ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags38f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, ... 474 e-130
2emb|AJ250665.1|HVU250665 Hordeum vulgare partial mRNA for putati... 377 e-101
3gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 343 5e-91
4gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence 333 5e-88
5gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 293 4e-76
6gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 287 3e-74
7gb|AY323206.1| Hordeum vulgare SUSIBA2 (susiba2) mRNA, complete cds 196 7e-47
8gb|AY672998.1| Triticum aestivum cultivar Soleil putative non-LT... 161 4e-36
9gb|AY672997.1| Triticum aestivum cultivar Saitama 27 Tourist MIT... 161 4e-36
10gb|AY672995.1| Triticum aestivum cultivar Chinese Spring Tourist... 161 4e-36
11gb|AY672994.1| Triticum aestivum subsp. spelta cultivar Grey Tou... 161 4e-36
12emb|AJ295224.1|TAE295224 Triticum aestivum phyC gene for phytoch... 161 4e-36
13gb|AY672996.1| Triticum aestivum cultivar Reward Tourist MITE, c... 153 1e-33
14gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR c... 145 2e-31
15gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, gen... 52 0.003
16gb|U71331.1|EGU71331 Eremias grammica mitochondrial genes encodi... 50 0.010
17gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.16
18gb|AC139135.5| Mus musculus chromosome 9, clone RP24-360E17, com... 46 0.16
19gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.16
20gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 46 0.16
21dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
22dbj|AK059453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.16
24gb|AC114604.10| Mus musculus chromosome 9, clone RP23-367L9, com... 46 0.16
25emb|AL645532.16| Mouse DNA sequence from clone RP23-295E4 on chr... 44 0.63
26tpg|BK000323.1| TPA: TPA_exp: Oryza sativa (indica cultivar-grou... 44 0.63
27dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
28dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
29dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
30dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
31dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
32dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
33dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
34gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 44 0.63
35dbj|D88392.1| Oryza sativa DNA GC-rich sequence 44 0.63
36gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
37gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, co... 42 2.5
38gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.5
39gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
40ref|XM_650057.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 42 2.5
41ref|XM_651754.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 42 2.5
42emb|AL512306.16| Human DNA sequence from clone RP11-430C7 on chr... 42 2.5
43gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
44emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,... 42 2.5
45gb|AC092079.2| Homo sapiens chromosome 15 clone RP11-568G20 map ... 42 2.5
46dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
47dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
48dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
49dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
50dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
51gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 2.5
52dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
53dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
54dbj|AP005472.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
55dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
56dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
57gb|AY111776.1| Zea mays CL39796_1 mRNA sequence 42 2.5
58gb|AY504523.1| Saccopteryx bilineata isolate CR1 NADH dehydrogen... 42 2.5
59gb|AC113982.8| Mus musculus chromosome 1, clone RP24-78E16, comp... 42 2.5
60ref|NM_112195.2| Arabidopsis thaliana ATP binding / aspartate-tR... 40 9.9
61ref|XM_514820.1| PREDICTED: Pan troglodytes ADP-ribosylation fac... 40 9.9
62ref|XM_876027.1| PREDICTED: Bos taurus similar to ADP-ribosylati... 40 9.9
63ref|XM_865367.1| PREDICTED: Bos taurus similar to ADP-ribosylati... 40 9.9
64gb|AC133508.3| Mus musculus BAC clone RP23-383K24 from chromosom... 40 9.9
65gb|AC131798.3| Mus musculus BAC clone RP24-497K17 from chromosom... 40 9.9
66ref|XM_675729.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 9.9
67ref|XM_850227.1| PREDICTED: Canis familiaris similar to ADP-ribo... 40 9.9
68gb|AC012569.18| Homo sapiens chromosome , clone RP11-8H2, comple... 40 9.9
69gb|AY737718.1| Escherichia blattae dihydroxyacetone kinase (dhaK... 40 9.9
70emb|CR762472.6| Zebrafish DNA sequence from clone DKEY-75G19 in ... 40 9.9
71gb|AC133537.2| Homo sapiens chromosome 5 clone CTD-2310L4, compl... 40 9.9
72gb|AY039937.1| Arabidopsis thaliana At3g13490 mRNA sequence 40 9.9
73emb|BX957223.1| Methanococcus maripaludis S2 complete genome; se... 40 9.9
74emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4,... 40 9.9
75gb|DQ372923.1| Bacteriophage mu1/6, complete genome 40 9.9
76emb|AJ239004.1|SPN239004 Streptococcus pneumoniae type 8 capsula... 40 9.9
77gb|AC023674.4| Drosophila melanogaster 3L BAC RP98-11E6 (Roswell... 40 9.9
78gb|AC010661.8| Drosophila melanogaster 3L BAC RP98-13A12 (Roswel... 40 9.9
79gb|AC113424.2| Homo sapiens chromosome 5 clone RP11-624C4, compl... 40 9.9
80gb|AC003105.3| Arabidopsis thaliana chromosome 2 clone F18A8 map... 40 9.9
81gb|AC104120.2| Homo sapiens chromosome 5 clone RP11-404L6, compl... 40 9.9
82gb|AC016564.6| Homo sapiens chromosome 5 clone CTC-538E9, comple... 40 9.9
83dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
84gb|AF316641.1|AF316641 Streptococcus pneumoniae serotype 8 capsu... 40 9.9
85emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4,... 40 9.9
86gb|AC023492.5| Homo sapiens BAC clone RP11-24M5 from 4, complete... 40 9.9
87emb|BX830965.1|CNS09ZII Arabidopsis thaliana Full-length cDNA Co... 40 9.9
88ref|XM_236267.3| PREDICTED: Rattus norvegicus similar to high mo... 40 9.9
89gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete seq... 40 9.9
90gb|BT002317.1| Arabidopsis thaliana clone C105095 putative lysyl... 40 9.9
91dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
92gb|AY634388.1| Prionailurus bengalensis NADH dehydrogenase subun... 40 9.9
93dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
94dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
95dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.9
96dbj|AP001310.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.9
97dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
98emb|CR925820.5| Zebrafish DNA sequence from clone CH211-22E9 in ... 40 9.9
99emb|CR931644.1| Streptococcus pneumoniae strain 573/62 (serotype 8) 40 9.9
100gb|AC122547.11| Mus musculus chromosome 1, clone RP23-76P20, com... 40 9.9
101gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20... 40 9.9
102dbj|AP001985.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.9
103emb|BX119983.4| Zebrafish DNA sequence from clone CH211-198G9 in... 40 9.9
104emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 9.9
105dbj|AP008951.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 9.9
106dbj|AP006081.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 9.9
107emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chro... 40 9.9
108emb|AL714007.10| Mouse DNA sequence from clone RP23-295M3 on chr... 40 9.9 
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
          Length = 439641

 Score =  474 bits (239), Expect = e-130
 Identities = 278/291 (95%)
 Strand = Plus / Plus

                                                                         
Query: 180   catcttcaacagtccgtatgttcaatcgttggtataagtgtccacatcaacaaccaacaa 239
             ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| 
Sbjct: 30723 catcttcaacagttcgtatgttcaatcgttgatataagtgtccacatcaacaaccaacag 30782

                                                                         
Query: 240   cacatcatacaagctcttcaatggagtgtatgttaatcgtatgtaaaataactaaacggg 299
              |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 30783 aacatcatacaagctcttcaatgtagtgtatgttaatcgtatgtaaaataactaagcggg 30842

                                                                         
Query: 300   tccactaaacatggaagaaataatcatgcttgcctcggagcttgtgcgtgaaccgttgct 359
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 30843 tccactaaacatggaagaaataaccatgcttgcctcggagcttgtgcgtgaaccgttgct 30902

                                                                         
Query: 360   tcaagttcatacgatttcattctctttcttctcttattatgcgccatgtcatcaaaatca 419
             | ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 30903 ttaagttcatacgatttcattctctctcttcttttattatgcgccatgtcatcaaaatca 30962

                                                                
Query: 420   tctatgtgccaatattaccaacgatgatcatacaaccattggagatgccct 470
             ||||||||  ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 30963 tctatgtggtaattttaccaacgatgatcatacaaccattggagatgccct 31013
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>emb|AJ250665.1|HVU250665 Hordeum vulgare partial mRNA for putative DCINA-induced protein,
           clone BCI-9
          Length = 281

 Score =  377 bits (190), Expect = e-101
 Identities = 216/224 (96%), Gaps = 1/224 (0%)
 Strand = Plus / Minus

                                                                       
Query: 296 cgggtccactaaacatggaagaaataatcatgctt-gcctcggagcttgtgcgtgaaccg 354
           ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 224 cgggtccactaaacatggaagaaataaccatgctttgcctcggagcttgtgcgtgaaccg 165

                                                                       
Query: 355 ttgcttcaagttcatacgatttcattctctttcttctcttattatgcgccatgtcatcaa 414
           ||||||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||
Sbjct: 164 ttgcttcaagttcatacgatttcattctctttcttcttttatdaggcgtcatgtcatcaa 105

                                                                       
Query: 415 aatcatctatgtgccaatattaccaacgatgatcatacaaccattggagatgcccttact 474
           ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 104 aatcatctatgtggcaatattaccaacgatgatcatacaatcattggagatgcccttact 45

                                                       
Query: 475 gcgcgagctagggccggattagcaatcatatcaaccaatactgt 518
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  gcgcgagctagggccggattagcaatcatatcaaccaatactgt 1
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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score =  343 bits (173), Expect = 5e-91
 Identities = 266/297 (89%)
 Strand = Plus / Minus

                                                                         
Query: 174   ttagagcatcttcaacagtccgtatgttcaatcgttggtataagtgtccacatcaacaac 233
             ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| | 
Sbjct: 30261 ttagagcatcttcaacagtccatatgttcaatcgttggtataagtatccacatcaacgat 30202

                                                                         
Query: 234   caacaacacatcatacaagctcttcaatggagtgtatgttaatcgtatgtaaaataacta 293
             ||| | ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 30201 caagagcacatcatacaagctcttcaatgtagtatatgttaatcgtatgtaaaataacta 30142

                                                                         
Query: 294   aacgggtccactaaacatggaagaaataatcatgcttgcctcggagcttgtgcgtgaacc 353
             | ||||||||||||| |  |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 30141 agcgggtccactaaatagtgaagaaataaccatgcttgcctcggagcttgtgcgtgaacc 30082

                                                                         
Query: 354   gttgcttcaagttcatacgatttcattctctttcttctcttattatgcgccatgtcatca 413
              ||||||||||||||||| | |||||| ||| ||||||  ||||||| | ||||| || |
Sbjct: 30081 attgcttcaagttcataccacttcattttctatcttcttctattatgtgtcatgttatta 30022

                                                                      
Query: 414   aaatcatctatgtgccaatattaccaacgatgatcatacaaccattggagatgccct 470
             ||||||||||| ||  ||| ||||||||||||||||||  ||||||| |||||||||
Sbjct: 30021 aaatcatctatatgataattttaccaacgatgatcataggaccattgaagatgccct 29965
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>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
          Length = 184425

 Score =  333 bits (168), Expect = 5e-88
 Identities = 267/300 (89%)
 Strand = Plus / Minus

                                                                          
Query: 173    cttagagcatcttcaacagtccgtatgttcaatcgttggtataagtgtccacatcaacaa 232
              |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 144576 cttagatcatcttcaacagttcgtatgttcaatcgttggtataagtgtccacatcatcaa 144517

                                                                          
Query: 233    ccaacaacacatcatacaagctcttcaatggagtgtatgttaatcgtatgtaaaataact 292
              |||||| |||||||||||||||||||||| |||||||||||||   |||||| |||||||
Sbjct: 144516 ccaacagcacatcatacaagctcttcaatagagtgtatgttaacattatgtataataact 144457

                                                                          
Query: 293    aaacgggtccactaaacatggaagaaataatcatgcttgcctcggagcttgtgcgtgaac 352
              ||  ||||||| ||||  |  ||||||||| |||| |||||||||||||||||| |||||
Sbjct: 144456 aagtgggtccattaaatgttaaagaaataaccatgtttgcctcggagcttgtgcatgaac 144397

                                                                          
Query: 353    cgttgcttcaagttcatacgatttcattctctttcttctcttattatgcgccatgtcatc 412
              ||||||||||| |||||||| ||||||||||| |||||| |||||||| | |||||||||
Sbjct: 144396 cgttgcttcaaattcatacggtttcattctctctcttcttttattatgtgtcatgtcatc 144337

                                                                          
Query: 413    aaaatcatctatgtgccaatattaccaacgatgatcatacaaccattggagatgccctta 472
              |||||||| ||||||  ||| |||||||| |||||||||| ||||||| |||||| ||||
Sbjct: 144336 aaaatcatttatgtggtaattttaccaactatgatcatacgaccattgaagatgctctta 144277



 Score =  246 bits (124), Expect = 9e-62
 Identities = 165/176 (93%), Gaps = 2/176 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     aagatgtaaggtaataaataaggtgctctct-attctacattggagcttgtgcaaaggtg 59
             ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 55228 aagatgtgaggtaataaataaggtgctctctcattctacattggagcttgtgcaagggtg 55169

                                                                         
Query: 60    ttggttaatttacatacaacattcctctctttcctcatttattgct-tgacacatcatca 118
             |||||||||||||||||||| ||  ||| ||||||||||||||||  |||||||||||||
Sbjct: 55168 ttggttaatttacatacaaccttgttctatttcctcatttattgcaatgacacatcatca 55109

                                                                     
Query: 119   aaaatcttatgtgtcaaaattaccaacaactatcttacaaccattgaagatgccct 174
             |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 55108 aaaatcctatgtgtcaaaattaccaacaactatcttacaaccattggagatgccct 55053



 Score =  246 bits (124), Expect = 9e-62
 Identities = 165/176 (93%), Gaps = 2/176 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    aagatgtaaggtaataaataaggtgctctct-attctacattggagcttgtgcaaaggtg 59
            ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 2969 aagatgtgaggtaataaataaggtgctctctcattctacattggagcttgtgcaagggtg 3028

                                                                        
Query: 60   ttggttaatttacatacaacattcctctctttcctcatttattgct-tgacacatcatca 118
            |||||||||||||||||||| ||  ||| ||||||||||||||||  |||||||||||||
Sbjct: 3029 ttggttaatttacatacaaccttgttctatttcctcatttattgcaatgacacatcatca 3088

                                                                    
Query: 119  aaaatcttatgtgtcaaaattaccaacaactatcttacaaccattgaagatgccct 174
            |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3089 aaaatcctatgtgtcaaaattaccaacaactatcttacaaccattggagatgccct 3144



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 421   ctatgtgccaatattaccaacgatgatcatacaaccattggagatgccct 470
             ||||||| ||| ||||||||| |  ||| |||||||||||||||||||||
Sbjct: 55102 ctatgtgtcaaaattaccaacaactatcttacaaccattggagatgccct 55053



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 421  ctatgtgccaatattaccaacgatgatcatacaaccattggagatgccct 470
            ||||||| ||| ||||||||| |  ||| |||||||||||||||||||||
Sbjct: 3095 ctatgtgtcaaaattaccaacaactatcttacaaccattggagatgccct 3144
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>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score =  293 bits (148), Expect = 4e-76
 Identities = 261/297 (87%), Gaps = 5/297 (1%)
 Strand = Plus / Minus

                                                                          
Query: 176    agagcatcttcaacagtccgtatgttcaatcgttggtataagtgtccacatcaacaacca 235
              |||||||||||||| ||| |||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 193330 agagcatcttcaacggtctgtatgt-caatcgttggtataagtgtccacatcatcaacca 193272

                                                                          
Query: 236    acaacacatcatacaagctcttcaatggagtgtatgttaatcgtatgtaaaataactaaa 295
              ||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| || 
Sbjct: 193271 acagcacatcatacaagctcttcaatagagtgtatgttaaccgtatgtaaaataacgaag 193212

                                                                          
Query: 296    cgggtccactaaacatggaagaaataatcatgcttgcctcggagcttgtgcgtgaaccgt 355
               ||||||| ||||  |  |||||||||| ||| |||||||||||||||||| ||||||||
Sbjct: 193211 tgggtccattaaatgttaaagaaataatgatgtttgcctcggagcttgtgcatgaaccgt 193152

                                                                          
Query: 356    tgcttcaagttcatacgatttcattctctttcttctcttattatgcgccatgtcatcaaa 415
              |||||||| | |||||| ||||||||| |||    | |||||||| | |||||||| |||
Sbjct: 193151 tgcttcaaatgcatacggtttcattcttttt----ttttattatgtgtcatgtcattaaa 193096

                                                                       
Query: 416    atcatctatgtgccaatattaccaacgatgatcatacaaccattggagatgccctta 472
              ||||| ||||||  ||| ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 193095 atcatttatgtggtaattttaccaacgatgatcatactaccattgaagatgccctta 193039



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    accattgaagatgcccttaga 178
              |||||||||||||||||||||
Sbjct: 193057 accattgaagatgcccttaga 193037
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>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score =  287 bits (145), Expect = 3e-74
 Identities = 224/249 (89%), Gaps = 1/249 (0%)
 Strand = Plus / Plus

                                                                         
Query: 176   agagcatcttcaacagtccgtatgttcaatcgttggtataagtgtccacatcaacaacca 235
             ||||||||| |||||||||||||||||||||| |||||||||||| ||  ||| ||  ||
Sbjct: 74227 agagcatctccaacagtccgtatgttcaatcgatggtataagtgttcatgtcagcagtca 74286

                                                                         
Query: 236   acaacacatcatacaagctcttcaatggagtgtatgttaatcgtatgtaaaataactaaa 295
             |||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 74287 acaacacatcatacaaacacttcaatggagtgtatgttaaccgtatgtaaaataactaaa 74346

                                                                         
Query: 296   cgggtccactaaacatggaag-aaataatcatgcttgcctcggagcttgtgcgtgaaccg 354
             ||||||||||| |  | |||| |||| | |||||||||||||||||||||||||||||||
Sbjct: 74347 cgggtccactagatgttgaagaaaatgaccatgcttgcctcggagcttgtgcgtgaaccg 74406

                                                                         
Query: 355   ttgcttcaagttcatacgatttcattctctttcttctcttattatgcgccatgtcatcaa 414
             |||||||| ||||||||||||||||||| | |||||| |||||||| | |||||||||||
Sbjct: 74407 ttgcttcaggttcatacgatttcattctatctcttcttttattatgtgacatgtcatcaa 74466

                      
Query: 415   aatcatcta 423
             || ||||||
Sbjct: 74467 aaccatcta 74475
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>gb|AY323206.1| Hordeum vulgare SUSIBA2 (susiba2) mRNA, complete cds
          Length = 2354

 Score =  196 bits (99), Expect = 7e-47
 Identities = 132/139 (94%), Gaps = 3/139 (2%)
 Strand = Plus / Plus

                                                                       
Query: 526 agatcatgcatcgttgagccgcttggtgggcgagacggcctcgatggcctccccgagcgg 585
           ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 1   agatcatgcatcgttgagccgcttggtgggcgagacggc-tcgatgggctccccgagcgg 59

                                                                       
Query: 586 ccacgcggcctcgatgaagtactccccgtgcttcaccttctgcgccacggtgatctcctt 645
            ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 60  gcacgcgggctcgatgaagtactccccgtgcttca-cttctgcgccacggtgatctcctt 118

                              
Query: 646 -ggtcggctccaagccgaa 663
            |||||| |||||||||||
Sbjct: 119 gggtcgggtccaagccgaa 137
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>gb|AY672998.1| Triticum aestivum cultivar Soleil putative non-LTR retroelement and
            Tourist MITE, complete sequence; and phytochrome C
            (PhyC-5A) gene, complete cds
          Length = 9533

 Score =  161 bits (81), Expect = 4e-36
 Identities = 131/145 (90%), Gaps = 2/145 (1%)
 Strand = Plus / Minus

                                                                        
Query: 32   attctacattggagcttgtgcaaagg-tgttggttaatttacatacaacattcctctctt 90
            ||||||||||| ||||||||||| || |||||||| || |||||||||| ||||||||||
Sbjct: 4278 attctacattgaagcttgtgcaatgggtgttggttcatgtacatacaaccttcctctctt 4219

                                                                        
Query: 91   tcctcatttattgcttgacacatcatcaaaaatcttatgtgtcaaaat-taccaacaact 149
            |||||||||||||  ||||||||||||||||||| |||||| |||| | |||||||||||
Sbjct: 4218 tcctcatttattgtatgacacatcatcaaaaatcctatgtgacaaactctaccaacaact 4159

                                     
Query: 150  atcttacaaccattgaagatgccct 174
            ||||||| |||||| ||||||||||
Sbjct: 4158 atcttacgaccattaaagatgccct 4134
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>gb|AY672997.1| Triticum aestivum cultivar Saitama 27 Tourist MITE, complete
           sequence; and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5515

 Score =  161 bits (81), Expect = 4e-36
 Identities = 131/145 (90%), Gaps = 2/145 (1%)
 Strand = Plus / Minus

                                                                       
Query: 32  attctacattggagcttgtgcaaagg-tgttggttaatttacatacaacattcctctctt 90
           ||||||||||| ||||||||||| || |||||||| || |||||||||| ||||||||||
Sbjct: 255 attctacattgaagcttgtgcaatgggtgttggttcatgtacatacaaccttcctctctt 196

                                                                       
Query: 91  tcctcatttattgcttgacacatcatcaaaaatcttatgtgtcaaaat-taccaacaact 149
           |||||||||||||  ||||||||||||||||||| |||||| |||| | |||||||||||
Sbjct: 195 tcctcatttattgtatgacacatcatcaaaaatcctatgtgacaaactctaccaacaact 136

                                    
Query: 150 atcttacaaccattgaagatgccct 174
           ||||||| ||||||| |||||||||
Sbjct: 135 atcttacgaccattggagatgccct 111
to top
>gb|AY672995.1| Triticum aestivum cultivar Chinese Spring Tourist MITE, complete
           sequence; and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5582

 Score =  161 bits (81), Expect = 4e-36
 Identities = 131/145 (90%), Gaps = 2/145 (1%)
 Strand = Plus / Minus

                                                                       
Query: 32  attctacattggagcttgtgcaaagg-tgttggttaatttacatacaacattcctctctt 90
           ||||||||||| ||||||||||| || |||||||| || |||||||||| ||||||||||
Sbjct: 255 attctacattgaagcttgtgcaatgggtgttggttcatgtacatacaaccttcctctctt 196

                                                                       
Query: 91  tcctcatttattgcttgacacatcatcaaaaatcttatgtgtcaaaat-taccaacaact 149
           |||||||||||||  ||||||||||||||||||| |||||| |||| | |||||||||||
Sbjct: 195 tcctcatttattgtatgacacatcatcaaaaatcctatgtgacaaactctaccaacaact 136

                                    
Query: 150 atcttacaaccattgaagatgccct 174
           ||||||| ||||||| |||||||||
Sbjct: 135 atcttacgaccattggagatgccct 111
to top
>gb|AY672994.1| Triticum aestivum subsp. spelta cultivar Grey Tourist MITE,
           complete sequence; and phytochrome C (PhyC-5A) gene,
           complete cds
          Length = 5570

 Score =  161 bits (81), Expect = 4e-36
 Identities = 131/145 (90%), Gaps = 2/145 (1%)
 Strand = Plus / Minus

                                                                       
Query: 32  attctacattggagcttgtgcaaagg-tgttggttaatttacatacaacattcctctctt 90
           ||||||||||| ||||||||||| || |||||||| || |||||||||| ||||||||||
Sbjct: 255 attctacattgaagcttgtgcaatgggtgttggttcatgtacatacaaccttcctctctt 196

                                                                       
Query: 91  tcctcatttattgcttgacacatcatcaaaaatcttatgtgtcaaaat-taccaacaact 149
           |||||||||||||  ||||||||||||||||||| |||||| |||| | |||||||||||
Sbjct: 195 tcctcatttattgtatgacacatcatcaaaaatcctatgtgacaaactctaccaacaact 136

                                    
Query: 150 atcttacaaccattgaagatgccct 174
           ||||||| ||||||| |||||||||
Sbjct: 135 atcttacgaccattggagatgccct 111
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>emb|AJ295224.1|TAE295224 Triticum aestivum phyC gene for phytochrome C, exons 1-4
          Length = 7219

 Score =  161 bits (81), Expect = 4e-36
 Identities = 131/145 (90%), Gaps = 2/145 (1%)
 Strand = Plus / Minus

                                                                        
Query: 32   attctacattggagcttgtgcaaagg-tgttggttaatttacatacaacattcctctctt 90
            ||||||||||| ||||||||||| || |||||||| || |||||||||| ||||||||||
Sbjct: 1115 attctacattgaagcttgtgcaatgggtgttggttcatgtacatacaaccttcctctctt 1056

                                                                        
Query: 91   tcctcatttattgcttgacacatcatcaaaaatcttatgtgtcaaaat-taccaacaact 149
            |||||||||||||  ||||||||||||||||||| |||||| |||| | |||||||||||
Sbjct: 1055 tcctcatttattgtatgacacatcatcaaaaatcctatgtgacaaactctaccaacaact 996

                                     
Query: 150  atcttacaaccattgaagatgccct 174
            ||||||| |||||| ||||||||||
Sbjct: 995  atcttacgaccattaaagatgccct 971
to top
>gb|AY672996.1| Triticum aestivum cultivar Reward Tourist MITE, complete sequence;
           and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5516

 Score =  153 bits (77), Expect = 1e-33
 Identities = 130/145 (89%), Gaps = 2/145 (1%)
 Strand = Plus / Minus

                                                                       
Query: 32  attctacattggagcttgtgcaaagg-tgttggttaatttacatacaacattcctctctt 90
           ||||||||||| | ||||||||| || |||||||| || |||||||||| ||||||||||
Sbjct: 255 attctacattgaaacttgtgcaatgggtgttggttcatgtacatacaaccttcctctctt 196

                                                                       
Query: 91  tcctcatttattgcttgacacatcatcaaaaatcttatgtgtcaaaat-taccaacaact 149
           |||||||||||||  ||||||||||||||||||| |||||| |||| | |||||||||||
Sbjct: 195 tcctcatttattgtatgacacatcatcaaaaatcctatgtgacaaactctaccaacaact 136

                                    
Query: 150 atcttacaaccattgaagatgccct 174
           ||||||| ||||||| |||||||||
Sbjct: 135 atcttacgaccattggagatgccct 111
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>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like
             putative defense response protein, and putative alliin
             lyase genes, complete cds; and unknown genes
          Length = 106618

 Score =  145 bits (73), Expect = 2e-31
 Identities = 129/145 (88%), Gaps = 2/145 (1%)
 Strand = Plus / Plus

                                                                         
Query: 32    attctacattggagcttgtgcaaagg-tgttggttaatttacatacaacattcctctctt 90
             |||||||||  |||||||||||| || |||||||| || |||||||||| ||| ||||||
Sbjct: 89801 attctacatcagagcttgtgcaagggatgttggttcatgtacatacaactttcttctctt 89860

                                                                         
Query: 91    tcctcatttattgcttgacacatcatcaaaaatcttatgtgtcaaaat-taccaacaact 149
              ||||||||||||| ||||||||||||||||||| |||||| |||| | ||| |||||||
Sbjct: 89861 ccctcatttattgcatgacacatcatcaaaaatcctatgtggcaaagtctacgaacaact 89920

                                      
Query: 150   atcttacaaccattgaagatgccct 174
             ||||||||||||||| |||||||||
Sbjct: 89921 atcttacaaccattggagatgccct 89945



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 450   tacaaccattggagatgccct 470
             |||||||||||||||||||||
Sbjct: 89925 tacaaccattggagatgccct 89945
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>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 36/38 (94%), Gaps = 1/38 (2%)
 Strand = Plus / Minus

                                                   
Query: 43    gagcttgtgcaaagg-tgttggttaatttacatacaac 79
             ||||||||||||||| ||||||||||| ||||||||||
Sbjct: 89780 gagcttgtgcaaaggttgttggttaatctacatacaac 89743
to top
>gb|U71331.1|EGU71331 Eremias grammica mitochondrial genes encoding mitochondrial tRNAs and
            proteins, NADH dehydrogenase subunit II (ND2), tRNA Ile,
            tRNA Gln, tRNA Met, tRNA Trp, tRNA Ala, tRNA Asn, tRNA
            Cys, and tRNA Tyr genes, complete cds, and NADH
            dehydrogenase subunit I (ND1) and cytochrome c oxidase
            subunit I (CO1) genes, partial cds
          Length = 1735

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 265  gtgtatgttaatcgtatgtaaaata 289
            |||||||||||||||||||||||||
Sbjct: 1195 gtgtatgttaatcgtatgtaaaata 1171
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>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18,
              complete sequence
          Length = 150279

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 584    ggccacgcggcctcgatgaagtactccccgtgcttcaccttct 626
              |||||||| || |||||| ||||||| || |||||||||||||
Sbjct: 123493 ggccacgccgcttcgatgtagtactctccatgcttcaccttct 123451
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>gb|AC139135.5| Mus musculus chromosome 9, clone RP24-360E17, complete sequence
          Length = 161297

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 77     aacattcctctctttcctcatttattg 103
              |||||| ||||||||||||||||||||
Sbjct: 126908 aacatttctctctttcctcatttattg 126882
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 610     cccgtgcttcaccttctgcgccacggt 636
               ||||| |||||||||||||||||||||
Sbjct: 1813551 cccgtccttcaccttctgcgccacggt 1813577
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 662     aacccgtccacgagcagggagta 684
               |||||||||||||||||||||||
Sbjct: 2443436 aacccgtccacgagcagggagta 2443458
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 584     ggccacgcggcctcgatgaagtactccccgtgcttcaccttct 626
               |||||||| || |||||| ||||||| || |||||||||||||
Sbjct: 1227687 ggccacgccgcttcgatgtagtactctccatgcttcaccttct 1227645



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                                 
Query: 85       tctctttcctcatttatt-gcttgacacatcat 116
                |||||||||||||||||| ||||| ||||||||
Sbjct: 23250307 tctctttcctcatttattcgcttgccacatcat 23250339
to top
>dbj|AK059453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-B11, full
           insert sequence
          Length = 735

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 584 ggccacgcggcctcgatgaagtactccccgtgcttcaccttct 626
           |||||||| || |||||| ||||||| || |||||||||||||
Sbjct: 588 ggccacgccgcttcgatgtagtactctccatgcttcaccttct 546
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 584     ggccacgcggcctcgatgaagtactccccgtgcttcaccttct 626
               |||||||| || |||||| ||||||| || |||||||||||||
Sbjct: 1225408 ggccacgccgcttcgatgtagtactctccatgcttcaccttct 1225366



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                                 
Query: 85       tctctttcctcatttatt-gcttgacacatcat 116
                |||||||||||||||||| ||||| ||||||||
Sbjct: 23560217 tctctttcctcatttattcgcttgccacatcat 23560249
to top
>gb|AC114604.10| Mus musculus chromosome 9, clone RP23-367L9, complete sequence
          Length = 195888

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 77    aacattcctctctttcctcatttattg 103
             |||||| ||||||||||||||||||||
Sbjct: 27985 aacatttctctctttcctcatttattg 28011
to top
>emb|AL645532.16| Mouse DNA sequence from clone RP23-295E4 on chromosome 11 Contains two
              novel genes, the 3' end of the Egfr gene for epidermal
              growth factor receptor and the gene for a novel F-box
              domain containing protein, complete sequence
          Length = 161348

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 225    atcaacaaccaacaacacatca 246
              ||||||||||||||||||||||
Sbjct: 135012 atcaacaaccaacaacacatca 135033
to top
>tpg|BK000323.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) transposon
           Rim2-M44, complete sequence
          Length = 2086

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 172 ccttagagcatcttcaacagtc 193
           ||||||||||||||||||||||
Sbjct: 303 ccttagagcatcttcaacagtc 324
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                      
Query: 80       attcctctctttcctcattta-ttgcttgacacatcat 116
                |||| |||||||||||||||| || |||||||||||||
Sbjct: 25604880 attcttctctttcctcatttatttacttgacacatcat 25604917



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 172      ccttagagcatcttcaacagtc 193
                ||||||||||||||||||||||
Sbjct: 24232536 ccttagagcatcttcaacagtc 24232557



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                                 
Query: 85       tctctttcctcatttatt-gcttgacacatcat 116
                ||||||||||||||||||  |||||||||||||
Sbjct: 25872581 tctctttcctcatttattcacttgacacatcat 25872613
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 81       ttcctctctttcctcatttatt 102
                ||||||||||||||||||||||
Sbjct: 30735789 ttcctctctttcctcatttatt 30735768



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 172      ccttagagcatcttcaacagtc 193
                ||||||||||||||||||||||
Sbjct: 15431744 ccttagagcatcttcaacagtc 15431723



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       cctctctttcctcatttatt 102
                ||||||||||||||||||||
Sbjct: 25777607 cctctctttcctcatttatt 25777588
to top
>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0021A09
          Length = 127973

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 81    ttcctctctttcctcatttatt 102
             ||||||||||||||||||||||
Sbjct: 25064 ttcctctctttcctcatttatt 25043
to top
>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1045D11
          Length = 142320

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 172    ccttagagcatcttcaacagtc 193
              ||||||||||||||||||||||
Sbjct: 109285 ccttagagcatcttcaacagtc 109264
to top
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0014E22
          Length = 157627

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                   
Query: 80    attcctctctttcctcattta-ttgcttgacacatcat 116
             |||| |||||||||||||||| || |||||||||||||
Sbjct: 74927 attcttctctttcctcatttatttacttgacacatcat 74964
to top
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0010C01
          Length = 186185

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                  
Query: 80   attcctctctttcctcattta-ttgcttgacacatcat 116
            |||| |||||||||||||||| || |||||||||||||
Sbjct: 7556 attcttctctttcctcatttatttacttgacacatcat 7593
to top
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2055_H10
          Length = 119290

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 172   ccttagagcatcttcaacagtc 193
             ||||||||||||||||||||||
Sbjct: 32924 ccttagagcatcttcaacagtc 32945
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 378     attctctttcttctcttattat 399
               ||||||||||||||||||||||
Sbjct: 4823739 attctctttcttctcttattat 4823718
to top
>dbj|D88392.1| Oryza sativa DNA GC-rich sequence
          Length = 2025

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 172  ccttagagcatcttcaacagtc 193
            ||||||||||||||||||||||
Sbjct: 1073 ccttagagcatcttcaacagtc 1094
to top
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11,
              complete sequence
          Length = 146677

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 169    tgcccttagagcatcttcaacagtc 193
              |||||||||||||||| ||||||||
Sbjct: 127632 tgcccttagagcatctccaacagtc 127608
to top
>gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, complete sequence; putative Bowman
             Birk trypsin inhibitor gene, complete cds; Stowaway MITE,
             complete sequence; and insertion sequences xl_tt1a and
             xl_tt1b putative ripening related protein genes, complete
             cds
          Length = 26073

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   cttagagcatcttcaacagtc 193
             |||||||||||||||||||||
Sbjct: 12253 cttagagcatcttcaacagtc 12233
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                                 
Query: 85       tctctttcctcatttatt-gcttgacacatcat 116
                ||||||||||||||||||  |||||||||||||
Sbjct: 11862645 tctctttcctcatttattcacttgacacatcat 11862677
to top
>gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBb0030L19, complete sequence
          Length = 128848

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                               
Query: 85     tctctttcctcatttatt-gcttgacacatcat 116
              |||||||||||||||||| ||||| ||||||||
Sbjct: 119492 tctctttcctcatttattcgcttgccacatcat 119524
to top
>ref|XM_650057.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
            (35.t00030) partial mRNA
          Length = 1995

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 374  tttcattctctttcttctctt 394
            |||||||||||||||||||||
Sbjct: 1318 tttcattctctttcttctctt 1298
to top
>ref|XM_651754.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
            (7.t00057) partial mRNA
          Length = 2007

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 374  tttcattctctttcttctctt 394
            |||||||||||||||||||||
Sbjct: 1318 tttcattctctttcttctctt 1298
to top
>emb|AL512306.16| Human DNA sequence from clone RP11-430C7 on chromosome 1 Contains the
             MDM4 gene for Mdm4 (transformed 3T3 cell double minute 4)
             p53 binding protein (mouse), a PEF protein with a long
             N-terminal hydrophobic domain (peflin) (PEF) pseudogene,
             two novel genes and the 3' end of the LRRN5 gene for
             leucine rich repeat neuronal 5, complete sequence
          Length = 133984

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    tcctctctttcctcatttatt 102
             |||||||||||||||||||||
Sbjct: 71558 tcctctctttcctcatttatt 71538
to top
>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034K24,
              complete sequence
          Length = 142852

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                               
Query: 85     tctctttcctcatttatt-gcttgacacatcat 116
              |||||||||||||||||| ||||| ||||||||
Sbjct: 136668 tctctttcctcatttattcgcttgccacatcat 136636
to top
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05,
             complete sequence
          Length = 158601

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 85    tctctttcctcatttatt-gcttgacacatcat 116
             ||||||||||||||||||  |||||||||||||
Sbjct: 60009 tctctttcctcatttattcacttgacacatcat 60041
to top
>gb|AC092079.2| Homo sapiens chromosome 15 clone RP11-568G20 map 15q22, complete
             sequence
          Length = 195554

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 373   atttcattctctttcttctct 393
             |||||||||||||||||||||
Sbjct: 78368 atttcattctctttcttctct 78388
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                                 
Query: 85       tctctttcctcatttatt-gcttgacacatcat 116
                ||||||||||||||||||  |||||||||||||
Sbjct: 25573812 tctctttcctcatttattcacttgacacatcat 25573844



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 172      ccttagagcatcttcaacag 191
                ||||||||||||||||||||
Sbjct: 21951031 ccttagagcatcttcaacag 21951050
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                                 
Query: 85       tctctttcctcatttatt-gcttgacacatcat 116
                ||||||||||||||||||  |||||||||||||
Sbjct: 20444183 tctctttcctcatttattcacttgacacatcat 20444215
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 173      cttagagcatcttcaacagtc 193
                |||||||||||||||||||||
Sbjct: 17531172 cttagagcatcttcaacagtc 17531152



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 227      caacaaccaacaacacatcat 247
                |||||||||||||||||||||
Sbjct: 13527034 caacaaccaacaacacatcat 13527054
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 169     tgcccttagagcatcttcaacagtc 193
               |||||||||||||||| ||||||||
Sbjct: 9355687 tgcccttagagcatctccaacagtc 9355663
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                                 
Query: 85       tctctttcctcatttatt-gcttgacacatcat 116
                ||||||||||||||||||  |||||||||||||
Sbjct: 11859408 tctctttcctcatttattcacttgacacatcat 11859440
to top
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0035J18, from chromsome 3, complete sequence
          Length = 162711

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                              
Query: 85    tctctttcctcatttatt-gcttgacacatcat 116
             ||||||||||||||||||  |||||||||||||
Sbjct: 48008 tctctttcctcatttattcacttgacacatcat 47976
to top
>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0459H02
          Length = 168230

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 227   caacaaccaacaacacatcat 247
             |||||||||||||||||||||
Sbjct: 55524 caacaaccaacaacacatcat 55544
to top
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0012H03
          Length = 163377

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    cttagagcatcttcaacagtc 193
              |||||||||||||||||||||
Sbjct: 162213 cttagagcatcttcaacagtc 162193
to top
>dbj|AP005472.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0075M17
          Length = 91422

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   cttagagcatcttcaacagtc 193
             |||||||||||||||||||||
Sbjct: 35618 cttagagcatcttcaacagtc 35598
to top
>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077J18
          Length = 180944

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 85    tctctttcctcatttatt-gcttgacacatcat 116
             ||||||||||||||||||  |||||||||||||
Sbjct: 25293 tctctttcctcatttattcacttgacacatcat 25325
to top
>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1282_H11
          Length = 143314

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 85    tctctttcctcatttatt-gcttgacacatcat 116
             ||||||||||||||||||  |||||||||||||
Sbjct: 23922 tctctttcctcatttattcacttgacacatcat 23954
to top
>gb|AY111776.1| Zea mays CL39796_1 mRNA sequence
          Length = 952

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 683 tactggtagacaaggtccatgcagatgtagggc 715
           ||||||||| ||||||||||||| | |||||||
Sbjct: 549 tactggtaggcaaggtccatgcacaggtagggc 581
to top
>gb|AY504523.1| Saccopteryx bilineata isolate CR1 NADH dehydrogenase subunit 2
           (ND2) gene, complete cds; mitochondrial
          Length = 1044

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 gtatgttaatcgtatgtaaaa 287
           |||||||||||||||||||||
Sbjct: 894 gtatgttaatcgtatgtaaaa 874
to top
>gb|AC113982.8| Mus musculus chromosome 1, clone RP24-78E16, complete sequence
          Length = 206640

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 172   ccttagagcatcttcaacagt 192
             |||||||||||||||||||||
Sbjct: 53270 ccttagagcatcttcaacagt 53250
to top
>ref|NM_112195.2| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/
           lysine-tRNA ligase/ nucleic acid binding / tRNA ligase
           AT3G13490 mRNA, complete cds
          Length = 2091

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 490 ggattagcaatcatatcaac 509
           ||||||||||||||||||||
Sbjct: 760 ggattagcaatcatatcaac 741
to top
>ref|XM_514820.1| PREDICTED: Pan troglodytes ADP-ribosylation factor GTPase
           activating protein 1 (LOC458456), mRNA
          Length = 1483

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 gacacatcatcaaaaatctt 126
           ||||||||||||||||||||
Sbjct: 900 gacacatcatcaaaaatctt 881
to top
>ref|XM_876027.1| PREDICTED: Bos taurus similar to ADP-ribosylation factor GTPase
           activating protein 1 isoform b, transcript variant 4
           (LOC506471), mRNA
          Length = 1678

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 gacacatcatcaaaaatctt 126
           ||||||||||||||||||||
Sbjct: 964 gacacatcatcaaaaatctt 945
to top
>ref|XM_865367.1| PREDICTED: Bos taurus similar to ADP-ribosylation factor GTPase
           activating protein 1 isoform b, transcript variant 2
           (LOC506471), mRNA
          Length = 1654

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 gacacatcatcaaaaatctt 126
           ||||||||||||||||||||
Sbjct: 934 gacacatcatcaaaaatctt 915
to top
>gb|AC133508.3| Mus musculus BAC clone RP23-383K24 from chromosome 3, complete sequence
          Length = 192136

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    tagagcatcttcaacagtcc 194
              ||||||||||||||||||||
Sbjct: 141599 tagagcatcttcaacagtcc 141618
to top
>gb|AC131798.3| Mus musculus BAC clone RP24-497K17 from chromosome 1, complete sequence
          Length = 142333

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 83    cctctctttcctcatttattgctt 106
             |||| |||||||||||||||||||
Sbjct: 98240 cctccctttcctcatttattgctt 98217
to top
>ref|XM_675729.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7552.2), mRNA
          Length = 3978

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 222  cacatcaacaaccaacaacacatc 245
            |||||||||||| |||||||||||
Sbjct: 3222 cacatcaacaacgaacaacacatc 3245
to top
>ref|XM_850227.1| PREDICTED: Canis familiaris similar to ADP-ribosylation factor
           GTPase activating protein 1 isoform b (LOC612498), mRNA
          Length = 1705

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 gacacatcatcaaaaatctt 126
           ||||||||||||||||||||
Sbjct: 956 gacacatcatcaaaaatctt 937
to top
>gb|AC012569.18| Homo sapiens chromosome , clone RP11-8H2, complete sequence
          Length = 153276

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 113    tcatcaaaaatcttatgtgtcaaa 136
              |||||| |||||||||||||||||
Sbjct: 111240 tcatcataaatcttatgtgtcaaa 111217
to top
>gb|AY737718.1| Escherichia blattae dihydroxyacetone kinase (dhaK), putative
             phosphoenolpyruvate-protein kinase (PTS system) (dhaN),
             putative dihydroxyacetone kinase (dhaM), hypothetical
             protein ycgT (dhaL), glycerol dehydrogenase (dhaD),
             glycerol metabolism operon regulatory protein (dhaR),
             putative adenosyl transferase subunit (dhaH), putative
             glycerol dehydratase reactivation factor small subunit
             (dhaG), 1,3-propanediol dehydrogenase (dhaT), putative
             adenosyl transferase subunit (dhaI), glycerol dehydratase
             large subunit (dhaB), glycerol dehydratase 21 kDa subunit,
             transcriptional regulator, Ner-like DNA-binding protein,
             transposase, DNA transposition protein, Cim protein, host
             nuclease inhibitor protein, hypothetical proteins, middle
             operon regulator, hypothetical proteins, Portal protein,
             hypothetical protein, F protein, I protein, major head
             subunit, hypothetical proteins, virion morphogenesis
             protein, hypothetical proteins, tail sheath protein, Tail
             tube protein, hypothetical proteins, DNA circulation
             protein, tail protein, baseplate assembly protein,
             hypothetical proteins, tail fiber protein, tail fiber
             assembly protein, hypothetical protein, glycerol
             dehydratase beta subunit, glycerol dehydratase small
             subunit (dhaE), and glycerol dehydratase reactivase chain
             A (dhaF) genes, complete cds
          Length = 49478

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 568   gatggcctccccgagcggccacgcggcc 595
             ||||||||||| ||||||||||| ||||
Sbjct: 48611 gatggcctccctgagcggccacggggcc 48638
to top
>emb|CR762472.6| Zebrafish DNA sequence from clone DKEY-75G19 in linkage group 1, complete
              sequence
          Length = 176472

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     ctttcctcatttattgcttg 107
              ||||||||||||||||||||
Sbjct: 121163 ctttcctcatttattgcttg 121182
to top
>gb|AC133537.2| Homo sapiens chromosome 5 clone CTD-2310L4, complete sequence
          Length = 102029

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    ttcctcatttattgcttgac 109
             ||||||||||||||||||||
Sbjct: 87166 ttcctcatttattgcttgac 87185
to top
>gb|AY039937.1| Arabidopsis thaliana At3g13490 mRNA sequence
          Length = 2096

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 490 ggattagcaatcatatcaac 509
           ||||||||||||||||||||
Sbjct: 760 ggattagcaatcatatcaac 741
to top
>emb|BX957223.1| Methanococcus maripaludis S2 complete genome; segment 5/5
          Length = 268122

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    attctctttcttctcttatt 397
              ||||||||||||||||||||
Sbjct: 195611 attctctttcttctcttatt 195592
to top
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete
             sequence
          Length = 121130

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   ccttagagcatcttcaacag 191
             ||||||||||||||||||||
Sbjct: 16953 ccttagagcatcttcaacag 16972
to top
>gb|DQ372923.1| Bacteriophage mu1/6, complete genome
          Length = 38194

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   gagcggccacgcggcctcga 599
             ||||||||||||||||||||
Sbjct: 10731 gagcggccacgcggcctcga 10712
to top
>emb|AJ239004.1|SPN239004 Streptococcus pneumoniae type 8 capsular gene cluster
          Length = 14730

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 490  ggattagcaatcatatcaac 509
            ||||||||||||||||||||
Sbjct: 8942 ggattagcaatcatatcaac 8961
to top
>gb|AC023674.4| Drosophila melanogaster 3L BAC RP98-11E6 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 182223

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    acatcaacaaccaacaacac 242
              ||||||||||||||||||||
Sbjct: 175394 acatcaacaaccaacaacac 175413
to top
>gb|AC010661.8| Drosophila melanogaster 3L BAC RP98-13A12 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 163115

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   acatcaacaaccaacaacac 242
             ||||||||||||||||||||
Sbjct: 82542 acatcaacaaccaacaacac 82561
to top
>gb|AC113424.2| Homo sapiens chromosome 5 clone RP11-624C4, complete sequence
          Length = 194717

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     ttcctcatttattgcttgac 109
              ||||||||||||||||||||
Sbjct: 159037 ttcctcatttattgcttgac 159018
to top
>gb|AC003105.3| Arabidopsis thaliana chromosome 2 clone F18A8 map B68, complete
             sequence
          Length = 95167

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   aaccattgaagatgccctta 176
             ||||||||||||||||||||
Sbjct: 37315 aaccattgaagatgccctta 37334
to top
>gb|AC104120.2| Homo sapiens chromosome 5 clone RP11-404L6, complete sequence
          Length = 123372

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tgctctctattctacattgg 43
             ||||||||||||||||||||
Sbjct: 99732 tgctctctattctacattgg 99713
to top
>gb|AC016564.6| Homo sapiens chromosome 5 clone CTC-538E9, complete sequence
          Length = 132573

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tgctctctattctacattgg 43
              ||||||||||||||||||||
Sbjct: 131223 tgctctctattctacattgg 131242
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 168      atgcccttagagcatcttcaacag 191
                ||||||||||||||||| ||||||
Sbjct: 11450936 atgcccttagagcatctccaacag 11450959
to top
>gb|AF316641.1|AF316641 Streptococcus pneumoniae serotype 8 capsular polysaccharide gene
            cluster, complete sequence
          Length = 13746

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 490  ggattagcaatcatatcaac 509
            ||||||||||||||||||||
Sbjct: 8314 ggattagcaatcatatcaac 8333
to top
>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20,
             complete sequence
          Length = 99855

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   ccttagagcatcttcaacag 191
             ||||||||||||||||||||
Sbjct: 23602 ccttagagcatcttcaacag 23621
to top
>gb|AC023492.5| Homo sapiens BAC clone RP11-24M5 from 4, complete sequence
          Length = 107458

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   tctttcctcatttattgctt 106
            ||||||||||||||||||||
Sbjct: 8801 tctttcctcatttattgctt 8782
to top
>emb|BX830965.1|CNS09ZII Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS42ZF03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1334

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 606 actccccgtgcttcaccttc 625
           ||||||||||||||||||||
Sbjct: 707 actccccgtgcttcaccttc 726
to top
>ref|XM_236267.3| PREDICTED: Rattus norvegicus similar to high mobility group 20A
           (LOC315689), mRNA
          Length = 1686

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 ccacatcaacaaccaacaac 240
           ||||||||||||||||||||
Sbjct: 417 ccacatcaacaaccaacaac 436
to top
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence
          Length = 105215

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   catcaacaaccaacaacaca 243
             ||||||||||||||||||||
Sbjct: 20098 catcaacaaccaacaacaca 20117
to top
>gb|BT002317.1| Arabidopsis thaliana clone C105095 putative lysyl-tRNA synthetase
           (At3g13490) mRNA, complete cds
          Length = 1840

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 490 ggattagcaatcatatcaac 509
           ||||||||||||||||||||
Sbjct: 737 ggattagcaatcatatcaac 718
to top
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1034_C08
          Length = 154441

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 168  atgcccttagagcatcttcaacag 191
            ||||||||||||||||| ||||||
Sbjct: 5070 atgcccttagagcatctccaacag 5093
to top
>gb|AY634388.1| Prionailurus bengalensis NADH dehydrogenase subunit 2 (NADH2) gene,
           partial cds; mitochondrial
          Length = 1038

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 agtgtatgttaatcgtatgtaaaa 287
           ||||||||||| ||||||||||||
Sbjct: 897 agtgtatgttagtcgtatgtaaaa 874
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>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0510C12
          Length = 177049

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    cctctctttcctcatttatt 102
             ||||||||||||||||||||
Sbjct: 17531 cctctctttcctcatttatt 17512
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>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039G05
          Length = 138429

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    cctctctttcctcatttatt 102
             ||||||||||||||||||||
Sbjct: 80071 cctctctttcctcatttatt 80052
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>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15
          Length = 83287

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 490   ggattagcaatcatatcaac 509
             ||||||||||||||||||||
Sbjct: 52091 ggattagcaatcatatcaac 52110
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>dbj|AP001310.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO22
          Length = 15145

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   aaccattggagatgccctta 472
             ||||||||||||||||||||
Sbjct: 13816 aaccattggagatgccctta 13797
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>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1114E07
          Length = 135511

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 168   atgcccttagagcatcttcaacag 191
             ||||||||||||||||| ||||||
Sbjct: 64925 atgcccttagagcatctccaacag 64948
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>emb|CR925820.5| Zebrafish DNA sequence from clone CH211-22E9 in linkage group 10,
              complete sequence
          Length = 173023

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 47     ttgtgcaaaggtgttggttaattt 70
              ||||||||| ||||||||||||||
Sbjct: 157183 ttgtgcaaatgtgttggttaattt 157206
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>emb|CR931644.1| Streptococcus pneumoniae strain 573/62 (serotype 8)
          Length = 13844

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 490  ggattagcaatcatatcaac 509
            ||||||||||||||||||||
Sbjct: 8321 ggattagcaatcatatcaac 8340
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>gb|AC122547.11| Mus musculus chromosome 1, clone RP23-76P20, complete sequence
          Length = 232651

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    tggaagaaataatcatgctt 330
              ||||||||||||||||||||
Sbjct: 147885 tggaagaaataatcatgctt 147904
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>gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20 of 83 of the complete
              sequence
          Length = 284268

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    acatcaacaaccaacaacac 242
              ||||||||||||||||||||
Sbjct: 146529 acatcaacaaccaacaacac 146548
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>dbj|AP001985.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-648J7, complete
             sequence
          Length = 161972

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   ccactaaacatggaagaaat 320
             ||||||||||||||||||||
Sbjct: 41298 ccactaaacatggaagaaat 41279
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>emb|BX119983.4| Zebrafish DNA sequence from clone CH211-198G9 in linkage group 1,
             complete sequence
          Length = 172227

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    ctttcctcatttattgcttg 107
             ||||||||||||||||||||
Sbjct: 83907 ctttcctcatttattgcttg 83888
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 571    ggcctccccgagcggccacgcggcctcgatga 602
              |||||| ||||||  |||||||||||||||||
Sbjct: 585478 ggcctcgccgagcccccacgcggcctcgatga 585509
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>dbj|AP008951.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT45D07, TM0932a,
             complete sequence
          Length = 28948

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   cttagagcatcttcaacagt 192
             ||||||||||||||||||||
Sbjct: 13992 cttagagcatcttcaacagt 14011
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>dbj|AP006081.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT32P24, TM0120,
             complete sequence
          Length = 137804

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 449   atacaaccattggagatgccctta 472
             ||||||||||||||||||| ||||
Sbjct: 42615 atacaaccattggagatgctctta 42638
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>emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chromosome 11, complete
              sequence
          Length = 243954

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    aagatgcccttagagcatct 184
              ||||||||||||||||||||
Sbjct: 201719 aagatgcccttagagcatct 201738



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    aagatgcccttagagcatct 184
              ||||||||||||||||||||
Sbjct: 199535 aagatgcccttagagcatct 199516
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>emb|AL714007.10| Mouse DNA sequence from clone RP23-295M3 on chromosome X, complete
              sequence
          Length = 146552

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      tgtaaggtaataaataaggt 24
              ||||||||||||||||||||
Sbjct: 105713 tgtaaggtaataaataaggt 105694


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,421,438
Number of Sequences: 3902068
Number of extensions: 6421438
Number of successful extensions: 142487
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 140995
Number of HSP's gapped (non-prelim): 1502
length of query: 721
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 698
effective length of database: 17,143,297,704
effective search space: 11966021797392
effective search space used: 11966021797392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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