| Clone Name | rbags37p03 |
|---|---|
| Clone Library Name | barley_pub |
>AA2DB_BRARE (Q8JG69) Alpha-2Db adrenergic receptor (Alpha-2Db adrenoceptor)| (Alpha-2Db adrenoreceptor) (Alpha(2Db)AR) Length = 415 Score = 28.5 bits (62), Expect = 4.9 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 121 LTCLLRTHTWFVYTLCPVSSFA 56 L CLL TW++ + C VS FA Sbjct: 177 LECLLNNETWYILSSCIVSFFA 198
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 28.1 bits (61), Expect = 6.4 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%) Frame = -2 Query: 218 VRVCVC--VCAWL*TCTYA*CSGCGCS 144 V VC C VC+W+ C+ C CG S Sbjct: 58 VPVCCCKPVCSWVPACSCTSCGSCGGS 84
>PTHB1_MOUSE (Q811G0) Protein PTHB1 (Parathyroid hormone-responsive B1 gene| protein homolog) Length = 885 Score = 27.7 bits (60), Expect = 8.4 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -2 Query: 143 FLAGTLGTYLPTTHSHMVCLYAVSG 69 F++GT +L HS +C+Y+VSG Sbjct: 86 FVSGTEMLHLAVLHSRKLCVYSVSG 110
>VEGFC_HUMAN (P49767) Vascular endothelial growth factor C precursor (VEGF-C)| (Vascular endothelial growth factor-related protein) (VRP) (Flt4 ligand) (Flt4-L) Length = 419 Score = 27.7 bits (60), Expect = 8.4 Identities = 8/23 (34%), Positives = 15/23 (65%) Frame = +1 Query: 40 PISSRSQSCSPDTAYKQTMCECV 108 P ++R ++C P +Y + +C CV Sbjct: 387 PCTNRQKACEPGFSYSEEVCRCV 409
>PTHB1_HUMAN (Q3SYG4) Protein PTHB1 (Parathyroid hormone-responsive B1 gene| protein) (Bardet-Biedl syndrome 9 protein) Length = 887 Score = 27.7 bits (60), Expect = 8.4 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -2 Query: 143 FLAGTLGTYLPTTHSHMVCLYAVSG 69 F++GT +L HS +C+Y+VSG Sbjct: 86 FVSGTEMLHLAVLHSRKLCVYSVSG 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,363,443 Number of Sequences: 219361 Number of extensions: 390649 Number of successful extensions: 833 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 806 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 829 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)