ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags38e21 |
|---|---|
| Clone Library Name | barley_pub |
>RL31_NICGU (P46290) 60S ribosomal protein L31| Length = 120 Score = 174 bits (442), Expect = 1e-43 Identities = 88/123 (71%), Positives = 98/123 (79%) Frame = -3 Query: 516 MSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRID 337 MS+K + RK+EVVTREYT+NLHKRLH CTFKKKAP AIKEIRKFAQKAMGT DVR+D Sbjct: 1 MSDKTKG---RKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVD 57 Query: 336 VKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVE 157 VKLNK IWS GI RND+EDAKEELYSLVTVAE+P +GLKGLGTK++E Sbjct: 58 VKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIE 117 Query: 156 DED 148 DED Sbjct: 118 DED 120
>RL31_PERFR (Q9M573) 60S ribosomal protein L31| Length = 121 Score = 174 bits (442), Expect = 1e-43 Identities = 84/114 (73%), Positives = 96/114 (84%) Frame = -3 Query: 489 PRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWS 310 PRK+EVV+REYT+NLHKRLHGCTFKKKAP AIKEIRKFAQKAMGT DVR+DVKLNKHIWS Sbjct: 8 PRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWS 67 Query: 309 SGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 148 GI RND+EDAKEELYSLVTVAE+P+ GLKGLGT+V+++E+ Sbjct: 68 RGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121
>RL312_ARATH (P51420) 60S ribosomal protein L31-2| Length = 119 Score = 167 bits (424), Expect = 1e-41 Identities = 85/123 (69%), Positives = 96/123 (78%) Frame = -3 Query: 516 MSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRID 337 MSEKK RK+EV+TREYT+NLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+D Sbjct: 1 MSEKKG----RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56 Query: 336 VKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVE 157 VKLNK IWS GI RND+EDAKEE +SLVTVAE+P EGL GLGTKV+E Sbjct: 57 VKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIE 116 Query: 156 DED 148 +ED Sbjct: 117 EED 119
>RL311_ARATH (Q9STR1) 60S ribosomal protein L31-1| Length = 119 Score = 166 bits (421), Expect = 3e-41 Identities = 84/123 (68%), Positives = 95/123 (77%) Frame = -3 Query: 516 MSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRID 337 MSEKK RK+EVVTREYT+NLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+D Sbjct: 1 MSEKKG----RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVD 56 Query: 336 VKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVE 157 VKLNK IWS GI RND+EDAKEE +SLVTVAE+P EGL GLGTK++E Sbjct: 57 VKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIE 116 Query: 156 DED 148 +ED Sbjct: 117 EED 119
>RL31_PANGI (Q9MAV7) 60S ribosomal protein L31| Length = 121 Score = 166 bits (419), Expect = 5e-41 Identities = 81/113 (71%), Positives = 92/113 (81%) Frame = -3 Query: 486 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 307 RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVR+DVKLNK IWS Sbjct: 8 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSR 67 Query: 306 GIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 148 GI RND+EDAKEELYSLVTVA++P LKGLG +++E++D Sbjct: 68 GIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120
>RL31_PICMA (O65071) 60S ribosomal protein L31| Length = 120 Score = 164 bits (416), Expect = 1e-40 Identities = 79/113 (69%), Positives = 91/113 (80%) Frame = -3 Query: 486 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 307 R++EV TREYT+NLH+RLHGCTFKK AP A+KEIRKFAQKAMGT DVR+DVKLNK +WS Sbjct: 8 RRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNKAVWSR 67 Query: 306 GIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 148 GI RNDEEDAK+ELYS+VTVAEVP EGL GLGTK++E+ED Sbjct: 68 GIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 120
>RL31_CHLRE (P45841) 60S ribosomal protein L31| Length = 116 Score = 124 bits (312), Expect = 1e-28 Identities = 66/111 (59%), Positives = 77/111 (69%) Frame = -3 Query: 486 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 307 R E VTREYT++L KRLH +FKK AP A+KEIRKFA K MGT+DVR+DVKLNK +WS Sbjct: 7 RSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWSK 66 Query: 306 GIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 154 GI RND+EDAKEE+YS VTVAE + KG GT VV+D Sbjct: 67 GIKNVPTRLRIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVVVQD 115
>RL31_CYAPA (Q9XGL4) 60S ribosomal protein L31| Length = 119 Score = 122 bits (307), Expect = 5e-28 Identities = 63/112 (56%), Positives = 77/112 (68%) Frame = -3 Query: 486 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 307 R E+VTREYT+NLHKRLHG FKK+AP A+KEI+KFA K MGT DVR+D +LNK +W+ Sbjct: 10 RAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDPRLNKFVWNQ 69 Query: 306 GIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDE 151 GI RND+EDAKE+LY+LVT VP KGL T+ V+ E Sbjct: 70 GIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTY--VPVTSFKGLQTQNVDAE 119
>RL31_SPOFR (Q7KF90) 60S ribosomal protein L31| Length = 124 Score = 118 bits (295), Expect = 1e-26 Identities = 61/108 (56%), Positives = 76/108 (70%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTREYTVNLHKRLHG FKK+AP AIKEIRKFA+K MGT DVR+D +LNK +WS G+ Sbjct: 15 NEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGV 74 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVE 157 RND+ED+ +L++LVT VP +KGL T+ V+ Sbjct: 75 RNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 120
>RL31_HELVI (Q9GP16) 60S ribosomal protein L31| Length = 124 Score = 118 bits (295), Expect = 1e-26 Identities = 61/108 (56%), Positives = 76/108 (70%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTREYTVNLHKRLHG FKK+AP AIKEIRKFA+K MGT DVR+D +LNK +WS G+ Sbjct: 15 NEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGV 74 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVE 157 RND+ED+ +L++LVT VP +KGL T+ V+ Sbjct: 75 RNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 120
>RL31_ICTPU (Q90YT7) 60S ribosomal protein L31| Length = 125 Score = 113 bits (282), Expect = 4e-25 Identities = 58/109 (53%), Positives = 75/109 (68%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTREYT+N+HKR+HG +FKK+AP AIKEIRKFA K MGT DVRID +LNK +W+ G+ Sbjct: 18 NEVVTREYTINVHKRIHGISFKKRAPRAIKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGV 77 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 154 RN++ED+ +LY+LVT VP KGL T V++ Sbjct: 78 RNVPYRMRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTYKGLQTVNVDE 124
>RL31_PAROL (Q9IA76) 60S ribosomal protein L31| Length = 124 Score = 112 bits (280), Expect = 6e-25 Identities = 59/109 (54%), Positives = 74/109 (67%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTREYT+N+HKR+HG FKK+AP AIKEIRKFA K MGT DVRID +LNK +WS G+ Sbjct: 17 NEVVTREYTINVHKRIHGVGFKKRAPRAIKEIRKFAVKEMGTPDVRIDTRLNKAVWSKGV 76 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 154 RN++ED+ +LY+LVT VP KGL T V++ Sbjct: 77 RNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTCKGLQTVNVDE 123
>RL31_DROME (Q9V597) 60S ribosomal protein L31| Length = 124 Score = 110 bits (274), Expect = 3e-24 Identities = 59/111 (53%), Positives = 72/111 (64%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTRE T++L KR+H FKK+AP AIKEIRKFA++ MGT DVRID +LNKHIWS GI Sbjct: 15 NEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGI 74 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 148 RND+ED+ +LY+ VT VP K L T+ VE D Sbjct: 75 RSTPFRIRVRLARRRNDDEDSPNKLYTYVTY--VPVSTFKNLQTENVESSD 123
>RL31_RAT (P62902) 60S ribosomal protein L31| Length = 125 Score = 110 bits (274), Expect = 3e-24 Identities = 57/109 (52%), Positives = 73/109 (66%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTREYT+N+HKR+HG FKK+AP A+KEIRKFA K MGT DVRID +LNK +W+ GI Sbjct: 18 NEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGI 77 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 154 RN++ED+ +LY+LVT VP K L T V++ Sbjct: 78 RNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
>RL31_PIG (P62901) 60S ribosomal protein L31| Length = 125 Score = 110 bits (274), Expect = 3e-24 Identities = 57/109 (52%), Positives = 73/109 (66%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTREYT+N+HKR+HG FKK+AP A+KEIRKFA K MGT DVRID +LNK +W+ GI Sbjct: 18 NEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGI 77 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 154 RN++ED+ +LY+LVT VP K L T V++ Sbjct: 78 RNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
>RL31_MOUSE (P62900) 60S ribosomal protein L31| Length = 125 Score = 110 bits (274), Expect = 3e-24 Identities = 57/109 (52%), Positives = 73/109 (66%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTREYT+N+HKR+HG FKK+AP A+KEIRKFA K MGT DVRID +LNK +W+ GI Sbjct: 18 NEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGI 77 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 154 RN++ED+ +LY+LVT VP K L T V++ Sbjct: 78 RNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
>RL31_HUMAN (P62899) 60S ribosomal protein L31| Length = 125 Score = 110 bits (274), Expect = 3e-24 Identities = 57/109 (52%), Positives = 73/109 (66%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTREYT+N+HKR+HG FKK+AP A+KEIRKFA K MGT DVRID +LNK +W+ GI Sbjct: 18 NEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGI 77 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 154 RN++ED+ +LY+LVT VP K L T V++ Sbjct: 78 RNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124
>RL31_XENLA (Q6NUH0) 60S ribosomal protein L31| Length = 125 Score = 108 bits (271), Expect = 7e-24 Identities = 57/109 (52%), Positives = 73/109 (66%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTREYT+N+HKR+HG FKK+AP A+KEIRKFA K M T DVRID +LNK +W+ GI Sbjct: 18 NEVVTREYTINIHKRIHGIGFKKRAPRALKEIRKFAVKEMRTPDVRIDTRLNKAVWAKGI 77 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 154 RN++ED+ +LY+LVT VP KGL T V++ Sbjct: 78 RNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTNYKGLQTVNVDE 124
>RL31_DROVI (O18602) 60S ribosomal protein L31| Length = 128 Score = 108 bits (270), Expect = 9e-24 Identities = 60/115 (52%), Positives = 73/115 (63%), Gaps = 4/115 (3%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTRE T++L KR+H FKK+AP AIKEIRKF ++ MGTNDVRID +LNKHIWS GI Sbjct: 15 NEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFTEREMGTNDVRIDTRLNKHIWSKGI 74 Query: 300 XXXXXXX----XXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 148 RND+ED+ +LY+LVT VP K L T+ VE D Sbjct: 75 SLRYRSTPFRVRVRLARRRNDDEDSPNKLYTLVTYVPVPT--FKNLQTENVESSD 127
>RL31_ASHGO (Q757D7) 60S ribosomal protein L31| Length = 114 Score = 105 bits (261), Expect = 1e-22 Identities = 56/110 (50%), Positives = 70/110 (63%) Frame = -3 Query: 477 EVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIX 298 +VVTREYT+NLHKRLHG TFKK+AP A+KEI+KFA+ MGT DVR+D +LN IW G+ Sbjct: 6 DVVTREYTINLHKRLHGVTFKKRAPRAVKEIKKFAKLHMGTEDVRLDPRLNTEIWKRGVK 65 Query: 297 XXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 148 RN+E+ A L+S V V KGL T VVE+E+ Sbjct: 66 GVPFRMRLRISRRRNEEDTAPPPLFSYVEPVVV--ASAKGLHTVVVEEEE 113
>RL31_YEAST (P04649) 60S ribosomal protein L31 (L34) (YL28)| Length = 112 Score = 105 bits (261), Expect = 1e-22 Identities = 56/109 (51%), Positives = 72/109 (66%) Frame = -3 Query: 477 EVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIX 298 +VVTREYT+NLHKRLHG +FKK+AP A+KEI+KFA+ MGT+DVR+ +LN+ IW G+ Sbjct: 5 DVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRGVK 64 Query: 297 XXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDE 151 RN+EEDAK L+S V V KGL T VVE++ Sbjct: 65 GVEYRLRLRISRKRNEEEDAKNPLFSYVEPVLV--ASAKGLQTVVVEED 111
>RL31_CANGA (Q6FWF4) 60S ribosomal protein L31| Length = 113 Score = 103 bits (257), Expect = 3e-22 Identities = 54/109 (49%), Positives = 71/109 (65%) Frame = -3 Query: 477 EVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIX 298 +VVTREYT+N+HKRLHG +FKK+AP A+KEI+KFA+ MGT DVR+ +LN+ IW G+ Sbjct: 6 DVVTREYTINMHKRLHGVSFKKRAPKAVKEIKKFAKLHMGTEDVRLAPELNQEIWKRGVK 65 Query: 297 XXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDE 151 RN+EE+AK L+S V V KGL T VVE++ Sbjct: 66 GVAFRLRLRISRKRNEEENAKNPLFSYVEPVFV--ASAKGLQTTVVEED 112
>RL31_AEDAE (Q9GN74) 60S ribosomal protein L31| Length = 124 Score = 102 bits (253), Expect = 8e-22 Identities = 55/111 (49%), Positives = 72/111 (64%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTRE T+NL++RLH +KK+AP A+K +RKFA+K MGTNDVRID +LNK +W GI Sbjct: 15 NEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDTRLNKALWHRGI 74 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 148 RND+ED+ +LY+LVT VP K L T+ VE + Sbjct: 75 RNPPFRIRVRLSRRRNDDEDSPNKLYTLVTY--VPVSTFKELQTENVESTE 123
>RL31_CAEEL (Q9U332) 60S ribosomal protein L31| Length = 122 Score = 96.3 bits (238), Expect = 5e-20 Identities = 52/111 (46%), Positives = 69/111 (62%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +EVVTREYT+++H R+ G KK+AP AI EI+KFA+ M TNDVR+D KLNK IWS GI Sbjct: 14 NEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNKFIWSKGI 73 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 148 RN++ED+ ++LY+L T VP GL V+ E+ Sbjct: 74 KNVPYRVRVRLSRRRNEDEDSAQKLYTLCTY--VPCTNFHGLTNVNVDSEE 122
>RL31_SCHPO (Q9URX6) 60S ribosomal protein L31| Length = 113 Score = 87.8 bits (216), Expect = 2e-17 Identities = 48/109 (44%), Positives = 68/109 (62%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 ++VVTR+YT+++HKRL+G +FKK+AP AIKEI FAQK M T +VR+D LNK +W GI Sbjct: 10 NQVVTRDYTIHMHKRLYGVSFKKRAPRAIKEIVAFAQKHMQTKEVRVDPSLNKEVWKRGI 69 Query: 300 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 154 R+DE+D + LY+ V +V ++ T VVE+ Sbjct: 70 RNVPHRLRLRLSRKRSDEDD--KALYTYVQAVDVANPKME---TTVVEE 113
>RL31_METJA (P54009) 50S ribosomal protein L31e| Length = 87 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/55 (40%), Positives = 34/55 (61%) Frame = -3 Query: 465 REYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 R YT+ L ++ K+AP AIK+I++F ++ M V+ID +LN+ IW GI Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGI 63
>RL31_METKA (Q8TUY4) 50S ribosomal protein L31e| Length = 86 Score = 42.0 bits (97), Expect = 0.001 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = -3 Query: 465 REYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 R YTV L + KK+AP A+K +R+F ++ M +VRI +N+ IW GI Sbjct: 8 RVYTVPL-RDAKKAPLKKRAPRAVKALRQFIERHMKAEEVRIGNDVNEKIWERGI 61
>RL31_METMP (Q6M155) 50S ribosomal protein L31e| Length = 83 Score = 38.9 bits (89), Expect = 0.009 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = -3 Query: 465 REYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 R YT+ L + K+AP AI+ IR+F +K M ++ V++D +N+ +W + Sbjct: 5 RIYTIPLRDVTNKSPTTKRAPRAIRAIREFLKKHMKSDIVKLDNTINEKVWERSL 59
>RL31_PYRFU (Q8U3S7) 50S ribosomal protein L31e| Length = 95 Score = 37.4 bits (85), Expect = 0.025 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = -3 Query: 414 KKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 K+AP A+K +R+F + +V ID K+N+ IW GI Sbjct: 26 KRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGI 63
>RL31_METTH (O27649) 50S ribosomal protein L31e| Length = 81 Score = 37.0 bits (84), Expect = 0.033 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = -3 Query: 411 KAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 +AP A+K +R+F K M + V++D +N+ +W GI Sbjct: 20 RAPKAVKIVREFLMKHMKADTVKLDESINEKLWERGI 56
>RL31_PYRAB (Q9UYI7) 50S ribosomal protein L31e| Length = 94 Score = 35.8 bits (81), Expect = 0.072 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = -3 Query: 414 KKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 K+AP A+K +R+F + +V I K+N+ IW GI Sbjct: 26 KRAPRAVKFVREFVARHAKAQEVIISTKVNEKIWERGI 63
>RL31_PYRHO (P58189) 50S ribosomal protein L31e| Length = 95 Score = 35.4 bits (80), Expect = 0.095 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = -3 Query: 414 KKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 301 K+AP A+K +R+F + +V I K+N+ IW GI Sbjct: 27 KRAPRAVKFVREFIARHAKAQEVIISTKVNEKIWERGI 64
>RL31_AERPE (Q9YD25) 50S ribosomal protein L31e| Length = 105 Score = 34.3 bits (77), Expect = 0.21 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = -3 Query: 459 YTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWS 310 Y VNL +R++ ++A A++ +R+F ++ ++V ID +LN +IWS Sbjct: 10 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWS 58
>RL31_ARCFU (O28213) 50S ribosomal protein L31e| Length = 88 Score = 33.9 bits (76), Expect = 0.28 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -3 Query: 474 VVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTN--DVRIDVKLNKHIWSSG 304 VV R Y++ L ++ +A A K +RKF + M +V+ID +N+ IW G Sbjct: 5 VVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERG 63
>RL31_METAC (Q8TIN3) 50S ribosomal protein L31e| Length = 89 Score = 32.3 bits (72), Expect = 0.80 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = -3 Query: 480 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRI--DVKLNKHIWSS 307 D V + YT+ L + + K+A A+ E+R F + M T V++ D +N+H+W Sbjct: 4 DMVKEQIYTIPL-REVRKVPAWKRANRAVIEVRGFLVRHMKTESVQVKLDKSINEHLWEK 62 Query: 306 G 304 G Sbjct: 63 G 63
>RL31_METMA (Q8PYQ4) 50S ribosomal protein L31e| Length = 93 Score = 31.6 bits (70), Expect = 1.4 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Frame = -3 Query: 492 GPRKDEVVTRE-YTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT--NDVRIDVKLNK 322 G D++V + YT+ L + + K+A A+KE+R F + M T V++D +N+ Sbjct: 3 GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61 Query: 321 HIWSSG 304 +W G Sbjct: 62 CLWEKG 67
>FOXP4_HUMAN (Q8IVH2) Forkhead box protein P4 (Fork head-related protein-like A)| Length = 680 Score = 31.2 bits (69), Expect = 1.8 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -2 Query: 517 DVGEEARPRPSQGRGGDPRVHRQPPQAPPRMYLQEEGTKCHQGDQEVCPEGHGN 356 DVG P PS G PR+ PPQ ++ ++EE + + Q P G N Sbjct: 607 DVGAPVEPLPSNGSSSPPRL--SPPQYSHQVQVKEEPAEAEEDRQPGPPLGAPN 658
>EMS_DROME (P18488) Homeotic protein empty spiracles| Length = 497 Score = 30.4 bits (67), Expect = 3.0 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 1/74 (1%) Frame = -2 Query: 490 PSQGRGGDPRVHRQPPQAPPRMYLQEEGTKCHQGDQEVCPEGHG-NK*CPHRR*AQQAHL 314 P G+ V PPQ PP G+ H + P HG PH + QQ HL Sbjct: 50 PQSPPPGERNVPGSPPQTPPATLTLIPGSPPH---HLMAPPAHGLPYPHPHAQQQQQQHL 106 Query: 313 EQRHQECPEESPCQ 272 + H P SP Q Sbjct: 107 QAPHPH-PHLSPAQ 119
>PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment)| Length = 174 Score = 30.4 bits (67), Expect = 3.0 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = -2 Query: 511 GEEARPRPSQGRGGDPRVHRQPP------QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK 353 G+ RP P +GGD + HR PP + PP+ Q +G H G E P GNK Sbjct: 115 GKPERPPP---QGGD-QSHRPPPPPGKPERPPPQGGDQSQGPPPHPGKPEGPPPQEGNK 169
>YBOX1_HUMAN (P67809) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 30.0 bits (66), Expect = 4.0 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Frame = -2 Query: 511 GEEARP-RPSQGRGGDPRVHRQPP-QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 338 GE+ RP R + RG PR R PP Q PR EE K +QGD E G + P R Sbjct: 226 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEE-DKENQGD-----ETQGQQ-PPQR 278 Query: 337 R*AQQAHLEQRHQECP-----EESPCQDCPQE 257 R + + +R E P +E+ D P E Sbjct: 279 RYRRNFNYRRRRPENPKPQDGKETKAADPPAE 310
>YBOX1_BOVIN (P67808) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 30.0 bits (66), Expect = 4.0 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Frame = -2 Query: 511 GEEARP-RPSQGRGGDPRVHRQPP-QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 338 GE+ RP R + RG PR R PP Q PR EE K +QGD E G + P R Sbjct: 226 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEE-DKENQGD-----ETQGQQ-PPQR 278 Query: 337 R*AQQAHLEQRHQECP-----EESPCQDCPQE 257 R + + +R E P +E+ D P E Sbjct: 279 RYRRNFNYRRRRPENPKPQDGKETKAADPPAE 310
>YBOX1_RAT (P62961) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 30.0 bits (66), Expect = 4.0 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Frame = -2 Query: 511 GEEARP-RPSQGRGGDPRVHRQPP-QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 338 GE+ RP R + RG PR R PP Q PR EE K +QGD E G + P R Sbjct: 224 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEE-DKENQGD-----ETQGQQ-PPQR 276 Query: 337 R*AQQAHLEQRHQECP-----EESPCQDCPQE 257 R + + +R E P +E+ D P E Sbjct: 277 RYRRNFNYRRRRPENPKPQDGKETKAADPPAE 308
>YBOX1_MOUSE (P62960) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 30.0 bits (66), Expect = 4.0 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Frame = -2 Query: 511 GEEARP-RPSQGRGGDPRVHRQPP-QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 338 GE+ RP R + RG PR R PP Q PR EE K +QGD E G + P R Sbjct: 224 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEE-DKENQGD-----ETQGQQ-PPQR 276 Query: 337 R*AQQAHLEQRHQECP-----EESPCQDCPQE 257 R + + +R E P +E+ D P E Sbjct: 277 RYRRNFNYRRRRPENPKPQDGKETKAADPPAE 308
>ZN592_MOUSE (Q8BHZ4) Zinc finger protein 592 (Zfp-592)| Length = 1262 Score = 29.6 bits (65), Expect = 5.2 Identities = 23/74 (31%), Positives = 34/74 (45%) Frame = -2 Query: 481 GRGGDPRVHRQPPQAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRH 302 GR G P HR+ +A PRM + G C Q QE P+ R + +H+++ H Sbjct: 961 GRWGRPEAHRRA-EARPRM--RSTGWTC-QECQEWVPD----------RESYVSHMKKSH 1006 Query: 301 QECPEESPCQDCPQ 260 + PC+ C Q Sbjct: 1007 GRTLKRYPCRQCEQ 1020
>PRB4M_HUMAN (P10161) Basic salivary proline-rich protein 4 allele M (Salivary| proline-rich protein Po) (Parotid o protein) [Contains: Peptide P-D] (Fragment) Length = 238 Score = 29.3 bits (64), Expect = 6.8 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = -2 Query: 511 GEEARPRPSQGRGGDPRVHRQPP------QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK 353 G+ RP P G + HR PP + PP+ Q +G H G E P GNK Sbjct: 109 GKPERPPPQGGN----QSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNK 163
>PRPH_MESAU (P06680) Acidic proline-rich protein HP43A precursor| Length = 183 Score = 29.3 bits (64), Expect = 6.8 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Frame = -2 Query: 511 GEEARPRPSQ--GRGGDPRVHRQPPQAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 338 G+ +PRP + + G P+ Q PP+ QE G +G Q+ P GN+ P + Sbjct: 75 GDHQKPRPPKPGNQQGPPQQEGQQQNRPPKPGNQE-GPPQQEGQQQNRPPKPGNQEGPPQ 133 Query: 337 R*AQQAHLEQR--HQECPEESPCQ 272 + QQ + + +QE P + Q Sbjct: 134 QEGQQQNRPPKPGNQEGPPQQEGQ 157
>APBA1_RAT (O35430) Amyloid beta A4 precursor protein-binding family A member| 1 (Neuron-specific X11 protein) (Neuronal Munc18-1-interacting protein 1) (Mint-1) (Adapter protein X11alpha) Length = 839 Score = 29.3 bits (64), Expect = 6.8 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = -2 Query: 517 DVGEEARPRPSQGRGGDP---RVHRQPPQAPPRMYLQEEGTKC 398 +V EE +P P G P R H PP PP +EE +C Sbjct: 33 EVEEEQQPSPPPPAGHAPEDHRAHPAPPPPPPPQEEEEERGEC 75
>YBOX1_CHICK (Q06066) Nuclease sensitive element-binding protein 1 (Y-box| binding protein 1) (Y-box transcription factor) Length = 321 Score = 29.3 bits (64), Expect = 6.8 Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Frame = -2 Query: 511 GEEARP-RPSQGRGGDPRVHRQPP-QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 338 GE+ RP R + RG PR R PP Q PR EE K +QGD E G + P R Sbjct: 224 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEE-DKENQGD-----ETQGQQ-PPQR 276 Query: 337 R*AQQAHLEQRHQECPE 287 R + + +R E P+ Sbjct: 277 RYRRNFNYRRRRPENPK 293
>PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allele S precursor| (Salivary proline-rich protein Po) (Parotid o protein) [Contains: Protein N1; Glycosylated protein A] Length = 247 Score = 29.3 bits (64), Expect = 6.8 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = -2 Query: 511 GEEARPRPSQGRGGDPRVHRQPP------QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK 353 G+ RP P G + HR PP + PP+ Q +G H G E P GNK Sbjct: 118 GKPERPPPQGGN----QSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNK 172
>PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allele L (Salivary| proline-rich protein Po) (Parotid o protein) [Contains: Peptide P-D] (Fragment) Length = 276 Score = 29.3 bits (64), Expect = 6.8 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = -2 Query: 511 GEEARPRPSQGRGGDPRVHRQPP------QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK 353 G+ RP P G + HR PP + PP+ Q +G H G E P GNK Sbjct: 147 GKPERPPPQGGN----QSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNK 201
>ZN592_HUMAN (Q92610) Zinc finger protein 592| Length = 1267 Score = 28.9 bits (63), Expect = 8.9 Identities = 23/74 (31%), Positives = 34/74 (45%) Frame = -2 Query: 481 GRGGDPRVHRQPPQAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRH 302 GR G P HR+ +A PR L+ G C Q QE P+ R + +H+++ H Sbjct: 961 GRWGRPEAHRRV-EARPR--LRNTGWTC-QECQEWVPD----------RESYVSHMKKSH 1006 Query: 301 QECPEESPCQDCPQ 260 + PC+ C Q Sbjct: 1007 GRTLKRYPCRQCEQ 1020
>RS3_AMBME (P79891) 40S ribosomal protein S3| Length = 253 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%) Frame = -2 Query: 487 SQGRGG--DPRVHRQPPQAPPRM 425 S+ +GG DP+V +QPPQ PP M Sbjct: 224 SEQKGGKPDPQVPQQPPQQPPAM 246 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,412,636 Number of Sequences: 219361 Number of extensions: 1157828 Number of successful extensions: 3627 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 3380 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3608 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
