ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38g14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
3ref|XM_474404.1| Oryza sativa (japonica cultivar-group), predic... 58 4e-05
4dbj|AK105871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
5dbj|AK071538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
6emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 58 4e-05
7dbj|AK106642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
8ref|XM_456252.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F26312g ... 42 2.1
9emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 2.1
10gb|AC073856.17| Homo sapiens 3 BAC RP11-938G16 (Roswell Park Can... 42 2.1
11gb|AC022399.15| Homo sapiens chromosome 10 clone RP11-4G18, comp... 42 2.1
12gb|AC080106.6| Homo sapiens chromosome 11, clone RP11-62J13, com... 42 2.1
13emb|BX682558.6| Zebrafish DNA sequence from clone DKEY-225F5 in ... 42 2.1
14dbj|AP000893.5| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.1
15dbj|AP001646.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.1
16gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome... 40 8.3
17gb|AC168021.4| Mus musculus BAC clone CH25-320O8 from chromosome... 40 8.3
18gb|AC129310.6| Mus musculus BAC clone RP24-348D18 from chromosom... 40 8.3
19gb|AC111012.3| Mus musculus BAC clone RP24-146N3 from 8, complet... 40 8.3
20gb|AC121950.2| Mus musculus BAC clone RP24-216M19 from 6, comple... 40 8.3
21emb|AL138893.5| Human DNA sequence from clone RP11-159L16 on chr... 40 8.3
22gb|AC087293.5| Homo sapiens chromosome 11, clone RP11-657D12, co... 40 8.3
23gb|AC019026.12| Mus musculus chromosome 6 clone RP23-188E5 strai... 40 8.3
24dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 8.3
25gb|AC100769.2| Homo sapiens chromosome 11, clone RP11-701P23, co... 40 8.3
26gb|AC008677.5| Homo sapiens chromosome 5 clone CTB-47B8, complet... 40 8.3
27ref|XM_680045.1| PREDICTED: Danio rerio similar to PX domain con... 40 8.3
28dbj|AK040318.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 8.3
29emb|BX465854.7| Zebrafish DNA sequence from clone DKEY-208M10 in... 40 8.3
30emb|BX465192.7| Zebrafish DNA sequence from clone CH211-202P4 in... 40 8.3
31gb|AF217843.1|AF217843 Penaeus monodon, complete mitochondrial g... 40 8.3
32emb|AL844869.5| Mouse DNA sequence from clone RP23-437K18 on chr... 40 8.3
33emb|AL929096.5| Zebrafish DNA sequence from clone DKEY-216E9 in ... 40 8.3
34gb|AC157091.6| Mus musculus 6 BAC RP24-359O2 (Roswell Park Cance... 40 8.3
35emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in... 40 8.3
36gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complet... 40 8.3 
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
              complete sequence
          Length = 148023

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                          
Query: 245    tcaccgtggaactgtaaacgaatcaacggatcctggcttagcacgccatctgccaaaaaa 304
              |||||||| ||| || || ||||| | |||| | |||||||||| ||| | || ||||||
Sbjct: 136833 tcaccgtgaaaccgtgaatgaatcgagggatgcaggcttagcactccaccggctaaaaaa 136774

                                                                     
Query: 305    tggggcctttctaagaagctcaagcatctgctagtactcacaagccatatcctgc 359
              ||| ||||| || |||||||||||  |||||| ||| |||  |||||||||||||
Sbjct: 136773 tggagccttcctgagaagctcaagtgtctgctggtattcatgagccatatcctgc 136719



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 539    gatggaactttgtgactaatggatgttcaa 568
              ||||||||||| ||||||||||||||||||
Sbjct: 136556 gatggaactttttgactaatggatgttcaa 136527
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                            
Query: 245      tcaccgtggaactgtaaacgaatcaacggatcctggcttagcacgccatctgccaaaaaa 304
                |||||||| ||| || || ||||| | |||| | |||||||||| ||| | || ||||||
Sbjct: 34930720 tcaccgtgaaaccgtgaatgaatcgagggatgcaggcttagcactccaccggctaaaaaa 34930661

                                                                       
Query: 305      tggggcctttctaagaagctcaagcatctgctagtactcacaagccatatcctgc 359
                ||| ||||| || |||||||||||  |||||| ||| |||  |||||||||||||
Sbjct: 34930660 tggagccttcctgagaagctcaagtgtctgctggtattcatgagccatatcctgc 34930606



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 539      gatggaactttgtgactaatggatgttcaa 568
                ||||||||||| ||||||||||||||||||
Sbjct: 34930443 gatggaactttttgactaatggatgttcaa 34930414
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>ref|XM_474404.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1116

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                        
Query: 245  tcaccgtggaactgtaaacgaatcaacggatcctggcttagcacgccatctgccaaaaaa 304
            |||||||| ||| || || ||||| | |||| | |||||||||| ||| | || ||||||
Sbjct: 1116 tcaccgtgaaaccgtgaatgaatcgagggatgcaggcttagcactccaccggctaaaaaa 1057

                                                                 
Query: 305  tggggcctttctaagaagctcaagcatctgctagtactcacaagccatatcct 357
            ||| ||||| || |||||||||||  |||||| ||| |||  |||||||||||
Sbjct: 1056 tggagccttcctgagaagctcaagtgtctgctggtattcatgagccatatcct 1004



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 539 gatggaactttgtgactaatggatgttcaa 568
           ||||||||||| ||||||||||||||||||
Sbjct: 976 gatggaactttttgactaatggatgttcaa 947
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>dbj|AK105871.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B01, full
            insert sequence
          Length = 1666

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                        
Query: 245  tcaccgtggaactgtaaacgaatcaacggatcctggcttagcacgccatctgccaaaaaa 304
            |||||||| ||| || || ||||| | |||| | |||||||||| ||| | || ||||||
Sbjct: 1414 tcaccgtgaaaccgtgaatgaatcgagggatgcaggcttagcactccaccggctaaaaaa 1355

                                                                 
Query: 305  tggggcctttctaagaagctcaagcatctgctagtactcacaagccatatcct 357
            ||| ||||| || |||||||||||  |||||| ||| |||  |||||||||||
Sbjct: 1354 tggagccttcctgagaagctcaagtgtctgctggtattcatgagccatatcct 1302



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 539  gatggaactttgtgactaatggatgttcaa 568
            ||||||||||| ||||||||||||||||||
Sbjct: 1274 gatggaactttttgactaatggatgttcaa 1245
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>dbj|AK071538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099G11, full
            insert sequence
          Length = 1384

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                        
Query: 245  tcaccgtggaactgtaaacgaatcaacggatcctggcttagcacgccatctgccaaaaaa 304
            |||||||| ||| || || ||||| | |||| | |||||||||| ||| | || ||||||
Sbjct: 1155 tcaccgtgaaaccgtgaatgaatcgagggatgcaggcttagcactccaccggctaaaaaa 1096

                                                                 
Query: 305  tggggcctttctaagaagctcaagcatctgctagtactcacaagccatatcct 357
            ||| ||||| || |||||||||||  |||||| ||| |||  |||||||||||
Sbjct: 1095 tggagccttcctgagaagctcaagtgtctgctggtattcatgagccatatcct 1043



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 539  gatggaactttgtgactaatggatgttcaa 568
            ||||||||||| ||||||||||||||||||
Sbjct: 1015 gatggaactttttgactaatggatgttcaa 986
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>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete
             sequence
          Length = 84361

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 299   aaaaaatggggcctttctaagaagctcaagcatctgctagtactcacaagccatatcctg 358
             ||||||||| ||||| ||||||||||||||  |||||| ||| |||  ||||||||||||
Sbjct: 34637 aaaaaatggagccttcctaagaagctcaagtgtctgctggtattcatgagccatatcctg 34578

              
Query: 359   c 359
             |
Sbjct: 34577 c 34577



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 540   atggaactttgtgactaatggatgttcaa 568
             |||||||||| ||| ||||||||||||||
Sbjct: 34373 atggaactttttgattaatggatgttcaa 34345
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>dbj|AK106642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E06, full
            insert sequence
          Length = 2214

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                        
Query: 279  ggcttagcacgccatctgccaaaaaatggggcctttctaagaagctcaagcatctgctag 338
            |||||||||| ||| | || ||||||||| ||||| || |||||||||||  |||||| |
Sbjct: 1293 ggcttagcaccccaccggctaaaaaatggagccttcctgagaagctcaagtgtctgctgg 1234

                               
Query: 339  tactcacaagccatatcct 357
            || |||  |||||||||||
Sbjct: 1233 tattcatgagccatatcct 1215



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 539  gatggaactttgtgactaatggatgttcaa 568
            ||||||||||| ||||||||||||||||||
Sbjct: 1187 gatggaactttttgactaatggatgttcaa 1158
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>ref|XM_456252.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F26312g predicted mRNA
          Length = 906

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 184 aaaccaagaaacttcaagaac 204
           |||||||||||||||||||||
Sbjct: 572 aaaccaagaaacttcaagaac 592
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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 184     aaaccaagaaacttcaagaac 204
               |||||||||||||||||||||
Sbjct: 2439411 aaaccaagaaacttcaagaac 2439431
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>gb|AC073856.17| Homo sapiens 3 BAC RP11-938G16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177363

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     caaacatcatagggctttata 77
              |||||||||||||||||||||
Sbjct: 157135 caaacatcatagggctttata 157155
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>gb|AC022399.15| Homo sapiens chromosome 10 clone RP11-4G18, complete sequence
          Length = 173064

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   aaacttcaagaaccagcctct 212
             |||||||||||||||||||||
Sbjct: 58581 aaacttcaagaaccagcctct 58601
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>gb|AC080106.6| Homo sapiens chromosome 11, clone RP11-62J13, complete sequence
          Length = 157637

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   aaacttcaagaaccagcctct 212
             |||||||||||||||||||||
Sbjct: 31983 aaacttcaagaaccagcctct 32003
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>emb|BX682558.6| Zebrafish DNA sequence from clone DKEY-225F5 in linkage group 3,
             complete sequence
          Length = 146807

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    acaggctatcactgttcaaaa 106
             |||||||||||||||||||||
Sbjct: 32419 acaggctatcactgttcaaaa 32399
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>dbj|AP000893.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-659G9, complete
             sequence
          Length = 198024

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   aaacttcaagaaccagcctct 212
             |||||||||||||||||||||
Sbjct: 58579 aaacttcaagaaccagcctct 58599
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>dbj|AP001646.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-718B12, complete
              sequence
          Length = 182329

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 192    aaacttcaagaaccagcctct 212
              |||||||||||||||||||||
Sbjct: 151337 aaacttcaagaaccagcctct 151357
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>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence
          Length = 212930

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    attaaaaaccatacagtata 498
              ||||||||||||||||||||
Sbjct: 116463 attaaaaaccatacagtata 116482
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>gb|AC168021.4| Mus musculus BAC clone CH25-320O8 from chromosome 9, complete sequence
          Length = 96013

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   aaatcatttaatgtaatcta 444
             ||||||||||||||||||||
Sbjct: 56719 aaatcatttaatgtaatcta 56738
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>gb|AC129310.6| Mus musculus BAC clone RP24-348D18 from chromosome 8, complete sequence
          Length = 130946

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gcacacatgctacaaataag 144
             ||||||||||||||||||||
Sbjct: 54979 gcacacatgctacaaataag 54960
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>gb|AC111012.3| Mus musculus BAC clone RP24-146N3 from 8, complete sequence
          Length = 155637

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gcacacatgctacaaataag 144
             ||||||||||||||||||||
Sbjct: 10896 gcacacatgctacaaataag 10877
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>gb|AC121950.2| Mus musculus BAC clone RP24-216M19 from 6, complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gcctttctaagaagctcaag 328
             ||||||||||||||||||||
Sbjct: 91225 gcctttctaagaagctcaag 91206
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>emb|AL138893.5| Human DNA sequence from clone RP11-159L16 on chromosome 9p21.1-21.3,
             complete sequence
          Length = 157039

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    tatcactgttcaaaacttca 111
             ||||||||||||||||||||
Sbjct: 85117 tatcactgttcaaaacttca 85098
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>gb|AC087293.5| Homo sapiens chromosome 11, clone RP11-657D12, complete sequence
          Length = 154644

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 466    atccatctgagtaattaaaaaccataca 493
              |||||||||  |||||||||||||||||
Sbjct: 116281 atccatctgtataattaaaaaccataca 116254
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>gb|AC019026.12| Mus musculus chromosome 6 clone RP23-188E5 strain C57BL6/J, complete
             sequence
          Length = 157996

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gcctttctaagaagctcaag 328
             ||||||||||||||||||||
Sbjct: 15009 gcctttctaagaagctcaag 14990
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    ccagcctctacgacacaaca 223
              ||||||||||||||||||||
Sbjct: 591233 ccagcctctacgacacaaca 591214
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>gb|AC100769.2| Homo sapiens chromosome 11, clone RP11-701P23, complete sequence
          Length = 171700

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 466   atccatctgagtaattaaaaaccataca 493
             |||||||||  |||||||||||||||||
Sbjct: 10374 atccatctgtataattaaaaaccataca 10401
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>gb|AC008677.5| Homo sapiens chromosome 5 clone CTB-47B8, complete sequence
          Length = 160929

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    tgctaaaattgtggtgaaac 187
              ||||||||||||||||||||
Sbjct: 110904 tgctaaaattgtggtgaaac 110885
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>ref|XM_680045.1| PREDICTED: Danio rerio similar to PX domain containing
           serine/threonine kinase (LOC557065), mRNA
          Length = 777

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 acaaataagctgaaagagct 155
           ||||||||||||||||||||
Sbjct: 727 acaaataagctgaaagagct 746
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>dbj|AK040318.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A430086H03 product:unclassifiable, full
            insert sequence
          Length = 1894

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcctttctaagaagctcaag 328
            ||||||||||||||||||||
Sbjct: 1683 gcctttctaagaagctcaag 1664
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>emb|BX465854.7| Zebrafish DNA sequence from clone DKEY-208M10 in linkage group 12,
              complete sequence
          Length = 204314

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     aggtttgttacaggctatca 96
              ||||||||||||||||||||
Sbjct: 204192 aggtttgttacaggctatca 204173
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>emb|BX465192.7| Zebrafish DNA sequence from clone CH211-202P4 in linkage group 12,
             complete sequence
          Length = 200890

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    aggtttgttacaggctatca 96
             ||||||||||||||||||||
Sbjct: 54683 aggtttgttacaggctatca 54702
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>gb|AF217843.1|AF217843 Penaeus monodon, complete mitochondrial genome
          Length = 15984

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ggctttataggtttgttaca 88
             ||||||||||||||||||||
Sbjct: 12498 ggctttataggtttgttaca 12479
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>emb|AL844869.5| Mouse DNA sequence from clone RP23-437K18 on chromosome X, complete
              sequence
          Length = 207432

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 302    aaatggggcctttctaagaagctc 325
              ||||||||||||||| ||||||||
Sbjct: 150647 aaatggggcctttcttagaagctc 150670
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>emb|AL929096.5| Zebrafish DNA sequence from clone DKEY-216E9 in linkage group 17,
             complete sequence
          Length = 192592

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   tgagtaattaaaaaccatac 492
             ||||||||||||||||||||
Sbjct: 18877 tgagtaattaaaaaccatac 18858
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>gb|AC157091.6| Mus musculus 6 BAC RP24-359O2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 206538

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gcctttctaagaagctcaag 328
             ||||||||||||||||||||
Sbjct: 23223 gcctttctaagaagctcaag 23204
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>emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in linkage group 22,
             complete sequence
          Length = 159207

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   acaaataagctgaaagagct 155
             ||||||||||||||||||||
Sbjct: 13840 acaaataagctgaaagagct 13859
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>gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complete sequence
          Length = 198162

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   gcacacatgctacaaataag 144
             ||||||||||||||||||||
Sbjct: 29345 gcacacatgctacaaataag 29364


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,276,054
Number of Sequences: 3902068
Number of extensions: 6276054
Number of successful extensions: 115036
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114898
Number of HSP's gapped (non-prelim): 138
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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