.1|BNA243091 Brassica napus gbkr1 gene for beta-oxyacyl-[acyl-carrier protein] reductase, exons 1 to 11 Length = 4472 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 atttgtcatgaaaatttata 75 |||||||||||||||||||| Sbjct: 673 atttgtcatgaaaatttata 692
>emb|BX247878.5| Zebrafish DNA sequence from clone CH211-266O5 in linkage group 7, complete sequence Length = 190715 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gttaatgcatcagcttttta 137 |||||||||||||||||||| Sbjct: 161016 gttaatgcatcagcttttta 160997
>gb|AF152357.1|AF152357 Streptococcus thermophilus galactose mutarotase GalM (galM) gene, partial cds; and galactokinase GalK (galK) gene, complete cds Length = 2241 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 acttgttgatacagctctgg 25 |||||||||||||||||||| Sbjct: 2151 acttgttgatacagctctgg 2170
>emb|CR942484.2| Xenopus tropicalis finished cDNA, clone TEgg069d10 Length = 2240 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 tttggcaaccttgccaaaca 532 |||||||||||||||||||| Sbjct: 1933 tttggcaaccttgccaaaca 1914
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 caccgtgcccagctcctcgcgcac 386 ||||||||||||||| |||||||| Sbjct: 1137584 caccgtgcccagctcgtcgcgcac 1137607
>emb|AL732648.3|CNS08C9N Oryza sativa chromosome 12, . BAC OSJNBb0020J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133575 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 aatttggcaaccttgccaaa 530 |||||||||||||||||||| Sbjct: 43567 aatttggcaaccttgccaaa 43548
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccagggcgtgctccaccagc 588 |||||||||||||||||||| Sbjct: 301624 ccagggcgtgctccaccagc 301643
>emb|AL845369.7| Zebrafish DNA sequence from clone CH211-12E13 in linkage group 5, complete sequence Length = 190981 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gttaatgcatcagcttttta 137 |||||||||||||||||||| Sbjct: 141641 gttaatgcatcagcttttta 141660
>emb|AL137676.1|HSM802022 Homo sapiens mRNA; cDNA DKFZp434H149 (from clone DKFZp434H149) Length = 1917 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 1723 gcagcctcaacctcctgagg 1704
>gb|AC098597.2| Homo sapiens BAC clone RP11-521C6 from 4, complete sequence Length = 177846 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 63 atgaaaatttataccctttcacttacat 90 |||||||||| || |||||||||||||| Sbjct: 128404 atgaaaatttgtatcctttcacttacat 128431
>gb|AC090699.10| Homo sapiens chromosome 17, clone RP11-794C22, complete sequence Length = 138379 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 41173 gcagcctcaacctcctgagg 41192
>dbj|AB037759.1| Homo sapiens mRNA for KIAA1338 protein, partial cds Length = 4994 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gcagcctcaacctcctgagg 485 |||||||||||||||||||| Sbjct: 4811 gcagcctcaacctcctgagg 4792 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,726,110 Number of Sequences: 3902068 Number of extensions: 4726110 Number of successful extensions: 130991 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 129982 Number of HSP's gapped (non-prelim): 1001 length of query: 602 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 579 effective length of database: 17,143,297,704 effective search space: 9925969370616 effective search space used: 9925969370616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
