>YN81_CAEEL (Q03610) Hypothetical protein ZC84.1 in chromosome III|
          Length = 1416

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 730 NYIQCIASGGQPPNYKFYFYGQKAGAAAVYLVECIVNTAS 611
           N++ C    G P NY+ YF G + G        C +NT S
Sbjct: 505 NFVTCSNGMGCPANYECYFDGSQWGCCPTKAFTCSLNTDS 544

>HNF1B_PIG (Q03365) Hepatocyte nuclear factor 1-beta (HNF-1beta) (HNF-1B)|
           (Variant hepatic nuclear factor 1) (VHNF1) (FPC-binding
           protein) (FPCB)
          Length = 559

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +3

Query: 84  LLHPANKLQMSIYSLHISGGGIHLQSSNKVTHHLNHHYPEE 206
           LL P  K+Q+S+     SGGG+   S+    H L+HH P++
Sbjct: 396 LLSPDGKMQISV-----SGGGLPPVSTLTNIHSLSHHNPQQ 431

>HNF1B_MOUSE (P27889) Hepatocyte nuclear factor 1-beta (HNF-1beta) (HNF-1B)|
           (Variant hepatic nuclear factor 1) (VHNF1) (Homeoprotein
           LFB3)
          Length = 558

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 81  ALLHPANKLQMSIYSLHISGGGIHLQSSNKVTHHLNHHYPEE 206
           +LL P +K+Q+++     SGGG+   S+    H L+HH P++
Sbjct: 394 SLLSPDSKMQITV-----SGGGLPPVSTLTNIHSLSHHNPQQ 430


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,143,160
Number of Sequences: 219361
Number of extensions: 2240159
Number of successful extensions: 5263
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5260
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7592921998
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)