>ref|XM_480472.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2009

 Score =  107 bits (54), Expect = 3e-20
 Identities = 201/250 (80%)
 Strand = Plus / Minus

                                                                        
Query: 217  tgaaatatacgacgaggtagatggaaagagagaacaccgcgcagatgtgctgccagaaga 276
            ||||||||||||  ||||||||||| ||||| | |||||| || |||||||||||||| |
Sbjct: 1668 tgaaatatacgatcaggtagatggagagagatagcaccgcacaaatgtgctgccagaata 1609

                                                                        
Query: 277  ggagcgcagatgcttccttaacgctgtaacccctcaggctcgcgatcgcgccgagaagga 336
            | || || ||||||||||| ||    ||||| || |||||||| ||||| || || ||||
Sbjct: 1608 gaagtgccgatgcttccttgacagcataacctctgaggctcgcaatcgctccaagcagga 1549

                                                                        
Query: 337  tggcacttggggtggagtattgcagtgagagcacaaaccgatacatgtagtcgttctcaa 396
            ||||||| ||||||||||| || || || |||||||| || ||||||| ||| | ||| |
Sbjct: 1548 tggcactaggggtggagtactgtagcgacagcacaaagcggtacatgtggtcttcctcga 1489

                                                                        
Query: 397  cgagcaggtttaacttgtctgctagaatcacgatgccgataccaatgcacgggaggatca 456
            | ||||| |  |||   ||||| || |  ||||  ||||| |||||||||||||| ||||
Sbjct: 1488 caagcagatgcaaccgatctgccagcaggacgacaccgatgccaatgcacgggagaatca 1429

                      
Query: 457  gaagccttgc 466
            | ||||||||
Sbjct: 1428 ggagccttgc 1419

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  107 bits (54), Expect = 3e-20
 Identities = 201/250 (80%)
 Strand = Plus / Minus

                                                                           
Query: 217     tgaaatatacgacgaggtagatggaaagagagaacaccgcgcagatgtgctgccagaaga 276
               ||||||||||||  ||||||||||| ||||| | |||||| || |||||||||||||| |
Sbjct: 5318429 tgaaatatacgatcaggtagatggagagagatagcaccgcacaaatgtgctgccagaata 5318370

                                                                           
Query: 277     ggagcgcagatgcttccttaacgctgtaacccctcaggctcgcgatcgcgccgagaagga 336
               | || || ||||||||||| ||    ||||| || |||||||| ||||| || || ||||
Sbjct: 5318369 gaagtgccgatgcttccttgacagcataacctctgaggctcgcaatcgctccaagcagga 5318310

                                                                           
Query: 337     tggcacttggggtggagtattgcagtgagagcacaaaccgatacatgtagtcgttctcaa 396
               ||||||| ||||||||||| || || || |||||||| || ||||||| ||| | ||| |
Sbjct: 5318309 tggcactaggggtggagtactgtagcgacagcacaaagcggtacatgtggtcttcctcga 5318250

                                                                           
Query: 397     cgagcaggtttaacttgtctgctagaatcacgatgccgataccaatgcacgggaggatca 456
               | ||||| |  |||   ||||| || |  ||||  ||||| |||||||||||||| ||||
Sbjct: 5318249 caagcagatgcaaccgatctgccagcaggacgacaccgatgccaatgcacgggagaatca 5318190

                         
Query: 457     gaagccttgc 466
               | ||||||||
Sbjct: 5318189 ggagccttgc 5318180

>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0610E02
          Length = 135816

 Score =  107 bits (54), Expect = 3e-20
 Identities = 201/250 (80%)
 Strand = Plus / Minus

                                                                          
Query: 217    tgaaatatacgacgaggtagatggaaagagagaacaccgcgcagatgtgctgccagaaga 276
              ||||||||||||  ||||||||||| ||||| | |||||| || |||||||||||||| |
Sbjct: 110017 tgaaatatacgatcaggtagatggagagagatagcaccgcacaaatgtgctgccagaata 109958

                                                                          
Query: 277    ggagcgcagatgcttccttaacgctgtaacccctcaggctcgcgatcgcgccgagaagga 336
              | || || ||||||||||| ||    ||||| || |||||||| ||||| || || ||||
Sbjct: 109957 gaagtgccgatgcttccttgacagcataacctctgaggctcgcaatcgctccaagcagga 109898

                                                                          
Query: 337    tggcacttggggtggagtattgcagtgagagcacaaaccgatacatgtagtcgttctcaa 396
              ||||||| ||||||||||| || || || |||||||| || ||||||| ||| | ||| |
Sbjct: 109897 tggcactaggggtggagtactgtagcgacagcacaaagcggtacatgtggtcttcctcga 109838

                                                                          
Query: 397    cgagcaggtttaacttgtctgctagaatcacgatgccgataccaatgcacgggaggatca 456
              | ||||| |  |||   ||||| || |  ||||  ||||| |||||||||||||| ||||
Sbjct: 109837 caagcagatgcaaccgatctgccagcaggacgacaccgatgccaatgcacgggagaatca 109778

                        
Query: 457    gaagccttgc 466
              | ||||||||
Sbjct: 109777 ggagccttgc 109768

>gb|AY110570.1| Zea mays CL26388_1 mRNA sequence
          Length = 708

 Score =  105 bits (53), Expect = 1e-19
 Identities = 143/173 (82%)
 Strand = Plus / Plus

                                                                       
Query: 210 aacagcttgaaatatacgacgaggtagatggaaagagagaacaccgcgcagatgtgctgc 269
           |||| |||||| ||||| || |||||||  ||||||||||||||||| || || ||||||
Sbjct: 327 aacaacttgaagtatacaaccaggtagagtgaaagagagaacaccgcacaaatatgctgc 386

                                                                       
Query: 270 cagaagaggagcgcagatgcttccttaacgctgtaacccctcaggctcgcgatcgcgccg 329
           ||||| || || || ||||||||||| ||||  || || || || || |||||||| || 
Sbjct: 387 cagaacagaagggcggatgcttccttgacgccatagcctctgagactggcgatcgctcca 446

                                                                
Query: 330 agaaggatggcacttggggtggagtattgcagtgagagcacaaaccgatacat 382
           || ||||| ||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 447 agcaggatagcactcggggtggagtactgcagggagagcacaaagcggtacat 499

>dbj|AK065037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H10, full
            insert sequence
          Length = 2010

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 138/168 (82%)
 Strand = Plus / Minus

                                                                        
Query: 217  tgaaatatacgacgaggtagatggaaagagagaacaccgcgcagatgtgctgccagaaga 276
            ||||||||||||  ||||||||||| ||||| | |||||| || |||||||||||||| |
Sbjct: 1669 tgaaatatacgatcaggtagatggagagagatagcaccgcacaaatgtgctgccagaata 1610

                                                                        
Query: 277  ggagcgcagatgcttccttaacgctgtaacccctcaggctcgcgatcgcgccgagaagga 336
            | || || ||||||||||| ||    ||||| || |||||||| ||||| || || ||||
Sbjct: 1609 gaagtgccgatgcttccttgacagcataacctctgaggctcgcaatcgctccaagcagga 1550

                                                            
Query: 337  tggcacttggggtggagtattgcagtgagagcacaaaccgatacatgt 384
            ||||||  ||||||||||| || || || |||||||| || |||||||
Sbjct: 1549 tggcaccaggggtggagtactgtagcgacagcacaaagcggtacatgt 1502



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 432  ccgataccaatgcacgggaggatcagaagccttgc 466
            ||||| |||||||||||||| ||||| ||||||||
Sbjct: 1453 ccgatgccaatgcacgggagaatcaggagccttgc 1419

>gb|AC098736.4| Mus musculus BAC clone RP23-122B3 from 1, complete sequence
          Length = 211208

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 51     ataatacatgtgatagaaatac 72
              ||||||||||||||||||||||
Sbjct: 161357 ataatacatgtgatagaaatac 161378

>ref|XM_663252.1| Cryptosporidium hominis TU502 multi-pass transmembrane protein
            (Chro.60286) partial mRNA
          Length = 1968

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 47   aataataatacatgtgatagaa 68
            ||||||||||||||||||||||
Sbjct: 1333 aataataatacatgtgatagaa 1354

>emb|BX538351.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 2/4
          Length = 307050

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 47     aataataatacatgtgatagaa 68
              ||||||||||||||||||||||
Sbjct: 144105 aataataatacatgtgatagaa 144084

>gb|AC090763.7| Homo sapiens chromosome 15, clone RP11-408F10, complete sequence
          Length = 149304

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 49    taataatacatgtgatagaaatacaa 74
             ||||||||||||||||| ||||||||
Sbjct: 61544 taataatacatgtgatataaatacaa 61519

>ref|XM_627602.1| Cryptosporidium parvum Iowa II thioredoxin (quiescin Q6 like) having
            signal peptide and 12 transmembrane domains (cgd6_2470),
            partial mRNA
          Length = 1968

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 47   aataataatacatgtgatagaa 68
            ||||||||||||||||||||||
Sbjct: 1333 aataataatacatgtgatagaa 1354

>ref|NM_191546.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 266 ctgccagaagaggagcgcagatgct 290
           |||| ||||||||||||||||||||
Sbjct: 96  ctgcaagaagaggagcgcagatgct 120

>emb|AJ550753.1|MGR550753 Megacorax gracielana partial pgiCa gene for cytosolic
           phosphoglucose isomerase, exons 14-21
          Length = 2367

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 65  agaaatacaatcactagcaaa 85
           |||||||||||||||||||||
Sbjct: 190 agaaatacaatcactagcaaa 170

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 266      ctgccagaagaggagcgcagatgct 290
                |||| ||||||||||||||||||||
Sbjct: 30554829 ctgcaagaagaggagcgcagatgct 30554853

>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0036G09
          Length = 124118

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 266   ctgccagaagaggagcgcagatgct 290
             |||| ||||||||||||||||||||
Sbjct: 37433 ctgcaagaagaggagcgcagatgct 37457

>dbj|AP000775.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-708B6, complete
             sequence
          Length = 189955

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 106   acaaggaggcatggctgagaa 126
             |||||||||||||||||||||
Sbjct: 20778 acaaggaggcatggctgagaa 20798

>emb|AL844218.7| Mouse DNA sequence from clone RP23-409B1 on chromosome 4, complete
              sequence
          Length = 197419

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    aggaggcatggctgagaattc 129
              |||||||||||||||||||||
Sbjct: 112041 aggaggcatggctgagaattc 112061

>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002A19,
              complete sequence
          Length = 139052

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     tagcaaattatgatacacttctta 102
              ||||||||||||| ||||||||||
Sbjct: 127503 tagcaaattatgacacacttctta 127526

>gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002B02, complete sequence
          Length = 148881

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    tagcaaattatgatacacttctta 102
             ||||||||||||| ||||||||||
Sbjct: 27319 tagcaaattatgacacacttctta 27342

>gb|AC124458.5| Mus musculus BAC clone RP24-136E11 from chromosome 12, complete sequence
          Length = 168181

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    aggcatggctgagaattcat 131
              ||||||||||||||||||||
Sbjct: 118875 aggcatggctgagaattcat 118856

>gb|AC018684.3| Homo sapiens BAC clone RP11-424H16 from 10, complete sequence
          Length = 175968

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     catgtgatagaaatacaatc 76
              ||||||||||||||||||||
Sbjct: 124377 catgtgatagaaatacaatc 124358

>emb|BX511248.7| Zebrafish DNA sequence from clone CH211-173N20 in linkage group 5,
              complete sequence
          Length = 142117

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     aataataatacatgtgatag 66
              ||||||||||||||||||||
Sbjct: 138307 aataataatacatgtgatag 138288

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 79       tagcaaattatgatacacttctta 102
                ||||||||||||| ||||||||||
Sbjct: 17968530 tagcaaattatgacacacttctta 17968553

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 79       tagcaaattatgatacacttctta 102
                ||||||||||||| ||||||||||
Sbjct: 18060628 tagcaaattatgacacacttctta 18060651

>emb|CR847961.12| Zebrafish DNA sequence from clone DKEY-154B7 in linkage group 5,
             complete sequence
          Length = 237051

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 66    gaaatacaatcactagcaaattat 89
             |||||||||||||||||| |||||
Sbjct: 23230 gaaatacaatcactagcacattat 23253


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,860,319
Number of Sequences: 3902068
Number of extensions: 3860319
Number of successful extensions: 61239
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61119
Number of HSP's gapped (non-prelim): 116
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)