ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags38f17 |
|---|---|
| Clone Library Name | barley_pub |
>PSD12_PONPY (Q5RBI3) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 110 bits (275), Expect = 4e-24 Identities = 51/107 (47%), Positives = 77/107 (71%) Frame = -1 Query: 615 GTKAAEDLKLRIIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKI 436 G K +DLK R++EHNI +++KYY+RI++KR+A LL LS+ E+E +S++V +K + AK+ Sbjct: 346 GEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKV 405 Query: 435 DRPMGIVSFRTAQDSNGVLNSWASNLEKLLDLVEKSCHQIHKETMIH 295 DR GI++F+ +D N +LN W+ L L+ LV K+ H I KE MIH Sbjct: 406 DRLAGIINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 452
>PSD12_MOUSE (Q9D8W5) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 110 bits (275), Expect = 4e-24 Identities = 50/107 (46%), Positives = 77/107 (71%) Frame = -1 Query: 615 GTKAAEDLKLRIIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKI 436 G K +DLK R++EHNI +++KYY+RI++KR+A LL LS+ E+E +S++V +K + AK+ Sbjct: 346 GEKRWKDLKSRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKV 405 Query: 435 DRPMGIVSFRTAQDSNGVLNSWASNLEKLLDLVEKSCHQIHKETMIH 295 DR G+++F+ +D N +LN W+ L L+ LV K+ H I KE MIH Sbjct: 406 DRLAGVINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 452
>PSD12_HUMAN (O00232) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 110 bits (275), Expect = 4e-24 Identities = 51/107 (47%), Positives = 77/107 (71%) Frame = -1 Query: 615 GTKAAEDLKLRIIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKI 436 G K +DLK R++EHNI +++KYY+RI++KR+A LL LS+ E+E +S++V +K + AK+ Sbjct: 346 GEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKV 405 Query: 435 DRPMGIVSFRTAQDSNGVLNSWASNLEKLLDLVEKSCHQIHKETMIH 295 DR GI++F+ +D N +LN W+ L L+ LV K+ H I KE MIH Sbjct: 406 DRLAGIINFQRPKDPNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIH 452
>RPN5_YEAST (Q12250) 26S proteasome regulatory subunit RPN5 (Proteasome| non-ATPase subunit 5) Length = 445 Score = 100 bits (249), Expect = 4e-21 Identities = 52/118 (44%), Positives = 80/118 (67%), Gaps = 1/118 (0%) Frame = -1 Query: 645 NEKNL-LGGALGTKAAEDLKLRIIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISD 469 NE +L GG EDL+ R+IEHN+ V+S+YYSRI+L RL +LL L+ + E +ISD Sbjct: 323 NEDDLAFGGEANKHHWEDLQKRVIEHNLRVISEYYSRITLLRLNELLDLTESQTETYISD 382 Query: 468 MVNSKALIAKIDRPMGIVSFRTAQDSNGVLNSWASNLEKLLDLVEKSCHQIHKETMIH 295 +VN + AK++RP IV+F ++S+ +LN W+ N+++LL+ +E H I KE ++H Sbjct: 383 LVNQGIIYAKVNRPAKIVNFEKPKNSSQLLNEWSHNVDELLEHIETIGHLITKEEIMH 440
>RPN5_SCHPO (Q9UTM3) 26S proteasome regulatory subunit rpn5| Length = 443 Score = 87.4 bits (215), Expect = 4e-17 Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 3/115 (2%) Frame = -1 Query: 615 GTKAAEDLKLRIIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKI 436 G K +L+ R+IEHNI VV+ YYSRI RL LL +S E E+ + D++ AKI Sbjct: 329 GEKRWSELRKRVIEHNIRVVANYYSRIHCSRLGVLLDMSPSETEQFLCDLIAKHHFYAKI 388 Query: 435 DRPMGIVSFRTAQDSNGVLNSWASNLEKLLDLVEKSCHQIHKETM---IHKAVLK 280 DRP ++SF+ +Q+ LN W SN+ +LL +EK I KE M I +AV K Sbjct: 389 DRPAQVISFKKSQNVQEQLNEWGSNITELLGKLEKVRQLIIKEEMMNSIQQAVAK 443
>CSN4_RAT (Q68FS2) COP9 signalosome complex subunit 4 (Signalosome subunit 4)| (SGN4) (JAB1-containing signalosome subunit 4) Length = 406 Score = 46.2 bits (108), Expect = 9e-05 Identities = 27/78 (34%), Positives = 41/78 (52%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVSFRT 403 +IEHN+L SK Y+ I+ + L LL + +AEK S M+ + ID+ GIV F T Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFET 363 Query: 402 AQDSNGVLNSWASNLEKL 349 + L +W ++ L Sbjct: 364 RE----ALPTWDKQIQSL 377
>CSN4_MOUSE (O88544) COP9 signalosome complex subunit 4 (Signalosome subunit 4)| (SGN4) (JAB1-containing signalosome subunit 4) Length = 406 Score = 46.2 bits (108), Expect = 9e-05 Identities = 27/78 (34%), Positives = 41/78 (52%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVSFRT 403 +IEHN+L SK Y+ I+ + L LL + +AEK S M+ + ID+ GIV F T Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFET 363 Query: 402 AQDSNGVLNSWASNLEKL 349 + L +W ++ L Sbjct: 364 RE----ALPTWDKQIQSL 377
>CSN4_HUMAN (Q9BT78) COP9 signalosome complex subunit 4 (Signalosome subunit 4)| (SGN4) (JAB1-containing signalosome subunit 4) Length = 406 Score = 46.2 bits (108), Expect = 9e-05 Identities = 27/78 (34%), Positives = 41/78 (52%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVSFRT 403 +IEHN+L SK Y+ I+ + L LL + +AEK S M+ + ID+ GIV F T Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFET 363 Query: 402 AQDSNGVLNSWASNLEKL 349 + L +W ++ L Sbjct: 364 RE----ALPTWDKQIQSL 377
>CSN4_BRARE (Q6P0H6) COP9 signalosome complex subunit 4 (Signalosome subunit 4)| Length = 406 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/78 (34%), Positives = 41/78 (52%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVSFRT 403 +IEHN+L SK Y+ I+ + L LL + +AEK S M+ + ID+ GIV F T Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPPAKAEKIASQMITEGRMNGFIDQIDGIVHFET 363 Query: 402 AQDSNGVLNSWASNLEKL 349 + L +W ++ L Sbjct: 364 REP----LPTWDKQIQSL 377
>CSN4_ARATH (Q8L5U0) COP9 signalosome complex subunit 4 (Signalosome subunit 4)| (Constitutive photomorphogenesis protein 8) (FUSCA protein 4) (FUSCA4) (AtS4) Length = 397 Score = 42.4 bits (98), Expect = 0.001 Identities = 23/78 (29%), Positives = 38/78 (48%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVSFRT 403 +IEHN+L SK Y+ I L LL + ++AEK ++M+ + ID+ ++ F Sbjct: 303 MIEHNLLSASKLYTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHF-- 360 Query: 402 AQDSNGVLNSWASNLEKL 349 +D L W + L Sbjct: 361 -EDDVEELQQWDQQISGL 377
>CSN4_DROME (Q9V345) COP9 signalosome complex subunit 4 (Signalosome subunit 4)| (Dch4) Length = 407 Score = 42.4 bits (98), Expect = 0.001 Identities = 26/90 (28%), Positives = 44/90 (48%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVSFRT 403 + EHN+L SK Y+ I+ + L LL + +AEK S M+ + ID+ IV F Sbjct: 311 VFEHNLLSASKLYNNITFEELGALLDIPAVKAEKIASQMITEGRMNGHIDQISAIVHF-- 368 Query: 402 AQDSNGVLNSWASNLEKLLDLVEKSCHQIH 313 ++ +L W ++ L C+Q++ Sbjct: 369 --ENRELLPQWDRQIQSL-------CYQVN 389
>IF38_CAEEL (O02328) Probable eukaryotic translation initiation factor 3| subunit 8 (eIF3 p110) (eIF3c) Length = 898 Score = 40.0 bits (92), Expect = 0.007 Identities = 27/84 (32%), Positives = 41/84 (48%) Frame = -1 Query: 567 ILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVSFRTAQDSN 388 +L S Y+ +SLK+LADL LS ++ IS M+ + L A +D P + + S Sbjct: 749 LLTYSTVYATVSLKKLADLFELSKKDVHSIISKMIIQEELSATLDEPTDCLIMHRVEPSR 808 Query: 387 GVLNSWASNLEKLLDLVEKSCHQI 316 L A NL L + ++ QI Sbjct: 809 --LQMLALNLSDKLQTLAENNEQI 830
>CSN1_CAEEL (Q9GS00) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| Length = 601 Score = 34.7 bits (78), Expect = 0.28 Identities = 19/78 (24%), Positives = 41/78 (52%) Frame = -1 Query: 612 TKAAEDLKLRIIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKID 433 ++ ++L +I + +L + YS I + +A+ + +S E + + +++ K + KID Sbjct: 428 SRNVDELFEKIRQKCVLQYLQPYSTIKMATMAEAVGMSSAELQLSLLELIEQKHVSLKID 487 Query: 432 RPMGIVSFRTAQDSNGVL 379 + GIV +D N +L Sbjct: 488 QNEGIVRILDERDENAIL 505
>RPN6_SCHPO (Q9P7S2) Probable 26S proteasome regulatory subunit rpn6| Length = 421 Score = 34.3 bits (77), Expect = 0.36 Identities = 16/54 (29%), Positives = 31/54 (57%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMG 421 ++E N+L V + +SR+ + +A+L+ LS + E +S M+ K +D+ G Sbjct: 328 LLEQNLLRVVEPFSRVEVSHIAELIGLSTVQVEGKLSQMILDKIFYGILDQGSG 381
>IF38_MEDTR (Q9XHM1) Eukaryotic translation initiation factor 3 subunit 8 (eIF3| p110) (eIF3c) Length = 935 Score = 33.5 bits (75), Expect = 0.62 Identities = 22/91 (24%), Positives = 43/91 (47%) Frame = -1 Query: 600 EDLKLRIIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMG 421 + +K + + S Y +S+ +L + LSL +S M+ ++ L A D+P G Sbjct: 728 DKIKEEALRTYLFTFSSSYDSLSVVQLTNFFDLSLPRVHSIVSRMMVNEELHASWDQPTG 787 Query: 420 IVSFRTAQDSNGVLNSWASNLEKLLDLVEKS 328 + FR + S + + A L + L ++ +S Sbjct: 788 CIIFRNVEHSR--VQALAFQLTEKLSILAES 816
>CSN4_SCHPO (O13895) COP9 signalosome complex subunit 4 (CSN complex subunit 4)| (SGN4) Length = 377 Score = 33.5 bits (75), Expect = 0.62 Identities = 19/57 (33%), Positives = 33/57 (57%) Frame = -1 Query: 579 IEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVSF 409 +E NIL +S+++ S LA LS ++ + ++DMV + L A ID+ G ++F Sbjct: 295 LETNILFLSEFFEVSSTSILAKHFKLSEEQVDTVVADMVIQERLNASIDQCEGYITF 351
>CSN3_MOUSE (O88543) COP9 signalosome complex subunit 3 (Signalosome subunit 3)| (SGN3) (JAB1-containing signalosome subunit 3) Length = 422 Score = 33.5 bits (75), Expect = 0.62 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLS-LQEAEKHISDMVNSKALIAKIDRPMGIVSF 409 + + NI ++K + +SL+ +A + LS QEAEK++ M+ + A I++ G+VSF Sbjct: 301 LYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSF 359
>CSN3_HUMAN (Q9UNS2) COP9 signalosome complex subunit 3 (Signalosome subunit 3)| (SGN3) (JAB1-containing signalosome subunit 3) Length = 422 Score = 33.5 bits (75), Expect = 0.62 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLS-LQEAEKHISDMVNSKALIAKIDRPMGIVSF 409 + + NI ++K + +SL+ +A + LS QEAEK++ M+ + A I++ G+VSF Sbjct: 301 LYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSF 359
>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (Fragments) Length = 1956 Score = 33.1 bits (74), Expect = 0.81 Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%) Frame = +3 Query: 420 SPLVCRSLQSRPLSSPCPRYASLPPASSGKE--DPP 521 S +V +S+ ++P SSP PRY S+PP+ S E PP Sbjct: 1002 SAVVPKSILAKPSSSPDPRYLSVPPSPSISESRSPP 1037
>L_RINDR (P41357) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2183 Score = 33.1 bits (74), Expect = 0.81 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +1 Query: 184 LFYPSSDSEFRS-IESTTHTTYTRPFSSKWFSGFQHRLVDHRLLVYLVAALLHQVQEL 354 LF+ + +E RS I+S+ HT++ R + +FSG ++ R LV +V LH V L Sbjct: 166 LFWFTIKTEMRSTIKSSVHTSHRRRYVPSFFSGDSFEILISRDLVAIVHRRLHHVYYL 223
>IF36_DROME (O77410) Probable eukaryotic translation initiation factor 3| subunit 6 (eIF-3 p48) (eIF3e) Length = 435 Score = 33.1 bits (74), Expect = 0.81 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 5/99 (5%) Frame = -1 Query: 600 EDLKLRIIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMG 421 ED +L I E + + I++ LAD L + EAE I +++ + L AKID +G Sbjct: 328 EDARLMIFE----TFCRIHQCITISMLADKLNMKPNEAECWIVNLIRNARLNAKIDSKLG 383 Query: 420 IVSFRTA-----QDSNGVLNSWASNLEKLLDLVEKSCHQ 319 V T Q ++S + E L L+E+ Q Sbjct: 384 HVVMGTQPLSPYQQLVEKIDSLSMRSEHLAGLIERKSKQ 422
>YR161_MIMIV (Q7T6X0) Hypothetical protein R161| Length = 433 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 1/88 (1%) Frame = +1 Query: 61 NNVQKNT-ANSIRHSLWLQYLKTGSHTRVPKANRRCSHLSGELFYPSSDSEFRSIESTTH 237 N+ +KN+ ANS+ L+Y K T +P N+ P+ D+ + Sbjct: 191 NSFEKNSEANSVNKITPLKYPKVYEDTNIPLTNKE----------PNKDASTLEKQKNLR 240 Query: 238 TTYTRPFSSKWFSGFQHRLVDHRLLVYL 321 T Y + F +K ++ ++ + + +LL+ L Sbjct: 241 TDYLKYFLNKLYNSYKDKNIKSKLLLEL 268
>IF36_MOUSE (P60229) Eukaryotic translation initiation factor 3 subunit 6| (eIF-3 p48) (eIF3e) (Mammary tumor-associated protein INT-6) (Viral integration site protein INT-6) (MMTV integration site 6) Length = 445 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/70 (31%), Positives = 37/70 (52%) Frame = -1 Query: 537 ISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVSFRTAQDSNGVLNSWASNL 358 IS+ LAD L ++ +EAE+ I +++ + L AKID +G V N ++ + + Sbjct: 351 ISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVM-----GNNAVSPYQQVI 405 Query: 357 EKLLDLVEKS 328 EK L +S Sbjct: 406 EKTKSLSFRS 415
>IF36_HUMAN (P60228) Eukaryotic translation initiation factor 3 subunit 6| (eIF-3 p48) (eIF3e) (Viral integration site protein INT-6 homolog) Length = 445 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/70 (31%), Positives = 37/70 (52%) Frame = -1 Query: 537 ISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVSFRTAQDSNGVLNSWASNL 358 IS+ LAD L ++ +EAE+ I +++ + L AKID +G V N ++ + + Sbjct: 351 ISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVM-----GNNAVSPYQQVI 405 Query: 357 EKLLDLVEKS 328 EK L +S Sbjct: 406 EKTKSLSFRS 415
>CD1D1_MOUSE (P11609) T-cell surface glycoprotein CD1d1 precursor (CD1.1| antigen) Length = 336 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/82 (25%), Positives = 40/82 (48%) Frame = +1 Query: 151 ANRRCSHLSGELFYPSSDSEFRSIESTTHTTYTRPFSSKWFSGFQHRLVDHRLLVYLVAA 330 ANR S ++ + S +S T ++T+P+S S Q + H VY V+ Sbjct: 37 ANRSWSRTDSVVWLGDLQTHRWSNDSAT-ISFTKPWSQGKLSNQQWEKLQHMFQVYRVS- 94 Query: 331 LLHQVQELLQVRRPRVEHPVAV 396 +QEL+++ P+ ++P+ + Sbjct: 95 FTRDIQELVKMMSPKEDYPIEI 116
>CSN3_XENLA (Q7ZTN8) COP9 signalosome complex subunit 3 (Signalosome subunit 3)| Length = 423 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLS-LQEAEKHISDMVNSKALIAKIDRPMGIVSFR 406 + + NI ++K + +SL+ +A + LS QEAEK++ M+ + A I++ G+V F Sbjct: 302 LYKKNIQRLTKTFLTLSLQDMASRVQLSGAQEAEKYVLYMIEDGEIFASINQKDGMVCFH 361 Query: 405 TAQD 394 + + Sbjct: 362 DSPE 365
>CSN3_BRARE (Q6P2U9) COP9 signalosome complex subunit 3 (Signalosome subunit 3)| Length = 423 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 4/88 (4%) Frame = -1 Query: 582 IIEHNILVVSKYYSRISLKRLADLLCLS-LQEAEKHISDMVNSKALIAKIDRPMGIVSFR 406 + + NI ++K + +SL+ +A + LS QEAEK++ M+ + A I++ G+V F Sbjct: 302 LYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIYASINQKDGMVCFH 361 Query: 405 ---TAQDSNGVLNSWASNLEKLLDLVEK 331 ++ +L+ + K ++L EK Sbjct: 362 DNPEKYNNPAMLHKIDQEMLKCIELDEK 389
>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 32.0 bits (71), Expect = 1.8 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 4/38 (10%) Frame = +3 Query: 420 SPLVCRSLQSRPLSSPCPRYASLPP----ASSGKEDPP 521 S +V +S+ ++P SSP PRY S+PP ++S PP Sbjct: 1005 SVMVPKSILAKPSSSPDPRYLSVPPSPNISTSESRSPP 1042
>CLF1_CANAL (Q5AED6) Pre-mRNA-splicing factor CLF1| Length = 758 Score = 31.6 bits (70), Expect = 2.4 Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 7/135 (5%) Frame = -1 Query: 666 SSKDEYENEKNLLGGALGTKAAEDLKLRIIEHNILVVSKY--YSRISL--KRLADLLCLS 499 +S+D + +LG A+G + K++I ++ I + K ++R+ L ++ ++ L+ Sbjct: 482 NSEDGLAKARKILGRAIGQTSINKPKIKIFKYYIDLEKKLGDWNRVRLLFQKWLEVSLLT 541 Query: 498 LQEAEKHISDMVNSKALIAKIDRPMGIVSFRTAQDSNGVLNSWASNLEKLLDLV---EKS 328 +E I V ++ I + DR I+S N +S + NL++LL++ K Sbjct: 542 TSSSELVIEKYVEFESSIEEYDRCDSILSSARQLSENPEYSS-SFNLQRLLEITVEFYKE 600 Query: 327 CHQIHKETMIHKAVL 283 Q K I++A+L Sbjct: 601 EMQYDKIREIYRALL 615
>CH60_METMA (Q8PW06) 60 kDa chaperonin (Protein Cpn60) (groEL protein)| Length = 536 Score = 31.6 bits (70), Expect = 2.4 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -1 Query: 672 GNSSKDEYENEKNLLGGALGTKAAEDLKLRIIEHNILVVSKYYSRISLKR 523 GN+ K +N K ++ G KA D ++R+IE I + Y + LK+ Sbjct: 317 GNARKVTVDNHKTIIVEGRGDKADIDERVRVIEAQINIAEADYRKTELKK 366
>CCD93_XENLA (Q6GQI5) Coiled-coil domain-containing protein 93| Length = 609 Score = 31.2 bits (69), Expect = 3.1 Identities = 21/119 (17%), Positives = 54/119 (45%) Frame = -1 Query: 672 GNSSKDEYENEKNLLGGALGTKAAEDLKLRIIEHNILVVSKYYSRISLKRLADLLCLSLQ 493 G K E + E+ L +A E+L+++ + + + R++ + ++ L Sbjct: 225 GLVGKGEVKEEEEL-------RAEEELRIKALMTEMAAMGMEEGRLTASTVGQIVGLQSD 277 Query: 492 EAEKHISDMVNSKALIAKIDRPMGIVSFRTAQDSNGVLNSWASNLEKLLDLVEKSCHQI 316 E ++ +S+ ++ ++ DRP + + + + LN +KLLD +++ ++ Sbjct: 278 EIKQMVSEYAEKQSELSAEDRPEYLGAAQQHRRKVASLNKQIGQRKKLLDQLQEKASEL 336
>YCX7_CHLRE (P36495) 232.2 kDa protein (ORF1995) (ORF-S) (ORFA)| Length = 1995 Score = 30.8 bits (68), Expect = 4.0 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = +1 Query: 34 SQEWIPKNTNNVQKNTANSIRHSLWLQYLKTGSHTRVPKANRRCSHLS 177 +Q ++PK TNNVQ N+ +++W + ++ RR LS Sbjct: 1316 NQAYLPKETNNVQFNSFVDSNNNVWQTFFAKKLRKKISSKGRRYRSLS 1363
>CD1D2_MOUSE (P11610) T-cell surface glycoprotein CD1d2 precursor (CD1.2| antigen) Length = 336 Score = 30.8 bits (68), Expect = 4.0 Identities = 14/52 (26%), Positives = 29/52 (55%) Frame = +1 Query: 241 TYTRPFSSKWFSGFQHRLVDHRLLVYLVAALLHQVQELLQVRRPRVEHPVAV 396 ++T+P+S S Q + H VY V+ +QEL+++ P+ ++P+ + Sbjct: 66 SFTKPWSQGKLSNQQWEKLQHMFQVYRVS-FTRDIQELVKMMSPKEDYPIEI 116
>MTLR_STRMU (Q02425) Putative transcriptional regulator mtlR [Includes:| Putative phosphotransferase enzyme IIA component (EC 2.7.1.-) (Putative PTS system EIIA component)] Length = 650 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/40 (35%), Positives = 26/40 (65%) Frame = -1 Query: 576 EHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNS 457 E ++L + Y ++SLK++ DLL +S + + ISD+ +S Sbjct: 7 EKHLLAAFQNYGKLSLKQMIDLLKVSQRTVYRTISDLTDS 46
>GUNS_CLOTM (P38686) Endoglucanase SS precursor (EC 3.2.1.4) (EGSS)| (Endo-1,4-beta-glucanase) (Cellulase SS) Length = 741 Score = 30.4 bits (67), Expect = 5.2 Identities = 22/88 (25%), Positives = 39/88 (44%) Frame = +1 Query: 22 ISPGSQEWIPKNTNNVQKNTANSIRHSLWLQYLKTGSHTRVPKANRRCSHLSGELFYPSS 201 +S ++ PK++N + T + R + Q+L++ A + + YP+ Sbjct: 359 VSATQSDFAPKSSNGKRDWTTSYKRQLEFYQWLQSAEGGIAGGATNSWNGRYEK--YPAG 416 Query: 202 DSEFRSIESTTHTTYTRPFSSKWFSGFQ 285 S F + H Y P S++WF GFQ Sbjct: 417 TSTFYGMAYVPHPVYADPGSNQWF-GFQ 443
>NADA_METMA (Q8PV98) Quinolinate synthetase A| Length = 304 Score = 30.0 bits (66), Expect = 6.9 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%) Frame = -1 Query: 612 TKAAEDLKLRIIEHNILVVSKYYSRISLKRLADLLCLSL---QEAEKHISDMV 463 TK +LKL+ N +++S YYSR ++ +AD + SL QEA + +D++ Sbjct: 7 TKRINELKLK---RNAVILSHYYSRPEVQDIADFVGDSLALSQEAVRQDADVI 56
>PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (Rpn7 protein) Length = 389 Score = 30.0 bits (66), Expect = 6.9 Identities = 19/87 (21%), Positives = 46/87 (52%) Frame = -1 Query: 591 KLRIIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAKIDRPMGIVS 412 ++RI+ + L+ S Y ++L+ +A+ ++++ ++ ++ + + L AK+DR GIV Sbjct: 298 EMRILGYTQLLES--YRSLTLQYMAESFGVTVEYIDQELARFIAAGRLHAKVDRVGGIVE 355 Query: 411 FRTAQDSNGVLNSWASNLEKLLDLVEK 331 + N + + LL+ ++K Sbjct: 356 TNRPDNKNWQYQATIKQGDLLLNRIQK 382
>PROA_CLOTE (Q896G4) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 428 Score = 29.6 bits (65), Expect = 9.0 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Frame = -1 Query: 609 KAAEDLKL---RIIEHNILVVSKYYSRISLKRLADLLCLSLQEAEKHISDMVNSKALIAK 439 K EDLK +II N + + K + K L D L + EK ++DMVN +A+ Sbjct: 36 KMGEDLKANMNKIIAANKIDMEKGKEKGLSKSLLDRLLID----EKRVNDMVNGLIEVAE 91 Query: 438 IDRPMGIV 415 + P+G V Sbjct: 92 LPDPIGEV 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,962,391 Number of Sequences: 219361 Number of extensions: 1904755 Number of successful extensions: 5978 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5735 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5977 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
