| Clone Name | rbags38f16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | GLGA_STRPN (Q97QS5) Glycogen synthase (EC 2.4.1.21) (Starch [bac... | 30 | 5.0 | 2 | EGR4_RAT (Q00911) Early growth response protein 4 (EGR-4) (Early... | 30 | 6.5 | 3 | EGR4_MOUSE (Q9WUF2) Early growth response protein 4 (EGR-4) | 30 | 6.5 |
|---|
>GLGA_STRPN (Q97QS5) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial| glycogen] synthase) Length = 477 Score = 30.0 bits (66), Expect = 5.0 Identities = 23/99 (23%), Positives = 40/99 (40%) Frame = +1 Query: 181 QTVAATTG*SFQLKARDPLLIXLPGLNIQVHSXKRLCWRNLLMSRCCLNYSLVGVXXXXX 360 +TV FQ + + +L L G+ + ++ L W N CLN+ G+ Sbjct: 157 ETVLTIHNLEFQGQFSEGMLGDLFGVGFERYADGTLRWNN------CLNWMKAGILYANR 210 Query: 361 XXXXXXXXXHQLVSSXCS*LSEQILSTAKGELEEIHFGI 477 H++++S +QIL G++ I GI Sbjct: 211 VSTVSPSYAHEIMTSQFGCNLDQILKMESGKVSGIVNGI 249
>EGR4_RAT (Q00911) Early growth response protein 4 (EGR-4) (Early response| protein NGFI-C) (Nerve growth factor-induced protein C) (NGFI-C) Length = 478 Score = 29.6 bits (65), Expect = 6.5 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +3 Query: 228 GSPPHXATGLEYSGPFXEEVMLEEPADVTLLFELFLG 338 G P +GL YSG F + + E P D LF L G Sbjct: 69 GPAPTPPSGLSYSGSFFIQAVPEHPHDPEALFNLMSG 105
>EGR4_MOUSE (Q9WUF2) Early growth response protein 4 (EGR-4)| Length = 478 Score = 29.6 bits (65), Expect = 6.5 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +3 Query: 228 GSPPHXATGLEYSGPFXEEVMLEEPADVTLLFELFLG 338 G P +GL YSG F + + E P D LF L G Sbjct: 69 GPAPTPPSGLSYSGSFFIQAVPEHPHDPEALFNLMSG 105 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,304,083 Number of Sequences: 219361 Number of extensions: 1446328 Number of successful extensions: 3119 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3074 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3119 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)