| Clone Name | rbags38g14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form ... | 30 | 4.2 | 2 | HSF_SCHPO (Q02953) Heat shock factor protein (HSF) (Heat shock t... | 29 | 9.5 |
|---|
>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]| Length = 2559 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -1 Query: 230 GSMLCRRGWFLKFLGFTTILAVLCISSFSLFVACVLLHNTEVLN 99 G LC GW +F T++ +CI + S+ C + +NT V N Sbjct: 2036 GQCLCEAGWTGRFCDAPTVVIPVCIPACSMHATC-MENNTCVCN 2078
>HSF_SCHPO (Q02953) Heat shock factor protein (HSF) (Heat shock transcription| factor) (HSTF) Length = 609 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = -3 Query: 282 SQDPLIRLQFHGDD*ILRFYVVS*RLVLEVSWFHHNFSSFVYQL 151 S D LIR GD ++ + +LVL + H+NFSSFV QL Sbjct: 65 STDSLIRWSDRGDSFLVIGHEDFAKLVLPRYFKHNNFSSFVRQL 108 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,675,419 Number of Sequences: 219361 Number of extensions: 1479260 Number of successful extensions: 2875 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2807 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2875 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)