ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104985.1| Zea mays PCO095939 mRNA sequence 123 8e-25
2ref|XM_483606.1| Oryza sativa (japonica cultivar-group), mRNA 121 3e-24
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
5dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
6dbj|AK101733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
7dbj|AK066525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
8gb|BT019236.1| Zea mays clone Contig909.F mRNA sequence 107 5e-20
9gb|AY106756.1| Zea mays PCO095940 mRNA sequence 107 5e-20
10gb|AC091953.3| Homo sapiens chromosome 5 clone RP11-417J1, compl... 42 2.5
11gb|AC002087.1|HSAC002087 Human BAC clone GS1-113D4 from 5p15.2, ... 42 2.5
12gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 40 9.7
13gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N... 40 9.7
14gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2,... 40 9.7
15gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, c... 40 9.7
16gb|AF295017.4| Homo sapiens chromosome 8 clone RP11-532M24 map q... 40 9.7
17gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, co... 40 9.7
18gb|AC137556.3| Mus musculus BAC clone RP24-325M3 from chromosome... 40 9.7
19gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosom... 40 9.7
20gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4... 40 9.7
21emb|AL162402.19| Human DNA sequence from clone RP5-1054K23 on ch... 40 9.7
22emb|AL161902.12| Human DNA sequence from clone RP11-66B8 on chro... 40 9.7
23emb|AL158140.9| Human DNA sequence from clone RP11-217H19 on chr... 40 9.7
24emb|AL157821.14| Human DNA sequence from clone RP11-93M14 on chr... 40 9.7
25emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 9.7
26gb|AC092904.7| Homo sapiens 3 BAC RP11-675I21 (Roswell Park Canc... 40 9.7
27gb|AC104416.7| Homo sapiens chromosome 8, clone CTD-3015P10, com... 40 9.7
28ref|XM_695069.1| PREDICTED: Danio rerio similar to cyclin fold p... 40 9.7
29gb|AC090922.4| Homo sapiens chromosome 8, clone RP11-532M24, com... 40 9.7
30gb|AC010374.6| Homo sapiens chromosome 5 clone CTD-2057J6, compl... 40 9.7
31gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 9.7
32gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C... 40 9.7
33gb|AC108016.5| Homo sapiens BAC clone RP13-1015A13 from 4, compl... 40 9.7
34gb|AC092608.2| Homo sapiens BAC clone RP11-154F14 from 4, comple... 40 9.7
35gb|AC104790.4| Homo sapiens BAC clone RP11-167A8 from 4, complet... 40 9.7
36gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cance... 40 9.7
37gb|AC157998.2| Mus musculus BAC clone RP23-27L18 from chromosome... 40 9.7
38gb|AC017014.4| Homo sapiens BAC clone RP11-142D10 from 2, comple... 40 9.7
39gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9... 40 9.7
40gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, com... 40 9.7
41dbj|BS000175.1| Pan troglodytes chromosome 22 clone:PTB-091H17, ... 40 9.7
42dbj|BS000174.1| Pan troglodytes chromosome 22 clone:PTB-137B16, ... 40 9.7
43emb|AL118559.6|CNS01DRU Human chromosome 14 DNA sequence BAC R-6... 40 9.7
44emb|AL929039.7| Zebrafish DNA sequence from clone DKEY-245I6, co... 40 9.7
45gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p... 40 9.7
46gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3... 40 9.7 
>gb|AY104985.1| Zea mays PCO095939 mRNA sequence
          Length = 928

 Score =  123 bits (62), Expect = 8e-25
 Identities = 113/130 (86%)
 Strand = Plus / Minus

                                                                       
Query: 536 agccatttccaggtggcattgaatttgaagatctggaatcaacaacaggccctctctttt 595
           ||||||||||||   | |||| |||||| ||||||||||||||  |||| || |||||||
Sbjct: 470 agccatttccagaaagaattgcatttgatgatctggaatcaactgcagggcccctctttt 411

                                                                       
Query: 596 gccgagtgatgtgtgccacaggagtaacagcaactgaaggcagcaacgatgagtaagaag 655
           |||||||| | ||||||||||||||||||||||| |||||||| || ||||||||||  |
Sbjct: 410 gccgagtgctttgtgccacaggagtaacagcaacagaaggcagtaaggatgagtaagggg 351

                     
Query: 656 cagaagatgc 665
           ||||||||||
Sbjct: 350 cagaagatgc 341
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>ref|XM_483606.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3172

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                        
Query: 511  tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 570
            |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 2529 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 2470

                                                                        
Query: 571  gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 630
            |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 2469 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 2410

                 
Query: 631  gaagg 635
            |||||
Sbjct: 2409 gaagg 2405



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 463  gatgaatgcccagctcgaacttcatcagaaaagccattc 501
            ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 2676 gatgactgcccaggtcgaacttcatctgaaaagccattc 2638



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 323  atcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccat 382
            ||||||| ||| ||||| ||| ||| | ||| || ||||||||||| || ||||||||||
Sbjct: 2804 atcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccat 2745

                  
Query: 383  gtctgg 388
            | ||||
Sbjct: 2744 gcctgg 2739



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 78   ggttgcaaaacttcctcggtatttt 102
            ||||||||||||||||| |||||||
Sbjct: 3037 ggttgcaaaacttcctcagtatttt 3013
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                            
Query: 511      tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 570
                |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 27204548 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 27204607

                                                                            
Query: 571      gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 630
                |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 27204608 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 27204667

                     
Query: 631      gaagg 635
                |||||
Sbjct: 27204668 gaagg 27204672



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 463      gatgaatgcccagctcgaacttcatcagaaaagccattc 501
                ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 27204401 gatgactgcccaggtcgaacttcatctgaaaagccattc 27204439



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 78       ggttgcaaaacttcctcggtatttt 102
                ||||||||||||||||| |||||||
Sbjct: 27203334 ggttgcaaaacttcctcagtatttt 27203358
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>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1521_G02
          Length = 117964

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                          
Query: 511    tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 570
              |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 105581 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 105640

                                                                          
Query: 571    gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 630
              |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 105641 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 105700

                   
Query: 631    gaagg 635
              |||||
Sbjct: 105701 gaagg 105705



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 463    gatgaatgcccagctcgaacttcatcagaaaagccattc 501
              ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 105434 gatgactgcccaggtcgaacttcatctgaaaagccattc 105472



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 78     ggttgcaaaacttcctcggtatttt 102
              ||||||||||||||||| |||||||
Sbjct: 104367 ggttgcaaaacttcctcagtatttt 104391
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>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0623F08
          Length = 154540

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                         
Query: 511   tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 570
             |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 27751 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 27810

                                                                         
Query: 571   gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 630
             |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 27811 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 27870

                  
Query: 631   gaagg 635
             |||||
Sbjct: 27871 gaagg 27875



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 463   gatgaatgcccagctcgaacttcatcagaaaagccattc 501
             ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 27604 gatgactgcccaggtcgaacttcatctgaaaagccattc 27642



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 78    ggttgcaaaacttcctcggtatttt 102
             ||||||||||||||||| |||||||
Sbjct: 26537 ggttgcaaaacttcctcagtatttt 26561
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>dbj|AK101733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061H08, full
            insert sequence
          Length = 1855

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                        
Query: 511  tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 570
            |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 1347 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 1288

                                                                        
Query: 571  gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 630
            |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 1287 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 1228

                 
Query: 631  gaagg 635
            |||||
Sbjct: 1227 gaagg 1223



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 463  gatgaatgcccagctcgaacttcatcagaaaagccattc 501
            ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 1494 gatgactgcccaggtcgaacttcatctgaaaagccattc 1456



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 323  atcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccat 382
            ||||||| ||| ||||| ||| ||| | ||| || ||||||||||| || ||||||||||
Sbjct: 1622 atcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccat 1563

                  
Query: 383  gtctgg 388
            | ||||
Sbjct: 1562 gcctgg 1557



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 78   ggttgcaaaacttcctcggtatttt 102
            ||||||||||||||||| |||||||
Sbjct: 1855 ggttgcaaaacttcctcagtatttt 1831
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>dbj|AK066525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072L17, full
            insert sequence
          Length = 3173

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                        
Query: 511  tgatctccaaatttagctgcagtagagccatttccaggtggcattgaatttgaagatctg 570
            |||||||||||  |||| |  ||||| ||||||| || |||||||  |||||||||||||
Sbjct: 2529 tgatctccaaagctagcagtggtagacccatttctagatggcattacatttgaagatctg 2470

                                                                        
Query: 571  gaatcaacaacaggccctctcttttgccgagtgatgtgtgccacaggagtaacagcaact 630
            |||||||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||||
Sbjct: 2469 gaatcaacaacaggtcctctcttttgcctagtgctttgtgccacgggagtgacagcaact 2410

                 
Query: 631  gaagg 635
            |||||
Sbjct: 2409 gaagg 2405



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 463  gatgaatgcccagctcgaacttcatcagaaaagccattc 501
            ||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 2676 gatgactgcccaggtcgaacttcatctgaaaagccattc 2638



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 323  atcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccat 382
            ||||||| ||| ||||| ||| ||| | ||| || ||||||||||| || ||||||||||
Sbjct: 2804 atcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccat 2745

                  
Query: 383  gtctgg 388
            | ||||
Sbjct: 2744 gcctgg 2739



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 78   ggttgcaaaacttcctcggtatttt 102
            ||||||||||||||||| |||||||
Sbjct: 3037 ggttgcaaaacttcctcagtatttt 3013
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>gb|BT019236.1| Zea mays clone Contig909.F mRNA sequence
          Length = 1329

 Score =  107 bits (54), Expect = 5e-20
 Identities = 111/130 (85%)
 Strand = Plus / Plus

                                                                       
Query: 536 agccatttccaggtggcattgaatttgaagatctggaatcaacaacaggccctctctttt 595
           |||| |||||||  || |||| |||||| ||||||||||||||  | ||||  |||||||
Sbjct: 520 agccgtttccagagggaattgcatttgatgatctggaatcaactgcgggcctcctctttt 579

                                                                       
Query: 596 gccgagtgatgtgtgccacaggagtaacagcaactgaaggcagcaacgatgagtaagaag 655
           |||||||  | ||||||||||||||||| ||||| |||||||| || ||||||||||| |
Sbjct: 580 gccgagtattttgtgccacaggagtaacggcaacagaaggcagtaaggatgagtaagagg 639

                     
Query: 656 cagaagatgc 665
           ||||||||||
Sbjct: 640 cagaagatgc 649



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 358 ccctgttgctttcctccataaccatgtctgg 388
           |||||||| ||||| ||||||||||||||||
Sbjct: 321 ccctgttgttttccaccataaccatgtctgg 351
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>gb|AY106756.1| Zea mays PCO095940 mRNA sequence
          Length = 974

 Score =  107 bits (54), Expect = 5e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                       
Query: 536 agccatttccaggtggcattgaatttgaagatctggaatcaacaacaggccctctctttt 595
           |||| |||||||  || |||| |||||| ||||||||||||||  | ||||  |||||||
Sbjct: 377 agccgtttccagagggaattgcatttgatgatctggaatcaactgcgggcctcctctttt 318

                                                                       
Query: 596 gccgagtgatgtgtgccacaggagtaacagcaactgaaggcagcaacgatgagtaagaag 655
           |||||||  | ||||||||||||||||| ||||| |||||||| || ||||||||||| |
Sbjct: 317 gccgagtattttgtgccacaggagtaacggcaacagaaggcagtaaggatgagtaagagg 258

                     
Query: 656 cagaagatgc 665
           ||||||||||
Sbjct: 257 cagaagatgc 248



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 358 ccctgttgctttcctccataaccatgtctgg 388
           |||||||| ||||| ||||||||||||||||
Sbjct: 576 ccctgttgttttccaccataaccatgtctgg 546
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>gb|AC091953.3| Homo sapiens chromosome 5 clone RP11-417J1, complete sequence
          Length = 172738

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 504    ttggttttgatctccaaattt 524
              |||||||||||||||||||||
Sbjct: 129791 ttggttttgatctccaaattt 129811
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>gb|AC002087.1|HSAC002087 Human BAC clone GS1-113D4 from 5p15.2, complete sequence
          Length = 154028

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 504    ttggttttgatctccaaattt 524
              |||||||||||||||||||||
Sbjct: 107539 ttggttttgatctccaaattt 107559
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>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 137     caaaataaggtaaagagcag 156
               ||||||||||||||||||||
Sbjct: 1716183 caaaataaggtaaagagcag 1716202
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>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence
          Length = 114057

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   caaaataaggtaaagagcag 156
             ||||||||||||||||||||
Sbjct: 37240 caaaataaggtaaagagcag 37259
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>gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2, complete sequence
          Length = 134290

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    caaaataaggtaaagagcag 156
              ||||||||||||||||||||
Sbjct: 132487 caaaataaggtaaagagcag 132506
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>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence
          Length = 183993

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   aggcactgttataaaagcaa 186
             ||||||||||||||||||||
Sbjct: 71254 aggcactgttataaaagcaa 71273
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>gb|AF295017.4| Homo sapiens chromosome 8 clone RP11-532M24 map q24.13, complete
             sequence
          Length = 207084

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 540   atttccaggtggcattgaat 559
             ||||||||||||||||||||
Sbjct: 58900 atttccaggtggcattgaat 58881
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>gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, complete sequence
          Length = 246043

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 481  acttcatcagaaaagccatt 500
            ||||||||||||||||||||
Sbjct: 6641 acttcatcagaaaagccatt 6660
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>gb|AC137556.3| Mus musculus BAC clone RP24-325M3 from chromosome 9, complete sequence
          Length = 170884

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     taagccacaggcattcaaca 48
              ||||||||||||||||||||
Sbjct: 167255 taagccacaggcattcaaca 167274
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>gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosome 6, complete sequence
          Length = 130679

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    tcttcagccatttgaaacca 240
              ||||||||||||||||||||
Sbjct: 116208 tcttcagccatttgaaacca 116227
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>gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete
              sequence
          Length = 251448

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    gtgcacaaattttgaataat 208
              ||||||||||||||||||||
Sbjct: 227852 gtgcacaaattttgaataat 227833
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>emb|AL162402.19| Human DNA sequence from clone RP5-1054K23 on chromosome 1p13.3-21.1,
             complete sequence
          Length = 80743

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aagccacaggcattcaacac 49
             ||||||||||||||||||||
Sbjct: 35648 aagccacaggcattcaacac 35629
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>emb|AL161902.12| Human DNA sequence from clone RP11-66B8 on chromosome 13 Contains part
             of the NBEA gene for neurobeachin (BCL8B FLJ10197
             KIAA1544) and a novel gene, complete sequence
          Length = 105537

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aagccacaggcattcaacac 49
             ||||||||||||||||||||
Sbjct: 18278 aagccacaggcattcaacac 18259
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>emb|AL158140.9| Human DNA sequence from clone RP11-217H19 on chromosome Xq13.3-21.2
             Contains the 3' end of a novel pseudogene, complete
             sequence
          Length = 94862

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aagccacaggcattcaacac 49
             ||||||||||||||||||||
Sbjct: 45483 aagccacaggcattcaacac 45502
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>emb|AL157821.14| Human DNA sequence from clone RP11-93M14 on chromosome 13 Contains part
              of the GPC5 gene for glypican 5, complete sequence
          Length = 138781

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 497    cattcacttggttttgatctccaa 520
              |||| |||||||||||||||||||
Sbjct: 100559 cattaacttggttttgatctccaa 100582
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 587    ctctcttttgccgagtgatg 606
              ||||||||||||||||||||
Sbjct: 583056 ctctcttttgccgagtgatg 583037
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>gb|AC092904.7| Homo sapiens 3 BAC RP11-675I21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 129641

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     aagccacaggcattcaacac 49
              ||||||||||||||||||||
Sbjct: 112829 aagccacaggcattcaacac 112810
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>gb|AC104416.7| Homo sapiens chromosome 8, clone CTD-3015P10, complete sequence
          Length = 172029

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 238   ccaaaactcagccaacttgacatg 261
             ||||||||||| ||||||||||||
Sbjct: 34475 ccaaaactcagtcaacttgacatg 34452
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>ref|XM_695069.1| PREDICTED: Danio rerio similar to cyclin fold protein 1
           (LOC571475), partial mRNA
          Length = 438

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 ccaactcgttcatgtcttcc 437
           ||||||||||||||||||||
Sbjct: 286 ccaactcgttcatgtcttcc 267
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>gb|AC090922.4| Homo sapiens chromosome 8, clone RP11-532M24, complete sequence
          Length = 207069

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 540   atttccaggtggcattgaat 559
             ||||||||||||||||||||
Sbjct: 58904 atttccaggtggcattgaat 58885
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>gb|AC010374.6| Homo sapiens chromosome 5 clone CTD-2057J6, complete sequence
          Length = 117372

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tcagccaacttgacatgatt 264
             ||||||||||||||||||||
Sbjct: 86544 tcagccaacttgacatgatt 86525
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 230     atttgaaaccaaaactcagccaacttga 257
               |||||||||||||| |||||||| ||||
Sbjct: 1851725 atttgaaaccaaaagtcagccaatttga 1851698
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>gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C12 map 3p, complete sequence
          Length = 185608

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   atttgaaaccaaaactcagc 249
             ||||||||||||||||||||
Sbjct: 64354 atttgaaaccaaaactcagc 64373
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>gb|AC108016.5| Homo sapiens BAC clone RP13-1015A13 from 4, complete sequence
          Length = 162715

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 215   agcagatcttcagccatttgaaac 238
             ||||||||||||| ||||||||||
Sbjct: 65361 agcagatcttcaggcatttgaaac 65338
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>gb|AC092608.2| Homo sapiens BAC clone RP11-154F14 from 4, complete sequence
          Length = 196952

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    caaattttgaataatgaatt 213
              ||||||||||||||||||||
Sbjct: 131376 caaattttgaataatgaatt 131357
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>gb|AC104790.4| Homo sapiens BAC clone RP11-167A8 from 4, complete sequence
          Length = 123589

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     aagccacaggcattcaacac 49
              ||||||||||||||||||||
Sbjct: 108675 aagccacaggcattcaacac 108694
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>gb|AC159138.6| Mus musculus  BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 180124

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tcttcagccatttgaaacca 240
             ||||||||||||||||||||
Sbjct: 63937 tcttcagccatttgaaacca 63956
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>gb|AC157998.2| Mus musculus BAC clone RP23-27L18 from chromosome 9, complete sequence
          Length = 253762

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     taagccacaggcattcaaca 48
              ||||||||||||||||||||
Sbjct: 156188 taagccacaggcattcaaca 156169
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>gb|AC017014.4| Homo sapiens BAC clone RP11-142D10 from 2, complete sequence
          Length = 182366

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tcctcggtatttttctgatt 109
             ||||||||||||||||||||
Sbjct: 43841 tcctcggtatttttctgatt 43822
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>gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9, complete sequence
          Length = 160378

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    gttcatgtcttcccccattg 444
              ||||||||||||||||||||
Sbjct: 143912 gttcatgtcttcccccattg 143893
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>gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, complete sequence
          Length = 177482

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 481    acttcatcagaaaagccatt 500
              ||||||||||||||||||||
Sbjct: 104412 acttcatcagaaaagccatt 104431
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>dbj|BS000175.1| Pan troglodytes chromosome 22 clone:PTB-091H17, map 22, complete
             sequences
          Length = 183155

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aagccacaggcattcaacac 49
             ||||||||||||||||||||
Sbjct: 26169 aagccacaggcattcaacac 26188
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>dbj|BS000174.1| Pan troglodytes chromosome 22 clone:PTB-137B16, map 22, complete
              sequences
          Length = 193756

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     aagccacaggcattcaacac 49
              ||||||||||||||||||||
Sbjct: 183966 aagccacaggcattcaacac 183985
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>emb|AL118559.6|CNS01DRU Human chromosome 14 DNA sequence BAC R-618B21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 206722

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aagccacaggcattcaacac 49
             ||||||||||||||||||||
Sbjct: 98364 aagccacaggcattcaacac 98383
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>emb|AL929039.7| Zebrafish DNA sequence from clone DKEY-245I6, complete sequence
          Length = 162385

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    ttttgaataatgaattcagc 217
              ||||||||||||||||||||
Sbjct: 129191 ttttgaataatgaattcagc 129210
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>gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p, complete sequence
          Length = 166049

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   atttgaaaccaaaactcagc 249
             ||||||||||||||||||||
Sbjct: 20096 atttgaaaccaaaactcagc 20115
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>gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3p, complete sequence
          Length = 150810

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   atttgaaaccaaaactcagc 249
             ||||||||||||||||||||
Sbjct: 18454 atttgaaaccaaaactcagc 18435


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,404,464
Number of Sequences: 3902068
Number of extensions: 6404464
Number of successful extensions: 121033
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120845
Number of HSP's gapped (non-prelim): 188
length of query: 709
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 686
effective length of database: 17,143,297,704
effective search space: 11760302224944
effective search space used: 11760302224944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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