ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38i21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467362.1| Oryza sativa (japonica cultivar-group), mRNA 190 4e-45
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
3dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
4emb|BX294136.1| Pirellula sp. strain 1 complete genome; segment ... 46 0.13
5gb|AC137669.12| Medicago truncatula clone mth2-27m3, complete se... 44 0.52
6gb|AC165962.4| Mus musculus BAC clone RP23-362B7 from chromosome... 42 2.1
7gb|AC138173.2| Mus musculus strain C57BL/6J clone rp23-364j24 ma... 42 2.1
8gb|AC125544.4| Mus musculus BAC clone RP23-364A24 from chromosom... 42 2.1
9gb|AC119816.5| Mus musculus chromosome 5, clone RP23-59B8, compl... 42 2.1
10gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete s... 42 2.1
11gb|AC160532.4| Mus musculus chromosome 5, clone RP24-158N23, com... 42 2.1
12gb|AC016529.7|AC016529 Arabidopsis thaliana chromosome 1 BAC T10... 42 2.1
13dbj|AK173285.1| Mus musculus mRNA for mKIAA1880 protein 42 2.1
14emb|BX004855.10| Mouse DNA sequence from clone RP23-216P21 on ch... 42 2.1
15dbj|D28503.1|CLOHEMGS Clostridium josui hemA, hemC, hemD and hem... 42 2.1
16ref|NM_114951.2| Arabidopsis thaliana unknown protein AT3G50910 ... 40 8.1
17ref|NM_001012805.1| Gallus gallus ELG protein (HSA277841), mRNA 40 8.1
18gb|BC079526.1| Danio rerio zgc:92001, mRNA (cDNA clone MGC:92001... 40 8.1
19gb|AC113901.7| Rattus norvegicus 2 BAC CH230-328F5 (Children's H... 40 8.1
20gb|AC146131.4| Pan troglodytes BAC clone RP43-4F15 from 7, compl... 40 8.1
21gb|AC024730.7| Homo sapiens BAC clone RP11-422E4 from 7, complet... 40 8.1
22emb|Z84572.1|HS49J10 Human DNA sequence from clone RP1-49J10 on ... 40 8.1
23emb|AL359643.27| Human DNA sequence from clone RP11-428J1 on chr... 40 8.1
24emb|AL138820.11| Human DNA sequence from clone RP11-380B4 on chr... 40 8.1
25emb|AL049862.1|ATF18B3 Arabidopsis thaliana DNA chromosome 3, BA... 40 8.1
26gb|AC087301.8| Homo sapiens chromosome 17, clone RP11-661C3, com... 40 8.1
27emb|AJ719565.1| Gallus gallus mRNA for hypothetical protein, clo... 40 8.1
28ref|NM_001003739.1| Danio rerio zgc:92001 (zgc:92001), mRNA 40 8.1
29gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cance... 40 8.1
30gb|AC083868.3| Homo sapiens chromosome 7 clone RP11-148L5, compl... 40 8.1
31gb|AC034303.14| Homo sapiens chromosome 17, clone RP11-648P8, co... 40 8.1
32gb|AC103798.2| Homo sapiens chromosome 11, clone RP11-159D8, com... 40 8.1
33gb|AY039605.1| Arabidopsis thaliana AT3g50910/F18B3_190 mRNA, co... 40 8.1
34gb|AC020613.33|AC020613 Homo sapiens 12 BAC RP11-508P1 (Roswell ... 40 8.1
35emb|BX824431.1|CNS0A5OC Arabidopsis thaliana Full-length cDNA Co... 40 8.1
36gb|AC068706.6| Homo sapiens BAC clone RP11-703O4 from 2, complet... 40 8.1
37gb|AC002347.3| Homo sapiens chromosome 17, clone CTC-297N7, comp... 40 8.1
38gb|BT003021.1| Arabidopsis thaliana At3g50910/F18B3_190 gene, co... 40 8.1
39emb|AL805977.2| Human DNA sequence from clone RP11-491O20 on chr... 40 8.1
40emb|CR394522.8| Zebrafish DNA sequence from clone DKEY-159D6 in ... 40 8.1
41emb|CT010468.16| Mouse DNA sequence from clone RP23-315J19 on ch... 40 8.1
42dbj|AP006369.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 8.1 
>ref|XM_467362.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1371

 Score =  190 bits (96), Expect = 4e-45
 Identities = 156/176 (88%)
 Strand = Plus / Minus

                                                                        
Query: 420  gtaggaccaggcaatagctgctgtgccaagggtaactgctatgccaactgaaccccagaa 479
            ||||||||||||||| ||||||||||||||||||||||| |  ||||| || ||||||||
Sbjct: 1317 gtaggaccaggcaatggctgctgtgccaagggtaactgcaagcccaaccgagccccagaa 1258

                                                                        
Query: 480  ccacttctgccttatcttacgcttgttccgctgttgcctggacatctcgatagcttcttg 539
            ||||||||| ||  |||| ||  | || || |||||||| |||||||||||||| |||||
Sbjct: 1257 ccacttctgtctcttctttcggatatttcgttgttgcctcgacatctcgatagcctcttg 1198

                                                                    
Query: 540  gtttctctgagacatctccctgtttgctgcttcatagtactggaccctatctgata 595
            |||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 1197 gtttctttgagacatctccctgtttgcagcttcatagtactggaccctatcggata 1142
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  105 bits (53), Expect = 2e-19
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                            
Query: 527      cgatagcttcttggtttctctgagacatctccctgtttgctgcttcatagtactggaccc 586
                ||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 29091945 cgatagcctcttggtttctttgagacatctccctgtttgcagcttcatagtactggaccc 29092004

                         
Query: 587      tatctgata 595
                |||| ||||
Sbjct: 29092005 tatcggata 29092013



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                            
Query: 420      gtaggaccaggcaatagctgctgtgccaagggtaactgctatgccaactgaaccccagaa 479
                ||||||||||||||| ||||||||||||||||||||||| |  ||||| || ||||||||
Sbjct: 29091453 gtaggaccaggcaatggctgctgtgccaagggtaactgcaagcccaaccgagccccagaa 29091512

                         
Query: 480      ccacttctg 488
                |||||||||
Sbjct: 29091513 ccacttctg 29091521



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 133/162 (82%), Gaps = 7/162 (4%)
 Strand = Plus / Plus

                                                                            
Query: 107      atccacattcctcgtattattac-gctcaaccaactatgcaacgagggacttacggtaag 165
                |||||||||||||||||||||   || ||||||||||||||| |||||| |||| || ||
Sbjct: 29091153 atccacattcctcgtattatttttgcacaaccaactatgcaaagagggatttactgtgag 29091212

                                                                            
Query: 166      gaggagtcaggccaatcctggacggagatggcccattccacannnnnnnacagaggaagc 225
                |  || |   |||| ||||| | ||||||||||||||| |||       |||||||||||
Sbjct: 29091213 g--gaatggagccagtcctgtagggagatggcccattcgacattt----acagaggaagc 29091266

                                                          
Query: 226      ggcaaatgaggattgtagtgatcacagccgatcaccaaaaga 267
                ||| ||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 29091267 ggcgaatgaagattgcagtgatcacggccgatcaccaaaaga 29091308



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 336      gagaagatgcatcttcagctagctctaatcgctgttggt 374
                |||||||| |||||||| |||||||||||||||||||||
Sbjct: 29091375 gagaagatacatcttcatctagctctaatcgctgttggt 29091413
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>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0724B10
          Length = 169143

 Score =  105 bits (53), Expect = 2e-19
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                          
Query: 527    cgatagcttcttggtttctctgagacatctccctgtttgctgcttcatagtactggaccc 586
              ||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 138110 cgatagcctcttggtttctttgagacatctccctgtttgcagcttcatagtactggaccc 138169

                       
Query: 587    tatctgata 595
              |||| ||||
Sbjct: 138170 tatcggata 138178



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                          
Query: 420    gtaggaccaggcaatagctgctgtgccaagggtaactgctatgccaactgaaccccagaa 479
              ||||||||||||||| ||||||||||||||||||||||| |  ||||| || ||||||||
Sbjct: 137618 gtaggaccaggcaatggctgctgtgccaagggtaactgcaagcccaaccgagccccagaa 137677

                       
Query: 480    ccacttctg 488
              |||||||||
Sbjct: 137678 ccacttctg 137686



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 133/162 (82%), Gaps = 7/162 (4%)
 Strand = Plus / Plus

                                                                          
Query: 107    atccacattcctcgtattattac-gctcaaccaactatgcaacgagggacttacggtaag 165
              |||||||||||||||||||||   || ||||||||||||||| |||||| |||| || ||
Sbjct: 137318 atccacattcctcgtattatttttgcacaaccaactatgcaaagagggatttactgtgag 137377

                                                                          
Query: 166    gaggagtcaggccaatcctggacggagatggcccattccacannnnnnnacagaggaagc 225
              |  || |   |||| ||||| | ||||||||||||||| |||       |||||||||||
Sbjct: 137378 g--gaatggagccagtcctgtagggagatggcccattcgacattt----acagaggaagc 137431

                                                        
Query: 226    ggcaaatgaggattgtagtgatcacagccgatcaccaaaaga 267
              ||| ||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 137432 ggcgaatgaagattgcagtgatcacggccgatcaccaaaaga 137473



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 336    gagaagatgcatcttcagctagctctaatcgctgttggt 374
              |||||||| |||||||| |||||||||||||||||||||
Sbjct: 137540 gagaagatacatcttcatctagctctaatcgctgttggt 137578
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>emb|BX294136.1| Pirellula sp. strain 1 complete genome; segment 4/24
          Length = 259950

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 11     aagaaatcttgttcgagtaaacaaggc 37
              |||||||||| ||||||||||||||||
Sbjct: 203162 aagaaatcttattcgagtaaacaaggc 203136
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>gb|AC137669.12| Medicago truncatula clone mth2-27m3, complete sequence
          Length = 120323

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 532   gcttcttggtttctctgagacatctc 557
             ||||| ||||||||||||||||||||
Sbjct: 69546 gcttcctggtttctctgagacatctc 69571
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>gb|AC165962.4| Mus musculus BAC clone RP23-362B7 from chromosome 17, complete sequence
          Length = 179745

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 534   ttcttggtttctctgagacatctcc 558
             |||||||||||||||||| ||||||
Sbjct: 23346 ttcttggtttctctgagaaatctcc 23322
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>gb|AC138173.2| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete sequence
          Length = 145253

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 450    ggtaactgctatgccaactga 470
              |||||||||||||||||||||
Sbjct: 102224 ggtaactgctatgccaactga 102244
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>gb|AC125544.4| Mus musculus BAC clone RP23-364A24 from chromosome 17, complete sequence
          Length = 159298

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 534    ttcttggtttctctgagacatctcc 558
              |||||||||||||||||| ||||||
Sbjct: 101898 ttcttggtttctctgagaaatctcc 101922
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>gb|AC119816.5| Mus musculus chromosome 5, clone RP23-59B8, complete sequence
          Length = 186564

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 450    ggtaactgctatgccaactga 470
              |||||||||||||||||||||
Sbjct: 107541 ggtaactgctatgccaactga 107561
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>gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete sequence
          Length = 127132

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    gtcaaaaccaactccccttga 78
             |||||||||||||||||||||
Sbjct: 86103 gtcaaaaccaactccccttga 86123
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>gb|AC160532.4| Mus musculus chromosome 5, clone RP24-158N23, complete sequence
          Length = 160144

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 450   ggtaactgctatgccaactga 470
             |||||||||||||||||||||
Sbjct: 25748 ggtaactgctatgccaactga 25768
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>gb|AC016529.7|AC016529 Arabidopsis thaliana chromosome 1 BAC T10D10 genomic sequence, complete
             sequence
          Length = 87039

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 534   ttcttggtttctctgagacat 554
             |||||||||||||||||||||
Sbjct: 75382 ttcttggtttctctgagacat 75362
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>dbj|AK173285.1| Mus musculus mRNA for mKIAA1880 protein
          Length = 4852

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 534  ttcttggtttctctgagacatctcc 558
            |||||||||||||||||| ||||||
Sbjct: 4549 ttcttggtttctctgagaaatctcc 4573
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>emb|BX004855.10| Mouse DNA sequence from clone RP23-216P21 on chromosome X, complete
             sequence
          Length = 64417

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 546   ctgagacatctccctgtttgc 566
             |||||||||||||||||||||
Sbjct: 34854 ctgagacatctccctgtttgc 34874
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>dbj|D28503.1|CLOHEMGS Clostridium josui hemA, hemC, hemD and hemB genes of porphyrin
            biosynthesis
          Length = 5979

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 74   cttgagttcaccatggacaat 94
            |||||||||||||||||||||
Sbjct: 5158 cttgagttcaccatggacaat 5138
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>ref|NM_114951.2| Arabidopsis thaliana unknown protein AT3G50910 mRNA, complete cds
          Length = 1861

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 532  gcttcttggtttctctgagacatctccctgtt 563
            |||||||||||||  ||||||||||| |||||
Sbjct: 1462 gcttcttggtttcgttgagacatctctctgtt 1431
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>ref|NM_001012805.1| Gallus gallus ELG protein (HSA277841), mRNA
          Length = 3780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 gtaaggaggagtcaggccaa 180
           ||||||||||||||||||||
Sbjct: 966 gtaaggaggagtcaggccaa 947
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>gb|BC079526.1| Danio rerio zgc:92001, mRNA (cDNA clone MGC:92001 IMAGE:7043249),
           complete cds
          Length = 1695

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 aaggagaagatgcatcttca 352
           ||||||||||||||||||||
Sbjct: 615 aaggagaagatgcatcttca 634
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>gb|AC113901.7| Rattus norvegicus 2 BAC CH230-328F5 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 157435

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 552   catctccctgtttgctgctt 571
             ||||||||||||||||||||
Sbjct: 80753 catctccctgtttgctgctt 80772
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>gb|AC146131.4| Pan troglodytes BAC clone RP43-4F15 from 7, complete sequence
          Length = 179576

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   gaaccccagaaccacttctg 488
             ||||||||||||||||||||
Sbjct: 54459 gaaccccagaaccacttctg 54478
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>gb|AC024730.7| Homo sapiens BAC clone RP11-422E4 from 7, complete sequence
          Length = 151198

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   gaaccccagaaccacttctg 488
             ||||||||||||||||||||
Sbjct: 90078 gaaccccagaaccacttctg 90097
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>emb|Z84572.1|HS49J10 Human DNA sequence from clone RP1-49J10 on chromosome 13 Contains the
             3' end of the gene for androgen-induced prostate
             proliferative shutoff associated protein (AS3) (CG008,
             FLJ23236, KIAA0979), complete sequence
          Length = 137246

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tagttagagcttttgttagg 324
             ||||||||||||||||||||
Sbjct: 56891 tagttagagcttttgttagg 56910
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>emb|AL359643.27| Human DNA sequence from clone RP11-428J1 on chromosome 6 Contains the
             CDYL gene for a Y chromosome-like chromodomain protein, a
             ribosomal protein S18 (RPS18) pseudogene, the gene for
             ribonuclease P 40kD subunit (RPP40) and CpG islands,
             complete sequence
          Length = 166863

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 559   ctgtttgctgcttcatagta 578
             ||||||||||||||||||||
Sbjct: 69757 ctgtttgctgcttcatagta 69738
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>emb|AL138820.11| Human DNA sequence from clone RP11-380B4 on chromosome 13 Contains the
             3' end of the KIAA0979 gene and part of a novel gene,
             complete sequence
          Length = 168487

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tagttagagcttttgttagg 324
             ||||||||||||||||||||
Sbjct: 56373 tagttagagcttttgttagg 56392
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>emb|AL049862.1|ATF18B3 Arabidopsis thaliana DNA chromosome 3, BAC clone F18B3
          Length = 89469

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 532   gcttcttggtttctctgagacatctccctgtt 563
             |||||||||||||  ||||||||||| |||||
Sbjct: 70384 gcttcttggtttcgttgagacatctctctgtt 70353
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>gb|AC087301.8| Homo sapiens chromosome 17, clone RP11-661C3, complete sequence
          Length = 229153

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 541    tttctctgagacatctccct 560
              ||||||||||||||||||||
Sbjct: 134299 tttctctgagacatctccct 134280
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>emb|AJ719565.1| Gallus gallus mRNA for hypothetical protein, clone 3g9
          Length = 3780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 gtaaggaggagtcaggccaa 180
           ||||||||||||||||||||
Sbjct: 966 gtaaggaggagtcaggccaa 947
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>ref|NM_001003739.1| Danio rerio zgc:92001 (zgc:92001), mRNA
          Length = 1695

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 aaggagaagatgcatcttca 352
           ||||||||||||||||||||
Sbjct: 615 aaggagaagatgcatcttca 634
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>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159706

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   aaaagagaaaacttatacaa 281
             ||||||||||||||||||||
Sbjct: 76758 aaaagagaaaacttatacaa 76739
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>gb|AC083868.3| Homo sapiens chromosome 7 clone RP11-148L5, complete sequence
          Length = 183541

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    cccagatcaaaactgcaact 57
             ||||||||||||||||||||
Sbjct: 64115 cccagatcaaaactgcaact 64134
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>gb|AC034303.14| Homo sapiens chromosome 17, clone RP11-648P8, complete sequence
          Length = 157850

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   agaaccacttctgccttatc 495
             ||||||||||||||||||||
Sbjct: 90849 agaaccacttctgccttatc 90830
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>gb|AC103798.2| Homo sapiens chromosome 11, clone RP11-159D8, complete sequence
          Length = 163680

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   aagagaaaacttatacaagc 283
             ||||||||||||||||||||
Sbjct: 48268 aagagaaaacttatacaagc 48287
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>gb|AY039605.1| Arabidopsis thaliana AT3g50910/F18B3_190 mRNA, complete cds
          Length = 1736

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 532  gcttcttggtttctctgagacatctccctgtt 563
            |||||||||||||  ||||||||||| |||||
Sbjct: 1462 gcttcttggtttcgttgagacatctctctgtt 1431
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>gb|AC020613.33|AC020613 Homo sapiens 12 BAC RP11-508P1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 40199

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 555   ctccctgtttgctgcttcatagta 578
             |||||||||||| |||||||||||
Sbjct: 34239 ctccctgtttgcagcttcatagta 34216
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>emb|BX824431.1|CNS0A5OC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH48ZF05 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1749

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 532  gcttcttggtttctctgagacatctccctgtt 563
            |||||||||||||  ||||||||||| |||||
Sbjct: 1397 gcttcttggtttcgttgagacatctctctgtt 1366
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>gb|AC068706.6| Homo sapiens BAC clone RP11-703O4 from 2, complete sequence
          Length = 124146

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ggtaaggaggagtcaggcca 179
             ||||||||||||||||||||
Sbjct: 89259 ggtaaggaggagtcaggcca 89278
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>gb|AC002347.3| Homo sapiens chromosome 17, clone CTC-297N7, complete sequence
          Length = 134706

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    agaaccacttctgccttatc 495
              ||||||||||||||||||||
Sbjct: 119978 agaaccacttctgccttatc 119959
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>gb|BT003021.1| Arabidopsis thaliana At3g50910/F18B3_190 gene, complete cds
          Length = 1344

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 532  gcttcttggtttctctgagacatctccctgtt 563
            |||||||||||||  ||||||||||| |||||
Sbjct: 1184 gcttcttggtttcgttgagacatctctctgtt 1153
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>emb|AL805977.2| Human DNA sequence from clone RP11-491O20 on chromosome 6, complete
              sequence
          Length = 174830

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 469    gaaccccagaaccacttctg 488
              ||||||||||||||||||||
Sbjct: 146870 gaaccccagaaccacttctg 146851
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>emb|CR394522.8| Zebrafish DNA sequence from clone DKEY-159D6 in linkage group 22,
             complete sequence
          Length = 91897

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   aaaagagaaaacttatacaa 281
             ||||||||||||||||||||
Sbjct: 29972 aaaagagaaaacttatacaa 29991
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>emb|CT010468.16| Mouse DNA sequence from clone RP23-315J19 on chromosome 13, complete
              sequence
          Length = 155441

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 385    tttgagtccccagcctgggactgg 408
              |||||||| |||||||||||||||
Sbjct: 137820 tttgagtctccagcctgggactgg 137843
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>dbj|AP006369.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT20N03, TM0212,
             complete sequence
          Length = 87407

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 544   ctctgagacatctccctgtt 563
             ||||||||||||||||||||
Sbjct: 68471 ctctgagacatctccctgtt 68452


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,666,783
Number of Sequences: 3902068
Number of extensions: 4666783
Number of successful extensions: 78344
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78257
Number of HSP's gapped (non-prelim): 84
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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