| Clone Name | rbags38i21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ATCX_SCHPO (Q09891) Putative phospholipid-transporting ATPase 1 ... | 30 | 5.3 | 2 | NUDEL_DROME (P98159) Serine protease nudel precursor (EC 3.4.21.-) | 29 | 9.0 | 3 | LPXC_CHLAB (Q5L725) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosa... | 29 | 9.0 |
|---|
>ATCX_SCHPO (Q09891) Putative phospholipid-transporting ATPase 1 (EC 3.6.3.1)| Length = 1402 Score = 30.0 bits (66), Expect = 5.3 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +2 Query: 38 PRSKLQLSKPTPLEFTMDN-FTNYIHIPRIITLNQLCNEGLTVRRSQANPG 187 PR+K++ +K TP++F N F + ++ + L + + +++ Q NPG Sbjct: 86 PRNKIRTAKYTPIDFIPKNIFLQFQNVANLFFLFLVILQSISIFGEQVNPG 136
>NUDEL_DROME (P98159) Serine protease nudel precursor (EC 3.4.21.-)| Length = 2616 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Frame = +2 Query: 8 TKKSCSSKQGPRSKLQLSKPTPLEFTMDNFTNYIH---IPRIITLNQLCNEGLT 160 T+++ S+ + PRS L PT +E +++F + I R++ N+ +E +T Sbjct: 553 TREAISNPESPRSSHPLDNPTSIENMLESFEQHEEQKPILRVLNANESSSETVT 606
>LPXC_CHLAB (Q5L725) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine| deacetylase (EC 3.5.1.-) (UDP-3-O-acyl-GlcNAc deacetylase) Length = 280 Score = 29.3 bits (64), Expect = 9.0 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +3 Query: 51 CNCQNQLPLSSPWTILLTISTFLVLLRSTNYATRDLR*GGVRPILDGDGPFHIFLQ 218 CN LSS +I+ T+ + LRS+N +R I GDG H+F+Q Sbjct: 59 CNTGRSTTLSSGDSIIATVEHLMAALRSSNIDNVIVR-CDEEEIPIGDGSSHVFMQ 113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,707,370 Number of Sequences: 219361 Number of extensions: 1496772 Number of successful extensions: 3311 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3311 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)